Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-06-04 00:31:51,404 [ scc.config] DEBUG Found github.token
2024-06-04 00:31:51,406 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-06-04 00:31:51,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:31:52,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:31:52,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-06-04 00:31:52,440 [ scc.gh] DEBUG 3040 remaining from 5000 (Reset at 00:06
2024-06-04 00:31:52,440 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-04 00:31:52,444 [ scc.git] DEBUG Check current status
2024-06-04 00:31:52,444 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-04 00:31:52,447 [ scc.git] DEBUG 05f561e Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542
2024-06-04 00:31:52,448 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-04 00:31:52,487 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-06-04 00:31:52,490 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-06-04 00:31:52,569 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421)
2024-06-04 00:31:52,573 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-06-04 00:31:52,576 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-06-04 00:31:52,582 [ scc.config] DEBUG Found remote.origin.url
2024-06-04 00:31:52,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-06-04 00:31:53,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-04 00:31:53,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-04 00:31:54,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-04 00:31:54,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-04 00:31:54,681 [ scc.git] DEBUG Resetting...
2024-06-04 00:31:54,681 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-06-04 00:31:54,687 [ scc.git] DEBUG HEAD is now at 05f561e Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542
2024-06-04 00:31:54,687 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-06-04 00:31:54,746 [ scc.git] DEBUG Check current status
2024-06-04 00:31:54,746 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-04 00:31:54,750 [ scc.git] DEBUG 05f561e Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542
2024-06-04 00:31:54,750 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-04 00:31:54,791 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-06-04 00:31:54,793 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-06-04 00:31:54,797 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421)
2024-06-04 00:31:54,801 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-06-04 00:31:54,804 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-06-04 00:31:54,805 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-06-04 00:31:54,805 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-06-04 00:31:54,805 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-06-04 00:31:54,805 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-06-04 00:31:54,805 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-06-04 00:31:54,805 [ scc.repo] DEBUG ## PRs found:
2024-06-04 00:31:55,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-06-04 00:31:55,129 [ scc.repo] DEBUG ## Branches found:
2024-06-04 00:31:55,130 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:31:55,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:31:55,134 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-04 00:31:55,138 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-04 00:31:55,138 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-04 00:31:55,143 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-04 00:31:55,148 [ scc.git] DEBUG Already up to date.
2024-06-04 00:31:55,148 [ scc.git] DEBUG ## Unique users: []
2024-06-04 00:31:55,148 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:31:55,148 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:31:55,152 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-04 00:31:55,196 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:31:55,197 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:31:55,201 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-04 00:31:55,484 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f567b8e0850> has no local changes
2024-06-04 00:31:55,484 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Generated by OMERO-python-superbuild-push#80 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/80/)'
2024-06-04 00:31:55,513 [ scc.git] DEBUG [detached HEAD c10ce52] merge master -Dorg -Snone
2024-06-04 00:31:55,514 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-06-04 00:31:55,514 [ scc.merge] INFO Already up to date.
2024-06-04 00:31:55,514 [ scc.merge] INFO
2024-06-04 00:31:55,514 [ scc.merge] INFO
2024-06-04 00:31:55,514 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-06-04 00:31:55,514 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-06-04 00:31:57,975 [ scc.config] DEBUG Found github.token
2024-06-04 00:31:57,978 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-06-04 00:31:58,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:31:58,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:31:58,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-06-04 00:31:58,991 [ scc.gh] DEBUG 3019 remaining from 5000 (Reset at 00:06
2024-06-04 00:31:58,992 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-04 00:31:58,996 [ scc.git] DEBUG Check current status
2024-06-04 00:31:58,996 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-04 00:31:58,999 [ scc.git] DEBUG c10ce52 merge master -Dorg -Snone
2024-06-04 00:31:59,000 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-04 00:31:59,039 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-06-04 00:31:59,042 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-06-04 00:31:59,045 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421)
2024-06-04 00:31:59,049 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-06-04 00:31:59,052 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-06-04 00:31:59,057 [ scc.config] DEBUG Found remote.origin.url
2024-06-04 00:31:59,057 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-06-04 00:31:59,059 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-06-04 00:31:59,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-06-04 00:31:59,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-04 00:32:00,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-04 00:32:00,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-04 00:32:01,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-04 00:32:01,195 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-04 00:32:01,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-06-04 00:32:01,244 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-04 00:32:01,248 [ scc.git] DEBUG Check current status
2024-06-04 00:32:01,248 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-04 00:32:01,253 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-06-04 00:32:01,253 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-04 00:32:01,299 [ scc.config] DEBUG Found remote.origin.url
2024-06-04 00:32:01,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-06-04 00:32:02,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-04 00:32:02,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-04 00:32:03,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-04 00:32:03,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-04 00:32:03,431 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-04 00:32:03,476 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-04 00:32:03,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-06-04 00:32:03,478 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-04 00:32:03,482 [ scc.git] DEBUG Check current status
2024-06-04 00:32:03,482 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-04 00:32:03,487 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-06-04 00:32:03,487 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-04 00:32:03,532 [ scc.config] DEBUG Found remote.origin.url
2024-06-04 00:32:03,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-06-04 00:32:04,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-04 00:32:04,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-04 00:32:05,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-04 00:32:05,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-04 00:32:05,634 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-04 00:32:05,689 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-04 00:32:05,690 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-06-04 00:32:05,690 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-04 00:32:05,695 [ scc.git] DEBUG Check current status
2024-06-04 00:32:05,695 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-04 00:32:05,712 [ scc.git] DEBUG d3a65421 Merge pull request #410 from jburel/python_wheel
2024-06-04 00:32:05,712 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-04 00:32:05,755 [ scc.config] DEBUG Found remote.origin.url
2024-06-04 00:32:06,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-06-04 00:32:06,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-04 00:32:07,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-04 00:32:07,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-04 00:32:07,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-04 00:32:07,948 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-04 00:32:07,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-04 00:32:07,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-06-04 00:32:07,991 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-04 00:32:07,995 [ scc.git] DEBUG Check current status
2024-06-04 00:32:07,996 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-04 00:32:08,001 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-06-04 00:32:08,001 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-04 00:32:08,047 [ scc.config] DEBUG Found remote.origin.url
2024-06-04 00:32:08,048 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-06-04 00:32:08,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-06-04 00:32:08,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-04 00:32:09,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-04 00:32:09,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-04 00:32:10,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-04 00:32:10,147 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-04 00:32:10,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-04 00:32:10,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-06-04 00:32:10,186 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-04 00:32:10,192 [ scc.git] DEBUG Check current status
2024-06-04 00:32:10,193 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-04 00:32:10,208 [ scc.git] DEBUG 9c94fd493 Bump version: 5.26.0 → 5.26.1.dev0
2024-06-04 00:32:10,208 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-04 00:32:10,250 [ scc.config] DEBUG Found remote.origin.url
2024-06-04 00:32:10,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-06-04 00:32:11,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-04 00:32:11,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-04 00:32:11,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-04 00:32:12,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-04 00:32:12,384 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-04 00:32:12,427 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-04 00:32:12,427 [ scc.git] DEBUG Resetting...
2024-06-04 00:32:12,427 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-06-04 00:32:12,433 [ scc.git] DEBUG HEAD is now at c10ce52 merge master -Dorg -Snone
2024-06-04 00:32:12,433 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-06-04 00:32:12,489 [ scc.git] DEBUG Check current status
2024-06-04 00:32:12,490 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-04 00:32:12,494 [ scc.git] DEBUG c10ce52 merge master -Dorg -Snone
2024-06-04 00:32:12,494 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-04 00:32:12,536 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-06-04 00:32:12,539 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-06-04 00:32:12,543 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421)
2024-06-04 00:32:12,546 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-06-04 00:32:12,550 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-06-04 00:32:12,551 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-06-04 00:32:12,551 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-06-04 00:32:12,551 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-06-04 00:32:12,551 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-06-04 00:32:12,551 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-06-04 00:32:12,551 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-06-04 00:32:12,551 [ scc.repo] DEBUG ## PRs found:
2024-06-04 00:32:12,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-06-04 00:32:12,806 [ scc.repo] DEBUG ## Branches found:
2024-06-04 00:32:12,806 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:32:12,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:32:12,811 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-04 00:32:12,815 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-04 00:32:12,815 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-04 00:32:12,820 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-04 00:32:12,824 [ scc.git] DEBUG Already up to date.
2024-06-04 00:32:12,824 [ scc.git] DEBUG ## Unique users: []
2024-06-04 00:32:12,824 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:32:12,824 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:32:12,829 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-04 00:32:12,872 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:32:12,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:32:12,877 [ scc.repo] DEBUG ## PRs found:
2024-06-04 00:32:13,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-06-04 00:32:13,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-06-04 00:32:14,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-06-04 00:32:14,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-06-04 00:32:15,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-04 00:32:15,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-06-04 00:32:16,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-06-04 00:32:16,097 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-06-04 00:32:16,098 [ scc.repo] DEBUG ## Branches found:
2024-06-04 00:32:16,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-06-04 00:32:16,098 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:32:16,098 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:32:16,102 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-04 00:32:16,106 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-04 00:32:16,106 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-04 00:32:16,110 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-04 00:32:16,114 [ scc.git] DEBUG Already up to date.
2024-06-04 00:32:16,115 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-06-04 00:32:16,510 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-06-04 00:32:16,511 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-06-04 00:32:16,516 [ scc.git] DEBUG ## Unique users: []
2024-06-04 00:32:16,516 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:32:16,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:32:16,520 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-06-04 00:32:16,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:32:16,528 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-06-04 00:32:16,633 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-06-04 00:32:16,633 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-06-04 00:32:16,633 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-06-04 00:32:16,633 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-06-04 00:32:16,633 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-06-04 00:32:16,634 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-06-04 00:32:16,634 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-06-04 00:32:16,634 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-06-04 00:32:16,634 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-06-04 00:32:16,634 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-04 00:32:16,638 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-06-04 00:32:16,639 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-06-04 00:32:16,639 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-06-04 00:32:16,639 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-06-04 00:32:16,639 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-06-04 00:32:16,639 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-06-04 00:32:16,639 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-06-04 00:32:16,641 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-06-04 00:32:16,641 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-06-04 00:32:16,641 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-06-04 00:32:16,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:32:16,805 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-04 00:32:16,849 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:32:16,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:32:16,854 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-04 00:32:16,895 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-04 00:32:16,901 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd5c61a8dc0> has no local changes
2024-06-04 00:32:16,901 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#80 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/80/)'
2024-06-04 00:32:16,910 [ scc.git] DEBUG [detached HEAD 52c0c24] merge master -Dorg -Ssuccess-only
2024-06-04 00:32:16,910 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-04 00:32:16,910 [ scc.repo] DEBUG ## PRs found:
2024-06-04 00:32:17,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-06-04 00:32:17,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-06-04 00:32:18,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-06-04 00:32:18,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-06-04 00:32:19,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-04 00:32:19,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-04 00:32:20,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-06-04 00:32:20,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-06-04 00:32:20,466 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-06-04 00:32:20,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-06-04 00:32:21,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-06-04 00:32:21,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-06-04 00:32:22,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-06-04 00:32:22,305 [ scc.repo] DEBUG ## Branches found:
2024-06-04 00:32:22,305 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-06-04 00:32:22,305 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:32:22,305 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:32:22,310 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-04 00:32:22,314 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-04 00:32:22,314 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-04 00:32:22,318 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-04 00:32:22,322 [ scc.git] DEBUG Already up to date.
2024-06-04 00:32:22,323 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-06-04 00:32:22,760 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-06-04 00:32:22,760 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-06-04 00:32:22,765 [ scc.git] DEBUG ## Unique users: []
2024-06-04 00:32:22,765 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:32:22,765 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:32:22,770 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-06-04 00:32:22,776 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:32:22,781 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-06-04 00:32:22,792 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-06-04 00:32:22,793 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-04 00:32:22,795 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-06-04 00:32:22,796 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-06-04 00:32:22,796 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-06-04 00:32:22,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:32:22,954 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-04 00:32:22,994 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:32:22,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:32:22,998 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-04 00:32:23,039 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-04 00:32:23,045 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd5c5152c40> has no local changes
2024-06-04 00:32:23,045 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#80 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/80/)'
2024-06-04 00:32:23,054 [ scc.git] DEBUG [detached HEAD 55a64ff] merge master -Dorg -Ssuccess-only
2024-06-04 00:32:23,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-04 00:32:23,054 [ scc.repo] DEBUG ## PRs found:
2024-06-04 00:32:23,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-06-04 00:32:24,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-06-04 00:32:24,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-06-04 00:32:24,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-06-04 00:32:25,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-04 00:32:25,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-04 00:32:26,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-06-04 00:32:26,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-06-04 00:32:27,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-06-04 00:32:27,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-06-04 00:32:27,670 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-06-04 00:32:28,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-06-04 00:32:28,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-06-04 00:32:29,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-06-04 00:32:29,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-04 00:32:30,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-04 00:32:30,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-06-04 00:32:30,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-06-04 00:32:31,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-04 00:32:31,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-04 00:32:32,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-06-04 00:32:32,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-06-04 00:32:33,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-06-04 00:32:33,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-06-04 00:32:33,622 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-06-04 00:32:34,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-06-04 00:32:34,086 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-06-04 00:32:34,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378 HTTP/1.1" 200 None
2024-06-04 00:32:35,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378/comments HTTP/1.1" 200 None
2024-06-04 00:32:35,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-06-04 00:32:35,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-06-04 00:32:36,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-06-04 00:32:36,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-04 00:32:37,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-06-04 00:32:37,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-06-04 00:32:37,736 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-06-04 00:32:38,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-06-04 00:32:38,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-06-04 00:32:39,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-06-04 00:32:39,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-04 00:32:40,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-04 00:32:40,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-06-04 00:32:40,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-06-04 00:32:41,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-06-04 00:32:41,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-06-04 00:32:41,847 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-06-04 00:32:42,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-06-04 00:32:42,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-06-04 00:32:43,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-06-04 00:32:43,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-06-04 00:32:44,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-06-04 00:32:44,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-04 00:32:45,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-06-04 00:32:45,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-06-04 00:32:45,548 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-06-04 00:32:46,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-06-04 00:32:46,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-06-04 00:32:46,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-04 00:32:47,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-06-04 00:32:47,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-06-04 00:32:47,936 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-06-04 00:32:48,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-06-04 00:32:48,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-06-04 00:32:49,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-06-04 00:32:49,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-04 00:32:50,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-06-04 00:32:50,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-06-04 00:32:50,978 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-06-04 00:32:51,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-06-04 00:32:51,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-06-04 00:32:52,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-06-04 00:32:52,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-04 00:32:53,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-06-04 00:32:53,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-06-04 00:32:53,676 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-06-04 00:32:54,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-06-04 00:32:54,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-06-04 00:32:55,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-06-04 00:32:55,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-06-04 00:32:55,606 [ scc.repo] DEBUG ## Branches found:
2024-06-04 00:32:55,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-06-04 00:32:55,606 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:32:55,606 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:32:55,611 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-04 00:32:55,615 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-04 00:32:55,616 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-04 00:32:55,621 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-04 00:32:55,627 [ scc.git] DEBUG Already up to date.
2024-06-04 00:32:55,627 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-06-04 00:32:56,203 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-04 00:32:56,203 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-06-04 00:32:56,209 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-06-04 00:32:56,620 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-04 00:32:56,620 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-06-04 00:32:56,626 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-06-04 00:32:57,027 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-04 00:32:57,027 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-06-04 00:32:57,034 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-06-04 00:32:57,462 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-04 00:32:57,462 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-06-04 00:32:57,468 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-06-04 00:32:57,904 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-04 00:32:57,904 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-06-04 00:32:57,909 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-06-04 00:32:58,284 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-04 00:32:58,284 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-06-04 00:32:58,290 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-06-04 00:32:58,710 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-04 00:32:58,711 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-06-04 00:32:58,716 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-06-04 00:32:59,174 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-04 00:32:59,174 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-06-04 00:32:59,180 [ scc.git] DEBUG ## Unique users: []
2024-06-04 00:32:59,180 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:32:59,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:32:59,186 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-06-04 00:32:59,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:32:59,204 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-06-04 00:32:59,231 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-06-04 00:32:59,231 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-06-04 00:32:59,233 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-04 00:32:59,237 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-06-04 00:32:59,237 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-06-04 00:32:59,238 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-06-04 00:32:59,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:32:59,399 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-06-04 00:32:59,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:32:59,417 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-06-04 00:32:59,456 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-06-04 00:32:59,456 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-06-04 00:32:59,457 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-04 00:32:59,464 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-06-04 00:32:59,465 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-06-04 00:32:59,465 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-06-04 00:32:59,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:32:59,816 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-06-04 00:32:59,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:32:59,834 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-06-04 00:32:59,901 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-06-04 00:32:59,902 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-04 00:32:59,905 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-06-04 00:32:59,906 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-06-04 00:33:00,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:33:00,250 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-06-04 00:33:00,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:33:00,267 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-06-04 00:33:00,396 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-06-04 00:33:00,397 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-06-04 00:33:00,398 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-04 00:33:00,402 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-06-04 00:33:00,402 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-06-04 00:33:00,402 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-06-04 00:33:00,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:33:00,665 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-06-04 00:33:00,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:33:00,682 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-06-04 00:33:00,722 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-04 00:33:00,725 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-06-04 00:33:00,725 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-06-04 00:33:00,725 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-06-04 00:33:00,725 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-06-04 00:33:00,725 [ scc.git] DEBUG create mode 100644 connect.py
2024-06-04 00:33:01,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:33:01,109 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-06-04 00:33:01,123 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:33:01,129 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-06-04 00:33:01,158 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-06-04 00:33:01,160 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-04 00:33:01,163 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-06-04 00:33:01,163 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-06-04 00:33:01,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:33:01,520 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-06-04 00:33:01,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:33:01,540 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-06-04 00:33:01,626 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-06-04 00:33:01,628 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-04 00:33:01,631 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-06-04 00:33:01,631 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-06-04 00:33:01,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:33:01,929 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-06-04 00:33:01,940 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:33:01,945 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-06-04 00:33:02,014 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-06-04 00:33:02,028 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-04 00:33:02,037 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-06-04 00:33:02,037 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-06-04 00:33:02,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:33:02,342 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-04 00:33:02,388 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:33:02,389 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:33:02,395 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-04 00:33:02,456 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-04 00:33:02,467 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd5c66cbbe0> has no local changes
2024-06-04 00:33:02,467 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
Generated by OMERO-python-superbuild-push#80 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/80/)'
2024-06-04 00:33:02,482 [ scc.git] DEBUG [detached HEAD 4d71535e] merge master -Dorg -Ssuccess-only
2024-06-04 00:33:02,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-04 00:33:02,483 [ scc.git] INFO Overriding base-branch from master to develop
2024-06-04 00:33:02,483 [ scc.repo] DEBUG ## PRs found:
2024-06-04 00:33:02,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-06-04 00:33:03,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-06-04 00:33:03,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-06-04 00:33:04,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-06-04 00:33:04,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-06-04 00:33:05,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-06-04 00:33:05,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-06-04 00:33:06,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-06-04 00:33:06,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-04 00:33:07,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-06-04 00:33:07,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-06-04 00:33:07,551 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-06-04 00:33:08,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-06-04 00:33:08,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-06-04 00:33:08,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-06-04 00:33:09,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-06-04 00:33:09,504 [ scc.repo] DEBUG ## Branches found:
2024-06-04 00:33:09,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-06-04 00:33:09,505 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:33:09,505 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:33:09,509 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-06-04 00:33:09,513 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-04 00:33:09,513 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-06-04 00:33:09,517 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-06-04 00:33:09,521 [ scc.git] DEBUG Already up to date.
2024-06-04 00:33:09,522 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-06-04 00:33:09,924 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-06-04 00:33:09,924 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-06-04 00:33:09,929 [ scc.git] DEBUG ## Unique users: []
2024-06-04 00:33:09,929 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:33:09,929 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:33:09,933 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-04 00:33:09,940 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:33:09,945 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-04 00:33:10,022 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-06-04 00:33:10,022 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-06-04 00:33:10,022 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-04 00:33:10,023 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-04 00:33:10,043 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a'
2024-06-04 00:33:10,055 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-06-04 00:33:10,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:33:10,222 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-04 00:33:10,229 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a'
2024-06-04 00:33:10,234 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#80](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/80/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/80/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-06-04 00:33:10,238 [ scc.config] DEBUG Found github.token
2024-06-04 00:33:10,238 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-06-04 00:33:10,238 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-04 00:33:10,274 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:33:10,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:33:10,279 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-04 00:33:10,317 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-04 00:33:10,324 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd5c512e640> has no local changes
2024-06-04 00:33:10,324 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#80 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/80/)'
2024-06-04 00:33:10,333 [ scc.git] DEBUG [detached HEAD 3285ed0] merge master -Dorg -Ssuccess-only
2024-06-04 00:33:10,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-04 00:33:10,333 [ scc.repo] DEBUG ## PRs found:
2024-06-04 00:33:10,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-06-04 00:33:11,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/558 HTTP/1.1" 200 None
2024-06-04 00:33:11,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None
2024-06-04 00:33:12,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-04 00:33:12,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-04 00:33:13,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None
2024-06-04 00:33:13,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/575f7bbc72aad997963937297f08156ca6f7dd5e?per_page=1 HTTP/1.1" 200 None
2024-06-04 00:33:13,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None
2024-06-04 00:33:14,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/status HTTP/1.1" 200 None
2024-06-04 00:33:14,432 [ scc.repo] DEBUG - PR 558 jburel 'Update readme'
2024-06-04 00:33:14,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555 HTTP/1.1" 200 None
2024-06-04 00:33:15,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555/comments HTTP/1.1" 200 None
2024-06-04 00:33:15,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f HTTP/1.1" 200 None
2024-06-04 00:33:16,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-04 00:33:16,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-04 00:33:17,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f HTTP/1.1" 200 None
2024-06-04 00:33:17,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/59392ac61e24b2ee642c3cdcae6d3f8dd514394f?per_page=1 HTTP/1.1" 200 None
2024-06-04 00:33:18,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f HTTP/1.1" 200 None
2024-06-04 00:33:18,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f/status HTTP/1.1" 200 None
2024-06-04 00:33:18,590 [ scc.repo] DEBUG - PR 555 chris-allan 'Archive status'
2024-06-04 00:33:19,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554 HTTP/1.1" 200 None
2024-06-04 00:33:19,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-06-04 00:33:20,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-06-04 00:33:20,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-06-04 00:33:20,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-06-04 00:33:21,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-04 00:33:21,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-04 00:33:22,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-06-04 00:33:22,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-06-04 00:33:23,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-06-04 00:33:23,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-06-04 00:33:23,645 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-06-04 00:33:24,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-06-04 00:33:24,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-06-04 00:33:25,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-06-04 00:33:25,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-04 00:33:26,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-04 00:33:26,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-06-04 00:33:26,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-06-04 00:33:27,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-06-04 00:33:27,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-06-04 00:33:27,797 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-06-04 00:33:28,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-06-04 00:33:28,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-06-04 00:33:29,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-06-04 00:33:29,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-04 00:33:30,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-04 00:33:30,162 [ scc.repo] DEBUG ## Branches found:
2024-06-04 00:33:30,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-06-04 00:33:30,162 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:33:30,162 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:33:30,167 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-04 00:33:30,172 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-04 00:33:30,172 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-04 00:33:30,177 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-04 00:33:30,183 [ scc.git] DEBUG Already up to date.
2024-06-04 00:33:30,183 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-06-04 00:33:30,748 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-06-04 00:33:30,748 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-06-04 00:33:30,753 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-06-04 00:33:31,162 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-06-04 00:33:31,162 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-06-04 00:33:31,168 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head'
2024-06-04 00:33:32,057 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-06-04 00:33:32,058 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD
2024-06-04 00:33:32,063 [ scc.git] DEBUG Calling 'git fetch origin pull/558/head'
2024-06-04 00:33:32,569 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-06-04 00:33:32,569 [ scc.git] DEBUG * branch refs/pull/558/head -> FETCH_HEAD
2024-06-04 00:33:32,575 [ scc.git] DEBUG ## Unique users: []
2024-06-04 00:33:32,575 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:33:32,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:33:32,581 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-06-04 00:33:32,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:33:32,592 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-06-04 00:33:32,655 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-06-04 00:33:32,655 [ scc.git] DEBUG Auto-merging setup.py
2024-06-04 00:33:32,659 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-04 00:33:32,663 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-06-04 00:33:32,663 [ scc.git] DEBUG setup.py | 1 +
2024-06-04 00:33:32,663 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-06-04 00:33:32,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:33:32,835 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-06-04 00:33:32,842 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:33:32,847 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-06-04 00:33:32,973 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-06-04 00:33:32,973 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-06-04 00:33:33,005 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-04 00:33:33,010 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-06-04 00:33:33,010 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-06-04 00:33:33,010 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-06-04 00:33:33,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:33:33,248 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59392ac61e24b2ee642c3cdcae6d3f8dd514394f'
2024-06-04 00:33:33,255 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:33:33,259 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Archive status) 59392ac61e24b2ee642c3cdcae6d3f8dd514394f'
2024-06-04 00:33:33,364 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-06-04 00:33:33,365 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-04 00:33:33,371 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.tree.js | 3 +++
2024-06-04 00:33:33,371 [ scc.git] DEBUG .../templates/webclient/annotations/includes/core_metadata.html | 6 ++++++
2024-06-04 00:33:33,371 [ scc.git] DEBUG omeroweb/webclient/tree.py | 7 +++++--
2024-06-04 00:33:33,371 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 1 +
2024-06-04 00:33:33,371 [ scc.git] DEBUG 4 files changed, 15 insertions(+), 2 deletions(-)
2024-06-04 00:33:33,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:33:33,658 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...575f7bbc72aad997963937297f08156ca6f7dd5e'
2024-06-04 00:33:33,664 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:33:33,668 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 558 (Update readme) 575f7bbc72aad997963937297f08156ca6f7dd5e'
2024-06-04 00:33:33,686 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-04 00:33:33,689 [ scc.git] DEBUG README.rst | 42 +++++++++++++++++++++---------------------
2024-06-04 00:33:33,689 [ scc.git] DEBUG 1 file changed, 21 insertions(+), 21 deletions(-)
2024-06-04 00:33:34,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:33:34,078 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-04 00:33:34,123 [ scc.git] DEBUG Get sha1 of %s
2024-06-04 00:33:34,123 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-04 00:33:34,128 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-04 00:33:34,167 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-04 00:33:34,177 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd5c40bb3d0> has no local changes
2024-06-04 00:33:34,177 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 555 chris-allan 'Archive status'
- PR 558 jburel 'Update readme'
Generated by OMERO-python-superbuild-push#80 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/80/)'
2024-06-04 00:33:34,187 [ scc.git] DEBUG [detached HEAD 5380b72e1] merge master -Dorg -Ssuccess-only
2024-06-04 00:33:34,188 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-04 00:33:34,188 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-04 00:33:34,242 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-06-04 00:33:34,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:33:34,516 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-06-04 00:33:34,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:33:34,935 [ scc.config] DEBUG Found submodule.omero-py.url
2024-06-04 00:33:35,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:33:35,341 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-06-04 00:33:35,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:33:35,753 [ scc.config] DEBUG Found submodule.omero-web.url
2024-06-04 00:33:36,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-04 00:33:36,157 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-04 00:33:36,188 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd5c6227850> has local changes
2024-06-04 00:33:36,189 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 555 chris-allan 'Archive status'
- PR 558 jburel 'Update readme'
Generated by OMERO-python-superbuild-push#80 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/80/)'
2024-06-04 00:33:36,199 [ scc.git] DEBUG [detached HEAD 7bff873] merge master -Dorg -Ssuccess-only
2024-06-04 00:33:36,200 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-06-04 00:33:36,200 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-06-04 00:33:36,200 [ scc.merge] INFO Already up to date.
2024-06-04 00:33:36,200 [ scc.merge] INFO
2024-06-04 00:33:36,200 [ scc.merge] INFO
2024-06-04 00:33:36,200 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-06-04 00:33:36,200 [ scc.merge] INFO Already up to date.
2024-06-04 00:33:36,200 [ scc.merge] INFO
2024-06-04 00:33:36,200 [ scc.merge] INFO Merged PRs:
2024-06-04 00:33:36,200 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-06-04 00:33:36,200 [ scc.merge] INFO
2024-06-04 00:33:36,200 [ scc.merge] INFO Repository: ome/omero-marshal
2024-06-04 00:33:36,200 [ scc.merge] INFO Excluded PRs:
2024-06-04 00:33:36,200 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-06-04 00:33:36,200 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-06-04 00:33:36,200 [ scc.merge] INFO Already up to date.
2024-06-04 00:33:36,201 [ scc.merge] INFO
2024-06-04 00:33:36,201 [ scc.merge] INFO Merged PRs:
2024-06-04 00:33:36,201 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-06-04 00:33:36,201 [ scc.merge] INFO
2024-06-04 00:33:36,201 [ scc.merge] INFO Repository: ome/omero-py
2024-06-04 00:33:36,201 [ scc.merge] INFO Excluded PRs:
2024-06-04 00:33:36,201 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-06-04 00:33:36,201 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-06-04 00:33:36,201 [ scc.merge] INFO - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
2024-06-04 00:33:36,201 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-06-04 00:33:36,201 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-06-04 00:33:36,201 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-06-04 00:33:36,201 [ scc.merge] INFO Already up to date.
2024-06-04 00:33:36,201 [ scc.merge] INFO
2024-06-04 00:33:36,201 [ scc.merge] INFO Merged PRs:
2024-06-04 00:33:36,201 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-06-04 00:33:36,201 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-06-04 00:33:36,201 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-06-04 00:33:36,201 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-06-04 00:33:36,201 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-06-04 00:33:36,201 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-06-04 00:33:36,201 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-06-04 00:33:36,202 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-06-04 00:33:36,202 [ scc.merge] INFO
2024-06-04 00:33:36,202 [ scc.merge] INFO Repository: ome/omero-scripts
2024-06-04 00:33:36,202 [ scc.merge] INFO Excluded PRs:
2024-06-04 00:33:36,202 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-06-04 00:33:36,202 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-06-04 00:33:36,202 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-06-04 00:33:36,202 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-06-04 00:33:36,202 [ scc.merge] INFO Already up to date.
2024-06-04 00:33:36,202 [ scc.merge] INFO
2024-06-04 00:33:36,202 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-04 00:33:36,202 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-06-04 00:33:36,202 [ scc.merge] INFO
2024-06-04 00:33:36,202 [ scc.merge] INFO Repository: ome/omero-web
2024-06-04 00:33:36,202 [ scc.merge] INFO Excluded PRs:
2024-06-04 00:33:36,202 [ scc.merge] INFO - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
2024-06-04 00:33:36,202 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-06-04 00:33:36,202 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-06-04 00:33:36,202 [ scc.merge] INFO Already up to date.
2024-06-04 00:33:36,202 [ scc.merge] INFO
2024-06-04 00:33:36,202 [ scc.merge] INFO Merged PRs:
2024-06-04 00:33:36,202 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-06-04 00:33:36,202 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-06-04 00:33:36,202 [ scc.merge] INFO - PR 555 chris-allan 'Archive status'
2024-06-04 00:33:36,202 [ scc.merge] INFO - PR 558 jburel 'Update readme'
2024-06-04 00:33:36,202 [ scc.merge] INFO
2024-06-04 00:33:36,203 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-06-04 00:33:36,203 [ scc.git] DEBUG Calling 'git remote'
2024-06-04 00:33:36,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-06-04 00:33:36,208 [ scc.git] DEBUG Calling 'git remote'
2024-06-04 00:33:36,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-04 00:33:36,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-06-04 00:33:36,212 [ scc.git] DEBUG Calling 'git remote'
2024-06-04 00:33:36,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-04 00:33:36,216 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-06-04 00:33:36,216 [ scc.git] DEBUG Calling 'git remote'
2024-06-04 00:33:36,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-04 00:33:36,220 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-06-04 00:33:36,220 [ scc.git] DEBUG Calling 'git remote'
2024-06-04 00:33:36,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-04 00:33:36,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-06-04 00:33:36,224 [ scc.git] DEBUG Calling 'git remote'
2024-06-04 00:33:36,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from d3a65421
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 5a90893
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 9c94fd493
nothing to commit, working tree clean
HEAD detached from 05f561e
nothing to commit, working tree clean
2024-06-04 00:34:06,306 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
![[Jenkins]](/jenkins/static/d0200910/images/svgs/logo.svg){kind=logo}
