Skip to content

Console Output

+ export BASE_REPO=omero-matlab.git
+ BASE_REPO=omero-matlab.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-matlab-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-matlab-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-09-02 01:05:03,970 [  scc.config] DEBUG Found github.token
2025-09-02 01:05:03,971 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:04,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-02 01:05:04,465 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:04,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-02 01:05:04,930 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:05,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-09-02 01:05:05,114 [      scc.gh] DEBUG 2707 remaining from 5000 (Reset at 01:09
2025-09-02 01:05:05,114 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-02 01:05:05,117 [     scc.git] DEBUG Check current status
2025-09-02 01:05:05,117 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-02 01:05:05,120 [     scc.git] DEBUG 7d4ddff change date
2025-09-02 01:05:05,120 [     scc.git] DEBUG Calling 'git submodule status'
2025-09-02 01:05:05,164 [  scc.config] DEBUG Found remote.origin.url
2025-09-02 01:05:05,366 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:05,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-09-02 01:05:05,915 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:06,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-02 01:05:06,450 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:06,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-02 01:05:06,910 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:07,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-02 01:05:07,362 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:07,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-02 01:05:07,585 [     scc.git] DEBUG Resetting...
2025-09-02 01:05:07,585 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-09-02 01:05:07,589 [     scc.git] DEBUG HEAD is now at 7d4ddff change date
2025-09-02 01:05:07,589 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-09-02 01:05:07,632 [     scc.git] DEBUG Check current status
2025-09-02 01:05:07,632 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-02 01:05:07,634 [     scc.git] DEBUG 7d4ddff change date
2025-09-02 01:05:07,634 [     scc.git] DEBUG Calling 'git submodule status'
2025-09-02 01:05:07,673 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-09-02 01:05:07,673 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-09-02 01:05:07,673 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-09-02 01:05:07,673 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-09-02 01:05:07,673 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-09-02 01:05:07,674 [    scc.repo] DEBUG ## PRs found:
2025-09-02 01:05:07,837 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:08,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-09-02 01:05:08,388 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:08,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-09-02 01:05:08,646 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-09-02 01:05:08,647 [    scc.repo] DEBUG ## Branches found:
2025-09-02 01:05:08,647 [     scc.git] DEBUG Get sha1 of %s
2025-09-02 01:05:08,647 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-02 01:05:08,649 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-02 01:05:08,652 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-02 01:05:08,652 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-02 01:05:08,655 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-02 01:05:08,658 [     scc.git] DEBUG Already up to date.

2025-09-02 01:05:08,658 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-09-02 01:05:08,951 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-09-02 01:05:08,951 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-09-02 01:05:08,955 [     scc.git] DEBUG ## Unique users: []
2025-09-02 01:05:08,955 [     scc.git] DEBUG Get sha1 of %s
2025-09-02 01:05:08,955 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-02 01:05:08,957 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-09-02 01:05:08,960 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-02 01:05:08,962 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-09-02 01:05:08,970 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-02 01:05:08,973 [     scc.git] DEBUG  .github/workflows/gradle.yml | 19 ++++++++++++-------
2025-09-02 01:05:08,973 [     scc.git] DEBUG  build.gradle                 |  4 ++--
2025-09-02 01:05:08,973 [     scc.git] DEBUG  2 files changed, 14 insertions(+), 9 deletions(-)
2025-09-02 01:05:08,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:09,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-02 01:05:09,212 [     scc.git] DEBUG Calling 'git submodule update'
2025-09-02 01:05:09,252 [     scc.git] DEBUG Get sha1 of %s
2025-09-02 01:05:09,253 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-02 01:05:09,255 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-09-02 01:05:09,258 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7b976e2190> has no local changes
2025-09-02 01:05:09,259 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#470 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/470/)'
2025-09-02 01:05:09,265 [     scc.git] DEBUG [detached HEAD 342ee9f] merge master -Dorg -Snone
2025-09-02 01:05:09,266 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-09-02 01:05:09,266 [   scc.merge] INFO  Already up to date.
2025-09-02 01:05:09,266 [   scc.merge] INFO  
2025-09-02 01:05:09,266 [   scc.merge] INFO  Merged PRs:
2025-09-02 01:05:09,266 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-09-02 01:05:09,266 [   scc.merge] INFO  
2025-09-02 01:05:09,266 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-09-02 01:05:09,266 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2025-09-02 01:05:09,705 [  scc.config] DEBUG Found github.token
2025-09-02 01:05:09,706 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:09,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-02 01:05:10,162 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:10,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-02 01:05:10,614 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:10,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-09-02 01:05:10,810 [      scc.gh] DEBUG 2685 remaining from 5000 (Reset at 01:09
2025-09-02 01:05:10,811 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-02 01:05:10,813 [     scc.git] DEBUG Check current status
2025-09-02 01:05:10,813 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-02 01:05:10,816 [     scc.git] DEBUG 342ee9f merge master -Dorg -Snone
2025-09-02 01:05:10,816 [     scc.git] DEBUG Calling 'git submodule status'
2025-09-02 01:05:10,858 [  scc.config] DEBUG Found remote.origin.url
2025-09-02 01:05:11,062 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:11,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-09-02 01:05:11,623 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:11,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-02 01:05:12,215 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:12,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-02 01:05:12,684 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:12,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-02 01:05:13,149 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:13,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-02 01:05:13,390 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-02 01:05:13,430 [     scc.git] DEBUG Resetting...
2025-09-02 01:05:13,430 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-09-02 01:05:13,434 [     scc.git] DEBUG HEAD is now at 342ee9f merge master -Dorg -Snone
2025-09-02 01:05:13,434 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-09-02 01:05:13,474 [     scc.git] DEBUG Check current status
2025-09-02 01:05:13,474 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-02 01:05:13,477 [     scc.git] DEBUG 342ee9f merge master -Dorg -Snone
2025-09-02 01:05:13,477 [     scc.git] DEBUG Calling 'git submodule status'
2025-09-02 01:05:13,515 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-09-02 01:05:13,515 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-09-02 01:05:13,515 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-09-02 01:05:13,515 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-09-02 01:05:13,515 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-09-02 01:05:13,515 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2025-09-02 01:05:13,516 [    scc.repo] DEBUG ## PRs found:
2025-09-02 01:05:13,642 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:13,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-09-02 01:05:14,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:14,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-09-02 01:05:14,688 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:15,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-09-02 01:05:15,273 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:15,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-02 01:05:15,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:16,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-02 01:05:16,343 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:16,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-09-02 01:05:16,905 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:17,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/statuses/a8d38c69bde53075007fff870c8bb5f671b87737?per_page=1 HTTP/1.1" 200 2
2025-09-02 01:05:17,101 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-09-02 01:05:17,101 [    scc.repo] DEBUG ## Branches found:
2025-09-02 01:05:17,102 [     scc.git] DEBUG Get sha1 of %s
2025-09-02 01:05:17,102 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-02 01:05:17,104 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-02 01:05:17,106 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-02 01:05:17,107 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-02 01:05:17,109 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-02 01:05:17,113 [     scc.git] DEBUG Already up to date.

2025-09-02 01:05:17,113 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-09-02 01:05:17,391 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-09-02 01:05:17,391 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-09-02 01:05:17,395 [     scc.git] DEBUG ## Unique users: []
2025-09-02 01:05:17,395 [     scc.git] DEBUG Get sha1 of %s
2025-09-02 01:05:17,395 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-02 01:05:17,397 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-09-02 01:05:17,400 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-02 01:05:17,402 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-09-02 01:05:17,405 [     scc.git] DEBUG Already up to date.
2025-09-02 01:05:17,407 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-02 01:05:17,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-02 01:05:17,710 [     scc.git] DEBUG Calling 'git submodule update'
2025-09-02 01:05:17,751 [     scc.git] DEBUG Get sha1 of %s
2025-09-02 01:05:17,751 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-02 01:05:17,753 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-02 01:05:17,793 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-09-02 01:05:17,797 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7781dd55d0> has no local changes
2025-09-02 01:05:17,797 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#470 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/470/)'
2025-09-02 01:05:17,803 [     scc.git] DEBUG [detached HEAD 56e6d34] merge master -Dorg -Ssuccess-only
2025-09-02 01:05:17,804 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-09-02 01:05:17,804 [   scc.merge] INFO  Already up to date.
2025-09-02 01:05:17,804 [   scc.merge] INFO  
2025-09-02 01:05:17,804 [   scc.merge] INFO  Merged PRs:
2025-09-02 01:05:17,804 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-09-02 01:05:17,804 [   scc.merge] INFO  
2025-09-02 01:05:17,804 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-09-02 01:05:17,804 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.10.1 to 5.10.4-SNAPSHOT
Commit all component version changes
[detached HEAD 3800f9c] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-02 01:05:24,201 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-matlab/tree/merge_ci