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+ export BASE_REPO=omero-matlab.git
+ BASE_REPO=omero-matlab.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-matlab-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-matlab-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-09-23 00:55:39,089 [  scc.config] DEBUG Found github.token
2025-09-23 00:55:39,091 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-23 00:55:39,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-23 00:55:39,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-23 00:55:40,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-09-23 00:55:40,074 [      scc.gh] DEBUG 2419 remaining from 5000 (Reset at 01:09
2025-09-23 00:55:40,075 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-23 00:55:40,077 [     scc.git] DEBUG Check current status
2025-09-23 00:55:40,077 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-23 00:55:40,080 [     scc.git] DEBUG 7d4ddff change date
2025-09-23 00:55:40,080 [     scc.git] DEBUG Calling 'git submodule status'
2025-09-23 00:55:40,118 [  scc.config] DEBUG Found remote.origin.url
2025-09-23 00:55:40,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-09-23 00:55:41,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-23 00:55:41,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-23 00:55:41,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-23 00:55:42,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-23 00:55:42,323 [     scc.git] DEBUG Resetting...
2025-09-23 00:55:42,323 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-09-23 00:55:42,327 [     scc.git] DEBUG HEAD is now at 7d4ddff change date
2025-09-23 00:55:42,327 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-09-23 00:55:42,364 [     scc.git] DEBUG Check current status
2025-09-23 00:55:42,364 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-23 00:55:42,366 [     scc.git] DEBUG 7d4ddff change date
2025-09-23 00:55:42,366 [     scc.git] DEBUG Calling 'git submodule status'
2025-09-23 00:55:42,400 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-09-23 00:55:42,400 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-09-23 00:55:42,400 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-09-23 00:55:42,400 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-09-23 00:55:42,400 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-09-23 00:55:42,400 [    scc.repo] DEBUG ## PRs found:
2025-09-23 00:55:42,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-09-23 00:55:43,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-09-23 00:55:43,266 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-09-23 00:55:43,266 [    scc.repo] DEBUG ## Branches found:
2025-09-23 00:55:43,266 [     scc.git] DEBUG Get sha1 of %s
2025-09-23 00:55:43,266 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-23 00:55:43,268 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-23 00:55:43,270 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-23 00:55:43,270 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-23 00:55:43,273 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-23 00:55:43,275 [     scc.git] DEBUG Already up to date.

2025-09-23 00:55:43,275 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-09-23 00:55:43,563 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-09-23 00:55:43,563 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-09-23 00:55:43,567 [     scc.git] DEBUG ## Unique users: []
2025-09-23 00:55:43,567 [     scc.git] DEBUG Get sha1 of %s
2025-09-23 00:55:43,567 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-23 00:55:43,569 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-09-23 00:55:43,571 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-23 00:55:43,573 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-09-23 00:55:43,581 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-23 00:55:43,583 [     scc.git] DEBUG  .github/workflows/gradle.yml | 19 ++++++++++++-------
2025-09-23 00:55:43,583 [     scc.git] DEBUG  build.gradle                 |  4 ++--
2025-09-23 00:55:43,583 [     scc.git] DEBUG  2 files changed, 14 insertions(+), 9 deletions(-)
2025-09-23 00:55:43,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-23 00:55:43,728 [     scc.git] DEBUG Calling 'git submodule update'
2025-09-23 00:55:43,764 [     scc.git] DEBUG Get sha1 of %s
2025-09-23 00:55:43,764 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-23 00:55:43,766 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-09-23 00:55:43,770 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcffdf67d0> has no local changes
2025-09-23 00:55:43,770 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#487 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/487/)'
2025-09-23 00:55:43,775 [     scc.git] DEBUG [detached HEAD 76fa80b] merge master -Dorg -Snone
2025-09-23 00:55:43,776 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-09-23 00:55:43,776 [   scc.merge] INFO  Already up to date.
2025-09-23 00:55:43,776 [   scc.merge] INFO  
2025-09-23 00:55:43,776 [   scc.merge] INFO  Merged PRs:
2025-09-23 00:55:43,776 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-09-23 00:55:43,776 [   scc.merge] INFO  
2025-09-23 00:55:43,776 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-09-23 00:55:43,776 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2025-09-23 00:55:44,188 [  scc.config] DEBUG Found github.token
2025-09-23 00:55:44,189 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-23 00:55:44,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-23 00:55:44,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-23 00:55:45,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-09-23 00:55:45,195 [      scc.gh] DEBUG 2409 remaining from 5000 (Reset at 01:09
2025-09-23 00:55:45,196 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-23 00:55:45,198 [     scc.git] DEBUG Check current status
2025-09-23 00:55:45,198 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-23 00:55:45,200 [     scc.git] DEBUG 76fa80b merge master -Dorg -Snone
2025-09-23 00:55:45,200 [     scc.git] DEBUG Calling 'git submodule status'
2025-09-23 00:55:45,238 [  scc.config] DEBUG Found remote.origin.url
2025-09-23 00:55:45,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-09-23 00:55:46,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-23 00:55:46,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-23 00:55:47,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-23 00:55:47,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-23 00:55:47,472 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-23 00:55:47,508 [     scc.git] DEBUG Resetting...
2025-09-23 00:55:47,509 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-09-23 00:55:47,512 [     scc.git] DEBUG HEAD is now at 76fa80b merge master -Dorg -Snone
2025-09-23 00:55:47,512 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-09-23 00:55:47,548 [     scc.git] DEBUG Check current status
2025-09-23 00:55:47,548 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-23 00:55:47,550 [     scc.git] DEBUG 76fa80b merge master -Dorg -Snone
2025-09-23 00:55:47,550 [     scc.git] DEBUG Calling 'git submodule status'
2025-09-23 00:55:47,583 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-09-23 00:55:47,583 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-09-23 00:55:47,583 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-09-23 00:55:47,583 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-09-23 00:55:47,583 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-09-23 00:55:47,583 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2025-09-23 00:55:47,583 [    scc.repo] DEBUG ## PRs found:
2025-09-23 00:55:48,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-09-23 00:55:48,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-09-23 00:55:49,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-09-23 00:55:49,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-23 00:55:50,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-23 00:55:50,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-09-23 00:55:50,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/statuses/a8d38c69bde53075007fff870c8bb5f671b87737?per_page=1 HTTP/1.1" 200 2
2025-09-23 00:55:50,877 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-09-23 00:55:50,877 [    scc.repo] DEBUG ## Branches found:
2025-09-23 00:55:50,877 [     scc.git] DEBUG Get sha1 of %s
2025-09-23 00:55:50,877 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-23 00:55:50,879 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-23 00:55:50,881 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-23 00:55:50,881 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-23 00:55:50,884 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-23 00:55:50,887 [     scc.git] DEBUG Already up to date.

2025-09-23 00:55:50,887 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-09-23 00:55:51,176 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-09-23 00:55:51,176 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-09-23 00:55:51,181 [     scc.git] DEBUG ## Unique users: []
2025-09-23 00:55:51,181 [     scc.git] DEBUG Get sha1 of %s
2025-09-23 00:55:51,181 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-23 00:55:51,183 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-09-23 00:55:51,185 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-23 00:55:51,187 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-09-23 00:55:51,190 [     scc.git] DEBUG Already up to date.
2025-09-23 00:55:51,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-23 00:55:51,336 [     scc.git] DEBUG Calling 'git submodule update'
2025-09-23 00:55:51,371 [     scc.git] DEBUG Get sha1 of %s
2025-09-23 00:55:51,371 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-23 00:55:51,373 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-23 00:55:51,408 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-09-23 00:55:51,411 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7efc8b79c090> has no local changes
2025-09-23 00:55:51,411 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#487 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/487/)'
2025-09-23 00:55:51,416 [     scc.git] DEBUG [detached HEAD c2a8489] merge master -Dorg -Ssuccess-only
2025-09-23 00:55:51,416 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-09-23 00:55:51,416 [   scc.merge] INFO  Already up to date.
2025-09-23 00:55:51,416 [   scc.merge] INFO  
2025-09-23 00:55:51,417 [   scc.merge] INFO  Merged PRs:
2025-09-23 00:55:51,417 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-09-23 00:55:51,417 [   scc.merge] INFO  
2025-09-23 00:55:51,417 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-09-23 00:55:51,417 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.10.1 to 5.10.4-SNAPSHOT
Commit all component version changes
[detached HEAD 8bde3de] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-23 00:55:57,314 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-matlab/tree/merge_ci