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+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-05-25 00:34:00,248 [  scc.config] DEBUG Found github.token
2024-05-25 00:34:00,251 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-05-25 00:34:00,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:34:00,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:34:01,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-05-25 00:34:01,267 [      scc.gh] DEBUG 4998 remaining from 5000 (Reset at 01:05
2024-05-25 00:34:01,268 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-25 00:34:01,272 [     scc.git] DEBUG Check current status
2024-05-25 00:34:01,272 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-25 00:34:01,276 [     scc.git] DEBUG c5de36a Merge pull request #281 from ome/dependabot/submodules/omero-web-9c94fd4
2024-05-25 00:34:01,276 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-25 00:34:01,323 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-25 00:34:01,325 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-25 00:34:01,394 [     scc.git] DEBUG  53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-25 00:34:01,398 [     scc.git] DEBUG  5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-25 00:34:01,402 [     scc.git] DEBUG  9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-05-25 00:34:01,407 [  scc.config] DEBUG Found remote.origin.url
2024-05-25 00:34:01,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-05-25 00:34:02,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-25 00:34:02,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-25 00:34:03,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-25 00:34:03,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-25 00:34:03,505 [     scc.git] DEBUG Resetting...
2024-05-25 00:34:03,505 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-05-25 00:34:03,511 [     scc.git] DEBUG HEAD is now at c5de36a Merge pull request #281 from ome/dependabot/submodules/omero-web-9c94fd4
2024-05-25 00:34:03,512 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-05-25 00:34:03,563 [     scc.git] DEBUG Check current status
2024-05-25 00:34:03,563 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-25 00:34:03,567 [     scc.git] DEBUG c5de36a Merge pull request #281 from ome/dependabot/submodules/omero-web-9c94fd4
2024-05-25 00:34:03,567 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-25 00:34:03,608 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-25 00:34:03,610 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-25 00:34:03,614 [     scc.git] DEBUG  53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-25 00:34:03,617 [     scc.git] DEBUG  5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-25 00:34:03,621 [     scc.git] DEBUG  9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-05-25 00:34:03,621 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-05-25 00:34:03,622 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-05-25 00:34:03,622 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-05-25 00:34:03,622 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-05-25 00:34:03,622 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-05-25 00:34:03,622 [    scc.repo] DEBUG ## PRs found:
2024-05-25 00:34:03,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-05-25 00:34:03,942 [    scc.repo] DEBUG ## Branches found:
2024-05-25 00:34:03,943 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:34:03,943 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:34:03,947 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-25 00:34:03,951 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-25 00:34:03,951 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-25 00:34:03,955 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-25 00:34:03,959 [     scc.git] DEBUG Already up to date.

2024-05-25 00:34:03,959 [     scc.git] DEBUG ## Unique users: []
2024-05-25 00:34:03,959 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:34:03,959 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:34:03,963 [     scc.git] DEBUG Calling 'git submodule update'
2024-05-25 00:34:04,007 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:34:04,007 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:34:04,011 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-05-25 00:34:04,305 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f4aa419b130> has no local changes
2024-05-25 00:34:04,306 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-python-superbuild
Already up to date.


Generated by OMERO-python-superbuild-push#72 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/72/)'
2024-05-25 00:34:04,331 [     scc.git] DEBUG [detached HEAD eb4e29d] merge master -Dorg -Snone
2024-05-25 00:34:04,331 [   scc.merge] INFO  Repository: ome/omero-python-superbuild
2024-05-25 00:34:04,331 [   scc.merge] INFO  Already up to date.
2024-05-25 00:34:04,331 [   scc.merge] INFO  
2024-05-25 00:34:04,331 [   scc.merge] INFO  
2024-05-25 00:34:04,331 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-05-25 00:34:04,331 [     scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master

submodules:
  omero-scripts:
    base-branch: develop
2024-05-25 00:34:06,886 [  scc.config] DEBUG Found github.token
2024-05-25 00:34:06,889 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-05-25 00:34:07,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:34:07,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:34:07,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-05-25 00:34:07,891 [      scc.gh] DEBUG 4990 remaining from 5000 (Reset at 01:05
2024-05-25 00:34:07,892 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-25 00:34:07,896 [     scc.git] DEBUG Check current status
2024-05-25 00:34:07,896 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-25 00:34:07,900 [     scc.git] DEBUG eb4e29d merge master -Dorg -Snone
2024-05-25 00:34:07,900 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-25 00:34:07,943 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-25 00:34:07,946 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-25 00:34:07,950 [     scc.git] DEBUG  53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-25 00:34:07,954 [     scc.git] DEBUG  5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-25 00:34:07,957 [     scc.git] DEBUG  9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-05-25 00:34:07,962 [  scc.config] DEBUG Found remote.origin.url
2024-05-25 00:34:07,963 [     scc.git] DEBUG Reading repository configuration from repositories.yml
2024-05-25 00:34:07,964 [     scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
  omero-scripts:
    base-branch: develop

2024-05-25 00:34:08,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-05-25 00:34:08,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-25 00:34:09,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-25 00:34:09,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-25 00:34:10,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-25 00:34:10,161 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-25 00:34:10,220 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-05-25 00:34:10,220 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-25 00:34:10,225 [     scc.git] DEBUG Check current status
2024-05-25 00:34:10,225 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-25 00:34:10,230 [     scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-05-25 00:34:10,231 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-25 00:34:10,277 [  scc.config] DEBUG Found remote.origin.url
2024-05-25 00:34:10,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-05-25 00:34:11,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-25 00:34:11,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-25 00:34:11,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-25 00:34:12,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-25 00:34:12,330 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-25 00:34:12,379 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-25 00:34:12,380 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-05-25 00:34:12,380 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-25 00:34:12,385 [     scc.git] DEBUG Check current status
2024-05-25 00:34:12,386 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-25 00:34:12,391 [     scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-05-25 00:34:12,391 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-25 00:34:12,445 [  scc.config] DEBUG Found remote.origin.url
2024-05-25 00:34:12,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-05-25 00:34:13,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-25 00:34:13,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-25 00:34:14,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-25 00:34:14,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-25 00:34:14,467 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-25 00:34:14,511 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-25 00:34:14,513 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-05-25 00:34:14,513 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-25 00:34:14,517 [     scc.git] DEBUG Check current status
2024-05-25 00:34:14,518 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-25 00:34:14,534 [     scc.git] DEBUG 53a327b8 Merge pull request #407 from jburel/install_conda_forge
2024-05-25 00:34:14,534 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-25 00:34:14,581 [  scc.config] DEBUG Found remote.origin.url
2024-05-25 00:34:14,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-05-25 00:34:15,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-25 00:34:15,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-25 00:34:16,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-25 00:34:16,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-25 00:34:16,646 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-25 00:34:16,693 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-25 00:34:16,694 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-05-25 00:34:16,694 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-25 00:34:16,699 [     scc.git] DEBUG Check current status
2024-05-25 00:34:16,699 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-25 00:34:16,721 [     scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-05-25 00:34:16,721 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-25 00:34:16,771 [  scc.config] DEBUG Found remote.origin.url
2024-05-25 00:34:16,772 [     scc.git] DEBUG Repository configuration:
base-branch: develop

2024-05-25 00:34:17,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-05-25 00:34:17,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-25 00:34:18,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-25 00:34:18,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-25 00:34:18,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-25 00:34:18,862 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-25 00:34:18,904 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-25 00:34:18,905 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-05-25 00:34:18,906 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-25 00:34:18,911 [     scc.git] DEBUG Check current status
2024-05-25 00:34:18,912 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-25 00:34:18,924 [     scc.git] DEBUG 9c94fd493 Bump version: 5.26.0 → 5.26.1.dev0
2024-05-25 00:34:18,924 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-25 00:34:18,971 [  scc.config] DEBUG Found remote.origin.url
2024-05-25 00:34:19,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-05-25 00:34:19,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-25 00:34:20,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-25 00:34:20,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-25 00:34:21,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-25 00:34:21,079 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-25 00:34:21,122 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-25 00:34:21,123 [     scc.git] DEBUG Resetting...
2024-05-25 00:34:21,123 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-05-25 00:34:21,130 [     scc.git] DEBUG HEAD is now at eb4e29d merge master -Dorg -Snone
2024-05-25 00:34:21,130 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-05-25 00:34:21,189 [     scc.git] DEBUG Check current status
2024-05-25 00:34:21,190 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-25 00:34:21,195 [     scc.git] DEBUG eb4e29d merge master -Dorg -Snone
2024-05-25 00:34:21,196 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-25 00:34:21,245 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-25 00:34:21,248 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-25 00:34:21,252 [     scc.git] DEBUG  53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-25 00:34:21,256 [     scc.git] DEBUG  5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-25 00:34:21,259 [     scc.git] DEBUG  9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-05-25 00:34:21,261 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-05-25 00:34:21,261 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-05-25 00:34:21,261 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-05-25 00:34:21,261 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-05-25 00:34:21,261 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-05-25 00:34:21,261 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2024-05-25 00:34:21,261 [    scc.repo] DEBUG ## PRs found:
2024-05-25 00:34:21,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-05-25 00:34:21,522 [    scc.repo] DEBUG ## Branches found:
2024-05-25 00:34:21,522 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:34:21,522 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:34:21,531 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-25 00:34:21,543 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-25 00:34:21,544 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-25 00:34:21,553 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-25 00:34:21,559 [     scc.git] DEBUG Already up to date.

2024-05-25 00:34:21,559 [     scc.git] DEBUG ## Unique users: []
2024-05-25 00:34:21,559 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:34:21,560 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:34:21,564 [     scc.git] DEBUG Calling 'git submodule update'
2024-05-25 00:34:21,613 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:34:21,613 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:34:21,619 [    scc.repo] DEBUG ## PRs found:
2024-05-25 00:34:22,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-05-25 00:34:22,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-05-25 00:34:23,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-05-25 00:34:23,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-05-25 00:34:24,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-25 00:34:24,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-05-25 00:34:24,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-05-25 00:34:24,943 [    scc.repo] DEBUG   - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-05-25 00:34:24,943 [    scc.repo] DEBUG ## Branches found:
2024-05-25 00:34:24,943 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-05-25 00:34:24,943 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:34:24,943 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:34:24,949 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-25 00:34:24,953 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-25 00:34:24,954 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-25 00:34:24,958 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-25 00:34:24,963 [     scc.git] DEBUG Already up to date.

2024-05-25 00:34:24,963 [     scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-05-25 00:34:25,379 [     scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-05-25 00:34:25,380 [     scc.git] DEBUG  * branch            refs/pull/16/head -> FETCH_HEAD
2024-05-25 00:34:25,385 [     scc.git] DEBUG ## Unique users: []
2024-05-25 00:34:25,385 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:34:25,386 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:34:25,390 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-05-25 00:34:25,396 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:34:25,402 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-05-25 00:34:25,469 [     scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-05-25 00:34:25,469 [     scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-05-25 00:34:25,469 [     scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-05-25 00:34:25,469 [     scc.git] DEBUG Auto-merging src/fsLists.py
2024-05-25 00:34:25,469 [     scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-05-25 00:34:25,470 [     scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-05-25 00:34:25,470 [     scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-05-25 00:34:25,470 [     scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-05-25 00:34:25,470 [     scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-05-25 00:34:25,470 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-25 00:34:25,474 [     scc.git] DEBUG  src/fsAbstractPlatformMonitor.py |  6 +++---
2024-05-25 00:34:25,474 [     scc.git] DEBUG  src/fsDirectory.py               | 46 ++++++++++++++++++++--------------------
2024-05-25 00:34:25,474 [     scc.git] DEBUG  src/fsDropBox.py                 | 24 ++++++++++-----------
2024-05-25 00:34:25,474 [     scc.git] DEBUG  src/fsLists.py                   | 14 ++++++------
2024-05-25 00:34:25,474 [     scc.git] DEBUG  src/fsMac-10-5-Monitor.py        | 10 ++++-----
2024-05-25 00:34:25,474 [     scc.git] DEBUG  src/fsMonitor.py                 | 24 ++++++++++-----------
2024-05-25 00:34:25,476 [     scc.git] DEBUG  src/fsMonitorServer.py           | 10 ++++-----
2024-05-25 00:34:25,476 [     scc.git] DEBUG  src/fsPyinotifyMonitor.py        |  8 +++----
2024-05-25 00:34:25,476 [     scc.git] DEBUG  src/fsWin-XP-Monitor.py          | 20 ++++++++---------
2024-05-25 00:34:25,476 [     scc.git] DEBUG  9 files changed, 81 insertions(+), 81 deletions(-)
2024-05-25 00:34:25,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:34:25,630 [     scc.git] DEBUG Calling 'git submodule update'
2024-05-25 00:34:25,674 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:34:25,674 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:34:25,679 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-25 00:34:25,723 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-05-25 00:34:25,729 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f72131eed60> has no local changes
2024-05-25 00:34:25,730 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-dropbox
Already up to date.

Merged PRs:
  - PR 16 joshmoore 'Review all instances of whitelist/blacklist'

Generated by OMERO-python-superbuild-push#72 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/72/)'
2024-05-25 00:34:25,738 [     scc.git] DEBUG [detached HEAD 34a1d86] merge master -Dorg -Ssuccess-only
2024-05-25 00:34:25,738 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-25 00:34:25,739 [    scc.repo] DEBUG ## PRs found:
2024-05-25 00:34:26,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-05-25 00:34:26,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-05-25 00:34:27,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-05-25 00:34:27,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-05-25 00:34:28,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-25 00:34:28,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-25 00:34:29,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-05-25 00:34:29,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-05-25 00:34:29,473 [    scc.repo] DEBUG   - PR 69 will-moore 'Roi encoder allows Shape None'
2024-05-25 00:34:29,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-05-25 00:34:30,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-05-25 00:34:30,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-05-25 00:34:31,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-05-25 00:34:31,269 [    scc.repo] DEBUG ## Branches found:
2024-05-25 00:34:31,269 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-05-25 00:34:31,269 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:34:31,269 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:34:31,274 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-25 00:34:31,279 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-25 00:34:31,279 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-25 00:34:31,284 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-25 00:34:31,290 [     scc.git] DEBUG Already up to date.

2024-05-25 00:34:31,291 [     scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-05-25 00:34:31,780 [     scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-05-25 00:34:31,780 [     scc.git] DEBUG  * branch            refs/pull/69/head -> FETCH_HEAD
2024-05-25 00:34:31,786 [     scc.git] DEBUG ## Unique users: []
2024-05-25 00:34:31,786 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:34:31,786 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:34:31,792 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-05-25 00:34:31,798 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:34:31,804 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-05-25 00:34:31,831 [     scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-05-25 00:34:31,846 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-25 00:34:31,850 [     scc.git] DEBUG  omero_marshal/encode/encoders/roi.py | 5 +++--
2024-05-25 00:34:31,850 [     scc.git] DEBUG  tests/unit/conftest.py               | 5 ++++-
2024-05-25 00:34:31,850 [     scc.git] DEBUG  2 files changed, 7 insertions(+), 3 deletions(-)
2024-05-25 00:34:32,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:34:32,015 [     scc.git] DEBUG Calling 'git submodule update'
2024-05-25 00:34:32,070 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:34:32,070 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:34:32,075 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-25 00:34:32,140 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-05-25 00:34:32,146 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f72131f3d90> has no local changes
2024-05-25 00:34:32,147 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-marshal
Excluded PRs:
  - PR 34 chris-allan 'Initial support for Event' (exclude comment)
  - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.

Merged PRs:
  - PR 69 will-moore 'Roi encoder allows Shape None'

Generated by OMERO-python-superbuild-push#72 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/72/)'
2024-05-25 00:34:32,155 [     scc.git] DEBUG [detached HEAD 7ed6601] merge master -Dorg -Ssuccess-only
2024-05-25 00:34:32,155 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-25 00:34:32,155 [    scc.repo] DEBUG ## PRs found:
2024-05-25 00:34:32,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-05-25 00:34:33,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-05-25 00:34:33,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-05-25 00:34:34,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-05-25 00:34:34,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-25 00:34:35,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-25 00:34:35,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-05-25 00:34:36,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-05-25 00:34:36,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-05-25 00:34:37,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-05-25 00:34:37,077 [    scc.repo] DEBUG   - PR 408 jburel 'remove deprecated method'
2024-05-25 00:34:37,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-05-25 00:34:37,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-05-25 00:34:38,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-05-25 00:34:39,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-25 00:34:39,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-25 00:34:39,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-05-25 00:34:40,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-05-25 00:34:40,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-25 00:34:41,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-25 00:34:41,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-05-25 00:34:42,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-05-25 00:34:42,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-05-25 00:34:43,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-05-25 00:34:43,306 [    scc.repo] DEBUG   - PR 391 joshmoore 'Add jstack command'
2024-05-25 00:34:43,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-05-25 00:34:43,763 [    scc.repo] DEBUG   # ... Exclude label: exclude
2024-05-25 00:34:44,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378 HTTP/1.1" 200 None
2024-05-25 00:34:44,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378/comments HTTP/1.1" 200 None
2024-05-25 00:34:45,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-05-25 00:34:45,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-05-25 00:34:46,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-05-25 00:34:46,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-25 00:34:47,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-05-25 00:34:47,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-05-25 00:34:47,529 [    scc.repo] DEBUG   - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-05-25 00:34:47,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-05-25 00:34:48,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-05-25 00:34:49,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-05-25 00:34:49,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-25 00:34:49,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-25 00:34:50,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-05-25 00:34:50,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-05-25 00:34:51,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-05-25 00:34:51,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-05-25 00:34:51,718 [    scc.repo] DEBUG   - PR 332 jburel 'Build conda'
2024-05-25 00:34:52,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-05-25 00:34:52,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-05-25 00:34:53,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-05-25 00:34:53,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-05-25 00:34:54,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-05-25 00:34:54,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-25 00:34:55,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-05-25 00:34:55,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-05-25 00:34:55,465 [    scc.repo] DEBUG   - PR 299 joshmoore 'Add parents and children to omero obj'
2024-05-25 00:34:55,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-05-25 00:34:56,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-05-25 00:34:56,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-25 00:34:57,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-05-25 00:34:57,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-05-25 00:34:57,754 [    scc.repo] DEBUG   - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-05-25 00:34:58,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-05-25 00:34:58,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-05-25 00:34:59,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-05-25 00:34:59,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-25 00:35:00,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-05-25 00:35:00,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-05-25 00:35:00,612 [    scc.repo] DEBUG   - PR 207 manics 'BlitzGateway.connect raise on error'
2024-05-25 00:35:01,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-05-25 00:35:01,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-05-25 00:35:02,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-05-25 00:35:02,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-25 00:35:03,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-05-25 00:35:03,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-05-25 00:35:03,485 [    scc.repo] DEBUG   - PR 199 joshmoore 'user: allow setting default group'
2024-05-25 00:35:03,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-05-25 00:35:04,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-05-25 00:35:04,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-05-25 00:35:05,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-05-25 00:35:05,309 [    scc.repo] DEBUG ## Branches found:
2024-05-25 00:35:05,310 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-05-25 00:35:05,310 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:35:05,311 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:05,316 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-25 00:35:05,321 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-25 00:35:05,322 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-25 00:35:05,328 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-25 00:35:05,335 [     scc.git] DEBUG Already up to date.

2024-05-25 00:35:05,335 [     scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-05-25 00:35:05,863 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-25 00:35:05,863 [     scc.git] DEBUG  * branch              refs/pull/199/head -> FETCH_HEAD
2024-05-25 00:35:05,868 [     scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-05-25 00:35:06,281 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-25 00:35:06,281 [     scc.git] DEBUG  * branch              refs/pull/207/head -> FETCH_HEAD
2024-05-25 00:35:06,287 [     scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-05-25 00:35:06,771 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-25 00:35:06,771 [     scc.git] DEBUG  * branch              refs/pull/266/head -> FETCH_HEAD
2024-05-25 00:35:06,777 [     scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-05-25 00:35:07,188 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-25 00:35:07,188 [     scc.git] DEBUG  * branch              refs/pull/299/head -> FETCH_HEAD
2024-05-25 00:35:07,194 [     scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-05-25 00:35:07,603 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-25 00:35:07,603 [     scc.git] DEBUG  * branch              refs/pull/332/head -> FETCH_HEAD
2024-05-25 00:35:07,608 [     scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-05-25 00:35:07,992 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-25 00:35:07,992 [     scc.git] DEBUG  * branch              refs/pull/337/head -> FETCH_HEAD
2024-05-25 00:35:07,997 [     scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-05-25 00:35:08,405 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-25 00:35:08,405 [     scc.git] DEBUG  * branch              refs/pull/391/head -> FETCH_HEAD
2024-05-25 00:35:08,410 [     scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-05-25 00:35:08,846 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-25 00:35:08,846 [     scc.git] DEBUG  * branch              refs/pull/408/head -> FETCH_HEAD
2024-05-25 00:35:08,852 [     scc.git] DEBUG ## Unique users: []
2024-05-25 00:35:08,852 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:35:08,852 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:08,857 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-05-25 00:35:08,869 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:08,873 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-05-25 00:35:08,894 [     scc.git] DEBUG Auto-merging src/omero/cli.py
2024-05-25 00:35:08,894 [     scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-05-25 00:35:08,895 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-25 00:35:08,899 [     scc.git] DEBUG  src/omero/cli.py          |  6 ++++++
2024-05-25 00:35:08,899 [     scc.git] DEBUG  src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-05-25 00:35:08,899 [     scc.git] DEBUG  2 files changed, 39 insertions(+), 3 deletions(-)
2024-05-25 00:35:09,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:35:09,057 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-05-25 00:35:09,069 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:09,074 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-05-25 00:35:09,268 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-05-25 00:35:09,269 [     scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-05-25 00:35:09,285 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-25 00:35:09,296 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-05-25 00:35:09,296 [     scc.git] DEBUG  test/unit/test_gateway.py     | 16 ++++++++++++++++
2024-05-25 00:35:09,296 [     scc.git] DEBUG  2 files changed, 29 insertions(+), 6 deletions(-)
2024-05-25 00:35:09,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:35:09,460 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-05-25 00:35:09,471 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:09,475 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-05-25 00:35:09,495 [     scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-05-25 00:35:09,497 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-25 00:35:09,500 [     scc.git] DEBUG  src/omero/plugins/search.py | 13 +++++++++----
2024-05-25 00:35:09,500 [     scc.git] DEBUG  1 file changed, 9 insertions(+), 4 deletions(-)
2024-05-25 00:35:09,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:35:09,873 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-05-25 00:35:09,884 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:09,889 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-05-25 00:35:09,911 [     scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-05-25 00:35:09,911 [     scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-05-25 00:35:09,912 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-25 00:35:09,916 [     scc.git] DEBUG  src/omero/plugins/obj.py      | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-05-25 00:35:09,916 [     scc.git] DEBUG  test/unit/clitest/test_obj.py |  2 +-
2024-05-25 00:35:09,916 [     scc.git] DEBUG  2 files changed, 69 insertions(+), 2 deletions(-)
2024-05-25 00:35:10,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:35:10,285 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-05-25 00:35:10,297 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:10,301 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-05-25 00:35:10,321 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-25 00:35:10,324 [     scc.git] DEBUG  .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-05-25 00:35:10,324 [     scc.git] DEBUG  connect.py                    | 11 +++++++++++
2024-05-25 00:35:10,324 [     scc.git] DEBUG  2 files changed, 48 insertions(+)
2024-05-25 00:35:10,324 [     scc.git] DEBUG  create mode 100644 .github/workflows/install.yml
2024-05-25 00:35:10,324 [     scc.git] DEBUG  create mode 100644 connect.py
2024-05-25 00:35:10,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:35:10,701 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-05-25 00:35:10,714 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:10,719 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-05-25 00:35:10,737 [     scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-05-25 00:35:10,738 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-25 00:35:10,741 [     scc.git] DEBUG  src/omero/plugins/import.py | 2 ++
2024-05-25 00:35:10,741 [     scc.git] DEBUG  1 file changed, 2 insertions(+)
2024-05-25 00:35:11,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:35:11,139 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-05-25 00:35:11,151 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:11,156 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-05-25 00:35:11,175 [     scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-05-25 00:35:11,177 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-25 00:35:11,180 [     scc.git] DEBUG  src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-05-25 00:35:11,180 [     scc.git] DEBUG  1 file changed, 59 insertions(+), 2 deletions(-)
2024-05-25 00:35:11,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:35:11,546 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-05-25 00:35:11,557 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:11,562 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-05-25 00:35:11,636 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-05-25 00:35:11,637 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-25 00:35:11,644 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 36 ------------------------------------
2024-05-25 00:35:11,644 [     scc.git] DEBUG  1 file changed, 36 deletions(-)
2024-05-25 00:35:11,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:35:11,948 [     scc.git] DEBUG Calling 'git submodule update'
2024-05-25 00:35:11,990 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:35:11,991 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:11,995 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-25 00:35:12,041 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-05-25 00:35:12,051 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7213262340> has no local changes
2024-05-25 00:35:12,051 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-py
Excluded PRs:
  - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
  - PR 387 will-moore 'Numpy pixels type' (label: exclude)
  - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
  - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
  - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
  - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.

Merged PRs:
  - PR 199 joshmoore 'user: allow setting default group'
  - PR 207 manics 'BlitzGateway.connect raise on error'
  - PR 266 joshmoore 'errors: use raise_error from cli plugins'
  - PR 299 joshmoore 'Add parents and children to omero obj'
  - PR 332 jburel 'Build conda'
  - PR 337 will-moore 'bulk.yml depth is passed to xargs'
  - PR 391 joshmoore 'Add jstack command'
  - PR 408 jburel 'remove deprecated method'

Generated by OMERO-python-superbuild-push#72 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/72/)'
2024-05-25 00:35:12,060 [     scc.git] DEBUG [detached HEAD 8ef7ee0f] merge master -Dorg -Ssuccess-only
2024-05-25 00:35:12,060 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-25 00:35:12,061 [     scc.git] INFO  Overriding base-branch from master to develop
2024-05-25 00:35:12,061 [    scc.repo] DEBUG ## PRs found:
2024-05-25 00:35:12,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-05-25 00:35:13,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-05-25 00:35:13,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-05-25 00:35:13,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-05-25 00:35:14,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-05-25 00:35:14,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-05-25 00:35:15,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-05-25 00:35:15,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-05-25 00:35:16,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-25 00:35:16,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-05-25 00:35:17,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-05-25 00:35:17,288 [    scc.repo] DEBUG   - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-05-25 00:35:17,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-05-25 00:35:18,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-05-25 00:35:18,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-05-25 00:35:19,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-05-25 00:35:19,218 [    scc.repo] DEBUG ## Branches found:
2024-05-25 00:35:19,218 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-05-25 00:35:19,219 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:35:19,219 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:19,224 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-05-25 00:35:19,229 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-25 00:35:19,229 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-05-25 00:35:19,235 [     scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-05-25 00:35:19,240 [     scc.git] DEBUG Already up to date.

2024-05-25 00:35:19,241 [     scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-05-25 00:35:19,700 [     scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-05-25 00:35:19,700 [     scc.git] DEBUG  * branch            refs/pull/202/head -> FETCH_HEAD
2024-05-25 00:35:19,706 [     scc.git] DEBUG ## Unique users: []
2024-05-25 00:35:19,706 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:35:19,706 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:19,713 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-05-25 00:35:19,720 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:19,726 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-05-25 00:35:19,768 [     scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-05-25 00:35:19,768 [     scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-05-25 00:35:19,769 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-05-25 00:35:19,769 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-05-25 00:35:19,776 [     scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a'
2024-05-25 00:35:19,783 [     scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-05-25 00:35:19,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:35:19,940 [     scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-05-25 00:35:19,948 [     scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a'
2024-05-25 00:35:19,953 [     scc.git] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#72](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/72/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/72/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - omero/annotation_scripts/KeyVal_to_csv.py

--conflicts

2024-05-25 00:35:19,957 [  scc.config] DEBUG Found github.token
2024-05-25 00:35:19,958 [     scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-05-25 00:35:19,958 [     scc.git] DEBUG Calling 'git submodule update'
2024-05-25 00:35:19,995 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:35:19,996 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:20,000 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-25 00:35:20,038 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-05-25 00:35:20,044 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f72121745e0> has no local changes
2024-05-25 00:35:20,044 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Generated by OMERO-python-superbuild-push#72 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/72/)'
2024-05-25 00:35:20,052 [     scc.git] DEBUG [detached HEAD 2e3a7cb] merge master -Dorg -Ssuccess-only
2024-05-25 00:35:20,052 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-25 00:35:20,053 [    scc.repo] DEBUG ## PRs found:
2024-05-25 00:35:20,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-05-25 00:35:20,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554 HTTP/1.1" 200 None
2024-05-25 00:35:21,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-05-25 00:35:21,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-05-25 00:35:22,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-05-25 00:35:22,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-05-25 00:35:23,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-25 00:35:23,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-25 00:35:24,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-05-25 00:35:24,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-05-25 00:35:25,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-05-25 00:35:25,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-05-25 00:35:25,652 [    scc.repo] DEBUG   - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-05-25 00:35:26,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-05-25 00:35:26,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-05-25 00:35:27,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-05-25 00:35:27,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-25 00:35:28,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-25 00:35:28,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-05-25 00:35:29,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-05-25 00:35:29,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-05-25 00:35:29,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-05-25 00:35:29,998 [    scc.repo] DEBUG   - PR 527 will-moore 'Add some initial CSP settings to test'
2024-05-25 00:35:30,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-05-25 00:35:30,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-05-25 00:35:31,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-05-25 00:35:31,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-25 00:35:32,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-25 00:35:32,474 [    scc.repo] DEBUG ## Branches found:
2024-05-25 00:35:32,475 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-05-25 00:35:32,475 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:35:32,475 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:32,479 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-25 00:35:32,483 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-25 00:35:32,484 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-25 00:35:32,488 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-25 00:35:32,493 [     scc.git] DEBUG Already up to date.

2024-05-25 00:35:32,493 [     scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-05-25 00:35:33,066 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-05-25 00:35:33,066 [     scc.git] DEBUG  * branch                refs/pull/527/head -> FETCH_HEAD
2024-05-25 00:35:33,072 [     scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-05-25 00:35:33,507 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-05-25 00:35:33,507 [     scc.git] DEBUG  * branch                refs/pull/534/head -> FETCH_HEAD
2024-05-25 00:35:33,512 [     scc.git] DEBUG ## Unique users: []
2024-05-25 00:35:33,513 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:35:33,513 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:33,518 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-05-25 00:35:33,525 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:33,530 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-05-25 00:35:33,614 [     scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-05-25 00:35:33,614 [     scc.git] DEBUG Auto-merging setup.py
2024-05-25 00:35:33,616 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-25 00:35:33,620 [     scc.git] DEBUG  omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-05-25 00:35:33,620 [     scc.git] DEBUG  setup.py             |  1 +
2024-05-25 00:35:33,620 [     scc.git] DEBUG  2 files changed, 42 insertions(+), 1 deletion(-)
2024-05-25 00:35:33,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:35:33,780 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-05-25 00:35:33,787 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:33,792 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-05-25 00:35:33,828 [     scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-05-25 00:35:33,828 [     scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-05-25 00:35:33,842 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-25 00:35:33,846 [     scc.git] DEBUG  omeroweb/webclient/webclient_gateway.py | 2 +-
2024-05-25 00:35:33,846 [     scc.git] DEBUG  omeroweb/webgateway/marshal.py          | 4 ++--
2024-05-25 00:35:33,846 [     scc.git] DEBUG  2 files changed, 3 insertions(+), 3 deletions(-)
2024-05-25 00:35:34,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:35:34,193 [     scc.git] DEBUG Calling 'git submodule update'
2024-05-25 00:35:34,238 [     scc.git] DEBUG Get sha1 of %s
2024-05-25 00:35:34,239 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-25 00:35:34,244 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-25 00:35:34,294 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-05-25 00:35:34,306 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f72100ff370> has no local changes
2024-05-25 00:35:34,307 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-web
Excluded PRs:
  - PR 555 chris-allan 'Archive status' (exclude comment)
  - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
  - PR 535 will-moore 'Initial working browser history' (stage: draft)
  - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.

Merged PRs:
  - PR 527 will-moore 'Add some initial CSP settings to test'
  - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'

Generated by OMERO-python-superbuild-push#72 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/72/)'
2024-05-25 00:35:34,318 [     scc.git] DEBUG [detached HEAD f495407f5] merge master -Dorg -Ssuccess-only
2024-05-25 00:35:34,318 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-25 00:35:34,319 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-25 00:35:34,370 [  scc.config] DEBUG Found submodule.omero-dropbox.url
2024-05-25 00:35:34,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:35:34,617 [  scc.config] DEBUG Found submodule.omero-marshal.url
2024-05-25 00:35:35,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:35:35,028 [  scc.config] DEBUG Found submodule.omero-py.url
2024-05-25 00:35:35,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:35:35,430 [  scc.config] DEBUG Found submodule.omero-scripts.url
2024-05-25 00:35:35,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:35:35,840 [  scc.config] DEBUG Found submodule.omero-web.url
2024-05-25 00:35:36,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-25 00:35:36,245 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-05-25 00:35:36,272 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f72134ba130> has local changes
2024-05-25 00:35:36,272 [     scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-python-superbuild
Already up to date.


Repository: ome/omero-dropbox
Already up to date.

Merged PRs:
  - PR 16 joshmoore 'Review all instances of whitelist/blacklist'

Repository: ome/omero-marshal
Excluded PRs:
  - PR 34 chris-allan 'Initial support for Event' (exclude comment)
  - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.

Merged PRs:
  - PR 69 will-moore 'Roi encoder allows Shape None'

Repository: ome/omero-py
Excluded PRs:
  - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
  - PR 387 will-moore 'Numpy pixels type' (label: exclude)
  - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
  - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
  - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
  - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.

Merged PRs:
  - PR 199 joshmoore 'user: allow setting default group'
  - PR 207 manics 'BlitzGateway.connect raise on error'
  - PR 266 joshmoore 'errors: use raise_error from cli plugins'
  - PR 299 joshmoore 'Add parents and children to omero obj'
  - PR 332 jburel 'Build conda'
  - PR 337 will-moore 'bulk.yml depth is passed to xargs'
  - PR 391 joshmoore 'Add jstack command'
  - PR 408 jburel 'remove deprecated method'

Repository: ome/omero-scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Repository: ome/omero-web
Excluded PRs:
  - PR 555 chris-allan 'Archive status' (exclude comment)
  - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
  - PR 535 will-moore 'Initial working browser history' (stage: draft)
  - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.

Merged PRs:
  - PR 527 will-moore 'Add some initial CSP settings to test'
  - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'

Generated by OMERO-python-superbuild-push#72 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/72/)'
2024-05-25 00:35:36,281 [     scc.git] DEBUG [detached HEAD 0ec48c4] merge master -Dorg -Ssuccess-only
2024-05-25 00:35:36,281 [   scc.merge] INFO  Repository: ome/omero-python-superbuild
2024-05-25 00:35:36,281 [     scc.git] DEBUG  6 files changed, 10 insertions(+), 10 deletions(-)
2024-05-25 00:35:36,281 [   scc.merge] INFO  Already up to date.
2024-05-25 00:35:36,282 [   scc.merge] INFO  
2024-05-25 00:35:36,282 [   scc.merge] INFO  
2024-05-25 00:35:36,282 [   scc.merge] INFO  Repository: ome/omero-dropbox
2024-05-25 00:35:36,282 [   scc.merge] INFO  Already up to date.
2024-05-25 00:35:36,282 [   scc.merge] INFO  
2024-05-25 00:35:36,282 [   scc.merge] INFO  Merged PRs:
2024-05-25 00:35:36,282 [   scc.merge] INFO    - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-05-25 00:35:36,282 [   scc.merge] INFO  
2024-05-25 00:35:36,282 [   scc.merge] INFO  Repository: ome/omero-marshal
2024-05-25 00:35:36,282 [   scc.merge] INFO  Excluded PRs:
2024-05-25 00:35:36,282 [   scc.merge] INFO    - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-05-25 00:35:36,282 [   scc.merge] INFO    - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-05-25 00:35:36,282 [   scc.merge] INFO  Already up to date.
2024-05-25 00:35:36,282 [   scc.merge] INFO  
2024-05-25 00:35:36,282 [   scc.merge] INFO  Merged PRs:
2024-05-25 00:35:36,282 [   scc.merge] INFO    - PR 69 will-moore 'Roi encoder allows Shape None'
2024-05-25 00:35:36,282 [   scc.merge] INFO  
2024-05-25 00:35:36,282 [   scc.merge] INFO  Repository: ome/omero-py
2024-05-25 00:35:36,282 [   scc.merge] INFO  Excluded PRs:
2024-05-25 00:35:36,282 [   scc.merge] INFO    - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-05-25 00:35:36,282 [   scc.merge] INFO    - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-05-25 00:35:36,282 [   scc.merge] INFO    - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
2024-05-25 00:35:36,282 [   scc.merge] INFO    - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-05-25 00:35:36,282 [   scc.merge] INFO    - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-05-25 00:35:36,282 [   scc.merge] INFO    - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-05-25 00:35:36,282 [   scc.merge] INFO  Already up to date.
2024-05-25 00:35:36,282 [   scc.merge] INFO  
2024-05-25 00:35:36,282 [   scc.merge] INFO  Merged PRs:
2024-05-25 00:35:36,282 [   scc.merge] INFO    - PR 199 joshmoore 'user: allow setting default group'
2024-05-25 00:35:36,282 [   scc.merge] INFO    - PR 207 manics 'BlitzGateway.connect raise on error'
2024-05-25 00:35:36,283 [   scc.merge] INFO    - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-05-25 00:35:36,283 [   scc.merge] INFO    - PR 299 joshmoore 'Add parents and children to omero obj'
2024-05-25 00:35:36,283 [   scc.merge] INFO    - PR 332 jburel 'Build conda'
2024-05-25 00:35:36,283 [   scc.merge] INFO    - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-05-25 00:35:36,283 [   scc.merge] INFO    - PR 391 joshmoore 'Add jstack command'
2024-05-25 00:35:36,283 [   scc.merge] INFO    - PR 408 jburel 'remove deprecated method'
2024-05-25 00:35:36,283 [   scc.merge] INFO  
2024-05-25 00:35:36,283 [   scc.merge] INFO  Repository: ome/omero-scripts
2024-05-25 00:35:36,283 [   scc.merge] INFO  Excluded PRs:
2024-05-25 00:35:36,283 [   scc.merge] INFO    - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-05-25 00:35:36,283 [   scc.merge] INFO    - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-05-25 00:35:36,283 [   scc.merge] INFO    - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-05-25 00:35:36,283 [   scc.merge] INFO    - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-05-25 00:35:36,283 [   scc.merge] INFO  Already up to date.
2024-05-25 00:35:36,283 [   scc.merge] INFO  
2024-05-25 00:35:36,283 [   scc.merge] INFO  Conflicting PRs (not included):
2024-05-25 00:35:36,283 [   scc.merge] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-05-25 00:35:36,283 [   scc.merge] INFO  
2024-05-25 00:35:36,283 [   scc.merge] INFO  Repository: ome/omero-web
2024-05-25 00:35:36,283 [   scc.merge] INFO  Excluded PRs:
2024-05-25 00:35:36,283 [   scc.merge] INFO    - PR 555 chris-allan 'Archive status' (exclude comment)
2024-05-25 00:35:36,283 [   scc.merge] INFO    - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
2024-05-25 00:35:36,283 [   scc.merge] INFO    - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-05-25 00:35:36,283 [   scc.merge] INFO    - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-05-25 00:35:36,283 [   scc.merge] INFO  Already up to date.
2024-05-25 00:35:36,283 [   scc.merge] INFO  
2024-05-25 00:35:36,283 [   scc.merge] INFO  Merged PRs:
2024-05-25 00:35:36,283 [   scc.merge] INFO    - PR 527 will-moore 'Add some initial CSP settings to test'
2024-05-25 00:35:36,283 [   scc.merge] INFO    - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-05-25 00:35:36,283 [   scc.merge] INFO  
2024-05-25 00:35:36,283 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-05-25 00:35:36,284 [     scc.git] DEBUG Calling 'git remote'
2024-05-25 00:35:36,288 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-05-25 00:35:36,289 [     scc.git] DEBUG Calling 'git remote'
2024-05-25 00:35:36,292 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-25 00:35:36,293 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-05-25 00:35:36,293 [     scc.git] DEBUG Calling 'git remote'
2024-05-25 00:35:36,298 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-25 00:35:36,298 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-05-25 00:35:36,298 [     scc.git] DEBUG Calling 'git remote'
2024-05-25 00:35:36,303 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-25 00:35:36,304 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-05-25 00:35:36,304 [     scc.git] DEBUG Calling 'git remote'
2024-05-25 00:35:36,308 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-25 00:35:36,308 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-05-25 00:35:36,308 [     scc.git] DEBUG Calling 'git remote'
2024-05-25 00:35:36,312 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
    download_blitz_target()
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
    resp = urlopen(loc)
  File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
    return opener.open(url, data, timeout)
  File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
    response = meth(req, response)
  File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
    response = self.parent.error(
  File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
    return self._call_chain(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
    result = func(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
    raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
    download_blitz_target()
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
    resp = urlopen(loc)
  File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
    return opener.open(url, data, timeout)
  File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
    response = meth(req, response)
  File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
    response = self.parent.error(
  File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
    return self._call_chain(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
    result = func(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
    raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 53a327b8
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 5a90893
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 9c94fd493
nothing to commit, working tree clean
HEAD detached from c5de36a
nothing to commit, working tree clean
2024-05-25 00:36:06,317 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci