Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-05-21 00:33:37,634 [ scc.config] DEBUG Found github.token
2024-05-21 00:33:37,637 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-05-21 00:33:37,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:33:38,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:33:38,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-05-21 00:33:38,652 [ scc.gh] DEBUG 4542 remaining from 5000 (Reset at 01:05
2024-05-21 00:33:38,653 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-21 00:33:38,657 [ scc.git] DEBUG Check current status
2024-05-21 00:33:38,657 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-21 00:33:38,661 [ scc.git] DEBUG 43f3613 Merge pull request #280 from ome/dependabot/submodules/omero-web-c6314d8
2024-05-21 00:33:38,661 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-21 00:33:38,705 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-21 00:33:38,708 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-21 00:33:38,793 [ scc.git] DEBUG 53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-21 00:33:38,797 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-21 00:33:38,953 [ scc.git] DEBUG c6314d8a9917ba4112696d683516d89be8fafcb0 omero-web (v5.25.0-43-gc6314d8a9)
2024-05-21 00:33:38,959 [ scc.config] DEBUG Found remote.origin.url
2024-05-21 00:33:39,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-05-21 00:33:39,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-21 00:33:40,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-21 00:33:40,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-21 00:33:40,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-21 00:33:40,863 [ scc.git] DEBUG Resetting...
2024-05-21 00:33:40,863 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-05-21 00:33:40,869 [ scc.git] DEBUG HEAD is now at 43f3613 Merge pull request #280 from ome/dependabot/submodules/omero-web-c6314d8
2024-05-21 00:33:40,869 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-05-21 00:33:40,928 [ scc.git] DEBUG Check current status
2024-05-21 00:33:40,928 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-21 00:33:40,933 [ scc.git] DEBUG 43f3613 Merge pull request #280 from ome/dependabot/submodules/omero-web-c6314d8
2024-05-21 00:33:40,933 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-21 00:33:40,972 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-21 00:33:40,975 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-21 00:33:40,978 [ scc.git] DEBUG 53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-21 00:33:40,982 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-21 00:33:40,986 [ scc.git] DEBUG c6314d8a9917ba4112696d683516d89be8fafcb0 omero-web (v5.25.0-43-gc6314d8a9)
2024-05-21 00:33:40,987 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-05-21 00:33:40,987 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-05-21 00:33:40,987 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-05-21 00:33:40,987 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-05-21 00:33:40,987 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-05-21 00:33:40,987 [ scc.repo] DEBUG ## PRs found:
2024-05-21 00:33:41,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-05-21 00:33:41,287 [ scc.repo] DEBUG ## Branches found:
2024-05-21 00:33:41,287 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:33:41,287 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:33:41,292 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-21 00:33:41,296 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-21 00:33:41,296 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-21 00:33:41,300 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-21 00:33:41,304 [ scc.git] DEBUG Already up to date.
2024-05-21 00:33:41,304 [ scc.git] DEBUG ## Unique users: []
2024-05-21 00:33:41,304 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:33:41,304 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:33:41,307 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-21 00:33:41,347 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:33:41,347 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:33:41,351 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-21 00:33:41,546 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f933c3a7460> has no local changes
2024-05-21 00:33:41,547 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Generated by OMERO-python-superbuild-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/68/)'
2024-05-21 00:33:41,574 [ scc.git] DEBUG [detached HEAD 616632c] merge master -Dorg -Snone
2024-05-21 00:33:41,575 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-05-21 00:33:41,575 [ scc.merge] INFO Already up to date.
2024-05-21 00:33:41,575 [ scc.merge] INFO
2024-05-21 00:33:41,575 [ scc.merge] INFO
2024-05-21 00:33:41,575 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-05-21 00:33:41,575 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-05-21 00:33:44,020 [ scc.config] DEBUG Found github.token
2024-05-21 00:33:44,023 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-05-21 00:33:44,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:33:44,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:33:45,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-05-21 00:33:45,042 [ scc.gh] DEBUG 4519 remaining from 5000 (Reset at 01:05
2024-05-21 00:33:45,043 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-21 00:33:45,048 [ scc.git] DEBUG Check current status
2024-05-21 00:33:45,048 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-21 00:33:45,053 [ scc.git] DEBUG 616632c merge master -Dorg -Snone
2024-05-21 00:33:45,054 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-21 00:33:45,101 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-21 00:33:45,104 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-21 00:33:45,108 [ scc.git] DEBUG 53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-21 00:33:45,112 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-21 00:33:45,116 [ scc.git] DEBUG c6314d8a9917ba4112696d683516d89be8fafcb0 omero-web (v5.25.0-43-gc6314d8a9)
2024-05-21 00:33:45,127 [ scc.config] DEBUG Found remote.origin.url
2024-05-21 00:33:45,127 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-05-21 00:33:45,129 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-05-21 00:33:45,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-05-21 00:33:45,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-21 00:33:46,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-21 00:33:46,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-21 00:33:47,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-21 00:33:47,229 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-21 00:33:47,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-05-21 00:33:47,279 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-21 00:33:47,284 [ scc.git] DEBUG Check current status
2024-05-21 00:33:47,284 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-21 00:33:47,288 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-05-21 00:33:47,289 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-21 00:33:47,337 [ scc.config] DEBUG Found remote.origin.url
2024-05-21 00:33:47,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-05-21 00:33:48,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-21 00:33:48,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-21 00:33:49,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-21 00:33:49,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-21 00:33:49,422 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-21 00:33:49,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-21 00:33:49,465 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-05-21 00:33:49,465 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-21 00:33:49,469 [ scc.git] DEBUG Check current status
2024-05-21 00:33:49,470 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-21 00:33:49,474 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-05-21 00:33:49,474 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-21 00:33:49,521 [ scc.config] DEBUG Found remote.origin.url
2024-05-21 00:33:49,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-05-21 00:33:50,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-21 00:33:50,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-21 00:33:51,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-21 00:33:51,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-21 00:33:51,592 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-21 00:33:51,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-21 00:33:51,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-05-21 00:33:51,637 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-21 00:33:51,642 [ scc.git] DEBUG Check current status
2024-05-21 00:33:51,642 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-21 00:33:51,658 [ scc.git] DEBUG 53a327b8 Merge pull request #407 from jburel/install_conda_forge
2024-05-21 00:33:51,659 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-21 00:33:51,703 [ scc.config] DEBUG Found remote.origin.url
2024-05-21 00:33:52,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-05-21 00:33:52,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-21 00:33:52,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-21 00:33:53,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-21 00:33:53,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-21 00:33:53,809 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-21 00:33:53,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-21 00:33:53,850 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-05-21 00:33:53,850 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-21 00:33:53,855 [ scc.git] DEBUG Check current status
2024-05-21 00:33:53,855 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-21 00:33:53,873 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-05-21 00:33:53,873 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-21 00:33:53,914 [ scc.config] DEBUG Found remote.origin.url
2024-05-21 00:33:53,915 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-05-21 00:33:54,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-05-21 00:33:54,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-21 00:33:55,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-21 00:33:55,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-21 00:33:55,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-21 00:33:55,973 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-21 00:33:56,012 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-21 00:33:56,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-05-21 00:33:56,013 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-21 00:33:56,017 [ scc.git] DEBUG Check current status
2024-05-21 00:33:56,017 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-21 00:33:56,033 [ scc.git] DEBUG c6314d8a9 Merge pull request #553 from ome/pre-commit-ci-update-config
2024-05-21 00:33:56,034 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-21 00:33:56,076 [ scc.config] DEBUG Found remote.origin.url
2024-05-21 00:33:56,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-05-21 00:33:56,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-21 00:33:57,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-21 00:33:57,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-21 00:33:58,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-21 00:33:58,278 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-21 00:33:58,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-21 00:33:58,324 [ scc.git] DEBUG Resetting...
2024-05-21 00:33:58,325 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-05-21 00:33:58,331 [ scc.git] DEBUG HEAD is now at 616632c merge master -Dorg -Snone
2024-05-21 00:33:58,331 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-05-21 00:33:58,393 [ scc.git] DEBUG Check current status
2024-05-21 00:33:58,394 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-21 00:33:58,399 [ scc.git] DEBUG 616632c merge master -Dorg -Snone
2024-05-21 00:33:58,399 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-21 00:33:58,444 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-21 00:33:58,447 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-21 00:33:58,451 [ scc.git] DEBUG 53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-21 00:33:58,455 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-21 00:33:58,460 [ scc.git] DEBUG c6314d8a9917ba4112696d683516d89be8fafcb0 omero-web (v5.25.0-43-gc6314d8a9)
2024-05-21 00:33:58,461 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-05-21 00:33:58,461 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-05-21 00:33:58,461 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-05-21 00:33:58,461 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-05-21 00:33:58,461 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-05-21 00:33:58,461 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-05-21 00:33:58,461 [ scc.repo] DEBUG ## PRs found:
2024-05-21 00:33:58,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-05-21 00:33:58,708 [ scc.repo] DEBUG ## Branches found:
2024-05-21 00:33:58,708 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:33:58,708 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:33:58,713 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-21 00:33:58,717 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-21 00:33:58,717 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-21 00:33:58,722 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-21 00:33:58,727 [ scc.git] DEBUG Already up to date.
2024-05-21 00:33:58,728 [ scc.git] DEBUG ## Unique users: []
2024-05-21 00:33:58,728 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:33:58,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:33:58,733 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-21 00:33:58,777 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:33:58,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:33:58,782 [ scc.repo] DEBUG ## PRs found:
2024-05-21 00:33:59,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-05-21 00:33:59,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-05-21 00:34:00,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-05-21 00:34:00,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-05-21 00:34:01,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-21 00:34:01,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-05-21 00:34:01,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-05-21 00:34:01,985 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-05-21 00:34:01,986 [ scc.repo] DEBUG ## Branches found:
2024-05-21 00:34:01,986 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-05-21 00:34:01,986 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:34:01,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:01,992 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-21 00:34:01,996 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-21 00:34:01,996 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-21 00:34:02,000 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-21 00:34:02,004 [ scc.git] DEBUG Already up to date.
2024-05-21 00:34:02,004 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-05-21 00:34:02,416 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-05-21 00:34:02,416 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-05-21 00:34:02,421 [ scc.git] DEBUG ## Unique users: []
2024-05-21 00:34:02,421 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:34:02,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:02,425 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-05-21 00:34:02,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:02,433 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-05-21 00:34:02,627 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-05-21 00:34:02,628 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-05-21 00:34:02,629 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-05-21 00:34:02,629 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-05-21 00:34:02,629 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-05-21 00:34:02,629 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-05-21 00:34:02,629 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-05-21 00:34:02,630 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-05-21 00:34:02,630 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-05-21 00:34:02,630 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-21 00:34:02,643 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-05-21 00:34:02,644 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-05-21 00:34:02,644 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-05-21 00:34:02,644 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-05-21 00:34:02,644 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-05-21 00:34:02,644 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-05-21 00:34:02,644 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-05-21 00:34:02,644 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-05-21 00:34:02,644 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-05-21 00:34:02,644 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-05-21 00:34:02,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:34:02,808 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-21 00:34:02,849 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:34:02,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:02,854 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-21 00:34:02,895 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-21 00:34:02,902 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4e608a3430> has no local changes
2024-05-21 00:34:02,902 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/68/)'
2024-05-21 00:34:02,911 [ scc.git] DEBUG [detached HEAD 7be3349] merge master -Dorg -Ssuccess-only
2024-05-21 00:34:02,911 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-21 00:34:02,911 [ scc.repo] DEBUG ## PRs found:
2024-05-21 00:34:03,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-05-21 00:34:03,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-05-21 00:34:04,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-05-21 00:34:04,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-05-21 00:34:05,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-21 00:34:05,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-21 00:34:06,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-05-21 00:34:06,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-05-21 00:34:06,618 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-05-21 00:34:07,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-05-21 00:34:07,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-05-21 00:34:08,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-05-21 00:34:08,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-05-21 00:34:08,483 [ scc.repo] DEBUG ## Branches found:
2024-05-21 00:34:08,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-05-21 00:34:08,483 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:34:08,483 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:08,489 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-21 00:34:08,494 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-21 00:34:08,494 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-21 00:34:08,500 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-21 00:34:08,506 [ scc.git] DEBUG Already up to date.
2024-05-21 00:34:08,506 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-05-21 00:34:08,964 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-05-21 00:34:08,964 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-05-21 00:34:08,969 [ scc.git] DEBUG ## Unique users: []
2024-05-21 00:34:08,969 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:34:08,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:08,974 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-05-21 00:34:08,981 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:08,984 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-05-21 00:34:09,006 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-05-21 00:34:09,007 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-21 00:34:09,010 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-05-21 00:34:09,010 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-05-21 00:34:09,010 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-05-21 00:34:09,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:34:09,165 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-21 00:34:09,210 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:34:09,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:09,217 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-21 00:34:09,257 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-21 00:34:09,263 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4e60835d00> has no local changes
2024-05-21 00:34:09,263 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/68/)'
2024-05-21 00:34:09,273 [ scc.git] DEBUG [detached HEAD d3c67a2] merge master -Dorg -Ssuccess-only
2024-05-21 00:34:09,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-21 00:34:09,273 [ scc.repo] DEBUG ## PRs found:
2024-05-21 00:34:09,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-05-21 00:34:10,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-05-21 00:34:10,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-05-21 00:34:11,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-05-21 00:34:11,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-21 00:34:12,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-21 00:34:12,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-05-21 00:34:13,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-05-21 00:34:13,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-05-21 00:34:13,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-05-21 00:34:13,916 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-05-21 00:34:14,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-05-21 00:34:14,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-05-21 00:34:15,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-05-21 00:34:15,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-21 00:34:16,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-21 00:34:16,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-05-21 00:34:17,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-05-21 00:34:17,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-21 00:34:18,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-21 00:34:18,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-05-21 00:34:18,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-05-21 00:34:19,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-05-21 00:34:19,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-05-21 00:34:19,838 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-05-21 00:34:20,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-05-21 00:34:20,307 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-05-21 00:34:20,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378 HTTP/1.1" 200 None
2024-05-21 00:34:21,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378/comments HTTP/1.1" 200 None
2024-05-21 00:34:21,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-05-21 00:34:22,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-05-21 00:34:22,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-05-21 00:34:23,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-21 00:34:23,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-05-21 00:34:23,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-05-21 00:34:23,885 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-05-21 00:34:24,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-05-21 00:34:24,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-05-21 00:34:25,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-05-21 00:34:25,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-21 00:34:26,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-21 00:34:26,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-05-21 00:34:27,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-05-21 00:34:27,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-05-21 00:34:27,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-05-21 00:34:27,890 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-05-21 00:34:28,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-05-21 00:34:28,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-05-21 00:34:29,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-05-21 00:34:29,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-05-21 00:34:30,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-05-21 00:34:30,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-21 00:34:31,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-05-21 00:34:31,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-05-21 00:34:31,591 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-05-21 00:34:32,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-05-21 00:34:32,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-05-21 00:34:32,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-21 00:34:33,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-05-21 00:34:33,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-05-21 00:34:33,913 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-05-21 00:34:34,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-05-21 00:34:34,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-05-21 00:34:35,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-05-21 00:34:35,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-21 00:34:36,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-05-21 00:34:36,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-05-21 00:34:36,681 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-05-21 00:34:37,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-05-21 00:34:37,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-05-21 00:34:38,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-05-21 00:34:38,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-21 00:34:38,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-05-21 00:34:39,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-05-21 00:34:39,392 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-05-21 00:34:39,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-05-21 00:34:40,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-05-21 00:34:40,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-05-21 00:34:41,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-05-21 00:34:41,253 [ scc.repo] DEBUG ## Branches found:
2024-05-21 00:34:41,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-05-21 00:34:41,254 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:34:41,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:41,261 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-21 00:34:41,267 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-21 00:34:41,267 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-21 00:34:41,273 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-21 00:34:41,280 [ scc.git] DEBUG Already up to date.
2024-05-21 00:34:41,280 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-05-21 00:34:41,936 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-21 00:34:41,936 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-05-21 00:34:41,942 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-05-21 00:34:42,392 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-21 00:34:42,392 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-05-21 00:34:42,399 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-05-21 00:34:42,797 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-21 00:34:42,797 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-05-21 00:34:42,803 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-05-21 00:34:43,241 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-21 00:34:43,241 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-05-21 00:34:43,247 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-05-21 00:34:43,714 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-21 00:34:43,715 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-05-21 00:34:43,721 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-05-21 00:34:44,103 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-21 00:34:44,103 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-05-21 00:34:44,109 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-05-21 00:34:44,534 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-21 00:34:44,534 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-05-21 00:34:44,540 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-05-21 00:34:44,993 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-21 00:34:44,993 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-05-21 00:34:44,999 [ scc.git] DEBUG ## Unique users: []
2024-05-21 00:34:44,999 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:34:44,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:45,005 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-05-21 00:34:45,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:45,022 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-05-21 00:34:45,075 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-05-21 00:34:45,076 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-05-21 00:34:45,077 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-21 00:34:45,082 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-05-21 00:34:45,082 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-05-21 00:34:45,082 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-05-21 00:34:45,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:34:45,248 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-05-21 00:34:45,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:45,266 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-05-21 00:34:45,450 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-05-21 00:34:45,450 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-05-21 00:34:45,452 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-21 00:34:45,464 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-05-21 00:34:45,464 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-05-21 00:34:45,464 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-05-21 00:34:45,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:34:45,647 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-05-21 00:34:45,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:45,668 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-05-21 00:34:45,764 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-05-21 00:34:45,765 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-21 00:34:45,768 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-05-21 00:34:45,768 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-05-21 00:34:46,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:34:46,074 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-05-21 00:34:46,088 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:46,096 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-05-21 00:34:46,183 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-05-21 00:34:46,183 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-05-21 00:34:46,185 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-21 00:34:46,188 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-05-21 00:34:46,189 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-05-21 00:34:46,189 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-05-21 00:34:46,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:34:46,487 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-05-21 00:34:46,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:46,504 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-05-21 00:34:46,587 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-21 00:34:46,589 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-05-21 00:34:46,590 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-05-21 00:34:46,590 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-05-21 00:34:46,590 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-05-21 00:34:46,590 [ scc.git] DEBUG create mode 100644 connect.py
2024-05-21 00:34:46,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:34:46,894 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-05-21 00:34:46,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:46,911 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-05-21 00:34:46,982 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-05-21 00:34:46,985 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-21 00:34:46,989 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-05-21 00:34:46,989 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-05-21 00:34:47,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:34:47,307 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-05-21 00:34:47,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:47,325 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-05-21 00:34:47,396 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-05-21 00:34:47,397 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-21 00:34:47,400 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-05-21 00:34:47,400 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-05-21 00:34:47,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:34:47,718 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-05-21 00:34:47,731 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:47,735 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-05-21 00:34:47,804 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-05-21 00:34:47,812 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-21 00:34:47,819 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-05-21 00:34:47,819 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-05-21 00:34:48,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:34:48,142 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-21 00:34:48,180 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:34:48,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:48,186 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-21 00:34:48,225 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-21 00:34:48,234 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4e5f7de790> has no local changes
2024-05-21 00:34:48,235 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
Generated by OMERO-python-superbuild-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/68/)'
2024-05-21 00:34:48,244 [ scc.git] DEBUG [detached HEAD de295a2a] merge master -Dorg -Ssuccess-only
2024-05-21 00:34:48,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-21 00:34:48,244 [ scc.git] INFO Overriding base-branch from master to develop
2024-05-21 00:34:48,244 [ scc.repo] DEBUG ## PRs found:
2024-05-21 00:34:48,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-05-21 00:34:49,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-05-21 00:34:49,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-05-21 00:34:50,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-05-21 00:34:50,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-05-21 00:34:50,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-05-21 00:34:51,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-05-21 00:34:51,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-05-21 00:34:52,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-21 00:34:52,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-05-21 00:34:53,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-05-21 00:34:53,196 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-05-21 00:34:53,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-05-21 00:34:54,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-05-21 00:34:54,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-05-21 00:34:55,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-05-21 00:34:55,106 [ scc.repo] DEBUG ## Branches found:
2024-05-21 00:34:55,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-05-21 00:34:55,106 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:34:55,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:55,111 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-05-21 00:34:55,117 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-21 00:34:55,117 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-05-21 00:34:55,122 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-05-21 00:34:55,127 [ scc.git] DEBUG Already up to date.
2024-05-21 00:34:55,127 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-05-21 00:34:55,639 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-05-21 00:34:55,639 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-05-21 00:34:55,645 [ scc.git] DEBUG ## Unique users: []
2024-05-21 00:34:55,645 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:34:55,645 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:55,651 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-05-21 00:34:55,659 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:55,666 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-05-21 00:34:55,715 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-05-21 00:34:55,715 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-05-21 00:34:55,715 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-05-21 00:34:55,715 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-05-21 00:34:55,720 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a'
2024-05-21 00:34:55,726 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-05-21 00:34:55,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:34:55,893 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-05-21 00:34:55,901 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a'
2024-05-21 00:34:55,908 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#68](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/68/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/68/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-05-21 00:34:55,914 [ scc.config] DEBUG Found github.token
2024-05-21 00:34:55,914 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-05-21 00:34:55,914 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-21 00:34:55,958 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:34:55,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:34:55,964 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-21 00:34:56,013 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-21 00:34:56,020 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4e60890520> has no local changes
2024-05-21 00:34:56,020 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/68/)'
2024-05-21 00:34:56,030 [ scc.git] DEBUG [detached HEAD 828ef75] merge master -Dorg -Ssuccess-only
2024-05-21 00:34:56,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-21 00:34:56,031 [ scc.repo] DEBUG ## PRs found:
2024-05-21 00:34:56,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-05-21 00:34:56,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554 HTTP/1.1" 200 None
2024-05-21 00:34:57,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-05-21 00:34:57,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-05-21 00:34:58,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-05-21 00:34:58,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-05-21 00:34:59,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-21 00:34:59,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-21 00:35:00,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-05-21 00:35:00,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-05-21 00:35:01,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-05-21 00:35:01,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-05-21 00:35:01,483 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-05-21 00:35:01,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-05-21 00:35:02,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-05-21 00:35:02,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-05-21 00:35:03,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-21 00:35:03,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-21 00:35:04,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-05-21 00:35:04,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-05-21 00:35:05,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-05-21 00:35:05,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-05-21 00:35:05,701 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-05-21 00:35:06,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-05-21 00:35:06,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-05-21 00:35:07,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-05-21 00:35:07,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-21 00:35:08,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-21 00:35:08,066 [ scc.repo] DEBUG ## Branches found:
2024-05-21 00:35:08,066 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-05-21 00:35:08,066 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:35:08,066 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:35:08,072 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-21 00:35:08,076 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-21 00:35:08,076 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-21 00:35:08,081 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-21 00:35:08,087 [ scc.git] DEBUG Already up to date.
2024-05-21 00:35:08,087 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-05-21 00:35:08,654 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-05-21 00:35:08,655 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-05-21 00:35:08,662 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-05-21 00:35:09,206 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-05-21 00:35:09,206 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-05-21 00:35:09,212 [ scc.git] DEBUG ## Unique users: []
2024-05-21 00:35:09,212 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:35:09,212 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:35:09,219 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-05-21 00:35:09,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:35:09,234 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-05-21 00:35:09,335 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-05-21 00:35:09,335 [ scc.git] DEBUG Auto-merging setup.py
2024-05-21 00:35:09,337 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-21 00:35:09,341 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-05-21 00:35:09,341 [ scc.git] DEBUG setup.py | 1 +
2024-05-21 00:35:09,341 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-05-21 00:35:09,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:35:09,499 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-05-21 00:35:09,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:35:09,513 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-05-21 00:35:09,602 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-05-21 00:35:09,603 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-05-21 00:35:09,614 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-21 00:35:09,618 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-05-21 00:35:09,618 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-05-21 00:35:09,618 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-05-21 00:35:09,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:35:09,901 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-21 00:35:09,947 [ scc.git] DEBUG Get sha1 of %s
2024-05-21 00:35:09,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-21 00:35:09,952 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-21 00:35:10,002 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-21 00:35:10,014 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4e5f79c4f0> has no local changes
2024-05-21 00:35:10,014 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 555 chris-allan 'Archive status' (exclude comment)
- PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Generated by OMERO-python-superbuild-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/68/)'
2024-05-21 00:35:10,038 [ scc.git] DEBUG [detached HEAD 4e5fd212b] merge master -Dorg -Ssuccess-only
2024-05-21 00:35:10,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-21 00:35:10,039 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-21 00:35:10,099 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-05-21 00:35:10,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:35:10,318 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-05-21 00:35:10,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:35:10,729 [ scc.config] DEBUG Found submodule.omero-py.url
2024-05-21 00:35:11,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:35:11,136 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-05-21 00:35:11,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:35:11,559 [ scc.config] DEBUG Found submodule.omero-web.url
2024-05-21 00:35:11,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-21 00:35:11,966 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-21 00:35:11,994 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4e62c5a460> has local changes
2024-05-21 00:35:11,994 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 555 chris-allan 'Archive status' (exclude comment)
- PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Generated by OMERO-python-superbuild-push#68 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/68/)'
2024-05-21 00:35:12,004 [ scc.git] DEBUG [detached HEAD 440141b] merge master -Dorg -Ssuccess-only
2024-05-21 00:35:12,005 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-05-21 00:35:12,005 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-05-21 00:35:12,005 [ scc.merge] INFO Already up to date.
2024-05-21 00:35:12,005 [ scc.merge] INFO
2024-05-21 00:35:12,005 [ scc.merge] INFO
2024-05-21 00:35:12,005 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-05-21 00:35:12,005 [ scc.merge] INFO Already up to date.
2024-05-21 00:35:12,005 [ scc.merge] INFO
2024-05-21 00:35:12,005 [ scc.merge] INFO Merged PRs:
2024-05-21 00:35:12,005 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-05-21 00:35:12,005 [ scc.merge] INFO
2024-05-21 00:35:12,005 [ scc.merge] INFO Repository: ome/omero-marshal
2024-05-21 00:35:12,005 [ scc.merge] INFO Excluded PRs:
2024-05-21 00:35:12,005 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-05-21 00:35:12,005 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-05-21 00:35:12,005 [ scc.merge] INFO Already up to date.
2024-05-21 00:35:12,005 [ scc.merge] INFO
2024-05-21 00:35:12,005 [ scc.merge] INFO Merged PRs:
2024-05-21 00:35:12,005 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-05-21 00:35:12,006 [ scc.merge] INFO
2024-05-21 00:35:12,006 [ scc.merge] INFO Repository: ome/omero-py
2024-05-21 00:35:12,006 [ scc.merge] INFO Excluded PRs:
2024-05-21 00:35:12,006 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-05-21 00:35:12,006 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-05-21 00:35:12,006 [ scc.merge] INFO - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
2024-05-21 00:35:12,006 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-05-21 00:35:12,006 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-05-21 00:35:12,006 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-05-21 00:35:12,006 [ scc.merge] INFO Already up to date.
2024-05-21 00:35:12,006 [ scc.merge] INFO
2024-05-21 00:35:12,006 [ scc.merge] INFO Merged PRs:
2024-05-21 00:35:12,006 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-05-21 00:35:12,006 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-05-21 00:35:12,006 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-05-21 00:35:12,006 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-05-21 00:35:12,006 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-05-21 00:35:12,006 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-05-21 00:35:12,006 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-05-21 00:35:12,006 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-05-21 00:35:12,006 [ scc.merge] INFO
2024-05-21 00:35:12,006 [ scc.merge] INFO Repository: ome/omero-scripts
2024-05-21 00:35:12,006 [ scc.merge] INFO Excluded PRs:
2024-05-21 00:35:12,006 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-05-21 00:35:12,006 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-05-21 00:35:12,006 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-05-21 00:35:12,006 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-05-21 00:35:12,006 [ scc.merge] INFO Already up to date.
2024-05-21 00:35:12,006 [ scc.merge] INFO
2024-05-21 00:35:12,006 [ scc.merge] INFO Conflicting PRs (not included):
2024-05-21 00:35:12,007 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-05-21 00:35:12,007 [ scc.merge] INFO
2024-05-21 00:35:12,007 [ scc.merge] INFO Repository: ome/omero-web
2024-05-21 00:35:12,007 [ scc.merge] INFO Excluded PRs:
2024-05-21 00:35:12,007 [ scc.merge] INFO - PR 555 chris-allan 'Archive status' (exclude comment)
2024-05-21 00:35:12,007 [ scc.merge] INFO - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
2024-05-21 00:35:12,007 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-05-21 00:35:12,007 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-05-21 00:35:12,007 [ scc.merge] INFO Already up to date.
2024-05-21 00:35:12,007 [ scc.merge] INFO
2024-05-21 00:35:12,007 [ scc.merge] INFO Merged PRs:
2024-05-21 00:35:12,007 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-05-21 00:35:12,007 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-05-21 00:35:12,007 [ scc.merge] INFO
2024-05-21 00:35:12,007 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-05-21 00:35:12,007 [ scc.git] DEBUG Calling 'git remote'
2024-05-21 00:35:12,012 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-05-21 00:35:12,012 [ scc.git] DEBUG Calling 'git remote'
2024-05-21 00:35:12,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-21 00:35:12,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-05-21 00:35:12,017 [ scc.git] DEBUG Calling 'git remote'
2024-05-21 00:35:12,022 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-21 00:35:12,022 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-05-21 00:35:12,022 [ scc.git] DEBUG Calling 'git remote'
2024-05-21 00:35:12,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-21 00:35:12,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-05-21 00:35:12,027 [ scc.git] DEBUG Calling 'git remote'
2024-05-21 00:35:12,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-21 00:35:12,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-05-21 00:35:12,032 [ scc.git] DEBUG Calling 'git remote'
2024-05-21 00:35:12,036 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 53a327b8
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 5a90893
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from c6314d8a9
nothing to commit, working tree clean
HEAD detached from 43f3613
nothing to commit, working tree clean
2024-05-21 00:35:41,488 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
![[Jenkins]](/jenkins/static/d0200910/images/svgs/logo.svg){kind=logo}
