Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-05-10 00:33:12,301 [ scc.config] DEBUG Found github.token
2024-05-10 00:33:12,304 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-05-10 00:33:12,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:33:12,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:33:13,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-05-10 00:33:13,387 [ scc.gh] DEBUG 4998 remaining from 5000 (Reset at 01:05
2024-05-10 00:33:13,389 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-10 00:33:13,393 [ scc.git] DEBUG Check current status
2024-05-10 00:33:13,394 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-10 00:33:13,397 [ scc.git] DEBUG ee4b0ba Merge pull request #278 from ome/dependabot/submodules/omero-py-53a327b
2024-05-10 00:33:13,398 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-10 00:33:13,440 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-10 00:33:13,443 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-10 00:33:13,446 [ scc.git] DEBUG 53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-10 00:33:13,450 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-10 00:33:13,454 [ scc.git] DEBUG e1b1355ebd4f9de8b855dd2c55f59d86c061a81b omero-web (v5.25.0-9-ge1b1355eb)
2024-05-10 00:33:13,458 [ scc.config] DEBUG Found remote.origin.url
2024-05-10 00:33:13,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-05-10 00:33:14,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-10 00:33:14,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-10 00:33:15,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-10 00:33:15,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-10 00:33:15,609 [ scc.git] DEBUG Resetting...
2024-05-10 00:33:15,609 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-05-10 00:33:15,616 [ scc.git] DEBUG HEAD is now at ee4b0ba Merge pull request #278 from ome/dependabot/submodules/omero-py-53a327b
2024-05-10 00:33:15,617 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-05-10 00:33:15,671 [ scc.git] DEBUG Check current status
2024-05-10 00:33:15,671 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-10 00:33:15,676 [ scc.git] DEBUG ee4b0ba Merge pull request #278 from ome/dependabot/submodules/omero-py-53a327b
2024-05-10 00:33:15,676 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-10 00:33:15,718 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-10 00:33:15,721 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-10 00:33:15,725 [ scc.git] DEBUG 53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-10 00:33:15,729 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-10 00:33:15,733 [ scc.git] DEBUG e1b1355ebd4f9de8b855dd2c55f59d86c061a81b omero-web (v5.25.0-9-ge1b1355eb)
2024-05-10 00:33:15,734 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-05-10 00:33:15,735 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-05-10 00:33:15,735 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-05-10 00:33:15,735 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-05-10 00:33:15,735 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-05-10 00:33:15,735 [ scc.repo] DEBUG ## PRs found:
2024-05-10 00:33:16,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-05-10 00:33:16,057 [ scc.repo] DEBUG ## Branches found:
2024-05-10 00:33:16,057 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:33:16,057 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:33:16,061 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-10 00:33:16,066 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-10 00:33:16,066 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-10 00:33:16,071 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-10 00:33:16,076 [ scc.git] DEBUG Already up to date.
2024-05-10 00:33:16,076 [ scc.git] DEBUG ## Unique users: []
2024-05-10 00:33:16,076 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:33:16,076 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:33:16,079 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-10 00:33:16,124 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:33:16,124 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:33:16,129 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-10 00:33:16,344 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8bad19460> has no local changes
2024-05-10 00:33:16,344 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Generated by OMERO-python-superbuild-push#57 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/57/)'
2024-05-10 00:33:16,368 [ scc.git] DEBUG [detached HEAD 7433763] merge master -Dorg -Snone
2024-05-10 00:33:16,369 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-05-10 00:33:16,369 [ scc.merge] INFO Already up to date.
2024-05-10 00:33:16,369 [ scc.merge] INFO
2024-05-10 00:33:16,369 [ scc.merge] INFO
2024-05-10 00:33:16,369 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-05-10 00:33:16,369 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-05-10 00:33:18,818 [ scc.config] DEBUG Found github.token
2024-05-10 00:33:18,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-05-10 00:33:19,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:33:19,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:33:19,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-05-10 00:33:19,873 [ scc.gh] DEBUG 4990 remaining from 5000 (Reset at 01:05
2024-05-10 00:33:19,874 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-10 00:33:19,878 [ scc.git] DEBUG Check current status
2024-05-10 00:33:19,878 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-10 00:33:19,882 [ scc.git] DEBUG 7433763 merge master -Dorg -Snone
2024-05-10 00:33:19,882 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-10 00:33:19,924 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-10 00:33:19,927 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-10 00:33:19,930 [ scc.git] DEBUG 53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-10 00:33:19,935 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-10 00:33:19,938 [ scc.git] DEBUG e1b1355ebd4f9de8b855dd2c55f59d86c061a81b omero-web (v5.25.0-9-ge1b1355eb)
2024-05-10 00:33:19,943 [ scc.config] DEBUG Found remote.origin.url
2024-05-10 00:33:19,943 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-05-10 00:33:19,945 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-05-10 00:33:20,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-05-10 00:33:20,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-10 00:33:21,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-10 00:33:21,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-10 00:33:22,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-10 00:33:22,055 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-10 00:33:22,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-05-10 00:33:22,101 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-10 00:33:22,106 [ scc.git] DEBUG Check current status
2024-05-10 00:33:22,106 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-10 00:33:22,110 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-05-10 00:33:22,110 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-10 00:33:22,154 [ scc.config] DEBUG Found remote.origin.url
2024-05-10 00:33:22,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-05-10 00:33:23,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-10 00:33:23,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-10 00:33:23,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-10 00:33:24,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-10 00:33:24,249 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-10 00:33:24,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-10 00:33:24,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-05-10 00:33:24,292 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-10 00:33:24,296 [ scc.git] DEBUG Check current status
2024-05-10 00:33:24,296 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-10 00:33:24,300 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-05-10 00:33:24,301 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-10 00:33:24,347 [ scc.config] DEBUG Found remote.origin.url
2024-05-10 00:33:24,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-05-10 00:33:25,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-10 00:33:25,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-10 00:33:26,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-10 00:33:26,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-10 00:33:26,493 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-10 00:33:26,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-10 00:33:26,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-05-10 00:33:26,533 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-10 00:33:26,536 [ scc.git] DEBUG Check current status
2024-05-10 00:33:26,536 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-10 00:33:26,558 [ scc.git] DEBUG 53a327b8 Merge pull request #407 from jburel/install_conda_forge
2024-05-10 00:33:26,558 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-10 00:33:26,598 [ scc.config] DEBUG Found remote.origin.url
2024-05-10 00:33:26,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-05-10 00:33:27,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-10 00:33:27,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-10 00:33:28,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-10 00:33:28,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-10 00:33:28,708 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-10 00:33:28,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-10 00:33:28,751 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-05-10 00:33:28,751 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-10 00:33:28,755 [ scc.git] DEBUG Check current status
2024-05-10 00:33:28,755 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-10 00:33:28,780 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-05-10 00:33:28,781 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-10 00:33:28,828 [ scc.config] DEBUG Found remote.origin.url
2024-05-10 00:33:28,829 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-05-10 00:33:29,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-05-10 00:33:29,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-10 00:33:30,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-10 00:33:30,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-10 00:33:30,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-10 00:33:30,864 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-10 00:33:30,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-10 00:33:30,911 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-05-10 00:33:30,911 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-10 00:33:30,915 [ scc.git] DEBUG Check current status
2024-05-10 00:33:30,915 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-10 00:33:30,920 [ scc.git] DEBUG e1b1355eb Merge pull request #540 from will-moore/django_template_context_processors_request
2024-05-10 00:33:30,921 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-10 00:33:30,965 [ scc.config] DEBUG Found remote.origin.url
2024-05-10 00:33:31,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-05-10 00:33:31,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-10 00:33:32,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-10 00:33:32,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-10 00:33:33,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-10 00:33:33,078 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-10 00:33:33,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-10 00:33:33,120 [ scc.git] DEBUG Resetting...
2024-05-10 00:33:33,120 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-05-10 00:33:33,126 [ scc.git] DEBUG HEAD is now at 7433763 merge master -Dorg -Snone
2024-05-10 00:33:33,127 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-05-10 00:33:33,179 [ scc.git] DEBUG Check current status
2024-05-10 00:33:33,179 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-10 00:33:33,183 [ scc.git] DEBUG 7433763 merge master -Dorg -Snone
2024-05-10 00:33:33,183 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-10 00:33:33,224 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-10 00:33:33,227 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-10 00:33:33,231 [ scc.git] DEBUG 53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-10 00:33:33,235 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-10 00:33:33,238 [ scc.git] DEBUG e1b1355ebd4f9de8b855dd2c55f59d86c061a81b omero-web (v5.25.0-9-ge1b1355eb)
2024-05-10 00:33:33,239 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-05-10 00:33:33,239 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-05-10 00:33:33,239 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-05-10 00:33:33,239 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-05-10 00:33:33,239 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-05-10 00:33:33,239 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-05-10 00:33:33,239 [ scc.repo] DEBUG ## PRs found:
2024-05-10 00:33:33,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-05-10 00:33:33,507 [ scc.repo] DEBUG ## Branches found:
2024-05-10 00:33:33,507 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:33:33,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:33:33,511 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-10 00:33:33,515 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-10 00:33:33,515 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-10 00:33:33,519 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-10 00:33:33,523 [ scc.git] DEBUG Already up to date.
2024-05-10 00:33:33,524 [ scc.git] DEBUG ## Unique users: []
2024-05-10 00:33:33,524 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:33:33,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:33:33,528 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-10 00:33:33,568 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:33:33,569 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:33:33,573 [ scc.repo] DEBUG ## PRs found:
2024-05-10 00:33:34,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-05-10 00:33:34,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-05-10 00:33:34,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-05-10 00:33:35,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-05-10 00:33:35,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:33:36,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-05-10 00:33:36,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-05-10 00:33:36,878 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-05-10 00:33:36,878 [ scc.repo] DEBUG ## Branches found:
2024-05-10 00:33:36,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-05-10 00:33:36,879 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:33:36,879 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:33:36,884 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-10 00:33:36,888 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-10 00:33:36,888 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-10 00:33:36,893 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-10 00:33:36,897 [ scc.git] DEBUG Already up to date.
2024-05-10 00:33:36,897 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-05-10 00:33:37,330 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-05-10 00:33:37,330 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-05-10 00:33:37,335 [ scc.git] DEBUG ## Unique users: []
2024-05-10 00:33:37,335 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:33:37,335 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:33:37,339 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-05-10 00:33:37,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:33:37,349 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-05-10 00:33:37,531 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-05-10 00:33:37,532 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-05-10 00:33:37,532 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-05-10 00:33:37,532 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-05-10 00:33:37,532 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-05-10 00:33:37,532 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-05-10 00:33:37,532 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-05-10 00:33:37,532 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-05-10 00:33:37,532 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-05-10 00:33:37,533 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-10 00:33:37,537 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-05-10 00:33:37,537 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-05-10 00:33:37,537 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-05-10 00:33:37,537 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-05-10 00:33:37,537 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-05-10 00:33:37,537 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-05-10 00:33:37,537 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-05-10 00:33:37,537 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-05-10 00:33:37,537 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-05-10 00:33:37,537 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-05-10 00:33:37,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:33:37,695 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-10 00:33:37,735 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:33:37,736 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:33:37,740 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-10 00:33:37,778 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-10 00:33:37,784 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b11b8fc40> has no local changes
2024-05-10 00:33:37,784 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#57 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/57/)'
2024-05-10 00:33:37,792 [ scc.git] DEBUG [detached HEAD 1b29ed7] merge master -Dorg -Ssuccess-only
2024-05-10 00:33:37,792 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-10 00:33:37,792 [ scc.repo] DEBUG ## PRs found:
2024-05-10 00:33:38,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-05-10 00:33:38,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-05-10 00:33:39,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-05-10 00:33:39,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-05-10 00:33:40,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:33:40,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-10 00:33:41,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-05-10 00:33:41,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-05-10 00:33:41,555 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-05-10 00:33:42,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-05-10 00:33:42,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-05-10 00:33:42,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-05-10 00:33:43,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-05-10 00:33:43,387 [ scc.repo] DEBUG ## Branches found:
2024-05-10 00:33:43,388 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-05-10 00:33:43,388 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:33:43,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:33:43,393 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-10 00:33:43,397 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-10 00:33:43,397 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-10 00:33:43,402 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-10 00:33:43,406 [ scc.git] DEBUG Already up to date.
2024-05-10 00:33:43,406 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-05-10 00:33:43,830 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-05-10 00:33:43,830 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-05-10 00:33:43,834 [ scc.git] DEBUG ## Unique users: []
2024-05-10 00:33:43,834 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:33:43,834 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:33:43,839 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-05-10 00:33:43,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:33:43,848 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-05-10 00:33:43,879 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-05-10 00:33:43,880 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-10 00:33:43,883 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-05-10 00:33:43,883 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-05-10 00:33:43,883 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-05-10 00:33:44,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:33:44,043 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-10 00:33:44,084 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:33:44,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:33:44,090 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-10 00:33:44,130 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-10 00:33:44,136 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b11bfe340> has no local changes
2024-05-10 00:33:44,136 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#57 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/57/)'
2024-05-10 00:33:44,145 [ scc.git] DEBUG [detached HEAD 655accf] merge master -Dorg -Ssuccess-only
2024-05-10 00:33:44,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-10 00:33:44,146 [ scc.repo] DEBUG ## PRs found:
2024-05-10 00:33:44,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-05-10 00:33:45,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-05-10 00:33:45,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-05-10 00:33:46,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-05-10 00:33:46,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:33:47,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-10 00:33:47,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-05-10 00:33:47,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-05-10 00:33:48,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-05-10 00:33:48,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-05-10 00:33:48,903 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-05-10 00:33:49,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-05-10 00:33:49,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-05-10 00:33:50,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-05-10 00:33:50,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:33:51,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-10 00:33:51,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-05-10 00:33:52,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-05-10 00:33:52,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:33:53,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-10 00:33:53,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-05-10 00:33:54,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-05-10 00:33:54,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-05-10 00:33:55,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-05-10 00:33:55,095 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-05-10 00:33:55,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-05-10 00:33:55,568 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-05-10 00:33:56,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378 HTTP/1.1" 200 None
2024-05-10 00:33:56,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378/comments HTTP/1.1" 200 None
2024-05-10 00:33:56,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-05-10 00:33:57,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-05-10 00:33:57,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-05-10 00:33:58,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:33:58,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-05-10 00:33:59,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-05-10 00:33:59,267 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-05-10 00:33:59,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-05-10 00:34:00,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-05-10 00:34:00,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-05-10 00:34:01,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:01,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-10 00:34:02,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-05-10 00:34:02,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:03,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-05-10 00:34:03,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-05-10 00:34:03,588 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-05-10 00:34:04,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-05-10 00:34:04,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-05-10 00:34:04,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-05-10 00:34:05,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-05-10 00:34:05,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-05-10 00:34:06,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:06,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-05-10 00:34:07,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-05-10 00:34:07,363 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-05-10 00:34:07,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-05-10 00:34:08,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-05-10 00:34:08,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:09,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-05-10 00:34:09,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-05-10 00:34:09,633 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-05-10 00:34:10,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-05-10 00:34:10,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-05-10 00:34:11,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-05-10 00:34:11,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:12,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-05-10 00:34:12,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-05-10 00:34:12,467 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-05-10 00:34:12,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-05-10 00:34:13,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-05-10 00:34:13,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-05-10 00:34:14,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:14,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-05-10 00:34:15,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-05-10 00:34:15,317 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-05-10 00:34:15,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-05-10 00:34:16,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-05-10 00:34:16,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-05-10 00:34:17,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-05-10 00:34:17,186 [ scc.repo] DEBUG ## Branches found:
2024-05-10 00:34:17,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-05-10 00:34:17,186 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:34:17,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:34:17,191 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-10 00:34:17,196 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-10 00:34:17,196 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-10 00:34:17,201 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-10 00:34:17,206 [ scc.git] DEBUG Already up to date.
2024-05-10 00:34:17,206 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-05-10 00:34:17,817 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-10 00:34:17,817 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-05-10 00:34:17,822 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-05-10 00:34:18,229 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-10 00:34:18,229 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-05-10 00:34:18,234 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-05-10 00:34:18,645 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-10 00:34:18,645 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-05-10 00:34:18,649 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-05-10 00:34:19,035 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-10 00:34:19,035 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-05-10 00:34:19,040 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-05-10 00:34:19,445 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-10 00:34:19,445 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-05-10 00:34:19,451 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-05-10 00:34:19,851 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-10 00:34:19,851 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-05-10 00:34:19,856 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-05-10 00:34:20,293 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-10 00:34:20,294 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-05-10 00:34:20,299 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-05-10 00:34:20,668 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-10 00:34:20,668 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-05-10 00:34:20,673 [ scc.git] DEBUG ## Unique users: []
2024-05-10 00:34:20,673 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:34:20,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:34:20,678 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-05-10 00:34:20,690 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:34:20,696 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-05-10 00:34:20,728 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-05-10 00:34:20,728 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-05-10 00:34:20,729 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-10 00:34:20,733 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-05-10 00:34:20,734 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-05-10 00:34:20,734 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-05-10 00:34:20,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:34:20,893 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-05-10 00:34:20,905 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:34:20,910 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-05-10 00:34:21,047 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-05-10 00:34:21,048 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-05-10 00:34:21,048 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-10 00:34:21,056 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-05-10 00:34:21,056 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-05-10 00:34:21,056 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-05-10 00:34:21,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:34:21,307 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-05-10 00:34:21,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:34:21,322 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-05-10 00:34:21,425 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-05-10 00:34:21,426 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-10 00:34:21,429 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-05-10 00:34:21,429 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-05-10 00:34:21,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:34:21,717 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-05-10 00:34:21,729 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:34:21,734 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-05-10 00:34:21,757 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-05-10 00:34:21,757 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-05-10 00:34:21,758 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-10 00:34:21,762 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-05-10 00:34:21,762 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-05-10 00:34:21,762 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-05-10 00:34:22,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:34:22,199 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-05-10 00:34:22,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:34:22,215 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-05-10 00:34:22,257 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-10 00:34:22,260 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-05-10 00:34:22,260 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-05-10 00:34:22,260 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-05-10 00:34:22,260 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-05-10 00:34:22,260 [ scc.git] DEBUG create mode 100644 connect.py
2024-05-10 00:34:22,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:34:22,615 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-05-10 00:34:22,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:34:22,633 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-05-10 00:34:22,657 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-05-10 00:34:22,659 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-10 00:34:22,663 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-05-10 00:34:22,663 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-05-10 00:34:23,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:34:23,014 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-05-10 00:34:23,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:34:23,030 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-05-10 00:34:23,051 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-05-10 00:34:23,052 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-10 00:34:23,055 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-05-10 00:34:23,055 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-05-10 00:34:23,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:34:23,470 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-05-10 00:34:23,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:34:23,486 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-05-10 00:34:23,534 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-05-10 00:34:23,535 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-10 00:34:23,542 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-05-10 00:34:23,542 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-05-10 00:34:23,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:34:23,887 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-10 00:34:23,927 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:34:23,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:34:23,932 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-10 00:34:23,973 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-10 00:34:23,983 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b10b33820> has no local changes
2024-05-10 00:34:23,983 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
Generated by OMERO-python-superbuild-push#57 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/57/)'
2024-05-10 00:34:23,995 [ scc.git] DEBUG [detached HEAD f767c46f] merge master -Dorg -Ssuccess-only
2024-05-10 00:34:23,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-10 00:34:23,996 [ scc.git] INFO Overriding base-branch from master to develop
2024-05-10 00:34:23,996 [ scc.repo] DEBUG ## PRs found:
2024-05-10 00:34:24,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-05-10 00:34:24,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-05-10 00:34:25,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-05-10 00:34:25,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-05-10 00:34:26,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-05-10 00:34:26,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-05-10 00:34:27,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-05-10 00:34:27,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-05-10 00:34:28,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:28,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-05-10 00:34:29,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-05-10 00:34:29,310 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-05-10 00:34:29,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-05-10 00:34:30,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-05-10 00:34:30,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-05-10 00:34:31,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-05-10 00:34:31,350 [ scc.repo] DEBUG ## Branches found:
2024-05-10 00:34:31,350 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-05-10 00:34:31,351 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:34:31,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:34:31,355 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-05-10 00:34:31,360 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-10 00:34:31,361 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-05-10 00:34:31,366 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-05-10 00:34:31,372 [ scc.git] DEBUG Already up to date.
2024-05-10 00:34:31,372 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-05-10 00:34:31,851 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-05-10 00:34:31,851 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-05-10 00:34:31,856 [ scc.git] DEBUG ## Unique users: []
2024-05-10 00:34:31,856 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:34:31,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:34:31,861 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-05-10 00:34:31,868 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:34:31,873 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-05-10 00:34:31,927 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-05-10 00:34:31,928 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-05-10 00:34:31,928 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-05-10 00:34:31,928 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-05-10 00:34:31,933 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a'
2024-05-10 00:34:31,941 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-05-10 00:34:32,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:34:32,103 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-05-10 00:34:32,110 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a'
2024-05-10 00:34:32,114 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#57](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/57/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/57/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-05-10 00:34:32,118 [ scc.config] DEBUG Found github.token
2024-05-10 00:34:32,118 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-05-10 00:34:32,119 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-10 00:34:32,160 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:34:32,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:34:32,165 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-10 00:34:32,207 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-10 00:34:32,213 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b10b19670> has no local changes
2024-05-10 00:34:32,213 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#57 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/57/)'
2024-05-10 00:34:32,221 [ scc.git] DEBUG [detached HEAD ffb2601] merge master -Dorg -Ssuccess-only
2024-05-10 00:34:32,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-10 00:34:32,222 [ scc.repo] DEBUG ## PRs found:
2024-05-10 00:34:32,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-05-10 00:34:33,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/553 HTTP/1.1" 200 None
2024-05-10 00:34:33,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/549 HTTP/1.1" 200 None
2024-05-10 00:34:34,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/549/comments HTTP/1.1" 200 None
2024-05-10 00:34:34,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cdfac8b370264c2875799e26a2c49f31482124e6 HTTP/1.1" 200 None
2024-05-10 00:34:35,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cdfac8b370264c2875799e26a2c49f31482124e6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:35,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cdfac8b370264c2875799e26a2c49f31482124e6/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-10 00:34:36,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cdfac8b370264c2875799e26a2c49f31482124e6 HTTP/1.1" 200 None
2024-05-10 00:34:36,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/cdfac8b370264c2875799e26a2c49f31482124e6?per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:37,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cdfac8b370264c2875799e26a2c49f31482124e6 HTTP/1.1" 200 None
2024-05-10 00:34:37,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cdfac8b370264c2875799e26a2c49f31482124e6/status HTTP/1.1" 200 None
2024-05-10 00:34:37,500 [ scc.repo] DEBUG - PR 549 knabar 'Remove webgateway cache'
2024-05-10 00:34:37,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/543 HTTP/1.1" 200 None
2024-05-10 00:34:38,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/543/comments HTTP/1.1" 200 None
2024-05-10 00:34:38,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8481f4cb5c44e8f8ba676e6fcb6bd9f83419eea4 HTTP/1.1" 200 None
2024-05-10 00:34:39,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8481f4cb5c44e8f8ba676e6fcb6bd9f83419eea4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:39,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8481f4cb5c44e8f8ba676e6fcb6bd9f83419eea4/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-10 00:34:40,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8481f4cb5c44e8f8ba676e6fcb6bd9f83419eea4 HTTP/1.1" 200 None
2024-05-10 00:34:40,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8481f4cb5c44e8f8ba676e6fcb6bd9f83419eea4?per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:41,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8481f4cb5c44e8f8ba676e6fcb6bd9f83419eea4 HTTP/1.1" 200 None
2024-05-10 00:34:41,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8481f4cb5c44e8f8ba676e6fcb6bd9f83419eea4/status HTTP/1.1" 200 None
2024-05-10 00:34:41,787 [ scc.repo] DEBUG - PR 543 knabar 'Block UI for some long running tasks'
2024-05-10 00:34:42,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/542 HTTP/1.1" 200 None
2024-05-10 00:34:42,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/542/comments HTTP/1.1" 200 None
2024-05-10 00:34:42,751 [ scc.repo] DEBUG # ... Include label: include
2024-05-10 00:34:43,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/977f7b65169e6dee479197a9156993bbadd2d2e2 HTTP/1.1" 200 None
2024-05-10 00:34:43,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/977f7b65169e6dee479197a9156993bbadd2d2e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:44,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/977f7b65169e6dee479197a9156993bbadd2d2e2/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-10 00:34:44,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/977f7b65169e6dee479197a9156993bbadd2d2e2 HTTP/1.1" 200 None
2024-05-10 00:34:45,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/977f7b65169e6dee479197a9156993bbadd2d2e2?per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:45,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/977f7b65169e6dee479197a9156993bbadd2d2e2 HTTP/1.1" 200 None
2024-05-10 00:34:45,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/977f7b65169e6dee479197a9156993bbadd2d2e2/status HTTP/1.1" 200 None
2024-05-10 00:34:45,964 [ scc.repo] DEBUG - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display'
2024-05-10 00:34:46,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-05-10 00:34:46,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-05-10 00:34:47,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-05-10 00:34:47,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-05-10 00:34:48,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:49,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-10 00:34:49,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-05-10 00:34:49,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:50,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-05-10 00:34:50,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-05-10 00:34:50,898 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-05-10 00:34:51,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/533 HTTP/1.1" 200 None
2024-05-10 00:34:51,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/533/comments HTTP/1.1" 200 None
2024-05-10 00:34:52,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9a13dceec34523f81d5b6059c98b5ed05cada945 HTTP/1.1" 200 None
2024-05-10 00:34:52,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9a13dceec34523f81d5b6059c98b5ed05cada945/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:53,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9a13dceec34523f81d5b6059c98b5ed05cada945/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-10 00:34:53,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9a13dceec34523f81d5b6059c98b5ed05cada945 HTTP/1.1" 200 None
2024-05-10 00:34:54,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9a13dceec34523f81d5b6059c98b5ed05cada945?per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:54,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9a13dceec34523f81d5b6059c98b5ed05cada945 HTTP/1.1" 200 None
2024-05-10 00:34:55,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9a13dceec34523f81d5b6059c98b5ed05cada945/status HTTP/1.1" 200 None
2024-05-10 00:34:55,039 [ scc.repo] DEBUG - PR 533 jburel 'use conda-forge channel'
2024-05-10 00:34:55,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-05-10 00:34:55,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-05-10 00:34:56,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-05-10 00:34:57,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:57,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-10 00:34:57,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-05-10 00:34:58,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-05-10 00:34:58,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-05-10 00:34:59,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-05-10 00:34:59,341 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-05-10 00:34:59,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-05-10 00:35:00,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-05-10 00:35:00,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-05-10 00:35:01,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-10 00:35:01,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-10 00:35:01,853 [ scc.repo] DEBUG ## Branches found:
2024-05-10 00:35:01,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-05-10 00:35:01,853 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:35:01,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:35:01,859 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-10 00:35:01,864 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-10 00:35:01,864 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-10 00:35:01,870 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-10 00:35:01,876 [ scc.git] DEBUG Already up to date.
2024-05-10 00:35:01,877 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-05-10 00:35:02,265 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-05-10 00:35:02,265 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-05-10 00:35:02,270 [ scc.git] DEBUG Calling 'git fetch origin pull/533/head'
2024-05-10 00:35:02,661 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-05-10 00:35:02,662 [ scc.git] DEBUG * branch refs/pull/533/head -> FETCH_HEAD
2024-05-10 00:35:02,666 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-05-10 00:35:03,062 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-05-10 00:35:03,062 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-05-10 00:35:03,067 [ scc.git] DEBUG Calling 'git fetch origin pull/542/head'
2024-05-10 00:35:03,459 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-05-10 00:35:03,459 [ scc.git] DEBUG * branch refs/pull/542/head -> FETCH_HEAD
2024-05-10 00:35:03,466 [ scc.git] DEBUG Calling 'git fetch origin pull/543/head'
2024-05-10 00:35:03,849 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-05-10 00:35:03,850 [ scc.git] DEBUG * branch refs/pull/543/head -> FETCH_HEAD
2024-05-10 00:35:03,856 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head'
2024-05-10 00:35:04,263 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-05-10 00:35:04,263 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD
2024-05-10 00:35:04,268 [ scc.git] DEBUG ## Unique users: []
2024-05-10 00:35:04,268 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:35:04,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:35:04,273 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-05-10 00:35:04,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:35:04,286 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-05-10 00:35:04,331 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-05-10 00:35:04,332 [ scc.git] DEBUG Auto-merging setup.py
2024-05-10 00:35:04,336 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-10 00:35:04,343 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-05-10 00:35:04,343 [ scc.git] DEBUG setup.py | 1 +
2024-05-10 00:35:04,343 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-05-10 00:35:04,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:35:04,503 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9a13dceec34523f81d5b6059c98b5ed05cada945'
2024-05-10 00:35:04,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:35:04,516 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 533 (use conda-forge channel) 9a13dceec34523f81d5b6059c98b5ed05cada945'
2024-05-10 00:35:04,536 [ scc.git] DEBUG Auto-merging README.rst
2024-05-10 00:35:04,538 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-10 00:35:04,542 [ scc.git] DEBUG README.rst | 5 ++---
2024-05-10 00:35:04,542 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 3 deletions(-)
2024-05-10 00:35:04,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:35:04,919 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-05-10 00:35:04,927 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:35:04,932 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-05-10 00:35:04,993 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-05-10 00:35:04,994 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-05-10 00:35:04,994 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-10 00:35:04,999 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-05-10 00:35:04,999 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-05-10 00:35:04,999 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-05-10 00:35:05,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:35:05,322 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...977f7b65169e6dee479197a9156993bbadd2d2e2'
2024-05-10 00:35:05,330 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:35:05,334 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 542 (PlateAcquisition filtering with plate display) 977f7b65169e6dee479197a9156993bbadd2d2e2'
2024-05-10 00:35:05,504 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2024-05-10 00:35:05,505 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-10 00:35:05,513 [ scc.git] DEBUG .../data/includes/center_plugin.thumbs.js.html | 13 +++-------
2024-05-10 00:35:05,513 [ scc.git] DEBUG .../webclient/templates/webclient/data/plate.html | 10 ++++----
2024-05-10 00:35:05,513 [ scc.git] DEBUG omeroweb/webclient/views.py | 17 ++++++++++++
2024-05-10 00:35:05,513 [ scc.git] DEBUG omeroweb/webgateway/plategrid.py | 30 +++++++++++++++++++---
2024-05-10 00:35:05,513 [ scc.git] DEBUG .../static/webgateway/js/ome.plateview.js | 16 +++++++-----
2024-05-10 00:35:05,513 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 2 +-
2024-05-10 00:35:05,513 [ scc.git] DEBUG omeroweb/webgateway/views.py | 16 ++++++++++--
2024-05-10 00:35:05,513 [ scc.git] DEBUG 7 files changed, 78 insertions(+), 26 deletions(-)
2024-05-10 00:35:05,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:35:05,725 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8481f4cb5c44e8f8ba676e6fcb6bd9f83419eea4'
2024-05-10 00:35:05,734 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:35:05,740 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 543 (Block UI for some long running tasks) 8481f4cb5c44e8f8ba676e6fcb6bd9f83419eea4'
2024-05-10 00:35:05,908 [ scc.git] DEBUG Auto-merging omeroweb/webclient/templates/webclient/data/includes/center_plugin.thumbs.js.html
2024-05-10 00:35:05,910 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-10 00:35:05,916 [ scc.git] DEBUG .../webclient/javascript/ome.progress_overlay.js | 60 ++++++
2024-05-10 00:35:05,917 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 112 +++++++-----
2024-05-10 00:35:05,917 [ scc.git] DEBUG .../webclient/annotations/metadata_preview.html | 51 +++---
2024-05-10 00:35:05,917 [ scc.git] DEBUG .../webclient/templates/webclient/base/base.html | 1 +
2024-05-10 00:35:05,917 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 +-
2024-05-10 00:35:05,917 [ scc.git] DEBUG .../data/includes/center_plugin.thumbs.js.html | 16 +-
2024-05-10 00:35:05,917 [ scc.git] DEBUG .../static/webgateway/js/ome.gs_utils.js | 201 ---------------------
2024-05-10 00:35:05,917 [ scc.git] DEBUG .../webgateway/static/webgateway/js/ome.popup.js | 1 -
2024-05-10 00:35:05,917 [ scc.git] DEBUG .../webgateway/static/webgateway/js/omero_image.js | 35 ++--
2024-05-10 00:35:05,917 [ scc.git] DEBUG 9 files changed, 186 insertions(+), 293 deletions(-)
2024-05-10 00:35:05,917 [ scc.git] DEBUG create mode 100644 omeroweb/webclient/static/webclient/javascript/ome.progress_overlay.js
2024-05-10 00:35:06,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:35:06,142 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cdfac8b370264c2875799e26a2c49f31482124e6'
2024-05-10 00:35:06,150 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:35:06,156 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Remove webgateway cache) cdfac8b370264c2875799e26a2c49f31482124e6'
2024-05-10 00:35:06,188 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-05-10 00:35:06,188 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2024-05-10 00:35:06,189 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-10 00:35:06,196 [ scc.git] DEBUG omeroweb/settings.py | 1 -
2024-05-10 00:35:06,196 [ scc.git] DEBUG omeroweb/webgateway/views.py | 118 +---
2024-05-10 00:35:06,197 [ scc.git] DEBUG omeroweb/webgateway/webgateway_cache.py | 1043 ----------------------------
2024-05-10 00:35:06,197 [ scc.git] DEBUG omeroweb/webgateway/webgateway_tempfile.py | 200 ++++++
2024-05-10 00:35:06,197 [ scc.git] DEBUG test/unit/test_webgateway.py | 271 +-------
2024-05-10 00:35:06,197 [ scc.git] DEBUG 5 files changed, 231 insertions(+), 1402 deletions(-)
2024-05-10 00:35:06,197 [ scc.git] DEBUG delete mode 100644 omeroweb/webgateway/webgateway_cache.py
2024-05-10 00:35:06,197 [ scc.git] DEBUG create mode 100644 omeroweb/webgateway/webgateway_tempfile.py
2024-05-10 00:35:06,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:35:06,561 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-10 00:35:06,609 [ scc.git] DEBUG Get sha1 of %s
2024-05-10 00:35:06,610 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-10 00:35:06,615 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-10 00:35:06,664 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-10 00:35:06,676 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b10b22af0> has no local changes
2024-05-10 00:35:06,677 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 553 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 533 jburel 'use conda-forge channel'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 542 Tom-TBT 'PlateAcquisition filtering with plate display'
- PR 543 knabar 'Block UI for some long running tasks'
- PR 549 knabar 'Remove webgateway cache'
Generated by OMERO-python-superbuild-push#57 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/57/)'
2024-05-10 00:35:06,689 [ scc.git] DEBUG [detached HEAD f6697cb0b] merge master -Dorg -Ssuccess-only
2024-05-10 00:35:06,690 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-10 00:35:06,690 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-10 00:35:06,751 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-05-10 00:35:06,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:35:06,986 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-05-10 00:35:07,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:35:07,399 [ scc.config] DEBUG Found submodule.omero-py.url
2024-05-10 00:35:07,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:35:07,863 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-05-10 00:35:08,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:35:08,281 [ scc.config] DEBUG Found submodule.omero-web.url
2024-05-10 00:35:08,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-10 00:35:08,680 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-10 00:35:08,714 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b11bd3520> has local changes
2024-05-10 00:35:08,714 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 553 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 533 jburel 'use conda-forge channel'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 542 Tom-TBT 'PlateAcquisition filtering with plate display'
- PR 543 knabar 'Block UI for some long running tasks'
- PR 549 knabar 'Remove webgateway cache'
Generated by OMERO-python-superbuild-push#57 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/57/)'
2024-05-10 00:35:08,727 [ scc.git] DEBUG [detached HEAD 4623797] merge master -Dorg -Ssuccess-only
2024-05-10 00:35:08,727 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-05-10 00:35:08,727 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-05-10 00:35:08,727 [ scc.merge] INFO Already up to date.
2024-05-10 00:35:08,727 [ scc.merge] INFO
2024-05-10 00:35:08,727 [ scc.merge] INFO
2024-05-10 00:35:08,727 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-05-10 00:35:08,727 [ scc.merge] INFO Already up to date.
2024-05-10 00:35:08,727 [ scc.merge] INFO
2024-05-10 00:35:08,727 [ scc.merge] INFO Merged PRs:
2024-05-10 00:35:08,727 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-05-10 00:35:08,727 [ scc.merge] INFO
2024-05-10 00:35:08,727 [ scc.merge] INFO Repository: ome/omero-marshal
2024-05-10 00:35:08,727 [ scc.merge] INFO Excluded PRs:
2024-05-10 00:35:08,727 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-05-10 00:35:08,727 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-05-10 00:35:08,728 [ scc.merge] INFO Already up to date.
2024-05-10 00:35:08,728 [ scc.merge] INFO
2024-05-10 00:35:08,728 [ scc.merge] INFO Merged PRs:
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-05-10 00:35:08,728 [ scc.merge] INFO
2024-05-10 00:35:08,728 [ scc.merge] INFO Repository: ome/omero-py
2024-05-10 00:35:08,728 [ scc.merge] INFO Excluded PRs:
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-05-10 00:35:08,728 [ scc.merge] INFO Already up to date.
2024-05-10 00:35:08,728 [ scc.merge] INFO
2024-05-10 00:35:08,728 [ scc.merge] INFO Merged PRs:
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-05-10 00:35:08,728 [ scc.merge] INFO
2024-05-10 00:35:08,728 [ scc.merge] INFO Repository: ome/omero-scripts
2024-05-10 00:35:08,728 [ scc.merge] INFO Excluded PRs:
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-05-10 00:35:08,728 [ scc.merge] INFO Already up to date.
2024-05-10 00:35:08,728 [ scc.merge] INFO
2024-05-10 00:35:08,728 [ scc.merge] INFO Conflicting PRs (not included):
2024-05-10 00:35:08,728 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-05-10 00:35:08,728 [ scc.merge] INFO
2024-05-10 00:35:08,728 [ scc.merge] INFO Repository: ome/omero-web
2024-05-10 00:35:08,729 [ scc.merge] INFO Excluded PRs:
2024-05-10 00:35:08,729 [ scc.merge] INFO - PR 553 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-05-10 00:35:08,729 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-05-10 00:35:08,729 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-05-10 00:35:08,729 [ scc.merge] INFO Already up to date.
2024-05-10 00:35:08,729 [ scc.merge] INFO
2024-05-10 00:35:08,729 [ scc.merge] INFO Merged PRs:
2024-05-10 00:35:08,729 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-05-10 00:35:08,729 [ scc.merge] INFO - PR 533 jburel 'use conda-forge channel'
2024-05-10 00:35:08,729 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-05-10 00:35:08,729 [ scc.merge] INFO - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display'
2024-05-10 00:35:08,729 [ scc.merge] INFO - PR 543 knabar 'Block UI for some long running tasks'
2024-05-10 00:35:08,729 [ scc.merge] INFO - PR 549 knabar 'Remove webgateway cache'
2024-05-10 00:35:08,729 [ scc.merge] INFO
2024-05-10 00:35:08,729 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-05-10 00:35:08,729 [ scc.git] DEBUG Calling 'git remote'
2024-05-10 00:35:08,735 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-05-10 00:35:08,735 [ scc.git] DEBUG Calling 'git remote'
2024-05-10 00:35:08,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-10 00:35:08,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-05-10 00:35:08,748 [ scc.git] DEBUG Calling 'git remote'
2024-05-10 00:35:08,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-10 00:35:08,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-05-10 00:35:08,762 [ scc.git] DEBUG Calling 'git remote'
2024-05-10 00:35:08,773 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-10 00:35:08,773 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-05-10 00:35:08,773 [ scc.git] DEBUG Calling 'git remote'
2024-05-10 00:35:08,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-10 00:35:08,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-05-10 00:35:08,780 [ scc.git] DEBUG Calling 'git remote'
2024-05-10 00:35:08,784 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 53a327b8
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 5a90893
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from e1b1355eb
nothing to commit, working tree clean
HEAD detached from ee4b0ba
nothing to commit, working tree clean
2024-05-10 00:35:38,671 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
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