Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-06-01 00:35:17,835 [ scc.config] DEBUG Found github.token
2024-06-01 00:35:17,838 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-06-01 00:35:18,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:35:18,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:35:18,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-06-01 00:35:18,853 [ scc.gh] DEBUG 2863 remaining from 5000 (Reset at 00:06
2024-06-01 00:35:18,854 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-01 00:35:18,858 [ scc.git] DEBUG Check current status
2024-06-01 00:35:18,858 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-01 00:35:18,862 [ scc.git] DEBUG 05f561e Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542
2024-06-01 00:35:18,862 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-01 00:35:18,903 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-06-01 00:35:18,905 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-06-01 00:35:19,063 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421)
2024-06-01 00:35:19,067 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-06-01 00:35:19,070 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-06-01 00:35:19,078 [ scc.config] DEBUG Found remote.origin.url
2024-06-01 00:35:19,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-06-01 00:35:19,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-01 00:35:20,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-01 00:35:20,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-01 00:35:21,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-01 00:35:21,059 [ scc.git] DEBUG Resetting...
2024-06-01 00:35:21,060 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-06-01 00:35:21,066 [ scc.git] DEBUG HEAD is now at 05f561e Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542
2024-06-01 00:35:21,067 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-06-01 00:35:21,128 [ scc.git] DEBUG Check current status
2024-06-01 00:35:21,129 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-01 00:35:21,133 [ scc.git] DEBUG 05f561e Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542
2024-06-01 00:35:21,134 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-01 00:35:21,182 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-06-01 00:35:21,185 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-06-01 00:35:21,189 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421)
2024-06-01 00:35:21,194 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-06-01 00:35:21,197 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-06-01 00:35:21,198 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-06-01 00:35:21,198 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-06-01 00:35:21,198 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-06-01 00:35:21,198 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-06-01 00:35:21,199 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-06-01 00:35:21,199 [ scc.repo] DEBUG ## PRs found:
2024-06-01 00:35:21,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-06-01 00:35:21,489 [ scc.repo] DEBUG ## Branches found:
2024-06-01 00:35:21,489 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:35:21,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:35:21,493 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-01 00:35:21,497 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-01 00:35:21,497 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-01 00:35:21,502 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-01 00:35:21,507 [ scc.git] DEBUG Already up to date.
2024-06-01 00:35:21,507 [ scc.git] DEBUG ## Unique users: []
2024-06-01 00:35:21,508 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:35:21,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:35:21,512 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-01 00:35:21,566 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:35:21,567 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:35:21,572 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-01 00:35:21,789 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7436039d90> has no local changes
2024-06-01 00:35:21,790 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Generated by OMERO-python-superbuild-push#79 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/79/)'
2024-06-01 00:35:21,818 [ scc.git] DEBUG [detached HEAD b780653] merge master -Dorg -Snone
2024-06-01 00:35:21,819 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-06-01 00:35:21,819 [ scc.merge] INFO Already up to date.
2024-06-01 00:35:21,819 [ scc.merge] INFO
2024-06-01 00:35:21,819 [ scc.merge] INFO
2024-06-01 00:35:21,819 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-06-01 00:35:21,819 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-06-01 00:35:24,353 [ scc.config] DEBUG Found github.token
2024-06-01 00:35:24,356 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-06-01 00:35:24,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:35:24,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:35:25,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-06-01 00:35:25,380 [ scc.gh] DEBUG 2852 remaining from 5000 (Reset at 00:06
2024-06-01 00:35:25,381 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-01 00:35:25,385 [ scc.git] DEBUG Check current status
2024-06-01 00:35:25,385 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-01 00:35:25,389 [ scc.git] DEBUG b780653 merge master -Dorg -Snone
2024-06-01 00:35:25,389 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-01 00:35:25,432 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-06-01 00:35:25,435 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-06-01 00:35:25,438 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421)
2024-06-01 00:35:25,442 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-06-01 00:35:25,446 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-06-01 00:35:25,450 [ scc.config] DEBUG Found remote.origin.url
2024-06-01 00:35:25,451 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-06-01 00:35:25,452 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-06-01 00:35:25,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-06-01 00:35:26,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-01 00:35:26,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-01 00:35:27,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-01 00:35:27,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-01 00:35:27,559 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-01 00:35:27,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-06-01 00:35:27,633 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-01 00:35:27,639 [ scc.git] DEBUG Check current status
2024-06-01 00:35:27,639 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-01 00:35:27,644 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-06-01 00:35:27,645 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-01 00:35:27,696 [ scc.config] DEBUG Found remote.origin.url
2024-06-01 00:35:28,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-06-01 00:35:28,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-01 00:35:28,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-01 00:35:29,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-01 00:35:29,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-01 00:35:29,760 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-01 00:35:29,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-01 00:35:29,807 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-06-01 00:35:29,807 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-01 00:35:29,812 [ scc.git] DEBUG Check current status
2024-06-01 00:35:29,812 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-01 00:35:29,818 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-06-01 00:35:29,818 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-01 00:35:29,872 [ scc.config] DEBUG Found remote.origin.url
2024-06-01 00:35:30,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-06-01 00:35:30,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-01 00:35:31,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-01 00:35:31,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-01 00:35:31,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-01 00:35:31,963 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-01 00:35:32,009 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-01 00:35:32,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-06-01 00:35:32,010 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-01 00:35:32,015 [ scc.git] DEBUG Check current status
2024-06-01 00:35:32,015 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-01 00:35:32,034 [ scc.git] DEBUG d3a65421 Merge pull request #410 from jburel/python_wheel
2024-06-01 00:35:32,034 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-01 00:35:32,088 [ scc.config] DEBUG Found remote.origin.url
2024-06-01 00:35:32,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-06-01 00:35:32,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-01 00:35:33,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-01 00:35:33,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-01 00:35:34,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-01 00:35:34,172 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-01 00:35:34,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-01 00:35:34,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-06-01 00:35:34,214 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-01 00:35:34,218 [ scc.git] DEBUG Check current status
2024-06-01 00:35:34,218 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-01 00:35:34,234 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-06-01 00:35:34,235 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-01 00:35:34,300 [ scc.config] DEBUG Found remote.origin.url
2024-06-01 00:35:34,301 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-06-01 00:35:34,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-06-01 00:35:35,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-01 00:35:35,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-01 00:35:35,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-01 00:35:36,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-01 00:35:36,379 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-01 00:35:36,425 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-01 00:35:36,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-06-01 00:35:36,426 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-01 00:35:36,432 [ scc.git] DEBUG Check current status
2024-06-01 00:35:36,432 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-01 00:35:36,460 [ scc.git] DEBUG 9c94fd493 Bump version: 5.26.0 → 5.26.1.dev0
2024-06-01 00:35:36,460 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-01 00:35:36,513 [ scc.config] DEBUG Found remote.origin.url
2024-06-01 00:35:36,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-06-01 00:35:37,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-01 00:35:37,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-01 00:35:38,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-01 00:35:38,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-01 00:35:38,555 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-01 00:35:38,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-01 00:35:38,598 [ scc.git] DEBUG Resetting...
2024-06-01 00:35:38,598 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-06-01 00:35:38,604 [ scc.git] DEBUG HEAD is now at b780653 merge master -Dorg -Snone
2024-06-01 00:35:38,605 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-06-01 00:35:38,663 [ scc.git] DEBUG Check current status
2024-06-01 00:35:38,663 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-01 00:35:38,667 [ scc.git] DEBUG b780653 merge master -Dorg -Snone
2024-06-01 00:35:38,667 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-01 00:35:38,709 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-06-01 00:35:38,712 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-06-01 00:35:38,715 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421)
2024-06-01 00:35:38,719 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-06-01 00:35:38,722 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-06-01 00:35:38,723 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-06-01 00:35:38,723 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-06-01 00:35:38,723 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-06-01 00:35:38,723 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-06-01 00:35:38,723 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-06-01 00:35:38,723 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-06-01 00:35:38,724 [ scc.repo] DEBUG ## PRs found:
2024-06-01 00:35:38,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-06-01 00:35:38,994 [ scc.repo] DEBUG ## Branches found:
2024-06-01 00:35:38,995 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:35:38,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:35:39,000 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-01 00:35:39,006 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-01 00:35:39,006 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-01 00:35:39,012 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-01 00:35:39,023 [ scc.git] DEBUG Already up to date.
2024-06-01 00:35:39,023 [ scc.git] DEBUG ## Unique users: []
2024-06-01 00:35:39,023 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:35:39,024 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:35:39,034 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-01 00:35:39,084 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:35:39,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:35:39,091 [ scc.repo] DEBUG ## PRs found:
2024-06-01 00:35:39,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-06-01 00:35:39,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-06-01 00:35:40,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-06-01 00:35:40,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-06-01 00:35:41,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-01 00:35:41,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-06-01 00:35:42,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-06-01 00:35:42,191 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-06-01 00:35:42,191 [ scc.repo] DEBUG ## Branches found:
2024-06-01 00:35:42,191 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-06-01 00:35:42,191 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:35:42,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:35:42,198 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-01 00:35:42,204 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-01 00:35:42,205 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-01 00:35:42,210 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-01 00:35:42,216 [ scc.git] DEBUG Already up to date.
2024-06-01 00:35:42,217 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-06-01 00:35:42,630 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-06-01 00:35:42,630 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-06-01 00:35:42,635 [ scc.git] DEBUG ## Unique users: []
2024-06-01 00:35:42,635 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:35:42,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:35:42,639 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-06-01 00:35:42,644 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:35:42,648 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-06-01 00:35:42,809 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-06-01 00:35:42,809 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-06-01 00:35:42,809 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-06-01 00:35:42,809 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-06-01 00:35:42,809 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-06-01 00:35:42,809 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-06-01 00:35:42,809 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-06-01 00:35:42,809 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-06-01 00:35:42,809 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-06-01 00:35:42,810 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-01 00:35:42,814 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-06-01 00:35:42,814 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-06-01 00:35:42,814 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-06-01 00:35:42,814 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-06-01 00:35:42,814 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-06-01 00:35:42,814 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-06-01 00:35:42,814 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-06-01 00:35:42,814 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-06-01 00:35:42,814 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-06-01 00:35:42,815 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-06-01 00:35:42,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:35:42,984 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-01 00:35:43,025 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:35:43,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:35:43,030 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-01 00:35:43,072 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-01 00:35:43,078 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f054875a460> has no local changes
2024-06-01 00:35:43,079 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#79 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/79/)'
2024-06-01 00:35:43,087 [ scc.git] DEBUG [detached HEAD da5e065] merge master -Dorg -Ssuccess-only
2024-06-01 00:35:43,088 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-01 00:35:43,088 [ scc.repo] DEBUG ## PRs found:
2024-06-01 00:35:43,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-06-01 00:35:43,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-06-01 00:35:44,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-06-01 00:35:44,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-06-01 00:35:45,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-01 00:35:45,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-01 00:35:46,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-06-01 00:35:46,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-06-01 00:35:46,664 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-06-01 00:35:47,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-06-01 00:35:47,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-06-01 00:35:48,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-06-01 00:35:48,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-06-01 00:35:48,519 [ scc.repo] DEBUG ## Branches found:
2024-06-01 00:35:48,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-06-01 00:35:48,519 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:35:48,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:35:48,524 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-01 00:35:48,528 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-01 00:35:48,528 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-01 00:35:48,533 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-01 00:35:48,540 [ scc.git] DEBUG Already up to date.
2024-06-01 00:35:48,540 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-06-01 00:35:48,987 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-06-01 00:35:48,988 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-06-01 00:35:48,992 [ scc.git] DEBUG ## Unique users: []
2024-06-01 00:35:48,992 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:35:48,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:35:48,998 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-06-01 00:35:49,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:35:49,009 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-06-01 00:35:49,035 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-06-01 00:35:49,036 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-01 00:35:49,039 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-06-01 00:35:49,039 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-06-01 00:35:49,039 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-06-01 00:35:49,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:35:49,201 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-01 00:35:49,244 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:35:49,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:35:49,250 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-01 00:35:49,292 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-01 00:35:49,300 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0547679c40> has no local changes
2024-06-01 00:35:49,301 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#79 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/79/)'
2024-06-01 00:35:49,311 [ scc.git] DEBUG [detached HEAD 3a73310] merge master -Dorg -Ssuccess-only
2024-06-01 00:35:49,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-01 00:35:49,312 [ scc.repo] DEBUG ## PRs found:
2024-06-01 00:35:49,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-06-01 00:35:50,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-06-01 00:35:50,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-06-01 00:35:51,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-06-01 00:35:51,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-01 00:35:52,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-01 00:35:52,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-06-01 00:35:53,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-06-01 00:35:53,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-06-01 00:35:53,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-06-01 00:35:54,000 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-06-01 00:35:54,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-06-01 00:35:54,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-06-01 00:35:55,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-06-01 00:35:55,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-01 00:35:56,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-01 00:35:56,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-06-01 00:35:57,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-06-01 00:35:57,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-01 00:35:58,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-01 00:35:58,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-06-01 00:35:58,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-06-01 00:35:59,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-06-01 00:35:59,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-06-01 00:35:59,855 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-06-01 00:36:00,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-06-01 00:36:00,307 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-06-01 00:36:00,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378 HTTP/1.1" 200 None
2024-06-01 00:36:01,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378/comments HTTP/1.1" 200 None
2024-06-01 00:36:01,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-06-01 00:36:02,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-06-01 00:36:02,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-06-01 00:36:03,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-01 00:36:03,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-06-01 00:36:03,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-06-01 00:36:03,966 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-06-01 00:36:04,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-06-01 00:36:04,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-06-01 00:36:05,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-06-01 00:36:05,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-01 00:36:06,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-01 00:36:06,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-06-01 00:36:07,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-06-01 00:36:07,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-06-01 00:36:08,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-06-01 00:36:08,070 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-06-01 00:36:08,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-06-01 00:36:09,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-06-01 00:36:09,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-06-01 00:36:09,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-06-01 00:36:10,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-06-01 00:36:10,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-01 00:36:11,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-06-01 00:36:11,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-06-01 00:36:11,809 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-06-01 00:36:12,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-06-01 00:36:12,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-06-01 00:36:13,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-01 00:36:13,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-06-01 00:36:14,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-06-01 00:36:14,084 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-06-01 00:36:14,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-06-01 00:36:15,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-06-01 00:36:15,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-06-01 00:36:16,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-01 00:36:16,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-06-01 00:36:16,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-06-01 00:36:16,872 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-06-01 00:36:17,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-06-01 00:36:17,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-06-01 00:36:18,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-06-01 00:36:18,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-01 00:36:19,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-06-01 00:36:19,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-06-01 00:36:19,597 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-06-01 00:36:20,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-06-01 00:36:20,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-06-01 00:36:20,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-06-01 00:36:21,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-06-01 00:36:21,493 [ scc.repo] DEBUG ## Branches found:
2024-06-01 00:36:21,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-06-01 00:36:21,493 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:36:21,493 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:21,498 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-01 00:36:21,501 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-01 00:36:21,501 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-01 00:36:21,506 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-01 00:36:21,510 [ scc.git] DEBUG Already up to date.
2024-06-01 00:36:21,510 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-06-01 00:36:22,300 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-01 00:36:22,300 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-06-01 00:36:22,306 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-06-01 00:36:22,792 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-01 00:36:22,792 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-06-01 00:36:22,797 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-06-01 00:36:23,296 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-01 00:36:23,297 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-06-01 00:36:23,302 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-06-01 00:36:23,754 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-01 00:36:23,754 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-06-01 00:36:23,759 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-06-01 00:36:24,294 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-01 00:36:24,294 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-06-01 00:36:24,299 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-06-01 00:36:24,659 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-01 00:36:24,659 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-06-01 00:36:24,664 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-06-01 00:36:25,054 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-01 00:36:25,054 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-06-01 00:36:25,059 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-06-01 00:36:25,564 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-01 00:36:25,564 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-06-01 00:36:25,569 [ scc.git] DEBUG ## Unique users: []
2024-06-01 00:36:25,569 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:36:25,569 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:25,574 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-06-01 00:36:25,585 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:25,592 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-06-01 00:36:25,680 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-06-01 00:36:25,680 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-06-01 00:36:25,681 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-01 00:36:25,686 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-06-01 00:36:25,686 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-06-01 00:36:25,686 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-06-01 00:36:25,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:36:25,840 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-06-01 00:36:25,852 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:25,858 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-06-01 00:36:26,064 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-06-01 00:36:26,065 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-06-01 00:36:26,065 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-01 00:36:26,073 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-06-01 00:36:26,073 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-06-01 00:36:26,073 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-06-01 00:36:26,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:36:26,240 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-06-01 00:36:26,251 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:26,256 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-06-01 00:36:26,350 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-06-01 00:36:26,351 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-01 00:36:26,354 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-06-01 00:36:26,354 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-06-01 00:36:26,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:36:26,666 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-06-01 00:36:26,684 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:26,703 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-06-01 00:36:26,826 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-06-01 00:36:26,827 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-06-01 00:36:26,828 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-01 00:36:26,832 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-06-01 00:36:26,832 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-06-01 00:36:26,832 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-06-01 00:36:27,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:36:27,085 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-06-01 00:36:27,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:27,100 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-06-01 00:36:27,161 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-01 00:36:27,165 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-06-01 00:36:27,165 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-06-01 00:36:27,165 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-06-01 00:36:27,165 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-06-01 00:36:27,165 [ scc.git] DEBUG create mode 100644 connect.py
2024-06-01 00:36:27,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:36:27,507 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-06-01 00:36:27,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:27,531 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-06-01 00:36:27,613 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-06-01 00:36:27,614 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-01 00:36:27,618 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-06-01 00:36:27,618 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-06-01 00:36:27,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:36:27,907 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-06-01 00:36:27,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:27,930 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-06-01 00:36:28,013 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-06-01 00:36:28,014 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-01 00:36:28,018 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-06-01 00:36:28,018 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-06-01 00:36:28,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:36:28,313 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-06-01 00:36:28,324 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:28,329 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-06-01 00:36:28,401 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-06-01 00:36:28,402 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-01 00:36:28,409 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-06-01 00:36:28,409 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-06-01 00:36:28,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:36:28,728 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-01 00:36:28,771 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:36:28,771 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:28,776 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-01 00:36:28,819 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-01 00:36:28,829 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f054875a430> has no local changes
2024-06-01 00:36:28,830 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
Generated by OMERO-python-superbuild-push#79 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/79/)'
2024-06-01 00:36:28,842 [ scc.git] DEBUG [detached HEAD 689082ee] merge master -Dorg -Ssuccess-only
2024-06-01 00:36:28,843 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-01 00:36:28,843 [ scc.git] INFO Overriding base-branch from master to develop
2024-06-01 00:36:28,843 [ scc.repo] DEBUG ## PRs found:
2024-06-01 00:36:29,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-06-01 00:36:29,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-06-01 00:36:30,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-06-01 00:36:30,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-06-01 00:36:31,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-06-01 00:36:31,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-06-01 00:36:32,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-06-01 00:36:32,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-06-01 00:36:33,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-01 00:36:33,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-06-01 00:36:33,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-06-01 00:36:33,911 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-06-01 00:36:34,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-06-01 00:36:34,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-06-01 00:36:35,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-06-01 00:36:35,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-06-01 00:36:35,896 [ scc.repo] DEBUG ## Branches found:
2024-06-01 00:36:35,896 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-06-01 00:36:35,896 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:36:35,896 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:35,902 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-06-01 00:36:35,907 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-01 00:36:35,907 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-06-01 00:36:35,912 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-06-01 00:36:35,918 [ scc.git] DEBUG Already up to date.
2024-06-01 00:36:35,918 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-06-01 00:36:36,373 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-06-01 00:36:36,374 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-06-01 00:36:36,379 [ scc.git] DEBUG ## Unique users: []
2024-06-01 00:36:36,379 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:36:36,380 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:36,385 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-01 00:36:36,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:36,397 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-01 00:36:36,418 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-06-01 00:36:36,418 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-06-01 00:36:36,418 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-01 00:36:36,419 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-01 00:36:36,424 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a'
2024-06-01 00:36:36,430 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-06-01 00:36:36,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:36:36,582 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-01 00:36:36,589 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a'
2024-06-01 00:36:36,595 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#79](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/79/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/79/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-06-01 00:36:36,599 [ scc.config] DEBUG Found github.token
2024-06-01 00:36:36,600 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-06-01 00:36:36,600 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-01 00:36:36,647 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:36:36,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:36,654 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-01 00:36:36,697 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-01 00:36:36,704 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0547655640> has no local changes
2024-06-01 00:36:36,705 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#79 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/79/)'
2024-06-01 00:36:36,715 [ scc.git] DEBUG [detached HEAD cd88fbf] merge master -Dorg -Ssuccess-only
2024-06-01 00:36:36,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-01 00:36:36,716 [ scc.repo] DEBUG ## PRs found:
2024-06-01 00:36:37,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-06-01 00:36:37,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/558 HTTP/1.1" 200 None
2024-06-01 00:36:38,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None
2024-06-01 00:36:38,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-01 00:36:38,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-01 00:36:39,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None
2024-06-01 00:36:39,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/575f7bbc72aad997963937297f08156ca6f7dd5e?per_page=1 HTTP/1.1" 200 None
2024-06-01 00:36:40,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None
2024-06-01 00:36:40,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/status HTTP/1.1" 200 None
2024-06-01 00:36:40,727 [ scc.repo] DEBUG - PR 558 jburel 'Update readme'
2024-06-01 00:36:41,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555 HTTP/1.1" 200 None
2024-06-01 00:36:41,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555/comments HTTP/1.1" 200 None
2024-06-01 00:36:42,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f HTTP/1.1" 200 None
2024-06-01 00:36:42,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-01 00:36:43,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-01 00:36:43,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f HTTP/1.1" 200 None
2024-06-01 00:36:43,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/59392ac61e24b2ee642c3cdcae6d3f8dd514394f?per_page=1 HTTP/1.1" 200 None
2024-06-01 00:36:44,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f HTTP/1.1" 200 None
2024-06-01 00:36:44,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f/status HTTP/1.1" 200 None
2024-06-01 00:36:44,844 [ scc.repo] DEBUG - PR 555 chris-allan 'Archive status'
2024-06-01 00:36:45,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554 HTTP/1.1" 200 None
2024-06-01 00:36:45,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-06-01 00:36:46,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-06-01 00:36:46,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-06-01 00:36:47,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-06-01 00:36:47,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-01 00:36:48,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-01 00:36:48,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-06-01 00:36:49,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-06-01 00:36:49,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-06-01 00:36:49,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-06-01 00:36:49,914 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-06-01 00:36:50,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-06-01 00:36:50,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-06-01 00:36:51,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-06-01 00:36:51,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-01 00:36:52,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-01 00:36:52,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-06-01 00:36:53,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-06-01 00:36:53,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-06-01 00:36:54,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-06-01 00:36:54,044 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-06-01 00:36:54,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-06-01 00:36:54,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-06-01 00:36:55,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-06-01 00:36:55,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-01 00:36:56,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-01 00:36:56,397 [ scc.repo] DEBUG ## Branches found:
2024-06-01 00:36:56,397 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-06-01 00:36:56,397 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:36:56,397 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:56,402 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-01 00:36:56,407 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-01 00:36:56,407 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-01 00:36:56,413 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-01 00:36:56,420 [ scc.git] DEBUG Already up to date.
2024-06-01 00:36:56,420 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-06-01 00:36:57,215 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-06-01 00:36:57,216 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-06-01 00:36:57,220 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-06-01 00:36:57,718 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-06-01 00:36:57,718 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-06-01 00:36:57,723 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head'
2024-06-01 00:36:58,672 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-06-01 00:36:58,672 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD
2024-06-01 00:36:58,677 [ scc.git] DEBUG Calling 'git fetch origin pull/558/head'
2024-06-01 00:36:59,187 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-06-01 00:36:59,188 [ scc.git] DEBUG * branch refs/pull/558/head -> FETCH_HEAD
2024-06-01 00:36:59,192 [ scc.git] DEBUG ## Unique users: []
2024-06-01 00:36:59,192 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:36:59,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:59,197 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-06-01 00:36:59,203 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:59,208 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-06-01 00:36:59,305 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-06-01 00:36:59,305 [ scc.git] DEBUG Auto-merging setup.py
2024-06-01 00:36:59,307 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-01 00:36:59,311 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-06-01 00:36:59,311 [ scc.git] DEBUG setup.py | 1 +
2024-06-01 00:36:59,313 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-06-01 00:36:59,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:36:59,465 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-06-01 00:36:59,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:59,476 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-06-01 00:36:59,565 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-06-01 00:36:59,566 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-06-01 00:36:59,566 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-01 00:36:59,570 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-06-01 00:36:59,571 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-06-01 00:36:59,571 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-06-01 00:36:59,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:36:59,879 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59392ac61e24b2ee642c3cdcae6d3f8dd514394f'
2024-06-01 00:36:59,887 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:36:59,891 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Archive status) 59392ac61e24b2ee642c3cdcae6d3f8dd514394f'
2024-06-01 00:36:59,967 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-06-01 00:36:59,977 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-01 00:36:59,982 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.tree.js | 3 +++
2024-06-01 00:36:59,983 [ scc.git] DEBUG .../templates/webclient/annotations/includes/core_metadata.html | 6 ++++++
2024-06-01 00:36:59,983 [ scc.git] DEBUG omeroweb/webclient/tree.py | 7 +++++--
2024-06-01 00:36:59,983 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 1 +
2024-06-01 00:36:59,983 [ scc.git] DEBUG 4 files changed, 15 insertions(+), 2 deletions(-)
2024-06-01 00:37:00,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:37:00,288 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...575f7bbc72aad997963937297f08156ca6f7dd5e'
2024-06-01 00:37:00,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:37:00,300 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 558 (Update readme) 575f7bbc72aad997963937297f08156ca6f7dd5e'
2024-06-01 00:37:00,319 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-01 00:37:00,322 [ scc.git] DEBUG README.rst | 42 +++++++++++++++++++++---------------------
2024-06-01 00:37:00,322 [ scc.git] DEBUG 1 file changed, 21 insertions(+), 21 deletions(-)
2024-06-01 00:37:00,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:37:00,696 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-01 00:37:00,736 [ scc.git] DEBUG Get sha1 of %s
2024-06-01 00:37:00,737 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-01 00:37:00,741 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-01 00:37:00,780 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-01 00:37:00,937 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f05445de3d0> has no local changes
2024-06-01 00:37:00,937 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 555 chris-allan 'Archive status'
- PR 558 jburel 'Update readme'
Generated by OMERO-python-superbuild-push#79 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/79/)'
2024-06-01 00:37:01,014 [ scc.git] DEBUG [detached HEAD ade055c3e] merge master -Dorg -Ssuccess-only
2024-06-01 00:37:01,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-01 00:37:01,014 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-01 00:37:01,085 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-06-01 00:37:01,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:37:01,248 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-06-01 00:37:01,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:37:01,682 [ scc.config] DEBUG Found submodule.omero-py.url
2024-06-01 00:37:02,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:37:02,092 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-06-01 00:37:02,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:37:02,497 [ scc.config] DEBUG Found submodule.omero-web.url
2024-06-01 00:37:02,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-01 00:37:02,900 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-01 00:37:02,927 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f054874ed90> has local changes
2024-06-01 00:37:02,928 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 555 chris-allan 'Archive status'
- PR 558 jburel 'Update readme'
Generated by OMERO-python-superbuild-push#79 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/79/)'
2024-06-01 00:37:02,938 [ scc.git] DEBUG [detached HEAD 99eee89] merge master -Dorg -Ssuccess-only
2024-06-01 00:37:02,939 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-06-01 00:37:02,939 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-06-01 00:37:02,939 [ scc.merge] INFO Already up to date.
2024-06-01 00:37:02,939 [ scc.merge] INFO
2024-06-01 00:37:02,939 [ scc.merge] INFO
2024-06-01 00:37:02,939 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-06-01 00:37:02,939 [ scc.merge] INFO Already up to date.
2024-06-01 00:37:02,939 [ scc.merge] INFO
2024-06-01 00:37:02,939 [ scc.merge] INFO Merged PRs:
2024-06-01 00:37:02,939 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-06-01 00:37:02,939 [ scc.merge] INFO
2024-06-01 00:37:02,939 [ scc.merge] INFO Repository: ome/omero-marshal
2024-06-01 00:37:02,939 [ scc.merge] INFO Excluded PRs:
2024-06-01 00:37:02,939 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-06-01 00:37:02,940 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-06-01 00:37:02,940 [ scc.merge] INFO Already up to date.
2024-06-01 00:37:02,940 [ scc.merge] INFO
2024-06-01 00:37:02,940 [ scc.merge] INFO Merged PRs:
2024-06-01 00:37:02,940 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-06-01 00:37:02,940 [ scc.merge] INFO
2024-06-01 00:37:02,940 [ scc.merge] INFO Repository: ome/omero-py
2024-06-01 00:37:02,940 [ scc.merge] INFO Excluded PRs:
2024-06-01 00:37:02,940 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-06-01 00:37:02,940 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-06-01 00:37:02,940 [ scc.merge] INFO - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
2024-06-01 00:37:02,940 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-06-01 00:37:02,940 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-06-01 00:37:02,940 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-06-01 00:37:02,940 [ scc.merge] INFO Already up to date.
2024-06-01 00:37:02,940 [ scc.merge] INFO
2024-06-01 00:37:02,940 [ scc.merge] INFO Merged PRs:
2024-06-01 00:37:02,940 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-06-01 00:37:02,940 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-06-01 00:37:02,940 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-06-01 00:37:02,940 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-06-01 00:37:02,940 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-06-01 00:37:02,940 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-06-01 00:37:02,940 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-06-01 00:37:02,941 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-06-01 00:37:02,941 [ scc.merge] INFO
2024-06-01 00:37:02,941 [ scc.merge] INFO Repository: ome/omero-scripts
2024-06-01 00:37:02,941 [ scc.merge] INFO Excluded PRs:
2024-06-01 00:37:02,941 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-06-01 00:37:02,941 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-06-01 00:37:02,941 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-06-01 00:37:02,941 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-06-01 00:37:02,941 [ scc.merge] INFO Already up to date.
2024-06-01 00:37:02,941 [ scc.merge] INFO
2024-06-01 00:37:02,941 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-01 00:37:02,941 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-06-01 00:37:02,941 [ scc.merge] INFO
2024-06-01 00:37:02,941 [ scc.merge] INFO Repository: ome/omero-web
2024-06-01 00:37:02,941 [ scc.merge] INFO Excluded PRs:
2024-06-01 00:37:02,941 [ scc.merge] INFO - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
2024-06-01 00:37:02,941 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-06-01 00:37:02,941 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-06-01 00:37:02,941 [ scc.merge] INFO Already up to date.
2024-06-01 00:37:02,941 [ scc.merge] INFO
2024-06-01 00:37:02,941 [ scc.merge] INFO Merged PRs:
2024-06-01 00:37:02,941 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-06-01 00:37:02,941 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-06-01 00:37:02,942 [ scc.merge] INFO - PR 555 chris-allan 'Archive status'
2024-06-01 00:37:02,942 [ scc.merge] INFO - PR 558 jburel 'Update readme'
2024-06-01 00:37:02,942 [ scc.merge] INFO
2024-06-01 00:37:02,942 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-06-01 00:37:02,942 [ scc.git] DEBUG Calling 'git remote'
2024-06-01 00:37:02,947 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-06-01 00:37:02,947 [ scc.git] DEBUG Calling 'git remote'
2024-06-01 00:37:02,951 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-01 00:37:02,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-06-01 00:37:02,952 [ scc.git] DEBUG Calling 'git remote'
2024-06-01 00:37:02,956 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-01 00:37:02,956 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-06-01 00:37:02,956 [ scc.git] DEBUG Calling 'git remote'
2024-06-01 00:37:02,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-01 00:37:02,961 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-06-01 00:37:02,961 [ scc.git] DEBUG Calling 'git remote'
2024-06-01 00:37:02,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-01 00:37:02,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-06-01 00:37:02,966 [ scc.git] DEBUG Calling 'git remote'
2024-06-01 00:37:02,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from d3a65421
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 5a90893
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 9c94fd493
nothing to commit, working tree clean
HEAD detached from 05f561e
nothing to commit, working tree clean
2024-06-01 00:37:32,093 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
![[Jenkins]](/jenkins/static/f5fa13f0/images/svgs/logo.svg){kind=logo}
