![[Jenkins]](/jenkins/static/90204047/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 9 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 2c91b66fcaaca19a4efe830d3c0aa0e23e00537a (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 2c91b66fcaaca19a4efe830d3c0aa0e23e00537a # timeout=10 Commit message: "Merge pull request #268 from ome/dependabot/submodules/omero-scripts-2078ac7" > git rev-list --no-walk 2c91b66fcaaca19a4efe830d3c0aa0e23e00537a # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 6 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.2.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.10.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.6-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.21-py2.py3-none-any.whl.metadata (1.1 kB) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.2.0-py3-none-any.whl (350 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.31.0-py3-none-any.whl (62 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.10.0-py3-none-any.whl (33 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl (4.6 MB) Using cached idna-3.6-py3-none-any.whl (61 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.21-py2.py3-none-any.whl (118 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.2.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.5 future-1.0.0 idna-3.6 pycparser-2.21 pyjwt-2.8.0 pynacl-1.5.0 requests-2.31.0 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.10.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-03-20 09:51:47,424 [ scc.config] DEBUG Found github.token 2024-03-20 09:51:47,427 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-03-20 09:51:47,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:51:48,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:51:48,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-03-20 09:51:48,490 [ scc.gh] DEBUG 4093 remaining from 5000 (Reset at 10:03 2024-03-20 09:51:48,492 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-20 09:51:48,498 [ scc.git] DEBUG Check current status 2024-03-20 09:51:48,499 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-20 09:51:48,505 [ scc.git] DEBUG 2c91b66 Merge pull request #268 from ome/dependabot/submodules/omero-scripts-2078ac7 2024-03-20 09:51:48,505 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-20 09:51:48,551 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350) 2024-03-20 09:51:48,554 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-03-20 09:51:48,557 [ scc.git] DEBUG 0dc60bd67a5f9281e2063a0a3aeeaa119c14447d omero-py (v5.19.0-1-g0dc60bd6) 2024-03-20 09:51:48,561 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d omero-scripts (v5.8.0-1-g2078ac7) 2024-03-20 09:51:48,564 [ scc.git] DEBUG 99aebd2a6bc892db0ac38f791821f17886a59095 omero-web (v5.24.0-41-g99aebd2a6) 2024-03-20 09:51:48,572 [ scc.config] DEBUG Found remote.origin.url 2024-03-20 09:51:48,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-03-20 09:51:49,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-20 09:51:49,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-20 09:51:50,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-20 09:51:50,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-20 09:51:50,671 [ scc.git] DEBUG Resetting... 2024-03-20 09:51:50,671 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-03-20 09:51:50,678 [ scc.git] DEBUG HEAD is now at 2c91b66 Merge pull request #268 from ome/dependabot/submodules/omero-scripts-2078ac7 2024-03-20 09:51:50,679 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-03-20 09:51:50,734 [ scc.git] DEBUG Check current status 2024-03-20 09:51:50,734 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-20 09:51:50,739 [ scc.git] DEBUG 2c91b66 Merge pull request #268 from ome/dependabot/submodules/omero-scripts-2078ac7 2024-03-20 09:51:50,740 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-20 09:51:50,786 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350) 2024-03-20 09:51:50,788 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-03-20 09:51:50,792 [ scc.git] DEBUG 0dc60bd67a5f9281e2063a0a3aeeaa119c14447d omero-py (v5.19.0-1-g0dc60bd6) 2024-03-20 09:51:50,797 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d omero-scripts (v5.8.0-1-g2078ac7) 2024-03-20 09:51:50,800 [ scc.git] DEBUG 99aebd2a6bc892db0ac38f791821f17886a59095 omero-web (v5.24.0-41-g99aebd2a6) 2024-03-20 09:51:50,801 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-03-20 09:51:50,801 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-03-20 09:51:50,801 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-03-20 09:51:50,801 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-03-20 09:51:50,801 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-03-20 09:51:50,802 [ scc.repo] DEBUG ## PRs found: 2024-03-20 09:51:51,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2024-03-20 09:51:51,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/270 HTTP/1.1" 200 None 2024-03-20 09:51:51,624 [ scc.repo] DEBUG # ... Include label: dependencies 2024-03-20 09:51:51,624 [ scc.repo] DEBUG - PR 270 dependabot[bot] 'Bump omero-web from `99aebd2` to `bb3ae5c`' 2024-03-20 09:51:51,624 [ scc.repo] DEBUG ## Branches found: 2024-03-20 09:51:51,625 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:51:51,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:51:51,629 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-20 09:51:51,633 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-20 09:51:51,633 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-20 09:51:51,637 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-20 09:51:51,642 [ scc.git] DEBUG Already up to date. 2024-03-20 09:51:51,642 [ scc.git] DEBUG Calling 'git fetch origin pull/270/head' 2024-03-20 09:51:52,075 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2024-03-20 09:51:52,076 [ scc.git] DEBUG * branch refs/pull/270/head -> FETCH_HEAD 2024-03-20 09:51:52,081 [ scc.git] DEBUG ## Unique users: [] 2024-03-20 09:51:52,082 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:51:52,082 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:51:52,087 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d3af2a06292f694cb8a1fef3ae23cfa75d3c434b' 2024-03-20 09:51:52,092 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:51:52,097 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 270 (Bump omero-web from `99aebd2` to `bb3ae5c`) d3af2a06292f694cb8a1fef3ae23cfa75d3c434b' 2024-03-20 09:51:52,109 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-20 09:51:52,111 [ scc.git] DEBUG omero-web | 2 +- 2024-03-20 09:51:52,111 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-03-20 09:51:52,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:51:52,279 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-20 09:51:52,347 [ scc.git] DEBUG Submodule path 'omero-web': checked out 'bb3ae5cab33420ff9992e07de8614f5a5c0e234a' 2024-03-20 09:51:52,347 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:51:52,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:51:52,353 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-20 09:51:52,502 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc8463361f0> has no local changes 2024-03-20 09:51:52,503 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 270 dependabot[bot] 'Bump omero-web from `99aebd2` to `bb3ae5c`' Generated by OMERO-python-superbuild-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/6/)' 2024-03-20 09:51:52,552 [ scc.git] DEBUG [detached HEAD 4f43891] merge master -Dorg -Snone 2024-03-20 09:51:52,552 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-03-20 09:51:52,552 [ scc.merge] INFO Already up to date. 2024-03-20 09:51:52,552 [ scc.merge] INFO 2024-03-20 09:51:52,552 [ scc.merge] INFO Merged PRs: 2024-03-20 09:51:52,552 [ scc.merge] INFO - PR 270 dependabot[bot] 'Bump omero-web from `99aebd2` to `bb3ae5c`' 2024-03-20 09:51:52,552 [ scc.merge] INFO 2024-03-20 09:51:52,553 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-03-20 09:51:52,553 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-03-20 09:51:55,791 [ scc.config] DEBUG Found github.token 2024-03-20 09:51:55,794 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-03-20 09:51:56,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:51:56,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:51:56,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-03-20 09:51:56,874 [ scc.gh] DEBUG 4083 remaining from 5000 (Reset at 10:03 2024-03-20 09:51:56,875 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-20 09:51:56,880 [ scc.git] DEBUG Check current status 2024-03-20 09:51:56,880 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-20 09:51:56,884 [ scc.git] DEBUG 4f43891 merge master -Dorg -Snone 2024-03-20 09:51:56,885 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-20 09:51:56,924 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350) 2024-03-20 09:51:56,927 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-03-20 09:51:56,930 [ scc.git] DEBUG 0dc60bd67a5f9281e2063a0a3aeeaa119c14447d omero-py (v5.19.0-1-g0dc60bd6) 2024-03-20 09:51:56,934 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d omero-scripts (v5.8.0-1-g2078ac7) 2024-03-20 09:51:56,937 [ scc.git] DEBUG bb3ae5cab33420ff9992e07de8614f5a5c0e234a omero-web (v5.25.0-3-gbb3ae5cab) 2024-03-20 09:51:56,941 [ scc.config] DEBUG Found remote.origin.url 2024-03-20 09:51:56,942 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-03-20 09:51:56,943 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-03-20 09:51:57,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-03-20 09:51:57,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-20 09:51:58,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-20 09:51:58,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-20 09:51:59,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-20 09:51:59,086 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-20 09:51:59,133 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-03-20 09:51:59,133 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-20 09:51:59,137 [ scc.git] DEBUG Check current status 2024-03-20 09:51:59,137 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-20 09:51:59,142 [ scc.git] DEBUG 5863350 Merge pull request #22 from sbesson/python311 2024-03-20 09:51:59,143 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-20 09:51:59,189 [ scc.config] DEBUG Found remote.origin.url 2024-03-20 09:51:59,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2024-03-20 09:52:00,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-20 09:52:00,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-20 09:52:00,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-20 09:52:01,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-20 09:52:01,306 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-20 09:52:01,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-20 09:52:01,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-03-20 09:52:01,346 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-20 09:52:01,349 [ scc.git] DEBUG Check current status 2024-03-20 09:52:01,349 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-20 09:52:01,353 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312 2024-03-20 09:52:01,353 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-20 09:52:01,391 [ scc.config] DEBUG Found remote.origin.url 2024-03-20 09:52:01,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2024-03-20 09:52:02,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-20 09:52:02,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-20 09:52:03,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-20 09:52:03,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-20 09:52:03,640 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-20 09:52:03,676 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-20 09:52:03,677 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-03-20 09:52:03,677 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-20 09:52:03,680 [ scc.git] DEBUG Check current status 2024-03-20 09:52:03,680 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-20 09:52:03,684 [ scc.git] DEBUG 0dc60bd6 Bump version: 5.19.0 → 5.19.1.dev0 2024-03-20 09:52:03,684 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-20 09:52:03,721 [ scc.config] DEBUG Found remote.origin.url 2024-03-20 09:52:04,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2024-03-20 09:52:04,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-20 09:52:05,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-20 09:52:05,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-20 09:52:05,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-20 09:52:05,831 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-20 09:52:05,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-20 09:52:05,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-03-20 09:52:05,874 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-20 09:52:05,878 [ scc.git] DEBUG Check current status 2024-03-20 09:52:05,878 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-20 09:52:05,883 [ scc.git] DEBUG 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0 2024-03-20 09:52:05,883 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-20 09:52:05,926 [ scc.config] DEBUG Found remote.origin.url 2024-03-20 09:52:05,927 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-03-20 09:52:06,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2024-03-20 09:52:06,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-20 09:52:07,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-20 09:52:07,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-20 09:52:07,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-20 09:52:07,997 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-20 09:52:08,040 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-20 09:52:08,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-03-20 09:52:08,041 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-20 09:52:08,046 [ scc.git] DEBUG Check current status 2024-03-20 09:52:08,046 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-20 09:52:08,050 [ scc.git] DEBUG bb3ae5cab Merge pull request #544 from ome/pre-commit-ci-update-config 2024-03-20 09:52:08,051 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-20 09:52:08,092 [ scc.config] DEBUG Found remote.origin.url 2024-03-20 09:52:08,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2024-03-20 09:52:08,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-20 09:52:09,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-20 09:52:09,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-20 09:52:10,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-20 09:52:10,174 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-20 09:52:10,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-20 09:52:10,215 [ scc.git] DEBUG Resetting... 2024-03-20 09:52:10,215 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-03-20 09:52:10,221 [ scc.git] DEBUG HEAD is now at 4f43891 merge master -Dorg -Snone 2024-03-20 09:52:10,221 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-03-20 09:52:10,270 [ scc.git] DEBUG Check current status 2024-03-20 09:52:10,270 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-20 09:52:10,274 [ scc.git] DEBUG 4f43891 merge master -Dorg -Snone 2024-03-20 09:52:10,274 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-20 09:52:10,312 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350) 2024-03-20 09:52:10,315 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-03-20 09:52:10,319 [ scc.git] DEBUG 0dc60bd67a5f9281e2063a0a3aeeaa119c14447d omero-py (v5.19.0-1-g0dc60bd6) 2024-03-20 09:52:10,322 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d omero-scripts (v5.8.0-1-g2078ac7) 2024-03-20 09:52:10,326 [ scc.git] DEBUG bb3ae5cab33420ff9992e07de8614f5a5c0e234a omero-web (v5.25.0-3-gbb3ae5cab) 2024-03-20 09:52:10,327 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-03-20 09:52:10,327 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-03-20 09:52:10,327 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-03-20 09:52:10,327 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-03-20 09:52:10,327 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-03-20 09:52:10,327 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-03-20 09:52:10,327 [ scc.repo] DEBUG ## PRs found: 2024-03-20 09:52:10,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2024-03-20 09:52:11,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/270 HTTP/1.1" 200 None 2024-03-20 09:52:11,101 [ scc.repo] DEBUG # ... Include label: dependencies 2024-03-20 09:52:11,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/d3af2a06292f694cb8a1fef3ae23cfa75d3c434b HTTP/1.1" 200 None 2024-03-20 09:52:12,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/d3af2a06292f694cb8a1fef3ae23cfa75d3c434b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:52:12,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/d3af2a06292f694cb8a1fef3ae23cfa75d3c434b HTTP/1.1" 200 None 2024-03-20 09:52:13,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/d3af2a06292f694cb8a1fef3ae23cfa75d3c434b?per_page=1 HTTP/1.1" 200 2 2024-03-20 09:52:13,028 [ scc.repo] DEBUG - PR 270 dependabot[bot] 'Bump omero-web from `99aebd2` to `bb3ae5c`' 2024-03-20 09:52:13,028 [ scc.repo] DEBUG ## Branches found: 2024-03-20 09:52:13,028 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:52:13,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:52:13,033 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-20 09:52:13,036 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-20 09:52:13,036 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-20 09:52:13,040 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-20 09:52:13,045 [ scc.git] DEBUG Already up to date. 2024-03-20 09:52:13,045 [ scc.git] DEBUG Calling 'git fetch origin pull/270/head' 2024-03-20 09:52:13,494 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2024-03-20 09:52:13,494 [ scc.git] DEBUG * branch refs/pull/270/head -> FETCH_HEAD 2024-03-20 09:52:13,498 [ scc.git] DEBUG ## Unique users: [] 2024-03-20 09:52:13,499 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:52:13,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:52:13,503 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d3af2a06292f694cb8a1fef3ae23cfa75d3c434b' 2024-03-20 09:52:13,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:52:13,510 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 270 (Bump omero-web from `99aebd2` to `bb3ae5c`) d3af2a06292f694cb8a1fef3ae23cfa75d3c434b' 2024-03-20 09:52:13,514 [ scc.git] DEBUG Already up to date. 2024-03-20 09:52:13,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:52:13,679 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-20 09:52:13,723 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:52:13,723 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:52:13,728 [ scc.repo] DEBUG ## PRs found: 2024-03-20 09:52:14,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2024-03-20 09:52:14,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/23 HTTP/1.1" 200 None 2024-03-20 09:52:15,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/23/comments HTTP/1.1" 200 None 2024-03-20 09:52:15,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8 HTTP/1.1" 200 None 2024-03-20 09:52:16,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:52:16,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-20 09:52:17,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8 HTTP/1.1" 200 None 2024-03-20 09:52:17,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8?per_page=1 HTTP/1.1" 200 2 2024-03-20 09:52:17,415 [ scc.repo] DEBUG - PR 23 sbesson 'Remove python-future compatibility code' 2024-03-20 09:52:17,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2024-03-20 09:52:18,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2024-03-20 09:52:18,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-03-20 09:52:19,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:52:19,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-03-20 09:52:20,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2024-03-20 09:52:20,320 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-03-20 09:52:20,320 [ scc.repo] DEBUG ## Branches found: 2024-03-20 09:52:20,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-03-20 09:52:20,320 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:52:20,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:52:20,325 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-20 09:52:20,329 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-20 09:52:20,329 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-20 09:52:20,335 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-20 09:52:20,340 [ scc.git] DEBUG Already up to date. 2024-03-20 09:52:20,341 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2024-03-20 09:52:20,760 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-03-20 09:52:20,760 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2024-03-20 09:52:20,765 [ scc.git] DEBUG Calling 'git fetch origin pull/23/head' 2024-03-20 09:52:21,996 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-03-20 09:52:21,997 [ scc.git] DEBUG * branch refs/pull/23/head -> FETCH_HEAD 2024-03-20 09:52:21,999 [ scc.git] DEBUG ## Unique users: [] 2024-03-20 09:52:21,999 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:52:21,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:52:22,005 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-03-20 09:52:22,011 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:52:22,016 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-03-20 09:52:22,039 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-20 09:52:22,043 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2024-03-20 09:52:22,043 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2024-03-20 09:52:22,044 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2024-03-20 09:52:22,044 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2024-03-20 09:52:22,046 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2024-03-20 09:52:22,046 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2024-03-20 09:52:22,047 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2024-03-20 09:52:22,047 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2024-03-20 09:52:22,047 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2024-03-20 09:52:22,047 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2024-03-20 09:52:22,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:52:22,202 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8' 2024-03-20 09:52:22,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:52:22,213 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 23 (Remove python-future compatibility code) 9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8' 2024-03-20 09:52:22,231 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2024-03-20 09:52:22,231 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2024-03-20 09:52:22,231 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2024-03-20 09:52:22,231 [ scc.git] DEBUG Auto-merging src/fsLists.py 2024-03-20 09:52:22,231 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2024-03-20 09:52:22,231 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2024-03-20 09:52:22,231 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2024-03-20 09:52:22,231 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2024-03-20 09:52:22,231 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2024-03-20 09:52:22,231 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-20 09:52:22,237 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-03-20 09:52:22,237 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 6 +++-- 2024-03-20 09:52:22,238 [ scc.git] DEBUG .github/workflows/tox.yml | 5 ++-- 2024-03-20 09:52:22,238 [ scc.git] DEBUG Dockerfile | 32 ---------------------- 2024-03-20 09:52:22,238 [ scc.git] DEBUG setup.py | 2 +- 2024-03-20 09:52:22,238 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 1 - 2024-03-20 09:52:22,238 [ scc.git] DEBUG src/fsDirectory.py | 8 +----- 2024-03-20 09:52:22,238 [ scc.git] DEBUG src/fsDropBox.py | 8 +----- 2024-03-20 09:52:22,238 [ scc.git] DEBUG src/fsDropBoxMonitorClient.py | 11 +------- 2024-03-20 09:52:22,238 [ scc.git] DEBUG src/fsFileServer.py | 12 ++------- 2024-03-20 09:52:22,238 [ scc.git] DEBUG src/fsLists.py | 2 -- 2024-03-20 09:52:22,238 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 9 +------ 2024-03-20 09:52:22,238 [ scc.git] DEBUG src/fsMonitor.py | 2 -- 2024-03-20 09:52:22,238 [ scc.git] DEBUG src/fsMonitorServer.py | 8 +++--- 2024-03-20 09:52:22,238 [ scc.git] DEBUG src/fsNotificationScheduler.py | 3 --- 2024-03-20 09:52:22,238 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 21 +++++---------- 2024-03-20 09:52:22,238 [ scc.git] DEBUG src/fsUtil.py | 9 +++---- 2024-03-20 09:52:22,238 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 8 +----- 2024-03-20 09:52:22,238 [ scc.git] DEBUG test/conftest.py | 2 -- 2024-03-20 09:52:22,239 [ scc.git] DEBUG test/drivers.py | 17 +++--------- 2024-03-20 09:52:22,239 [ scc.git] DEBUG test/unit/test_drivers.py | 55 ++++++++++++++++---------------------- 2024-03-20 09:52:22,239 [ scc.git] DEBUG test/unit/test_monitor.py | 2 -- 2024-03-20 09:52:22,239 [ scc.git] DEBUG test/unit/test_replay.py | 8 +----- 2024-03-20 09:52:22,239 [ scc.git] DEBUG test/unit/test_state.py | 1 - 2024-03-20 09:52:22,239 [ scc.git] DEBUG tox.ini | 3 ++- 2024-03-20 09:52:22,239 [ scc.git] DEBUG 25 files changed, 59 insertions(+), 178 deletions(-) 2024-03-20 09:52:22,239 [ scc.git] DEBUG delete mode 100644 Dockerfile 2024-03-20 09:52:22,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:52:22,620 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-20 09:52:22,657 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:52:22,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:52:22,662 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-20 09:52:22,698 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-20 09:52:22,704 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f23181d44f0> has no local changes 2024-03-20 09:52:22,704 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' - PR 23 sbesson 'Remove python-future compatibility code' Generated by OMERO-python-superbuild-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/6/)' 2024-03-20 09:52:22,713 [ scc.git] DEBUG [detached HEAD c2546a1] merge master -Dorg -Ssuccess-only 2024-03-20 09:52:22,713 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-20 09:52:22,713 [ scc.repo] DEBUG ## PRs found: 2024-03-20 09:52:23,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2024-03-20 09:52:23,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2024-03-20 09:52:24,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2024-03-20 09:52:24,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-03-20 09:52:25,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:52:25,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-20 09:52:26,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-03-20 09:52:26,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2024-03-20 09:52:26,422 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2024-03-20 09:52:26,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2024-03-20 09:52:27,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2024-03-20 09:52:27,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2024-03-20 09:52:28,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2024-03-20 09:52:28,219 [ scc.repo] DEBUG ## Branches found: 2024-03-20 09:52:28,220 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-03-20 09:52:28,220 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:52:28,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:52:28,225 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-20 09:52:28,231 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-20 09:52:28,232 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-20 09:52:28,238 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-20 09:52:28,243 [ scc.git] DEBUG Already up to date. 2024-03-20 09:52:28,244 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2024-03-20 09:52:28,669 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2024-03-20 09:52:28,669 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2024-03-20 09:52:28,674 [ scc.git] DEBUG ## Unique users: [] 2024-03-20 09:52:28,674 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:52:28,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:52:28,679 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-03-20 09:52:28,685 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:52:28,691 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-03-20 09:52:28,703 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2024-03-20 09:52:28,703 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-20 09:52:28,706 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2024-03-20 09:52:28,707 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2024-03-20 09:52:28,707 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2024-03-20 09:52:28,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:52:28,876 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-20 09:52:28,916 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:52:28,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:52:28,920 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-20 09:52:28,957 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-20 09:52:28,963 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2318ec94c0> has no local changes 2024-03-20 09:52:28,964 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/6/)' 2024-03-20 09:52:28,973 [ scc.git] DEBUG [detached HEAD 986f906] merge master -Dorg -Ssuccess-only 2024-03-20 09:52:28,973 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-20 09:52:28,974 [ scc.repo] DEBUG ## PRs found: 2024-03-20 09:52:29,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2024-03-20 09:52:30,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/400 HTTP/1.1" 200 None 2024-03-20 09:52:30,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/400/comments HTTP/1.1" 200 None 2024-03-20 09:52:30,551 [ scc.repo] DEBUG # ... Exclude label: exclude 2024-03-20 09:52:30,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/398 HTTP/1.1" 200 None 2024-03-20 09:52:31,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bbf54d740f70baee1e5fd5d3fb396699af5095b3 HTTP/1.1" 200 None 2024-03-20 09:52:31,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bbf54d740f70baee1e5fd5d3fb396699af5095b3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:52:32,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bbf54d740f70baee1e5fd5d3fb396699af5095b3/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-20 09:52:32,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bbf54d740f70baee1e5fd5d3fb396699af5095b3 HTTP/1.1" 200 None 2024-03-20 09:52:33,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/bbf54d740f70baee1e5fd5d3fb396699af5095b3?per_page=1 HTTP/1.1" 200 None 2024-03-20 09:52:33,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bbf54d740f70baee1e5fd5d3fb396699af5095b3 HTTP/1.1" 200 None 2024-03-20 09:52:34,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bbf54d740f70baee1e5fd5d3fb396699af5095b3/status HTTP/1.1" 200 None 2024-03-20 09:52:34,295 [ scc.repo] DEBUG - PR 398 will-moore 'getGridSize() handles plates with no Wells' 2024-03-20 09:52:34,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2024-03-20 09:52:35,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2024-03-20 09:52:35,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2024-03-20 09:52:36,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:52:36,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-20 09:52:37,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/394 HTTP/1.1" 200 None 2024-03-20 09:52:37,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/394/comments HTTP/1.1" 200 None 2024-03-20 09:52:38,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2024-03-20 09:52:38,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-03-20 09:52:39,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:52:39,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-20 09:52:40,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-03-20 09:52:40,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2024-03-20 09:52:41,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-03-20 09:52:41,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2024-03-20 09:52:41,439 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2024-03-20 09:52:41,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2024-03-20 09:52:41,910 [ scc.repo] DEBUG # ... Exclude label: exclude 2024-03-20 09:52:42,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378 HTTP/1.1" 200 None 2024-03-20 09:52:42,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378/comments HTTP/1.1" 200 None 2024-03-20 09:52:43,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2024-03-20 09:52:43,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2024-03-20 09:52:44,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-03-20 09:52:44,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:52:45,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-03-20 09:52:45,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2024-03-20 09:52:45,658 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-03-20 09:52:46,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2024-03-20 09:52:46,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2024-03-20 09:52:47,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-03-20 09:52:47,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:52:48,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-20 09:52:48,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-03-20 09:52:48,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None 2024-03-20 09:52:49,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-03-20 09:52:49,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2024-03-20 09:52:49,833 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2024-03-20 09:52:50,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2024-03-20 09:52:50,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2024-03-20 09:52:51,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2024-03-20 09:52:51,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2024-03-20 09:52:52,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-03-20 09:52:52,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:52:53,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-03-20 09:52:53,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2 2024-03-20 09:52:53,478 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj' 2024-03-20 09:52:53,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None 2024-03-20 09:52:54,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-03-20 09:52:54,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:52:55,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-03-20 09:52:55,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2024-03-20 09:52:55,755 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-03-20 09:52:56,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None 2024-03-20 09:52:56,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None 2024-03-20 09:52:57,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-03-20 09:52:57,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:52:58,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-03-20 09:52:58,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2024-03-20 09:52:58,691 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2024-03-20 09:52:59,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2024-03-20 09:52:59,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2024-03-20 09:53:00,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-03-20 09:53:00,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:53:01,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-03-20 09:53:01,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2024-03-20 09:53:01,445 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2024-03-20 09:53:01,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2024-03-20 09:53:02,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2024-03-20 09:53:02,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2024-03-20 09:53:03,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2024-03-20 09:53:03,288 [ scc.repo] DEBUG ## Branches found: 2024-03-20 09:53:03,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-03-20 09:53:03,288 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:53:03,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:03,294 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-20 09:53:03,298 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-20 09:53:03,298 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-20 09:53:03,303 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-20 09:53:03,308 [ scc.git] DEBUG Already up to date. 2024-03-20 09:53:03,308 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2024-03-20 09:53:03,809 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-20 09:53:03,810 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2024-03-20 09:53:03,814 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2024-03-20 09:53:04,249 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-20 09:53:04,250 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2024-03-20 09:53:04,254 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2024-03-20 09:53:04,652 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-20 09:53:04,652 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2024-03-20 09:53:04,657 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2024-03-20 09:53:05,058 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-20 09:53:05,059 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2024-03-20 09:53:05,064 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2024-03-20 09:53:05,504 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-20 09:53:05,505 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2024-03-20 09:53:05,509 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2024-03-20 09:53:05,908 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-20 09:53:05,909 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2024-03-20 09:53:05,913 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-03-20 09:53:06,311 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-20 09:53:06,311 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-03-20 09:53:06,315 [ scc.git] DEBUG Calling 'git fetch origin pull/398/head' 2024-03-20 09:53:06,897 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-20 09:53:06,897 [ scc.git] DEBUG * branch refs/pull/398/head -> FETCH_HEAD 2024-03-20 09:53:06,899 [ scc.git] DEBUG ## Unique users: [] 2024-03-20 09:53:06,900 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:53:06,900 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:06,904 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-03-20 09:53:06,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:06,919 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-03-20 09:53:06,941 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2024-03-20 09:53:06,941 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2024-03-20 09:53:06,942 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-20 09:53:06,946 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2024-03-20 09:53:06,946 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2024-03-20 09:53:06,946 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2024-03-20 09:53:07,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:07,114 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-03-20 09:53:07,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:07,130 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-03-20 09:53:07,207 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-03-20 09:53:07,207 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2024-03-20 09:53:07,208 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-20 09:53:07,213 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2024-03-20 09:53:07,213 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2024-03-20 09:53:07,213 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2024-03-20 09:53:07,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:07,529 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-03-20 09:53:07,540 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:07,545 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-03-20 09:53:07,568 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2024-03-20 09:53:07,569 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-20 09:53:07,573 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2024-03-20 09:53:07,573 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2024-03-20 09:53:07,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:07,955 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2024-03-20 09:53:07,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:07,975 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2024-03-20 09:53:08,006 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2024-03-20 09:53:08,007 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2024-03-20 09:53:08,008 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-20 09:53:08,011 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2024-03-20 09:53:08,011 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2024-03-20 09:53:08,011 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2024-03-20 09:53:08,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:08,373 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-03-20 09:53:08,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:08,388 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-03-20 09:53:08,406 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-20 09:53:08,409 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2024-03-20 09:53:08,409 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2024-03-20 09:53:08,409 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2024-03-20 09:53:08,410 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2024-03-20 09:53:08,410 [ scc.git] DEBUG create mode 100644 connect.py 2024-03-20 09:53:08,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:08,784 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-03-20 09:53:08,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:08,799 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-03-20 09:53:08,817 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2024-03-20 09:53:08,818 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-20 09:53:08,821 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2024-03-20 09:53:08,821 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-03-20 09:53:09,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:09,186 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2024-03-20 09:53:09,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:09,200 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2024-03-20 09:53:09,233 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2024-03-20 09:53:09,235 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-20 09:53:09,239 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2024-03-20 09:53:09,239 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2024-03-20 09:53:09,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:09,599 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bbf54d740f70baee1e5fd5d3fb396699af5095b3' 2024-03-20 09:53:09,610 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:09,615 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 398 (getGridSize() handles plates with no Wells) bbf54d740f70baee1e5fd5d3fb396699af5095b3' 2024-03-20 09:53:09,655 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-03-20 09:53:09,656 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-20 09:53:09,663 [ scc.git] DEBUG src/omero/gateway/__init__.py | 6 +++++- 2024-03-20 09:53:09,663 [ scc.git] DEBUG 1 file changed, 5 insertions(+), 1 deletion(-) 2024-03-20 09:53:10,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:10,039 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-20 09:53:10,085 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:53:10,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:10,091 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-20 09:53:10,135 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-20 09:53:10,144 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2317144f40> has no local changes 2024-03-20 09:53:10,145 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 400 jburel 'Session ID and constructor' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 394 jo-mueller 'added `_repr_html_` method for `_ImageWrapper`' (user: jo-mueller) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 398 will-moore 'getGridSize() handles plates with no Wells' Generated by OMERO-python-superbuild-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/6/)' 2024-03-20 09:53:10,154 [ scc.git] DEBUG [detached HEAD 6c49d0bb] merge master -Dorg -Ssuccess-only 2024-03-20 09:53:10,154 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-20 09:53:10,154 [ scc.git] INFO Overriding base-branch from master to develop 2024-03-20 09:53:10,154 [ scc.repo] DEBUG ## PRs found: 2024-03-20 09:53:10,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-03-20 09:53:11,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-03-20 09:53:11,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-03-20 09:53:12,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-03-20 09:53:12,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-03-20 09:53:12,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-03-20 09:53:13,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-03-20 09:53:13,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-03-20 09:53:14,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:53:14,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-03-20 09:53:15,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-03-20 09:53:15,277 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-03-20 09:53:15,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-03-20 09:53:16,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-03-20 09:53:16,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-03-20 09:53:17,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-03-20 09:53:17,199 [ scc.repo] DEBUG ## Branches found: 2024-03-20 09:53:17,199 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-03-20 09:53:17,199 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:53:17,199 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:17,204 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-03-20 09:53:17,209 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-20 09:53:17,209 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-03-20 09:53:17,214 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-03-20 09:53:17,219 [ scc.git] DEBUG Already up to date. 2024-03-20 09:53:17,220 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-03-20 09:53:17,631 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-03-20 09:53:17,631 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-03-20 09:53:17,636 [ scc.git] DEBUG ## Unique users: [] 2024-03-20 09:53:17,636 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:53:17,636 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:17,641 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-03-20 09:53:17,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:17,653 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-03-20 09:53:17,664 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-03-20 09:53:17,665 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-03-20 09:53:17,665 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-03-20 09:53:17,665 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-03-20 09:53:17,670 [ scc.git] DEBUG Calling 'git reset --hard 2078ac72dbf11f2733e685000a274eff81c2ac2d' 2024-03-20 09:53:17,676 [ scc.git] DEBUG HEAD is now at 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0 2024-03-20 09:53:17,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:17,830 [ scc.git] DEBUG Calling 'git merge-base 2078ac72dbf11f2733e685000a274eff81c2ac2d 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-03-20 09:53:17,837 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..2078ac72dbf11f2733e685000a274eff81c2ac2d' 2024-03-20 09:53:17,841 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#6](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/6/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/6/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-03-20 09:53:17,845 [ scc.config] DEBUG Found github.token 2024-03-20 09:53:17,845 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-03-20 09:53:17,845 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-20 09:53:17,889 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:53:17,889 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:17,895 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-20 09:53:17,937 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-20 09:53:17,943 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2317133970> has no local changes 2024-03-20 09:53:17,943 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/6/)' 2024-03-20 09:53:17,952 [ scc.git] DEBUG [detached HEAD ce7b011] merge master -Dorg -Ssuccess-only 2024-03-20 09:53:17,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-20 09:53:17,953 [ scc.repo] DEBUG ## PRs found: 2024-03-20 09:53:18,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2024-03-20 09:53:18,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/543 HTTP/1.1" 200 None 2024-03-20 09:53:19,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/542 HTTP/1.1" 200 None 2024-03-20 09:53:19,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/542/comments HTTP/1.1" 200 None 2024-03-20 09:53:19,839 [ scc.repo] DEBUG # ... Include label: include 2024-03-20 09:53:20,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b17e4857626b254e866a393e59e09bd8564fab0a HTTP/1.1" 200 None 2024-03-20 09:53:20,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b17e4857626b254e866a393e59e09bd8564fab0a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:53:21,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b17e4857626b254e866a393e59e09bd8564fab0a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-20 09:53:21,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b17e4857626b254e866a393e59e09bd8564fab0a HTTP/1.1" 200 None 2024-03-20 09:53:22,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b17e4857626b254e866a393e59e09bd8564fab0a?per_page=1 HTTP/1.1" 200 None 2024-03-20 09:53:22,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b17e4857626b254e866a393e59e09bd8564fab0a HTTP/1.1" 200 None 2024-03-20 09:53:23,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b17e4857626b254e866a393e59e09bd8564fab0a/status HTTP/1.1" 200 None 2024-03-20 09:53:23,128 [ scc.repo] DEBUG - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' 2024-03-20 09:53:23,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/540 HTTP/1.1" 200 None 2024-03-20 09:53:24,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30 HTTP/1.1" 200 None 2024-03-20 09:53:24,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:53:25,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-20 09:53:25,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30 HTTP/1.1" 200 None 2024-03-20 09:53:26,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/ee785db51c334b1be62c14ab36414993a2319a30?per_page=1 HTTP/1.1" 200 None 2024-03-20 09:53:26,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30 HTTP/1.1" 200 None 2024-03-20 09:53:27,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30/status HTTP/1.1" 200 None 2024-03-20 09:53:27,044 [ scc.repo] DEBUG - PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES' 2024-03-20 09:53:27,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/536 HTTP/1.1" 200 None 2024-03-20 09:53:27,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/536/comments HTTP/1.1" 200 None 2024-03-20 09:53:28,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a41f2f47426759218ab74359c02a7126a10e6eb HTTP/1.1" 200 None 2024-03-20 09:53:28,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a41f2f47426759218ab74359c02a7126a10e6eb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:53:29,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a41f2f47426759218ab74359c02a7126a10e6eb/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-20 09:53:30,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a41f2f47426759218ab74359c02a7126a10e6eb HTTP/1.1" 200 None 2024-03-20 09:53:30,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8a41f2f47426759218ab74359c02a7126a10e6eb?per_page=1 HTTP/1.1" 200 None 2024-03-20 09:53:30,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a41f2f47426759218ab74359c02a7126a10e6eb HTTP/1.1" 200 None 2024-03-20 09:53:31,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a41f2f47426759218ab74359c02a7126a10e6eb/status HTTP/1.1" 200 None 2024-03-20 09:53:31,299 [ scc.repo] DEBUG - PR 536 will-moore 'imgData JSON with no stateful services' 2024-03-20 09:53:31,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2024-03-20 09:53:32,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2024-03-20 09:53:32,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2024-03-20 09:53:33,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-03-20 09:53:33,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:53:34,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-20 09:53:34,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-03-20 09:53:35,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2024-03-20 09:53:35,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-03-20 09:53:36,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2024-03-20 09:53:36,005 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-03-20 09:53:36,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/533 HTTP/1.1" 200 None 2024-03-20 09:53:36,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545 HTTP/1.1" 200 None 2024-03-20 09:53:37,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:53:37,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-20 09:53:38,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545 HTTP/1.1" 200 None 2024-03-20 09:53:38,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/e335980be1e7197826687f6c322a60c61b4aa545?per_page=1 HTTP/1.1" 200 None 2024-03-20 09:53:39,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545 HTTP/1.1" 200 None 2024-03-20 09:53:39,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545/status HTTP/1.1" 200 None 2024-03-20 09:53:39,708 [ scc.repo] DEBUG - PR 533 jburel 'use conda-forge channel' 2024-03-20 09:53:40,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2024-03-20 09:53:40,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2024-03-20 09:53:41,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-03-20 09:53:41,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:53:42,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-20 09:53:42,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-03-20 09:53:43,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None 2024-03-20 09:53:43,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-03-20 09:53:43,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None 2024-03-20 09:53:43,915 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2024-03-20 09:53:44,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/399 HTTP/1.1" 200 None 2024-03-20 09:53:44,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/225 HTTP/1.1" 200 None 2024-03-20 09:53:45,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/225/comments HTTP/1.1" 200 None 2024-03-20 09:53:45,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/200678050/issues/225/comments?page=2 HTTP/1.1" 200 None 2024-03-20 09:53:46,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2024-03-20 09:53:46,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2024-03-20 09:53:47,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/219d9e721304a4c46b4d73ef9ff3777549d69615 HTTP/1.1" 200 None 2024-03-20 09:53:47,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/219d9e721304a4c46b4d73ef9ff3777549d69615/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-20 09:53:48,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/219d9e721304a4c46b4d73ef9ff3777549d69615 HTTP/1.1" 200 None 2024-03-20 09:53:48,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/219d9e721304a4c46b4d73ef9ff3777549d69615?per_page=1 HTTP/1.1" 200 2 2024-03-20 09:53:48,828 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler' 2024-03-20 09:53:49,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/17 HTTP/1.1" 200 None 2024-03-20 09:53:49,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/17/comments HTTP/1.1" 200 None 2024-03-20 09:53:49,779 [ scc.repo] DEBUG ## Branches found: 2024-03-20 09:53:49,779 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-03-20 09:53:49,779 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:53:49,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:49,784 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-20 09:53:49,788 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-20 09:53:49,788 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-20 09:53:49,792 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-20 09:53:49,797 [ scc.git] DEBUG Already up to date. 2024-03-20 09:53:49,797 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head' 2024-03-20 09:53:50,406 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-20 09:53:50,407 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD 2024-03-20 09:53:50,411 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2024-03-20 09:53:50,884 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-20 09:53:50,884 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2024-03-20 09:53:50,888 [ scc.git] DEBUG Calling 'git fetch origin pull/533/head' 2024-03-20 09:53:51,277 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-20 09:53:51,277 [ scc.git] DEBUG * branch refs/pull/533/head -> FETCH_HEAD 2024-03-20 09:53:51,282 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2024-03-20 09:53:51,705 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-20 09:53:51,705 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2024-03-20 09:53:51,710 [ scc.git] DEBUG Calling 'git fetch origin pull/536/head' 2024-03-20 09:53:52,179 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-20 09:53:52,179 [ scc.git] DEBUG * branch refs/pull/536/head -> FETCH_HEAD 2024-03-20 09:53:52,184 [ scc.git] DEBUG Calling 'git fetch origin pull/540/head' 2024-03-20 09:53:52,586 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-20 09:53:52,587 [ scc.git] DEBUG * branch refs/pull/540/head -> FETCH_HEAD 2024-03-20 09:53:52,592 [ scc.git] DEBUG Calling 'git fetch origin pull/542/head' 2024-03-20 09:53:53,329 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-20 09:53:53,329 [ scc.git] DEBUG * branch refs/pull/542/head -> FETCH_HEAD 2024-03-20 09:53:53,332 [ scc.git] DEBUG ## Unique users: [] 2024-03-20 09:53:53,332 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:53:53,332 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:53,336 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...219d9e721304a4c46b4d73ef9ff3777549d69615' 2024-03-20 09:53:53,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:53,354 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 219d9e721304a4c46b4d73ef9ff3777549d69615' 2024-03-20 09:53:53,396 [ scc.git] DEBUG Auto-merging test/unit/test_web.py 2024-03-20 09:53:53,396 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/unit/test_web.py 2024-03-20 09:53:53,397 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-03-20 09:53:53,397 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-03-20 09:53:53,404 [ scc.git] DEBUG Calling 'git reset --hard bb3ae5cab33420ff9992e07de8614f5a5c0e234a' 2024-03-20 09:53:53,415 [ scc.git] DEBUG HEAD is now at bb3ae5cab Merge pull request #544 from ome/pre-commit-ci-update-config 2024-03-20 09:53:53,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:53,590 [ scc.git] DEBUG Calling 'git merge-base bb3ae5cab33420ff9992e07de8614f5a5c0e234a 219d9e721304a4c46b4d73ef9ff3777549d69615' 2024-03-20 09:53:53,605 [ scc.git] DEBUG Calling 'git diff --name-only 632d14a9cab5319c6b1bd9190d441a95e457103b..bb3ae5cab33420ff9992e07de8614f5a5c0e234a' 2024-03-20 09:53:53,665 [ scc.git] INFO - PR 168 stick 'Changes to nginx @maintenance handler' Conflicting PR. Removed from build [OMERO-python-superbuild-push#6](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/6/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/6/consoleText) for more details. Possible conflicts: - Upstream changes - test/unit/test_web.py --conflicts 2024-03-20 09:53:53,669 [ scc.config] DEBUG Found github.token 2024-03-20 09:53:53,670 [ scc.git] DEBUG Not adding comment to issue #168, already --conflicts. 2024-03-20 09:53:53,670 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-03-20 09:53:53,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:53,679 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-03-20 09:53:53,697 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-03-20 09:53:53,697 [ scc.git] DEBUG Auto-merging setup.py 2024-03-20 09:53:53,698 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-20 09:53:53,702 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2024-03-20 09:53:53,702 [ scc.git] DEBUG setup.py | 1 + 2024-03-20 09:53:53,702 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2024-03-20 09:53:53,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:53,998 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e335980be1e7197826687f6c322a60c61b4aa545' 2024-03-20 09:53:54,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:54,008 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 533 (use conda-forge channel) e335980be1e7197826687f6c322a60c61b4aa545' 2024-03-20 09:53:54,021 [ scc.git] DEBUG Auto-merging README.rst 2024-03-20 09:53:54,023 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-20 09:53:54,025 [ scc.git] DEBUG README.rst | 3 +-- 2024-03-20 09:53:54,025 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 2 deletions(-) 2024-03-20 09:53:54,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:54,409 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-03-20 09:53:54,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:54,420 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-03-20 09:53:54,440 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2024-03-20 09:53:54,440 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-03-20 09:53:54,441 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-20 09:53:54,445 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2024-03-20 09:53:54,445 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2024-03-20 09:53:54,445 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2024-03-20 09:53:54,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:54,820 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8a41f2f47426759218ab74359c02a7126a10e6eb' 2024-03-20 09:53:54,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:54,832 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 536 (imgData JSON with no stateful services) 8a41f2f47426759218ab74359c02a7126a10e6eb' 2024-03-20 09:53:54,873 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2024-03-20 09:53:54,874 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-03-20 09:53:54,875 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-20 09:53:54,880 [ scc.git] DEBUG omeroweb/webclient/views.py | 4 +- 2024-03-20 09:53:54,880 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 182 ++++++++++++++++++++++++++++++++--------- 2024-03-20 09:53:54,880 [ scc.git] DEBUG omeroweb/webgateway/util.py | 38 +++++++++ 2024-03-20 09:53:54,880 [ scc.git] DEBUG 3 files changed, 185 insertions(+), 39 deletions(-) 2024-03-20 09:53:55,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:55,228 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ee785db51c334b1be62c14ab36414993a2319a30' 2024-03-20 09:53:55,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:55,239 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 540 (Add 'django.template.context_processors.request' to TEMPLATES) ee785db51c334b1be62c14ab36414993a2319a30' 2024-03-20 09:53:55,257 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-03-20 09:53:55,258 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-20 09:53:55,262 [ scc.git] DEBUG omeroweb/settings.py | 1 + 2024-03-20 09:53:55,262 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2024-03-20 09:53:55,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:55,643 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b17e4857626b254e866a393e59e09bd8564fab0a' 2024-03-20 09:53:55,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:55,654 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 542 (PlateAcquisition filtering with plate display) b17e4857626b254e866a393e59e09bd8564fab0a' 2024-03-20 09:53:55,692 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2024-03-20 09:53:55,693 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-20 09:53:55,701 [ scc.git] DEBUG .../data/includes/center_plugin.thumbs.js.html | 13 ++++-------- 2024-03-20 09:53:55,701 [ scc.git] DEBUG .../webclient/templates/webclient/data/plate.html | 10 ++++----- 2024-03-20 09:53:55,701 [ scc.git] DEBUG omeroweb/webclient/views.py | 17 +++++++++++++++ 2024-03-20 09:53:55,701 [ scc.git] DEBUG omeroweb/webgateway/plategrid.py | 24 +++++++++++++++++++--- 2024-03-20 09:53:55,701 [ scc.git] DEBUG .../static/webgateway/js/ome.plateview.js | 15 ++++++++------ 2024-03-20 09:53:55,701 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 2 +- 2024-03-20 09:53:55,701 [ scc.git] DEBUG omeroweb/webgateway/views.py | 13 ++++++++++-- 2024-03-20 09:53:55,701 [ scc.git] DEBUG 7 files changed, 68 insertions(+), 26 deletions(-) 2024-03-20 09:53:56,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:56,047 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-20 09:53:56,084 [ scc.git] DEBUG Get sha1 of %s 2024-03-20 09:53:56,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-20 09:53:56,089 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-20 09:53:56,138 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-20 09:53:56,148 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f23160e5490> has no local changes 2024-03-20 09:53:56,149 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 543 knabar 'Make long-running tasks like "Save to all" more robust' (stage: draft) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 399 will-moore 'Handle chgrp dry-run LogicalChannel[ID] to show images' (stage: draft) - PR 225 will-moore 'Query string ids' (exclude comment) - PR 17 will-moore 'Right panel performance fixes' (exclude comment) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 533 jburel 'use conda-forge channel' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 536 will-moore 'imgData JSON with no stateful services' - PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES' - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' Conflicting PRs (not included): - PR 168 stick 'Changes to nginx @maintenance handler' Generated by OMERO-python-superbuild-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/6/)' 2024-03-20 09:53:56,158 [ scc.git] DEBUG [detached HEAD 0acf5d514] merge master -Dorg -Ssuccess-only 2024-03-20 09:53:56,158 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-20 09:53:56,159 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-20 09:53:56,209 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2024-03-20 09:53:56,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:56,464 [ scc.config] DEBUG Found submodule.omero-marshal.url 2024-03-20 09:53:56,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:56,889 [ scc.config] DEBUG Found submodule.omero-py.url 2024-03-20 09:53:57,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:57,304 [ scc.config] DEBUG Found submodule.omero-scripts.url 2024-03-20 09:53:57,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:57,716 [ scc.config] DEBUG Found submodule.omero-web.url 2024-03-20 09:53:58,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-20 09:53:58,131 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-20 09:53:58,156 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f23187021f0> has local changes 2024-03-20 09:53:58,157 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 270 dependabot[bot] 'Bump omero-web from `99aebd2` to `bb3ae5c`' Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' - PR 23 sbesson 'Remove python-future compatibility code' Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 400 jburel 'Session ID and constructor' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 394 jo-mueller 'added `_repr_html_` method for `_ImageWrapper`' (user: jo-mueller) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 398 will-moore 'getGridSize() handles plates with no Wells' Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 543 knabar 'Make long-running tasks like "Save to all" more robust' (stage: draft) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 399 will-moore 'Handle chgrp dry-run LogicalChannel[ID] to show images' (stage: draft) - PR 225 will-moore 'Query string ids' (exclude comment) - PR 17 will-moore 'Right panel performance fixes' (exclude comment) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 533 jburel 'use conda-forge channel' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 536 will-moore 'imgData JSON with no stateful services' - PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES' - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' Conflicting PRs (not included): - PR 168 stick 'Changes to nginx @maintenance handler' Generated by OMERO-python-superbuild-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/6/)' 2024-03-20 09:53:58,165 [ scc.git] DEBUG [detached HEAD 6e5c770] merge master -Dorg -Ssuccess-only 2024-03-20 09:53:58,165 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-03-20 09:53:58,165 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2024-03-20 09:53:58,165 [ scc.merge] INFO Already up to date. 2024-03-20 09:53:58,165 [ scc.merge] INFO 2024-03-20 09:53:58,166 [ scc.merge] INFO Merged PRs: 2024-03-20 09:53:58,166 [ scc.merge] INFO - PR 270 dependabot[bot] 'Bump omero-web from `99aebd2` to `bb3ae5c`' 2024-03-20 09:53:58,166 [ scc.merge] INFO 2024-03-20 09:53:58,166 [ scc.merge] INFO Repository: ome/omero-dropbox 2024-03-20 09:53:58,166 [ scc.merge] INFO Already up to date. 2024-03-20 09:53:58,166 [ scc.merge] INFO 2024-03-20 09:53:58,166 [ scc.merge] INFO Merged PRs: 2024-03-20 09:53:58,166 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-03-20 09:53:58,166 [ scc.merge] INFO - PR 23 sbesson 'Remove python-future compatibility code' 2024-03-20 09:53:58,166 [ scc.merge] INFO 2024-03-20 09:53:58,166 [ scc.merge] INFO Repository: ome/omero-marshal 2024-03-20 09:53:58,166 [ scc.merge] INFO Excluded PRs: 2024-03-20 09:53:58,166 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2024-03-20 09:53:58,166 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2024-03-20 09:53:58,166 [ scc.merge] INFO Already up to date. 2024-03-20 09:53:58,166 [ scc.merge] INFO 2024-03-20 09:53:58,166 [ scc.merge] INFO Merged PRs: 2024-03-20 09:53:58,166 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2024-03-20 09:53:58,166 [ scc.merge] INFO 2024-03-20 09:53:58,166 [ scc.merge] INFO Repository: ome/omero-py 2024-03-20 09:53:58,166 [ scc.merge] INFO Excluded PRs: 2024-03-20 09:53:58,166 [ scc.merge] INFO - PR 400 jburel 'Session ID and constructor' (label: exclude) 2024-03-20 09:53:58,166 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2024-03-20 09:53:58,166 [ scc.merge] INFO - PR 394 jo-mueller 'added `_repr_html_` method for `_ImageWrapper`' (user: jo-mueller) 2024-03-20 09:53:58,166 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2024-03-20 09:53:58,166 [ scc.merge] INFO - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) 2024-03-20 09:53:58,166 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2024-03-20 09:53:58,166 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2024-03-20 09:53:58,166 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2024-03-20 09:53:58,166 [ scc.merge] INFO Already up to date. 2024-03-20 09:53:58,166 [ scc.merge] INFO 2024-03-20 09:53:58,166 [ scc.merge] INFO Merged PRs: 2024-03-20 09:53:58,166 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2024-03-20 09:53:58,166 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2024-03-20 09:53:58,166 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-03-20 09:53:58,166 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 398 will-moore 'getGridSize() handles plates with no Wells' 2024-03-20 09:53:58,167 [ scc.merge] INFO 2024-03-20 09:53:58,167 [ scc.merge] INFO Repository: ome/omero-scripts 2024-03-20 09:53:58,167 [ scc.merge] INFO Excluded PRs: 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-03-20 09:53:58,167 [ scc.merge] INFO Already up to date. 2024-03-20 09:53:58,167 [ scc.merge] INFO 2024-03-20 09:53:58,167 [ scc.merge] INFO Conflicting PRs (not included): 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-03-20 09:53:58,167 [ scc.merge] INFO 2024-03-20 09:53:58,167 [ scc.merge] INFO Repository: ome/omero-web 2024-03-20 09:53:58,167 [ scc.merge] INFO Excluded PRs: 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 543 knabar 'Make long-running tasks like "Save to all" more robust' (stage: draft) 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 399 will-moore 'Handle chgrp dry-run LogicalChannel[ID] to show images' (stage: draft) 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 225 will-moore 'Query string ids' (exclude comment) 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 17 will-moore 'Right panel performance fixes' (exclude comment) 2024-03-20 09:53:58,167 [ scc.merge] INFO Already up to date. 2024-03-20 09:53:58,167 [ scc.merge] INFO 2024-03-20 09:53:58,167 [ scc.merge] INFO Merged PRs: 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 533 jburel 'use conda-forge channel' 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 536 will-moore 'imgData JSON with no stateful services' 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES' 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' 2024-03-20 09:53:58,167 [ scc.merge] INFO 2024-03-20 09:53:58,167 [ scc.merge] INFO Conflicting PRs (not included): 2024-03-20 09:53:58,167 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' 2024-03-20 09:53:58,168 [ scc.merge] INFO 2024-03-20 09:53:58,168 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-03-20 09:53:58,168 [ scc.git] DEBUG Calling 'git remote' 2024-03-20 09:53:58,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-03-20 09:53:58,171 [ scc.git] DEBUG Calling 'git remote' 2024-03-20 09:53:58,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-20 09:53:58,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-03-20 09:53:58,175 [ scc.git] DEBUG Calling 'git remote' 2024-03-20 09:53:58,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-20 09:53:58,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-03-20 09:53:58,178 [ scc.git] DEBUG Calling 'git remote' 2024-03-20 09:53:58,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-20 09:53:58,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-03-20 09:53:58,182 [ scc.git] DEBUG Calling 'git remote' 2024-03-20 09:53:58,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-20 09:53:58,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-03-20 09:53:58,185 [ scc.git] DEBUG Calling 'git remote' 2024-03-20 09:53:58,189 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/usr/lib64/python3.9/urllib/request.py", line 1346, in do_open h.request(req.get_method(), req.selector, req.data, headers, File "/usr/lib64/python3.9/http/client.py", line 1285, in request self._send_request(method, url, body, headers, encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1331, in _send_request self.endheaders(body, encode_chunked=encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1280, in endheaders self._send_output(message_body, encode_chunked=encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1040, in _send_output self.send(msg) File "/usr/lib64/python3.9/http/client.py", line 980, in send self.connect() File "/usr/lib64/python3.9/http/client.py", line 1447, in connect super().connect() File "/usr/lib64/python3.9/http/client.py", line 946, in connect self.sock = self._create_connection( File "/usr/lib64/python3.9/socket.py", line 823, in create_connection for res in getaddrinfo(host, port, 0, SOCK_STREAM): File "/usr/lib64/python3.9/socket.py", line 954, in getaddrinfo for res in _socket.getaddrinfo(host, port, family, type, proto, flags): socket.gaierror: [Errno -2] Name or service not known During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 517, in open response = self._open(req, data) File "/usr/lib64/python3.9/urllib/request.py", line 534, in _open result = self._call_chain(self.handle_open, protocol, protocol + File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 1389, in https_open return self.do_open(http.client.HTTPSConnection, req, File "/usr/lib64/python3.9/urllib/request.py", line 1349, in do_open raise URLError(err) urllib.error.URLError: <urlopen error [Errno -2] Name or service not known> Downloading https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/usr/lib64/python3.9/urllib/request.py", line 1346, in do_open h.request(req.get_method(), req.selector, req.data, headers, File "/usr/lib64/python3.9/http/client.py", line 1285, in request self._send_request(method, url, body, headers, encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1331, in _send_request self.endheaders(body, encode_chunked=encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1280, in endheaders self._send_output(message_body, encode_chunked=encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1040, in _send_output self.send(msg) File "/usr/lib64/python3.9/http/client.py", line 980, in send self.connect() File "/usr/lib64/python3.9/http/client.py", line 1447, in connect super().connect() File "/usr/lib64/python3.9/http/client.py", line 946, in connect self.sock = self._create_connection( File "/usr/lib64/python3.9/socket.py", line 823, in create_connection for res in getaddrinfo(host, port, 0, SOCK_STREAM): File "/usr/lib64/python3.9/socket.py", line 954, in getaddrinfo for res in _socket.getaddrinfo(host, port, family, type, proto, flags): socket.gaierror: [Errno -2] Name or service not known During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 517, in open response = self._open(req, data) File "/usr/lib64/python3.9/urllib/request.py", line 534, in _open result = self._call_chain(self.handle_open, protocol, protocol + File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 1389, in https_open return self.do_open(http.client.HTTPSConnection, req, File "/usr/lib64/python3.9/urllib/request.py", line 1349, in do_open raise URLError(err) urllib.error.URLError: <urlopen error [Errno -2] Name or service not known> grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 5863350 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from cca4c2f nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 0dc60bd6 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 2078ac7 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from bb3ae5cab nothing to commit, working tree clean HEAD detached from 2c91b66 nothing to commit, working tree clean 2024-03-20 09:54:28,635 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS