Console Output
+ export BASE_REPO=omero-matlab.git
+ BASE_REPO=omero-matlab.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-matlab-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-matlab-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-08-18 00:57:36,435 [ scc.config] DEBUG Found github.token
2025-08-18 00:57:36,436 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:36,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-18 00:57:36,890 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:37,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-18 00:57:37,333 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:37,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-18 00:57:37,506 [ scc.gh] DEBUG 4670 remaining from 5000 (Reset at 01:08
2025-08-18 00:57:37,507 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-18 00:57:37,509 [ scc.git] DEBUG Check current status
2025-08-18 00:57:37,509 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-18 00:57:37,512 [ scc.git] DEBUG 7d4ddff change date
2025-08-18 00:57:37,512 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-18 00:57:37,555 [ scc.config] DEBUG Found remote.origin.url
2025-08-18 00:57:37,758 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:38,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-08-18 00:57:38,316 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:38,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-18 00:57:38,842 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:39,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-18 00:57:39,298 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:39,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-18 00:57:39,746 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:39,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-18 00:57:39,951 [ scc.git] DEBUG Resetting...
2025-08-18 00:57:39,951 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-18 00:57:39,955 [ scc.git] DEBUG HEAD is now at 7d4ddff change date
2025-08-18 00:57:39,955 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-18 00:57:39,996 [ scc.git] DEBUG Check current status
2025-08-18 00:57:39,996 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-18 00:57:39,998 [ scc.git] DEBUG 7d4ddff change date
2025-08-18 00:57:39,998 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-18 00:57:40,039 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-08-18 00:57:40,039 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-08-18 00:57:40,039 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-08-18 00:57:40,039 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-08-18 00:57:40,039 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-08-18 00:57:40,039 [ scc.repo] DEBUG ## PRs found:
2025-08-18 00:57:40,201 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:40,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-08-18 00:57:40,715 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:41,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-08-18 00:57:41,048 [ scc.repo] DEBUG - PR 38 jburel 'Update dependency'
2025-08-18 00:57:41,048 [ scc.repo] DEBUG ## Branches found:
2025-08-18 00:57:41,048 [ scc.git] DEBUG Get sha1 of %s
2025-08-18 00:57:41,049 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-18 00:57:41,051 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-18 00:57:41,053 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-18 00:57:41,053 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-18 00:57:41,056 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-18 00:57:41,059 [ scc.git] DEBUG Already up to date.
2025-08-18 00:57:41,059 [ scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-08-18 00:57:41,336 [ scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-08-18 00:57:41,336 [ scc.git] DEBUG * branch refs/pull/38/head -> FETCH_HEAD
2025-08-18 00:57:41,340 [ scc.git] DEBUG ## Unique users: []
2025-08-18 00:57:41,341 [ scc.git] DEBUG Get sha1 of %s
2025-08-18 00:57:41,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-18 00:57:41,343 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-18 00:57:41,346 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-18 00:57:41,348 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-18 00:57:41,356 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-18 00:57:41,358 [ scc.git] DEBUG .github/workflows/gradle.yml | 19 ++++++++++++-------
2025-08-18 00:57:41,358 [ scc.git] DEBUG build.gradle | 4 ++--
2025-08-18 00:57:41,358 [ scc.git] DEBUG 2 files changed, 14 insertions(+), 9 deletions(-)
2025-08-18 00:57:41,360 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:41,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-18 00:57:41,584 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-18 00:57:41,624 [ scc.git] DEBUG Get sha1 of %s
2025-08-18 00:57:41,624 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-18 00:57:41,626 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-18 00:57:41,630 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f29cbd44b10> has no local changes
2025-08-18 00:57:41,630 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-matlab
Already up to date.
Merged PRs:
- PR 38 jburel 'Update dependency'
Generated by OMERO-matlab-push#455 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/455/)'
2025-08-18 00:57:41,637 [ scc.git] DEBUG [detached HEAD a70504e] merge master -Dorg -Snone
2025-08-18 00:57:41,638 [ scc.merge] INFO Repository: ome/omero-matlab
2025-08-18 00:57:41,638 [ scc.merge] INFO Already up to date.
2025-08-18 00:57:41,638 [ scc.merge] INFO
2025-08-18 00:57:41,638 [ scc.merge] INFO Merged PRs:
2025-08-18 00:57:41,638 [ scc.merge] INFO - PR 38 jburel 'Update dependency'
2025-08-18 00:57:41,638 [ scc.merge] INFO
2025-08-18 00:57:41,638 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-18 00:57:41,638 [ scc.git] DEBUG Calling 'git remote'
Merge all submodules2025-08-18 00:57:42,092 [ scc.config] DEBUG Found github.token
2025-08-18 00:57:42,093 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:42,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-18 00:57:42,532 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:42,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-18 00:57:43,043 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:43,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-18 00:57:43,227 [ scc.gh] DEBUG 4660 remaining from 5000 (Reset at 01:08
2025-08-18 00:57:43,227 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-18 00:57:43,230 [ scc.git] DEBUG Check current status
2025-08-18 00:57:43,230 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-18 00:57:43,232 [ scc.git] DEBUG a70504e merge master -Dorg -Snone
2025-08-18 00:57:43,233 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-18 00:57:43,275 [ scc.config] DEBUG Found remote.origin.url
2025-08-18 00:57:43,478 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:43,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-08-18 00:57:44,050 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:44,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-18 00:57:44,520 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:44,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-18 00:57:44,964 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:45,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-18 00:57:45,426 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:45,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-18 00:57:45,645 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-18 00:57:45,686 [ scc.git] DEBUG Resetting...
2025-08-18 00:57:45,686 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-18 00:57:45,691 [ scc.git] DEBUG HEAD is now at a70504e merge master -Dorg -Snone
2025-08-18 00:57:45,691 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-18 00:57:45,730 [ scc.git] DEBUG Check current status
2025-08-18 00:57:45,730 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-18 00:57:45,733 [ scc.git] DEBUG a70504e merge master -Dorg -Snone
2025-08-18 00:57:45,733 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-18 00:57:45,771 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-08-18 00:57:45,771 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-08-18 00:57:45,771 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-08-18 00:57:45,771 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-08-18 00:57:45,771 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-08-18 00:57:45,771 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-08-18 00:57:45,771 [ scc.repo] DEBUG ## PRs found:
2025-08-18 00:57:45,896 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:46,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-08-18 00:57:46,420 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:46,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-08-18 00:57:46,937 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:47,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-08-18 00:57:47,481 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:47,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-18 00:57:48,001 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:48,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-18 00:57:48,481 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:48,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-08-18 00:57:49,041 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:49,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/statuses/a8d38c69bde53075007fff870c8bb5f671b87737?per_page=1 HTTP/1.1" 200 2
2025-08-18 00:57:49,232 [ scc.repo] DEBUG - PR 38 jburel 'Update dependency'
2025-08-18 00:57:49,232 [ scc.repo] DEBUG ## Branches found:
2025-08-18 00:57:49,232 [ scc.git] DEBUG Get sha1 of %s
2025-08-18 00:57:49,232 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-18 00:57:49,235 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-18 00:57:49,237 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-18 00:57:49,237 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-18 00:57:49,241 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-18 00:57:49,244 [ scc.git] DEBUG Already up to date.
2025-08-18 00:57:49,244 [ scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-08-18 00:57:49,526 [ scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-08-18 00:57:49,526 [ scc.git] DEBUG * branch refs/pull/38/head -> FETCH_HEAD
2025-08-18 00:57:49,530 [ scc.git] DEBUG ## Unique users: []
2025-08-18 00:57:49,530 [ scc.git] DEBUG Get sha1 of %s
2025-08-18 00:57:49,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-18 00:57:49,532 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-18 00:57:49,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-18 00:57:49,537 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-18 00:57:49,540 [ scc.git] DEBUG Already up to date.
2025-08-18 00:57:49,541 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-18 00:57:49,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-18 00:57:49,720 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-18 00:57:49,761 [ scc.git] DEBUG Get sha1 of %s
2025-08-18 00:57:49,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-18 00:57:49,763 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-18 00:57:49,802 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-18 00:57:49,805 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ea88ab310> has no local changes
2025-08-18 00:57:49,806 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-matlab
Already up to date.
Merged PRs:
- PR 38 jburel 'Update dependency'
Generated by OMERO-matlab-push#455 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/455/)'
2025-08-18 00:57:49,812 [ scc.git] DEBUG [detached HEAD 38922ee] merge master -Dorg -Ssuccess-only
2025-08-18 00:57:49,812 [ scc.merge] INFO Repository: ome/omero-matlab
2025-08-18 00:57:49,812 [ scc.merge] INFO Already up to date.
2025-08-18 00:57:49,812 [ scc.merge] INFO
2025-08-18 00:57:49,812 [ scc.merge] INFO Merged PRs:
2025-08-18 00:57:49,812 [ scc.merge] INFO - PR 38 jburel 'Update dependency'
2025-08-18 00:57:49,812 [ scc.merge] INFO
2025-08-18 00:57:49,812 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-18 00:57:49,812 [ scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.10.1 to 5.10.4-SNAPSHOT
Commit all component version changes
[detached HEAD d626e98] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-18 00:57:56,184 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-matlab/tree/merge_ci