Console Output

Started by upstream project "Trigger" build number 385
originally caused by:
 Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-guides-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
 > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf
The recommended git tool is: NONE
No credentials specified
 > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-guides-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
 > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
Commit message: "Merge pull request #17 from jburel/python3"
 > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-guides-push/.git # timeout=10
 > git config remote.origin.url https://github.com/ome/omero-guides.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-guides.git
 > git --version # timeout=10
 > git --version # 'git version 2.43.5'
 > git fetch --tags --force --progress -- https://github.com/ome/omero-guides.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 5a57d6af3cae6b16b1104bf499bb3f6992bd2e8a (refs/remotes/origin/master)
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 5a57d6af3cae6b16b1104bf499bb3f6992bd2e8a # timeout=10
Commit message: "Merge pull request #298 from ome/dependabot/submodules/scripts-c7a3c70"
 > git rev-list --no-walk 5a57d6af3cae6b16b1104bf499bb3f6992bd2e8a # timeout=10
Cleaning workspace
 > git rev-parse --verify HEAD # timeout=10
Resetting working tree
 > git reset --hard # timeout=10
 > git clean -fdx # timeout=10
 > git submodule foreach --recursive git reset --hard # timeout=10
 > git submodule foreach --recursive git clean -fdx # timeout=10
 > git remote # timeout=10
 > git submodule init # timeout=10
 > git submodule sync # timeout=10
 > git config --get remote.origin.url # timeout=10
 > git submodule init # timeout=10
 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
 > git config --get submodule.cellprofiler.url # timeout=10
 > git config -f .gitmodules --get submodule.cellprofiler.path # timeout=10
 > git config --get submodule.matlab.url # timeout=10
 > git config -f .gitmodules --get submodule.matlab.path # timeout=10
 > git config --get submodule.qupath.url # timeout=10
 > git config -f .gitmodules --get submodule.qupath.path # timeout=10
 > git config --get submodule.fiji.url # timeout=10
 > git config -f .gitmodules --get submodule.fiji.path # timeout=10
 > git config --get submodule.orbit.url # timeout=10
 > git config -f .gitmodules --get submodule.orbit.path # timeout=10
 > git config --get submodule.r.url # timeout=10
 > git config -f .gitmodules --get submodule.r.path # timeout=10
 > git config --get submodule.figure.url # timeout=10
 > git config -f .gitmodules --get submodule.figure.path # timeout=10
 > git config --get submodule.trackmate.url # timeout=10
 > git config -f .gitmodules --get submodule.trackmate.path # timeout=10
 > git config --get submodule.python.url # timeout=10
 > git config -f .gitmodules --get submodule.python.path # timeout=10
 > git config --get submodule.parade.url # timeout=10
 > git config -f .gitmodules --get submodule.parade.path # timeout=10
 > git config --get submodule.fpbioimage.url # timeout=10
 > git config -f .gitmodules --get submodule.fpbioimage.path # timeout=10
 > git config --get submodule.iviewer.url # timeout=10
 > git config -f .gitmodules --get submodule.iviewer.path # timeout=10
 > git config --get submodule.upload.url # timeout=10
 > git config -f .gitmodules --get submodule.upload.path # timeout=10
 > git config --get submodule.ilastik.url # timeout=10
 > git config -f .gitmodules --get submodule.ilastik.path # timeout=10
 > git config --get submodule.introduction.url # timeout=10
 > git config -f .gitmodules --get submodule.introduction.path # timeout=10
 > git config --get submodule.download.url # timeout=10
 > git config -f .gitmodules --get submodule.download.path # timeout=10
 > git config --get submodule.java.url # timeout=10
 > git config -f .gitmodules --get submodule.java.path # timeout=10
 > git config --get submodule.scripts.url # timeout=10
 > git config -f .gitmodules --get submodule.scripts.path # timeout=10
 > git config --get submodule.mde.url # timeout=10
 > git config -f .gitmodules --get submodule.mde.path # timeout=10
 > git submodule update --init --recursive cellprofiler # timeout=10
 > git submodule update --init --recursive matlab # timeout=10
 > git submodule update --init --recursive qupath # timeout=10
 > git submodule update --init --recursive fiji # timeout=10
 > git submodule update --init --recursive orbit # timeout=10
 > git submodule update --init --recursive r # timeout=10
 > git submodule update --init --recursive figure # timeout=10
 > git submodule update --init --recursive trackmate # timeout=10
 > git submodule update --init --recursive python # timeout=10
 > git submodule update --init --recursive parade # timeout=10
 > git submodule update --init --recursive fpbioimage # timeout=10
 > git submodule update --init --recursive iviewer # timeout=10
 > git submodule update --init --recursive upload # timeout=10
 > git submodule update --init --recursive ilastik # timeout=10
 > git submodule update --init --recursive introduction # timeout=10
 > git submodule update --init --recursive download # timeout=10
 > git submodule update --init --recursive java # timeout=10
 > git submodule update --init --recursive scripts # timeout=10
 > git submodule update --init --recursive mde # timeout=10
[Pipeline] pwd
[Pipeline] sh
+ mkdir -p build
+ echo build
[Pipeline] sh
+ pushd build
~/workspace/OMERO-guides-push/build ~/workspace/OMERO-guides-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-guides-push
+ python3 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-guides-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-guides-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ python3 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3)
Collecting pip
  Using cached pip-25.0.1-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
  Attempting uninstall: pip
    Found existing installation: pip 21.2.3
    Uninstalling pip-21.2.3:
      Successfully uninstalled pip-21.2.3
Successfully installed pip-25.0.1
+ python3 -m pip install scc
Collecting scc
  Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
  Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
  Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
  Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
  Using cached ruamel.yaml-0.18.10-py3-none-any.whl.metadata (23 kB)
Collecting ruamel.yaml.jinja2 (from scc)
  Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
  Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3<2 (from scc)
  Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
  Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
  Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
  Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB)
Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc)
  Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB)
Collecting Deprecated (from PyGithub>=1.54->scc)
  Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
  Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached cryptography-44.0.1-cp39-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB)
Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc)
  Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached idna-3.10-py3-none-any.whl.metadata (10 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached certifi-2025.1.31-py3-none-any.whl.metadata (2.5 kB)
Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc)
  Using cached wrapt-1.17.2-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB)
Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc)
  Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB)
Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached ruamel.yaml-0.18.10-py3-none-any.whl (117 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached requests-2.32.3-py3-none-any.whl (64 kB)
Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB)
Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB)
Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB)
Using cached certifi-2025.1.31-py3-none-any.whl (166 kB)
Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB)
Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (146 kB)
Using cached cryptography-44.0.1-cp39-abi3-manylinux_2_34_x86_64.whl (4.2 MB)
Using cached idna-3.10-py3-none-any.whl (70 kB)
Using cached wrapt-1.17.2-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB)
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.1.31 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.1 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.10 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-guides.git
+ BASE_REPO=omero-guides.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-guides-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-guides-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-guides-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-guides-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-02-27 01:00:47,033 [  scc.config] DEBUG Found github.token
2025-02-27 01:00:47,036 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-02-27 01:00:47,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-02-27 01:00:47,450 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-02-27 01:00:47,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-02-27 01:00:47,856 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-02-27 01:00:48,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-02-27 01:00:48,008 [      scc.gh] DEBUG 4396 remaining from 5000 (Reset at 01:02
2025-02-27 01:00:48,009 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-02-27 01:00:48,013 [     scc.git] DEBUG Check current status
2025-02-27 01:00:48,014 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-02-27 01:00:48,018 [     scc.git] DEBUG 5a57d6a Merge pull request #298 from ome/dependabot/submodules/scripts-c7a3c70
2025-02-27 01:00:48,018 [     scc.git] DEBUG Calling 'git submodule status'
2025-02-27 01:00:48,062 [     scc.git] DEBUG  248e8cbfb0372b3d3be2d82cfe9234dd2e25c140 cellprofiler (v0.4.0-32-g248e8cb)
2025-02-27 01:00:48,072 [     scc.git] DEBUG  4b1b912438f7415faf2d1f618d596968121bcfe8 download (4b1b912)
2025-02-27 01:00:48,077 [     scc.git] DEBUG  654d43b5ef64f56bd6a99c69a9c98cbb5c8f76a7 figure (v0.1.0-55-g654d43b)
2025-02-27 01:00:48,080 [     scc.git] DEBUG  218b05a197695f01d8fc3d2cc6d197981df701c9 fiji (v0.2.1-86-g218b05a)
2025-02-27 01:00:48,090 [     scc.git] DEBUG  8f4b1035592a83dacf55e5cb585fd6ebe775f7f4 fpbioimage (heads/master)
2025-02-27 01:00:48,093 [     scc.git] DEBUG  f7b4afbe7c171a2063a46916851a26a84b83c4e6 ilastik (v0.3.4-2-gf7b4afb)
2025-02-27 01:00:48,103 [     scc.git] DEBUG  d9033638b26778db35de1c77428190ac4cad1936 introduction (heads/master)
2025-02-27 01:00:48,112 [     scc.git] DEBUG  6ed80b33e8ddc97c930e3ea8ba00702f34e0a8ed iviewer (heads/master)
2025-02-27 01:00:48,115 [     scc.git] DEBUG  a4b6b55205d0588c48baa8177aa7608fd40b3f85 java (v0.1.1-17-ga4b6b55)
2025-02-27 01:00:48,118 [     scc.git] DEBUG  ecbd07c31df9b103937f4803aa35f104480365f2 matlab (v0.1.0-26-gecbd07c)
2025-02-27 01:00:48,128 [     scc.git] DEBUG  d43e17feb8400f35a51d20e050b8a87bcdbcd1eb mde (heads/master)
2025-02-27 01:00:48,137 [     scc.git] DEBUG  4ef1eaaf315bbb8ae56e9ea780971735dc406f46 orbit (heads/master)
2025-02-27 01:00:48,147 [     scc.git] DEBUG  0875cf1cbb43411bfd5849763da8fe7d2bdafdc0 parade (0875cf1)
2025-02-27 01:00:48,150 [     scc.git] DEBUG  b633fb39b1f0145f8897fcb4b6cbe22b083cdb43 python (v0.3.0-91-gb633fb3)
2025-02-27 01:00:48,161 [     scc.git] DEBUG  6db8b1ceb6e7a44eb6145b4976fb3e048b04ee4f qupath (heads/master)
2025-02-27 01:00:48,164 [     scc.git] DEBUG  a770a1048469668b66f5bde686d5b6d84d021e6d r (v0.1.0-24-ga770a10)
2025-02-27 01:00:48,174 [     scc.git] DEBUG  c7a3c703cee0d8b2db2dccff92f0d48975f55789 scripts (remotes/origin/HEAD)
2025-02-27 01:00:48,184 [     scc.git] DEBUG  ffe98a8835c0f1bf345cb9ec0cfd2ba4aa304bd1 trackmate (heads/master)
2025-02-27 01:00:48,187 [     scc.git] DEBUG  7c953a800e9efa6a8d90a8b62f1d44df4fac47dd upload (v0.1.0-96-g7c953a8)
2025-02-27 01:00:48,192 [  scc.config] DEBUG Found remote.origin.url
2025-02-27 01:00:48,260 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-02-27 01:00:48,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-guides HTTP/1.1" 200 None
2025-02-27 01:00:48,813 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-02-27 01:00:48,872 [urllib3.util] DEBUG Incremented Retry for (url='/orgs/ome'): GithubRetry(total=9, connect=None, read=None, redirect=None, status=None)
2025-02-27 01:00:48,872 [urllib3.conn] WARNI Retrying (GithubRetry(total=9, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fc77c459c10>: Failed to establish a new connection: [Errno -2] Name or service not known')': /orgs/ome
2025-02-27 01:00:48,872 [urllib3.conn] DEBUG Starting new HTTPS connection (2): api.github.com:443
2025-02-27 01:00:48,873 [urllib3.util] DEBUG Incremented Retry for (url='/orgs/ome'): GithubRetry(total=8, connect=None, read=None, redirect=None, status=None)
2025-02-27 01:00:48,873 [urllib3.conn] WARNI Retrying (GithubRetry(total=8, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fc77c459d90>: Failed to establish a new connection: [Errno -2] Name or service not known')': /orgs/ome
2025-02-27 01:00:48,873 [urllib3.conn] DEBUG Starting new HTTPS connection (3): api.github.com:443
2025-02-27 01:00:48,873 [urllib3.util] DEBUG Incremented Retry for (url='/orgs/ome'): GithubRetry(total=7, connect=None, read=None, redirect=None, status=None)
2025-02-27 01:00:48,873 [urllib3.conn] WARNI Retrying (GithubRetry(total=7, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fc77c459f40>: Failed to establish a new connection: [Errno -2] Name or service not known')': /orgs/ome
2025-02-27 01:00:48,874 [urllib3.conn] DEBUG Starting new HTTPS connection (4): api.github.com:443
2025-02-27 01:00:48,874 [urllib3.util] DEBUG Incremented Retry for (url='/orgs/ome'): GithubRetry(total=6, connect=None, read=None, redirect=None, status=None)
2025-02-27 01:00:48,874 [urllib3.conn] WARNI Retrying (GithubRetry(total=6, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fc77c461130>: Failed to establish a new connection: [Errno -2] Name or service not known')': /orgs/ome
2025-02-27 01:00:48,874 [urllib3.conn] DEBUG Starting new HTTPS connection (5): api.github.com:443
2025-02-27 01:00:48,874 [urllib3.util] DEBUG Incremented Retry for (url='/orgs/ome'): GithubRetry(total=5, connect=None, read=None, redirect=None, status=None)
2025-02-27 01:00:48,874 [urllib3.conn] WARNI Retrying (GithubRetry(total=5, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fc77c4612e0>: Failed to establish a new connection: [Errno -2] Name or service not known')': /orgs/ome
2025-02-27 01:00:48,875 [urllib3.conn] DEBUG Starting new HTTPS connection (6): api.github.com:443
2025-02-27 01:00:48,875 [urllib3.util] DEBUG Incremented Retry for (url='/orgs/ome'): GithubRetry(total=4, connect=None, read=None, redirect=None, status=None)
2025-02-27 01:00:48,875 [urllib3.conn] WARNI Retrying (GithubRetry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fc77c461490>: Failed to establish a new connection: [Errno -2] Name or service not known')': /orgs/ome
2025-02-27 01:00:48,875 [urllib3.conn] DEBUG Starting new HTTPS connection (7): api.github.com:443
2025-02-27 01:00:48,876 [urllib3.util] DEBUG Incremented Retry for (url='/orgs/ome'): GithubRetry(total=3, connect=None, read=None, redirect=None, status=None)
2025-02-27 01:00:48,876 [urllib3.conn] WARNI Retrying (GithubRetry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fc77c461640>: Failed to establish a new connection: [Errno -2] Name or service not known')': /orgs/ome
2025-02-27 01:00:48,876 [urllib3.conn] DEBUG Starting new HTTPS connection (8): api.github.com:443
2025-02-27 01:00:48,876 [urllib3.util] DEBUG Incremented Retry for (url='/orgs/ome'): GithubRetry(total=2, connect=None, read=None, redirect=None, status=None)
2025-02-27 01:00:48,876 [urllib3.conn] WARNI Retrying (GithubRetry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fc77c4617f0>: Failed to establish a new connection: [Errno -2] Name or service not known')': /orgs/ome
2025-02-27 01:00:48,876 [urllib3.conn] DEBUG Starting new HTTPS connection (9): api.github.com:443
2025-02-27 01:00:48,877 [urllib3.util] DEBUG Incremented Retry for (url='/orgs/ome'): GithubRetry(total=1, connect=None, read=None, redirect=None, status=None)
2025-02-27 01:00:48,877 [urllib3.conn] WARNI Retrying (GithubRetry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fc77c4619a0>: Failed to establish a new connection: [Errno -2] Name or service not known')': /orgs/ome
2025-02-27 01:00:48,877 [urllib3.conn] DEBUG Starting new HTTPS connection (10): api.github.com:443
2025-02-27 01:00:48,877 [urllib3.util] DEBUG Incremented Retry for (url='/orgs/ome'): GithubRetry(total=0, connect=None, read=None, redirect=None, status=None)
2025-02-27 01:00:48,877 [urllib3.conn] WARNI Retrying (GithubRetry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fc77c461b50>: Failed to establish a new connection: [Errno -2] Name or service not known')': /orgs/ome
2025-02-27 01:00:48,877 [urllib3.conn] DEBUG Starting new HTTPS connection (11): api.github.com:443
2025-02-27 01:00:48,878 [    scc.repo] ERROR Failed to find ome/omero-guides
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/urllib3/connection.py", line 174, in _new_conn
    conn = connection.create_connection(
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/urllib3/util/connection.py", line 72, in create_connection
    for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM):
  File "/usr/lib64/python3.9/socket.py", line 954, in getaddrinfo
    for res in _socket.getaddrinfo(host, port, family, type, proto, flags):
socket.gaierror: [Errno -2] Name or service not known

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/urllib3/connectionpool.py", line 716, in urlopen
    httplib_response = self._make_request(
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/urllib3/connectionpool.py", line 404, in _make_request
    self._validate_conn(conn)
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/urllib3/connectionpool.py", line 1061, in _validate_conn
    conn.connect()
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/urllib3/connection.py", line 363, in connect
    self.sock = conn = self._new_conn()
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/urllib3/connection.py", line 186, in _new_conn
    raise NewConnectionError(
urllib3.exceptions.NewConnectionError: <urllib3.connection.HTTPSConnection object at 0x7fc77c461d00>: Failed to establish a new connection: [Errno -2] Name or service not known

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/requests/adapters.py", line 667, in send
    resp = conn.urlopen(
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/urllib3/connectionpool.py", line 830, in urlopen
    return self.urlopen(
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/urllib3/connectionpool.py", line 830, in urlopen
    return self.urlopen(
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/urllib3/connectionpool.py", line 830, in urlopen
    return self.urlopen(
  [Previous line repeated 7 more times]
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/urllib3/connectionpool.py", line 802, in urlopen
    retries = retries.increment(
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/github/GithubRetry.py", line 205, in increment
    return super().increment(method, url, response, error, _pool, _stacktrace)
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/urllib3/util/retry.py", line 594, in increment
    raise MaxRetryError(_pool, url, error or ResponseError(cause))
urllib3.exceptions.MaxRetryError: HTTPSConnectionPool(host='api.github.com', port=443): Max retries exceeded with url: /orgs/ome (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fc77c461d00>: Failed to establish a new connection: [Errno -2] Name or service not known'))

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/scc/main.py", line 64, in entry_point
    main("scc", items=[
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/yaclifw/framework.py", line 188, in main
    ns.func(ns)
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/scc/git.py", line 3329, in __call__
    self.init_main_repo(args)
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/scc/git.py", line 2179, in init_main_repo
    self.main_repo = self.gh.git_repo(
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/scc/git.py", line 386, in git_repo
    return GitRepository(self, os.path.abspath(path), *args, **kwargs)
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/scc/git.py", line 1104, in __init__
    self.origin = gh.gh_repo(repo_name, user_name)
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/scc/git.py", line 379, in gh_repo
    return GitHubRepository(self, username, reponame)
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/scc/git.py", line 774, in __init__
    self.org = gh.get_organization(self.repo.organization.login)
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/scc/git.py", line 126, in wrapper
    error = check_exception_message(e)
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/scc/git.py", line 115, in wrapper
    return func(*args, **kwargs)
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/scc/git.py", line 301, in get_organization
    return self.github.get_organization(*args)
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/github/MainClass.py", line 434, in get_organization
    headers, data = self.__requester.requestJsonAndCheck("GET", f"/orgs/{org}")
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/github/Requester.py", line 625, in requestJsonAndCheck
    *self.requestJson(
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/github/Requester.py", line 959, in requestJson
    status, responseHeaders, output = self.__requestEncode(
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/github/Requester.py", line 1098, in __requestEncode
    status, responseHeaders, output = self.__requestRaw(
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/github/Requester.py", line 1136, in __requestRaw
    response = cnx.getresponse()
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/github/Requester.py", line 214, in getresponse
    r = verb(
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/requests/sessions.py", line 602, in get
    return self.request("GET", url, **kwargs)
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/requests/sessions.py", line 589, in request
    resp = self.send(prep, **send_kwargs)
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/requests/sessions.py", line 703, in send
    r = adapter.send(request, **kwargs)
  File "/home/omero/workspace/OMERO-guides-push/build/venv/lib64/python3.9/site-packages/requests/adapters.py", line 700, in send
    raise ConnectionError(e, request=request)
requests.exceptions.ConnectionError: HTTPSConnectionPool(host='api.github.com', port=443): Max retries exceeded with url: /orgs/ome (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7fc77c461d00>: Failed to establish a new connection: [Errno -2] Name or service not known'))
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
ERROR: script returned exit code 1
Finished: FAILURE