Skipping 225 KB..
Full LogTestTestTestTestTestTestTestTestTestTestTestTestTest
2025-08-20 00:58:18,621 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:18,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-08-20 00:58:19,187 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:19,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2
2025-08-20 00:58:19,418 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-20 00:58:19,670 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:19,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2025-08-20 00:58:20,185 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:20,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2025-08-20 00:58:20,723 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:21,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-08-20 00:58:21,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:21,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-20 00:58:21,781 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:22,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-08-20 00:58:22,380 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:22,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2025-08-20 00:58:22,625 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2025-08-20 00:58:22,625 [ scc.repo] DEBUG ## Branches found:
2025-08-20 00:58:22,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-08-20 00:58:22,625 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:58:22,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:22,628 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-20 00:58:22,630 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-20 00:58:22,631 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-20 00:58:22,634 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-20 00:58:22,637 [ scc.git] DEBUG Already up to date.
2025-08-20 00:58:22,637 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2025-08-20 00:58:23,552 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-08-20 00:58:23,552 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2025-08-20 00:58:23,556 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head'
2025-08-20 00:58:23,848 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-08-20 00:58:23,848 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD
2025-08-20 00:58:23,852 [ scc.git] DEBUG ## Unique users: []
2025-08-20 00:58:23,853 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:58:23,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:23,855 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-08-20 00:58:23,859 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:23,861 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-08-20 00:58:23,877 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-20 00:58:23,880 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2025-08-20 00:58:23,880 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2025-08-20 00:58:23,880 [ scc.git] DEBUG requirements.txt | 2 +-
2025-08-20 00:58:23,880 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2025-08-20 00:58:23,880 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2025-08-20 00:58:23,880 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2025-08-20 00:58:23,883 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:24,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:58:24,092 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-08-20 00:58:24,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:24,098 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-08-20 00:58:24,107 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-20 00:58:24,110 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-08-20 00:58:24,110 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-20 00:58:24,344 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:24,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:58:24,560 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-20 00:58:24,600 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:58:24,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:24,602 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-20 00:58:24,642 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-20 00:58:24,646 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff0f03eee10> has no local changes
2025-08-20 00:58:24,647 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#509 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/)'
2025-08-20 00:58:24,654 [ scc.git] DEBUG [detached HEAD 2ef51bd] merge master -Dorg -Ssuccess-only
2025-08-20 00:58:24,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:58:24,654 [ scc.repo] DEBUG ## PRs found:
2025-08-20 00:58:24,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:25,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2025-08-20 00:58:25,436 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:25,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2025-08-20 00:58:25,968 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:26,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2025-08-20 00:58:26,478 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:26,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-08-20 00:58:27,048 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:27,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-20 00:58:27,560 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:27,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-08-20 00:58:28,105 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:28,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2025-08-20 00:58:28,311 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-08-20 00:58:28,563 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:28,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2025-08-20 00:58:29,131 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:29,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2025-08-20 00:58:29,632 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:29,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-08-20 00:58:30,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:30,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-20 00:58:30,717 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:30,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-08-20 00:58:31,199 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:31,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2025-08-20 00:58:31,416 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-08-20 00:58:31,416 [ scc.repo] DEBUG ## Branches found:
2025-08-20 00:58:31,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-08-20 00:58:31,416 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:58:31,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:31,419 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-20 00:58:31,421 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-20 00:58:31,421 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-20 00:58:31,424 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-20 00:58:31,432 [ scc.git] DEBUG Updating 3cd120c..55060a2
2025-08-20 00:58:31,668 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:32,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None
2025-08-20 00:58:32,108 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2025-08-20 00:58:33,045 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-08-20 00:58:33,045 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2025-08-20 00:58:33,049 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2025-08-20 00:58:33,664 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-08-20 00:58:33,664 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2025-08-20 00:58:33,669 [ scc.git] DEBUG ## Unique users: []
2025-08-20 00:58:33,669 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:58:33,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:33,671 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-08-20 00:58:33,676 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:33,678 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-08-20 00:58:34,008 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2025-08-20 00:58:34,009 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2025-08-20 00:58:34,009 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-08-20 00:58:34,009 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-08-20 00:58:34,009 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-20 00:58:34,009 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-20 00:58:34,012 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-20 00:58:34,017 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-08-20 00:58:34,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:34,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:58:34,237 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-08-20 00:58:34,241 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-20 00:58:34,244 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#509](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/cli.py
- src/omero_metadata/populate.py
--conflicts
2025-08-20 00:58:34,247 [ scc.config] DEBUG Found github.token
2025-08-20 00:58:34,247 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2025-08-20 00:58:34,247 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2025-08-20 00:58:34,251 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:34,254 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2025-08-20 00:58:34,361 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-08-20 00:58:34,362 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-08-20 00:58:34,362 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2025-08-20 00:58:34,362 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-20 00:58:34,362 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-20 00:58:34,365 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-20 00:58:34,371 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-08-20 00:58:34,489 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:34,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:58:34,694 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7'
2025-08-20 00:58:34,698 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-20 00:58:34,701 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#509](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2025-08-20 00:58:34,703 [ scc.config] DEBUG Found github.token
2025-08-20 00:58:34,703 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2025-08-20 00:58:34,704 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-20 00:58:34,745 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:58:34,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:34,748 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-20 00:58:34,787 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-20 00:58:34,791 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff0f37db710> has no local changes
2025-08-20 00:58:34,792 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#509 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/)'
2025-08-20 00:58:34,799 [ scc.git] DEBUG [detached HEAD 2119338] merge master -Dorg -Ssuccess-only
2025-08-20 00:58:34,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:58:34,800 [ scc.repo] DEBUG ## PRs found:
2025-08-20 00:58:34,946 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:35,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2025-08-20 00:58:35,544 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:35,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None
2025-08-20 00:58:36,082 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:36,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-08-20 00:58:36,620 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:36,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-20 00:58:37,161 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:37,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-20 00:58:37,678 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:38,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-08-20 00:58:38,304 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:38,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2
2025-08-20 00:58:38,598 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-20 00:58:38,849 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:39,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None
2025-08-20 00:58:39,129 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-20 00:58:39,380 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:39,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-08-20 00:58:39,979 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:40,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-20 00:58:40,523 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:40,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-20 00:58:41,078 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:41,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-08-20 00:58:41,699 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:41,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2
2025-08-20 00:58:41,931 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-08-20 00:58:42,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:42,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None
2025-08-20 00:58:42,482 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-20 00:58:42,734 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:43,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-08-20 00:58:43,317 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:43,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-20 00:58:43,853 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:44,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-20 00:58:44,449 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:44,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-08-20 00:58:45,062 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:45,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2
2025-08-20 00:58:45,262 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-08-20 00:58:45,513 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:45,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None
2025-08-20 00:58:46,027 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:46,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2025-08-20 00:58:46,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:46,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2025-08-20 00:58:47,090 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:47,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2025-08-20 00:58:47,606 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:47,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2025-08-20 00:58:48,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:48,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2025-08-20 00:58:48,636 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:48,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2025-08-20 00:58:48,888 [ scc.repo] DEBUG ## Branches found:
2025-08-20 00:58:48,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-08-20 00:58:48,888 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:58:48,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:48,891 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-20 00:58:48,893 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-20 00:58:48,893 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-20 00:58:48,897 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-20 00:58:48,900 [ scc.git] DEBUG Already up to date.
2025-08-20 00:58:48,900 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head'
2025-08-20 00:58:49,180 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-08-20 00:58:49,180 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD
2025-08-20 00:58:49,185 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head'
2025-08-20 00:58:49,469 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-08-20 00:58:49,469 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD
2025-08-20 00:58:49,474 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head'
2025-08-20 00:58:49,820 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-08-20 00:58:49,821 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD
2025-08-20 00:58:49,825 [ scc.git] DEBUG ## Unique users: []
2025-08-20 00:58:49,825 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:58:49,825 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:49,827 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0'
2025-08-20 00:58:49,884 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:49,886 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0'
2025-08-20 00:58:49,950 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-20 00:58:49,954 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++----------------------------
2025-08-20 00:58:49,954 [ scc.git] DEBUG package.json | 2 +-
2025-08-20 00:58:49,954 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-)
2025-08-20 00:58:49,957 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:50,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:58:50,139 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80'
2025-08-20 00:58:50,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:50,192 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80'
2025-08-20 00:58:50,313 [ scc.git] DEBUG Auto-merging package-lock.json
2025-08-20 00:58:50,313 [ scc.git] DEBUG Auto-merging package.json
2025-08-20 00:58:50,314 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-20 00:58:50,317 [ scc.git] DEBUG package-lock.json | 18 ++++++++++--------
2025-08-20 00:58:50,318 [ scc.git] DEBUG package.json | 2 +-
2025-08-20 00:58:50,318 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-)
2025-08-20 00:58:50,390 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:50,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:58:50,586 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-08-20 00:58:50,589 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:50,592 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-08-20 00:58:50,600 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-20 00:58:50,603 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-08-20 00:58:50,603 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-20 00:58:50,838 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:51,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:58:51,055 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-20 00:58:51,095 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:58:51,095 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:51,098 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-20 00:58:51,137 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-20 00:58:51,142 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff0f35c0210> has no local changes
2025-08-20 00:58:51,142 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#509 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/)'
2025-08-20 00:58:51,149 [ scc.git] DEBUG [detached HEAD 94d3042] merge master -Dorg -Ssuccess-only
2025-08-20 00:58:51,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:58:51,149 [ scc.repo] DEBUG ## PRs found:
2025-08-20 00:58:51,307 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:51,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2
2025-08-20 00:58:51,522 [ scc.repo] DEBUG ## Branches found:
2025-08-20 00:58:51,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-08-20 00:58:51,522 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:58:51,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:51,525 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-20 00:58:51,527 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-20 00:58:51,527 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-20 00:58:51,530 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-20 00:58:51,533 [ scc.git] DEBUG Already up to date.
2025-08-20 00:58:51,533 [ scc.git] DEBUG ## Unique users: []
2025-08-20 00:58:51,533 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:58:51,533 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:51,536 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-20 00:58:51,575 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:58:51,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:51,578 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-20 00:58:51,616 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-20 00:58:51,619 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff0f3610550> has no local changes
2025-08-20 00:58:51,619 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Generated by OMERO-plugins-push#509 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/)'
2025-08-20 00:58:51,625 [ scc.git] DEBUG [detached HEAD 1cd4c62] merge master -Dorg -Ssuccess-only
2025-08-20 00:58:51,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:58:51,626 [ scc.repo] DEBUG ## PRs found:
2025-08-20 00:58:51,775 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:52,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2025-08-20 00:58:52,332 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:52,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None
2025-08-20 00:58:52,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:53,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None
2025-08-20 00:58:53,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:53,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-08-20 00:58:53,951 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:54,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-20 00:58:54,475 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:54,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-20 00:58:54,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:55,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-08-20 00:58:55,552 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:55,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None
2025-08-20 00:58:56,062 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:56,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-08-20 00:58:56,606 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:56,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None
2025-08-20 00:58:56,845 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions'
2025-08-20 00:58:57,096 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:57,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None
2025-08-20 00:58:57,389 [ scc.repo] DEBUG ## Branches found:
2025-08-20 00:58:57,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-08-20 00:58:57,389 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:58:57,389 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:57,392 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-20 00:58:57,394 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-20 00:58:57,394 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-20 00:58:57,398 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-20 00:58:57,401 [ scc.git] DEBUG Already up to date.
2025-08-20 00:58:57,401 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head'
2025-08-20 00:58:58,355 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2025-08-20 00:58:58,355 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD
2025-08-20 00:58:58,360 [ scc.git] DEBUG ## Unique users: []
2025-08-20 00:58:58,360 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:58:58,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:58,362 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3'
2025-08-20 00:58:58,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:58,368 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3'
2025-08-20 00:58:58,376 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-20 00:58:58,379 [ scc.git] DEBUG setup.py | 4 +-
2025-08-20 00:58:58,379 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 +
2025-08-20 00:58:58,379 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++--
2025-08-20 00:58:58,379 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-)
2025-08-20 00:58:58,382 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:58,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:58:58,575 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-20 00:58:58,616 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:58:58,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:58:58,618 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-20 00:58:58,659 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-20 00:58:58,663 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff0f0404b10> has no local changes
2025-08-20 00:58:58,663 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
Generated by OMERO-plugins-push#509 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/)'
2025-08-20 00:58:58,670 [ scc.git] DEBUG [detached HEAD 3c5b179] merge master -Dorg -Ssuccess-only
2025-08-20 00:58:58,670 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:58:58,670 [ scc.repo] DEBUG ## PRs found:
2025-08-20 00:58:58,827 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:59,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2025-08-20 00:58:59,498 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:58:59,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2025-08-20 00:59:00,050 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:00,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2025-08-20 00:59:00,587 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:00,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-08-20 00:59:01,235 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:01,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-20 00:59:01,727 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:02,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-08-20 00:59:02,348 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:02,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2025-08-20 00:59:02,572 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2025-08-20 00:59:02,572 [ scc.repo] DEBUG ## Branches found:
2025-08-20 00:59:02,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-08-20 00:59:02,572 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:02,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:02,575 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-20 00:59:02,578 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-20 00:59:02,578 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-20 00:59:02,581 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-20 00:59:02,584 [ scc.git] DEBUG Already up to date.
2025-08-20 00:59:02,584 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-08-20 00:59:03,000 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-08-20 00:59:03,001 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-08-20 00:59:03,005 [ scc.git] DEBUG ## Unique users: []
2025-08-20 00:59:03,005 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:03,005 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:03,007 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-08-20 00:59:03,011 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:03,013 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-08-20 00:59:03,186 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2025-08-20 00:59:03,186 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2025-08-20 00:59:03,186 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2025-08-20 00:59:03,186 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2025-08-20 00:59:03,186 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2025-08-20 00:59:03,186 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2025-08-20 00:59:03,186 [ scc.git] DEBUG Auto-merging setup.py
2025-08-20 00:59:03,186 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2025-08-20 00:59:03,186 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-20 00:59:03,187 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-20 00:59:03,189 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e'
2025-08-20 00:59:03,194 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build
2025-08-20 00:59:03,196 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:03,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:03,415 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-08-20 00:59:03,419 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e'
2025-08-20 00:59:03,422 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#509](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/urls.py
- omero_signup/signup_settings.py
- omero_signup/views.py
- setup.py
--conflicts
2025-08-20 00:59:03,424 [ scc.config] DEBUG Found github.token
2025-08-20 00:59:03,424 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2025-08-20 00:59:03,424 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-20 00:59:03,464 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:03,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:03,466 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-20 00:59:03,505 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-20 00:59:03,509 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff0f3504590> has no local changes
2025-08-20 00:59:03,509 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#509 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/)'
2025-08-20 00:59:03,516 [ scc.git] DEBUG [detached HEAD 873ad50] merge master -Dorg -Ssuccess-only
2025-08-20 00:59:03,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:03,516 [ scc.repo] DEBUG ## PRs found:
2025-08-20 00:59:03,667 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:04,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2025-08-20 00:59:04,271 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:04,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None
2025-08-20 00:59:04,827 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:05,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-08-20 00:59:05,418 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:05,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-20 00:59:05,949 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:06,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-20 00:59:06,499 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:06,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-08-20 00:59:07,006 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:07,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2
2025-08-20 00:59:07,248 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps'
2025-08-20 00:59:07,500 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:07,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None
2025-08-20 00:59:08,050 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:08,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None
2025-08-20 00:59:08,553 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:08,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None
2025-08-20 00:59:09,152 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:09,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-20 00:59:09,674 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:09,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-20 00:59:10,185 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:10,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None
2025-08-20 00:59:10,703 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:10,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None
2025-08-20 00:59:11,236 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:11,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2025-08-20 00:59:11,752 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:11,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2025-08-20 00:59:12,239 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:12,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-08-20 00:59:12,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:13,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-20 00:59:13,287 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:13,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-08-20 00:59:13,851 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:14,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2025-08-20 00:59:14,092 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-08-20 00:59:14,093 [ scc.repo] DEBUG ## Branches found:
2025-08-20 00:59:14,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-08-20 00:59:14,093 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:14,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:14,096 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-20 00:59:14,098 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-20 00:59:14,098 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-20 00:59:14,101 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-20 00:59:14,104 [ scc.git] DEBUG Already up to date.
2025-08-20 00:59:14,105 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2025-08-20 00:59:14,411 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-08-20 00:59:14,412 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2025-08-20 00:59:14,417 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head'
2025-08-20 00:59:14,756 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-08-20 00:59:14,756 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD
2025-08-20 00:59:14,760 [ scc.git] DEBUG ## Unique users: []
2025-08-20 00:59:14,760 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:14,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:14,763 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2025-08-20 00:59:14,767 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:14,769 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2025-08-20 00:59:14,829 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-20 00:59:14,833 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2025-08-20 00:59:14,833 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2025-08-20 00:59:14,833 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2025-08-20 00:59:14,833 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2025-08-20 00:59:14,833 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2025-08-20 00:59:14,833 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2025-08-20 00:59:14,833 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2025-08-20 00:59:14,833 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2025-08-20 00:59:14,833 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2025-08-20 00:59:14,835 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2025-08-20 00:59:14,835 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2025-08-20 00:59:14,835 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2025-08-20 00:59:14,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:14,836 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2025-08-20 00:59:14,836 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2025-08-20 00:59:14,836 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2025-08-20 00:59:14,836 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2025-08-20 00:59:14,836 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2025-08-20 00:59:14,836 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2025-08-20 00:59:14,836 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2025-08-20 00:59:14,836 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2025-08-20 00:59:14,836 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2025-08-20 00:59:14,836 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2025-08-20 00:59:14,836 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2025-08-20 00:59:14,836 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2025-08-20 00:59:14,837 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2025-08-20 00:59:14,837 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2025-08-20 00:59:15,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:15,032 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-08-20 00:59:15,037 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:15,039 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-08-20 00:59:15,049 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-20 00:59:15,052 [ scc.git] DEBUG docker | 1 +
2025-08-20 00:59:15,052 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2025-08-20 00:59:15,284 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:15,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:15,506 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-20 00:59:15,547 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:15,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:15,550 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-20 00:59:15,588 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-20 00:59:15,592 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff0f042bfd0> has no local changes
2025-08-20 00:59:15,592 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Generated by OMERO-plugins-push#509 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/)'
2025-08-20 00:59:15,599 [ scc.git] DEBUG [detached HEAD d0cf204] merge master -Dorg -Ssuccess-only
2025-08-20 00:59:15,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:15,599 [ scc.repo] DEBUG ## PRs found:
2025-08-20 00:59:15,758 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:15,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2025-08-20 00:59:15,988 [ scc.repo] DEBUG ## Branches found:
2025-08-20 00:59:15,988 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-08-20 00:59:15,988 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:15,988 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:15,990 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-20 00:59:15,993 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-20 00:59:15,993 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-20 00:59:15,996 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-20 00:59:15,999 [ scc.git] DEBUG Already up to date.
2025-08-20 00:59:15,999 [ scc.git] DEBUG ## Unique users: []
2025-08-20 00:59:15,999 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:15,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:16,001 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-20 00:59:16,042 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:16,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:16,044 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-20 00:59:16,084 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-20 00:59:16,087 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff0f041a6d0> has no local changes
2025-08-20 00:59:16,087 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Generated by OMERO-plugins-push#509 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/)'
2025-08-20 00:59:16,093 [ scc.git] DEBUG [detached HEAD db55118] merge master -Dorg -Ssuccess-only
2025-08-20 00:59:16,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:16,094 [ scc.repo] DEBUG ## PRs found:
2025-08-20 00:59:16,240 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:16,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2
2025-08-20 00:59:16,442 [ scc.repo] DEBUG ## Branches found:
2025-08-20 00:59:16,442 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-08-20 00:59:16,443 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:16,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:16,445 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-20 00:59:16,447 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-20 00:59:16,448 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-20 00:59:16,450 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-20 00:59:16,459 [ scc.git] DEBUG Updating deab817..160d894
2025-08-20 00:59:16,694 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:17,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None
2025-08-20 00:59:17,203 [ scc.git] DEBUG ## Unique users: []
2025-08-20 00:59:17,203 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:17,203 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:17,205 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-20 00:59:17,247 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:17,247 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:17,250 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-20 00:59:17,290 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-20 00:59:17,293 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff0f35fdb50> has no local changes
2025-08-20 00:59:17,293 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Generated by OMERO-plugins-push#509 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/)'
2025-08-20 00:59:17,300 [ scc.git] DEBUG [detached HEAD 3fce600] merge master -Dorg -Ssuccess-only
2025-08-20 00:59:17,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:17,301 [ scc.git] INFO Overriding base-branch from master to main
2025-08-20 00:59:17,301 [ scc.repo] DEBUG ## PRs found:
2025-08-20 00:59:17,454 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:17,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2025-08-20 00:59:18,026 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:18,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None
2025-08-20 00:59:18,546 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:18,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None
2025-08-20 00:59:19,150 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:19,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None
2025-08-20 00:59:19,717 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:19,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-20 00:59:20,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:20,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-20 00:59:20,780 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:21,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2025-08-20 00:59:21,294 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:21,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2025-08-20 00:59:21,813 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:22,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2025-08-20 00:59:22,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:22,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-08-20 00:59:22,884 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:23,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-20 00:59:23,383 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:23,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-08-20 00:59:23,885 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:24,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2025-08-20 00:59:24,103 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-08-20 00:59:24,103 [ scc.repo] DEBUG ## Branches found:
2025-08-20 00:59:24,103 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-08-20 00:59:24,103 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:24,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:24,106 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2025-08-20 00:59:24,108 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-20 00:59:24,108 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2025-08-20 00:59:24,111 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2025-08-20 00:59:24,114 [ scc.git] DEBUG Already up to date.
2025-08-20 00:59:24,114 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2025-08-20 00:59:24,552 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-08-20 00:59:24,552 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2025-08-20 00:59:24,557 [ scc.git] DEBUG ## Unique users: []
2025-08-20 00:59:24,557 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:24,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:24,559 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-08-20 00:59:24,563 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:24,565 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-08-20 00:59:24,674 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2025-08-20 00:59:24,674 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2025-08-20 00:59:24,674 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-20 00:59:24,675 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-20 00:59:24,678 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-08-20 00:59:24,682 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build
2025-08-20 00:59:24,685 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:24,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:24,900 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-08-20 00:59:24,903 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-08-20 00:59:24,906 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#509](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2025-08-20 00:59:24,908 [ scc.config] DEBUG Found github.token
2025-08-20 00:59:24,908 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2025-08-20 00:59:24,908 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-20 00:59:24,949 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:24,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:24,951 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-20 00:59:24,991 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-20 00:59:24,994 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff0f041ad10> has no local changes
2025-08-20 00:59:24,994 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#509 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/)'
2025-08-20 00:59:25,001 [ scc.git] DEBUG [detached HEAD fb044cf] merge master -Dorg -Ssuccess-only
2025-08-20 00:59:25,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:25,002 [ scc.repo] DEBUG ## PRs found:
2025-08-20 00:59:25,152 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:25,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2025-08-20 00:59:25,362 [ scc.repo] DEBUG ## Branches found:
2025-08-20 00:59:25,362 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-08-20 00:59:25,362 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:25,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:25,364 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-20 00:59:25,366 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-20 00:59:25,367 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-20 00:59:25,369 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-20 00:59:25,372 [ scc.git] DEBUG Already up to date.
2025-08-20 00:59:25,372 [ scc.git] DEBUG ## Unique users: []
2025-08-20 00:59:25,372 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:25,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:25,375 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-20 00:59:25,412 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:25,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:25,415 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-20 00:59:25,452 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-20 00:59:25,455 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff0f046f190> has no local changes
2025-08-20 00:59:25,455 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Generated by OMERO-plugins-push#509 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/)'
2025-08-20 00:59:25,461 [ scc.git] DEBUG [detached HEAD 0465d15] merge master -Dorg -Ssuccess-only
2025-08-20 00:59:25,461 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:25,462 [ scc.repo] DEBUG ## PRs found:
2025-08-20 00:59:25,614 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:25,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2025-08-20 00:59:25,875 [ scc.repo] DEBUG ## Branches found:
2025-08-20 00:59:25,875 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-08-20 00:59:25,875 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:25,875 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:25,877 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-20 00:59:25,879 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-20 00:59:25,880 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-20 00:59:25,882 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-20 00:59:25,885 [ scc.git] DEBUG Already up to date.
2025-08-20 00:59:25,885 [ scc.git] DEBUG ## Unique users: []
2025-08-20 00:59:25,886 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:25,886 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:25,888 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-20 00:59:25,928 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:25,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:25,930 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-20 00:59:25,970 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-20 00:59:25,973 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff0f0477550> has no local changes
2025-08-20 00:59:25,973 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Generated by OMERO-plugins-push#509 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/)'
2025-08-20 00:59:25,980 [ scc.git] DEBUG [detached HEAD f5fa5d9] merge master -Dorg -Ssuccess-only
2025-08-20 00:59:25,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:25,980 [ scc.repo] DEBUG ## PRs found:
2025-08-20 00:59:26,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:26,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2025-08-20 00:59:26,696 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:26,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2025-08-20 00:59:27,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:27,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2025-08-20 00:59:27,752 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:28,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-08-20 00:59:28,342 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:28,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-20 00:59:28,857 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:29,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-08-20 00:59:29,382 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:29,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2025-08-20 00:59:29,602 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2025-08-20 00:59:29,602 [ scc.repo] DEBUG ## Branches found:
2025-08-20 00:59:29,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-08-20 00:59:29,602 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:29,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:29,605 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-20 00:59:29,607 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-20 00:59:29,607 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-20 00:59:29,610 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-20 00:59:29,613 [ scc.git] DEBUG Already up to date.
2025-08-20 00:59:29,613 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2025-08-20 00:59:29,950 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2025-08-20 00:59:29,950 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2025-08-20 00:59:29,955 [ scc.git] DEBUG ## Unique users: []
2025-08-20 00:59:29,955 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:29,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:29,957 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-08-20 00:59:29,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:29,962 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-08-20 00:59:30,064 [ scc.git] DEBUG Auto-merging Dockerfile
2025-08-20 00:59:30,064 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2025-08-20 00:59:30,064 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-20 00:59:30,064 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-20 00:59:30,067 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-08-20 00:59:30,072 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-08-20 00:59:30,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:30,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:30,291 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-08-20 00:59:30,294 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-08-20 00:59:30,296 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#509](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2025-08-20 00:59:30,299 [ scc.config] DEBUG Found github.token
2025-08-20 00:59:30,299 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2025-08-20 00:59:30,299 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-20 00:59:30,339 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:30,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:30,341 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-20 00:59:30,380 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-20 00:59:30,384 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff0f0476850> has no local changes
2025-08-20 00:59:30,384 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#509 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/)'
2025-08-20 00:59:30,391 [ scc.git] DEBUG [detached HEAD cba06c8] merge master -Dorg -Ssuccess-only
2025-08-20 00:59:30,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:30,391 [ scc.git] INFO Overriding base-branch from master to develop
2025-08-20 00:59:30,391 [ scc.repo] DEBUG ## PRs found:
2025-08-20 00:59:30,543 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:30,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-08-20 00:59:31,163 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:31,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-08-20 00:59:31,703 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:31,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-08-20 00:59:32,195 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:32,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-08-20 00:59:32,677 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:32,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-20 00:59:33,227 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:33,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-20 00:59:33,762 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:34,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-08-20 00:59:34,302 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:34,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-08-20 00:59:34,505 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-08-20 00:59:34,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:35,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-08-20 00:59:35,278 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:35,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-08-20 00:59:35,796 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:36,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-08-20 00:59:36,269 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:36,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-20 00:59:36,780 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:37,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-08-20 00:59:37,265 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:37,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-08-20 00:59:37,628 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-08-20 00:59:37,880 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:38,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-08-20 00:59:38,461 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:38,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-08-20 00:59:39,003 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:39,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-08-20 00:59:39,529 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:39,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-08-20 00:59:39,791 [ scc.repo] DEBUG ## Branches found:
2025-08-20 00:59:39,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-08-20 00:59:39,791 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:39,791 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:39,794 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-08-20 00:59:39,796 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-20 00:59:39,796 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-08-20 00:59:39,799 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-08-20 00:59:39,810 [ scc.git] DEBUG Updating 4b4c755..573db34
2025-08-20 00:59:40,042 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:40,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None
2025-08-20 00:59:40,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:41,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None
2025-08-20 00:59:41,253 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-08-20 00:59:41,868 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-08-20 00:59:41,868 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-08-20 00:59:41,873 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-08-20 00:59:42,449 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-08-20 00:59:42,449 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-08-20 00:59:42,454 [ scc.git] DEBUG ## Unique users: []
2025-08-20 00:59:42,454 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:42,454 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:42,456 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-20 00:59:42,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:42,464 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-20 00:59:42,631 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-08-20 00:59:42,631 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-20 00:59:42,632 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-20 00:59:42,634 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150'
2025-08-20 00:59:42,639 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0
2025-08-20 00:59:42,641 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:42,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:42,840 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-20 00:59:42,845 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150'
2025-08-20 00:59:42,849 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#509](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-08-20 00:59:42,852 [ scc.config] DEBUG Found github.token
2025-08-20 00:59:42,852 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-08-20 00:59:42,852 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-08-20 00:59:42,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:42,859 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-08-20 00:59:42,869 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-20 00:59:42,872 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-08-20 00:59:42,872 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-08-20 00:59:43,092 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:43,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:43,302 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-20 00:59:43,342 [ scc.git] DEBUG Get sha1 of %s
2025-08-20 00:59:43,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-20 00:59:43,345 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-20 00:59:43,384 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-20 00:59:43,388 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff0f049c490> has no local changes
2025-08-20 00:59:43,388 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..573db34
Previously merged:
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#509 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/)'
2025-08-20 00:59:43,395 [ scc.git] DEBUG [detached HEAD ecd1c1e] merge master -Dorg -Ssuccess-only
2025-08-20 00:59:43,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:43,395 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-20 00:59:43,474 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2025-08-20 00:59:43,554 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:43,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:43,763 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2025-08-20 00:59:43,765 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2025-08-20 00:59:44,010 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:44,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:44,205 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2025-08-20 00:59:44,208 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2025-08-20 00:59:44,453 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:44,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:44,653 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2025-08-20 00:59:44,655 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2025-08-20 00:59:44,900 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:45,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:45,124 [ scc.config] DEBUG Found submodule.omero-figure.url
2025-08-20 00:59:45,369 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:45,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:45,609 [ scc.config] DEBUG Found submodule.omero-figure.branch
2025-08-20 00:59:45,611 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2025-08-20 00:59:45,855 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:46,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:46,064 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2025-08-20 00:59:46,066 [ scc.config] DEBUG Found submodule.omero-gallery.url
2025-08-20 00:59:46,311 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:46,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:46,534 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2025-08-20 00:59:46,536 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2025-08-20 00:59:46,781 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:46,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:46,978 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2025-08-20 00:59:46,980 [ scc.config] DEBUG Found submodule.omero-mapr.url
2025-08-20 00:59:47,225 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:47,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:47,476 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2025-08-20 00:59:47,478 [ scc.config] DEBUG Found submodule.omero-metadata.url
2025-08-20 00:59:47,724 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:47,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:47,936 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2025-08-20 00:59:47,938 [ scc.config] DEBUG Found submodule.omero-parade.url
2025-08-20 00:59:48,184 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:48,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:48,379 [ scc.config] DEBUG Found submodule.omero-parade.branch
2025-08-20 00:59:48,381 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2025-08-20 00:59:48,627 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:48,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:48,830 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2025-08-20 00:59:48,832 [ scc.config] DEBUG Found submodule.omero-rois.url
2025-08-20 00:59:49,078 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:49,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:49,280 [ scc.config] DEBUG Found submodule.omero-signup.url
2025-08-20 00:59:49,525 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:49,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:49,805 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2025-08-20 00:59:50,050 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:50,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:50,252 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2025-08-20 00:59:50,254 [ scc.config] DEBUG Found submodule.omero-upload.url
2025-08-20 00:59:50,499 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:50,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:50,703 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2025-08-20 00:59:50,948 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:51,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:51,170 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2025-08-20 00:59:51,415 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:51,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:51,609 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2025-08-20 00:59:51,611 [ scc.config] DEBUG Found submodule.omero-weberror.url
2025-08-20 00:59:51,856 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:52,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:52,051 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2025-08-20 00:59:52,053 [ scc.config] DEBUG Found submodule.omero-webtest.url
2025-08-20 00:59:52,298 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:52,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:52,571 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2025-08-20 00:59:52,573 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2025-08-20 00:59:52,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:53,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:53,019 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2025-08-20 00:59:53,021 [ scc.config] DEBUG Found submodule.scripts.url
2025-08-20 00:59:53,267 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-20 00:59:53,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-20 00:59:53,471 [ scc.config] DEBUG Found submodule.scripts.branch
2025-08-20 00:59:53,471 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-20 00:59:53,564 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff0f5d61690> has local changes
2025-08-20 00:59:53,564 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 180 will-moore 'Register command' (status: failure)
- PR 174 will-moore 'Skip wells' (stage: draft)
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..f7eea7c
Previously merged:
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
Repository: ome/omero-figure
Excluded PRs:
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..d2c6f5bc
Previously merged:
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 612 will-moore 'Script version'
- PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
Conflicting PRs (not included):
- PR 616 Rdornier 'Fix labels around border'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 637 Rdornier 'Fix scalebar position'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..bb94cf8
Previously merged:
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-prometheus-tools
Already up to date.
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Repository: ome/omero-upload
Already up to date.
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Repository: openmicroscopy/omero-webtest
Already up to date.
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..573db34
Previously merged:
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#509 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/509/)'
2025-08-20 00:59:53,577 [ scc.git] DEBUG [detached HEAD 42409a8] merge master -Dorg -Ssuccess-only
2025-08-20 00:59:53,577 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2025-08-20 00:59:53,577 [ scc.merge] INFO Repository: ome/omero-plugins
2025-08-20 00:59:53,578 [ scc.merge] INFO Already up to date.
2025-08-20 00:59:53,578 [ scc.merge] INFO
2025-08-20 00:59:53,578 [ scc.merge] INFO Merged PRs:
2025-08-20 00:59:53,578 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-08-20 00:59:53,578 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-08-20 00:59:53,578 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-08-20 00:59:53,578 [ scc.merge] INFO
2025-08-20 00:59:53,578 [ scc.merge] INFO Repository: ome/minimal-omero-client
2025-08-20 00:59:53,578 [ scc.merge] INFO Already up to date.
2025-08-20 00:59:53,578 [ scc.merge] INFO
2025-08-20 00:59:53,578 [ scc.merge] INFO
2025-08-20 00:59:53,578 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2025-08-20 00:59:53,578 [ scc.merge] INFO Excluded PRs:
2025-08-20 00:59:53,578 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2025-08-20 00:59:53,578 [ scc.merge] INFO Already up to date.
2025-08-20 00:59:53,578 [ scc.merge] INFO
2025-08-20 00:59:53,578 [ scc.merge] INFO
2025-08-20 00:59:53,578 [ scc.merge] INFO Repository: ome/omero-cli-render
2025-08-20 00:59:53,578 [ scc.merge] INFO Excluded PRs:
2025-08-20 00:59:53,578 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
2025-08-20 00:59:53,578 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2025-08-20 00:59:53,578 [ scc.merge] INFO Already up to date.
2025-08-20 00:59:53,578 [ scc.merge] INFO
2025-08-20 00:59:53,578 [ scc.merge] INFO Merged PRs:
2025-08-20 00:59:53,578 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2025-08-20 00:59:53,578 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands'
2025-08-20 00:59:53,578 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names'
2025-08-20 00:59:53,578 [ scc.merge] INFO
2025-08-20 00:59:53,578 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2025-08-20 00:59:53,578 [ scc.merge] INFO Excluded PRs:
2025-08-20 00:59:53,578 [ scc.merge] INFO - PR 180 will-moore 'Register command' (status: failure)
2025-08-20 00:59:53,578 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' (stage: draft)
2025-08-20 00:59:53,578 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure)
2025-08-20 00:59:53,578 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft)
2025-08-20 00:59:53,578 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
2025-08-20 00:59:53,578 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft)
2025-08-20 00:59:53,578 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft)
2025-08-20 00:59:53,578 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
2025-08-20 00:59:53,579 [ scc.merge] INFO Updating 11d3587..f7eea7c
2025-08-20 00:59:53,579 [ scc.merge] INFO Previously merged:
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0'
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer'
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()'
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests'
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-20 00:59:53,579 [ scc.merge] INFO
2025-08-20 00:59:53,579 [ scc.merge] INFO Merged PRs:
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-08-20 00:59:53,579 [ scc.merge] INFO
2025-08-20 00:59:53,579 [ scc.merge] INFO Repository: ome/omero-figure
2025-08-20 00:59:53,579 [ scc.merge] INFO Excluded PRs:
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft)
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2025-08-20 00:59:53,579 [ scc.merge] INFO Updating 9cc36cde..d2c6f5bc
2025-08-20 00:59:53,579 [ scc.merge] INFO Previously merged:
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity'
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite'
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-20 00:59:53,579 [ scc.merge] INFO
2025-08-20 00:59:53,579 [ scc.merge] INFO Merged PRs:
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois'
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature'
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst'
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 612 will-moore 'Script version'
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
2025-08-20 00:59:53,579 [ scc.merge] INFO
2025-08-20 00:59:53,579 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border'
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2025-08-20 00:59:53,579 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position'
2025-08-20 00:59:53,579 [ scc.merge] INFO
2025-08-20 00:59:53,579 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2025-08-20 00:59:53,579 [ scc.merge] INFO Already up to date.
2025-08-20 00:59:53,579 [ scc.merge] INFO
2025-08-20 00:59:53,580 [ scc.merge] INFO Merged PRs:
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2025-08-20 00:59:53,580 [ scc.merge] INFO
2025-08-20 00:59:53,580 [ scc.merge] INFO Repository: ome/omero-gallery
2025-08-20 00:59:53,580 [ scc.merge] INFO Already up to date.
2025-08-20 00:59:53,580 [ scc.merge] INFO
2025-08-20 00:59:53,580 [ scc.merge] INFO Merged PRs:
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-08-20 00:59:53,580 [ scc.merge] INFO
2025-08-20 00:59:53,580 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-08-20 00:59:53,580 [ scc.merge] INFO
2025-08-20 00:59:53,580 [ scc.merge] INFO Repository: ome/omero-iviewer
2025-08-20 00:59:53,580 [ scc.merge] INFO Excluded PRs:
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure)
2025-08-20 00:59:53,580 [ scc.merge] INFO Updating 7a798ce..bb94cf8
2025-08-20 00:59:53,580 [ scc.merge] INFO Previously merged:
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-20 00:59:53,580 [ scc.merge] INFO
2025-08-20 00:59:53,580 [ scc.merge] INFO Merged PRs:
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-08-20 00:59:53,580 [ scc.merge] INFO
2025-08-20 00:59:53,580 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-08-20 00:59:53,580 [ scc.merge] INFO
2025-08-20 00:59:53,580 [ scc.merge] INFO Repository: ome/omero-mapr
2025-08-20 00:59:53,580 [ scc.merge] INFO Excluded PRs:
2025-08-20 00:59:53,580 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2025-08-20 00:59:53,580 [ scc.merge] INFO Already up to date.
2025-08-20 00:59:53,581 [ scc.merge] INFO
2025-08-20 00:59:53,581 [ scc.merge] INFO Merged PRs:
2025-08-20 00:59:53,581 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2025-08-20 00:59:53,581 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-20 00:59:53,581 [ scc.merge] INFO
2025-08-20 00:59:53,581 [ scc.merge] INFO Repository: ome/omero-metadata
2025-08-20 00:59:53,581 [ scc.merge] INFO Updating 3cd120c..55060a2
2025-08-20 00:59:53,581 [ scc.merge] INFO Previously merged:
2025-08-20 00:59:53,581 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-20 00:59:53,581 [ scc.merge] INFO
2025-08-20 00:59:53,581 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-20 00:59:53,581 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-08-20 00:59:53,581 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-08-20 00:59:53,581 [ scc.merge] INFO
2025-08-20 00:59:53,581 [ scc.merge] INFO Repository: ome/omero-parade
2025-08-20 00:59:53,581 [ scc.merge] INFO Excluded PRs:
2025-08-20 00:59:53,581 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
2025-08-20 00:59:53,581 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2025-08-20 00:59:53,581 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2025-08-20 00:59:53,581 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2025-08-20 00:59:53,581 [ scc.merge] INFO Already up to date.
2025-08-20 00:59:53,581 [ scc.merge] INFO
2025-08-20 00:59:53,581 [ scc.merge] INFO Merged PRs:
2025-08-20 00:59:53,581 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-08-20 00:59:53,581 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-08-20 00:59:53,581 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-20 00:59:53,581 [ scc.merge] INFO
2025-08-20 00:59:53,581 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2025-08-20 00:59:53,581 [ scc.merge] INFO Already up to date.
2025-08-20 00:59:53,581 [ scc.merge] INFO
2025-08-20 00:59:53,581 [ scc.merge] INFO
2025-08-20 00:59:53,581 [ scc.merge] INFO Repository: ome/omero-rois
2025-08-20 00:59:53,581 [ scc.merge] INFO Excluded PRs:
2025-08-20 00:59:53,581 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-08-20 00:59:53,581 [ scc.merge] INFO Already up to date.
2025-08-20 00:59:53,581 [ scc.merge] INFO
2025-08-20 00:59:53,581 [ scc.merge] INFO Merged PRs:
2025-08-20 00:59:53,581 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions'
2025-08-20 00:59:53,581 [ scc.merge] INFO
2025-08-20 00:59:53,581 [ scc.merge] INFO Repository: ome/omero-signup
2025-08-20 00:59:53,581 [ scc.merge] INFO Already up to date.
2025-08-20 00:59:53,581 [ scc.merge] INFO
2025-08-20 00:59:53,581 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-20 00:59:53,582 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2025-08-20 00:59:53,582 [ scc.merge] INFO
2025-08-20 00:59:53,582 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2025-08-20 00:59:53,582 [ scc.merge] INFO Excluded PRs:
2025-08-20 00:59:53,582 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles)
2025-08-20 00:59:53,582 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
2025-08-20 00:59:53,582 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
2025-08-20 00:59:53,582 [ scc.merge] INFO Already up to date.
2025-08-20 00:59:53,582 [ scc.merge] INFO
2025-08-20 00:59:53,582 [ scc.merge] INFO Merged PRs:
2025-08-20 00:59:53,582 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-08-20 00:59:53,582 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps'
2025-08-20 00:59:53,582 [ scc.merge] INFO
2025-08-20 00:59:53,582 [ scc.merge] INFO Repository: ome/omero-upload
2025-08-20 00:59:53,582 [ scc.merge] INFO Already up to date.
2025-08-20 00:59:53,582 [ scc.merge] INFO
2025-08-20 00:59:53,582 [ scc.merge] INFO
2025-08-20 00:59:53,582 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2025-08-20 00:59:53,582 [ scc.merge] INFO Updating deab817..160d894
2025-08-20 00:59:53,582 [ scc.merge] INFO Previously merged:
2025-08-20 00:59:53,582 [ scc.merge] INFO - PR 20 jburel 'Build'
2025-08-20 00:59:53,582 [ scc.merge] INFO
2025-08-20 00:59:53,582 [ scc.merge] INFO
2025-08-20 00:59:53,582 [ scc.merge] INFO Repository: ome/omero-web-zarr
2025-08-20 00:59:53,582 [ scc.merge] INFO Excluded PRs:
2025-08-20 00:59:53,582 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure)
2025-08-20 00:59:53,582 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2025-08-20 00:59:53,582 [ scc.merge] INFO Already up to date.
2025-08-20 00:59:53,582 [ scc.merge] INFO
2025-08-20 00:59:53,582 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-20 00:59:53,582 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-08-20 00:59:53,582 [ scc.merge] INFO
2025-08-20 00:59:53,582 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2025-08-20 00:59:53,582 [ scc.merge] INFO Already up to date.
2025-08-20 00:59:53,582 [ scc.merge] INFO
2025-08-20 00:59:53,582 [ scc.merge] INFO
2025-08-20 00:59:53,582 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2025-08-20 00:59:53,582 [ scc.merge] INFO Already up to date.
2025-08-20 00:59:53,582 [ scc.merge] INFO
2025-08-20 00:59:53,582 [ scc.merge] INFO
2025-08-20 00:59:53,582 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2025-08-20 00:59:53,582 [ scc.merge] INFO Already up to date.
2025-08-20 00:59:53,583 [ scc.merge] INFO
2025-08-20 00:59:53,583 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-20 00:59:53,583 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2025-08-20 00:59:53,583 [ scc.merge] INFO
2025-08-20 00:59:53,583 [ scc.merge] INFO Repository: ome/scripts
2025-08-20 00:59:53,583 [ scc.merge] INFO Excluded PRs:
2025-08-20 00:59:53,583 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-08-20 00:59:53,583 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-08-20 00:59:53,583 [ scc.merge] INFO Updating 4b4c755..573db34
2025-08-20 00:59:53,583 [ scc.merge] INFO Previously merged:
2025-08-20 00:59:53,583 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes'
2025-08-20 00:59:53,583 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests'
2025-08-20 00:59:53,583 [ scc.merge] INFO
2025-08-20 00:59:53,583 [ scc.merge] INFO Merged PRs:
2025-08-20 00:59:53,583 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-08-20 00:59:53,583 [ scc.merge] INFO
2025-08-20 00:59:53,583 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-20 00:59:53,583 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-08-20 00:59:53,583 [ scc.merge] INFO
2025-08-20 00:59:53,583 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-20 00:59:53,583 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,585 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-08-20 00:59:53,585 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,587 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,587 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-08-20 00:59:53,587 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-08-20 00:59:53,590 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-08-20 00:59:53,592 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-08-20 00:59:53,594 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,596 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,597 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-08-20 00:59:53,597 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-08-20 00:59:53,599 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-08-20 00:59:53,601 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-08-20 00:59:53,603 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-08-20 00:59:53,606 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-08-20 00:59:53,608 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-08-20 00:59:53,610 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-08-20 00:59:53,612 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,615 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-08-20 00:59:53,615 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-08-20 00:59:53,617 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-08-20 00:59:53,619 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-08-20 00:59:53,621 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,623 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,624 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-08-20 00:59:53,624 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-08-20 00:59:53,626 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-08-20 00:59:53,628 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-08-20 00:59:53,630 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-20 00:59:53,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-08-20 00:59:53,633 [ scc.git] DEBUG Calling 'git remote'
2025-08-20 00:59:53,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 82934c4] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 4777ef8
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from ce6e13c
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 11d3587
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 9cc36cde
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from 3b6c05a
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 2a621da
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from 7a798ce
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 0a557da
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from 3cd120c
nothing to commit, working tree clean
Entering 'omero-parade'
HEAD detached from fb5ae86
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from eb47378
nothing to commit, working tree clean
Entering 'omero-rois'
HEAD detached from bdfeb5e
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from be76813
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from cda3ec6
nothing to commit, working tree clean
Entering 'omero-upload'
HEAD detached from 100f6ae
nothing to commit, working tree clean
Entering 'omero-virtual-microscope'
HEAD detached from deab817
nothing to commit, working tree clean
Entering 'omero-web-zarr'
HEAD detached from 8f3c313
nothing to commit, working tree clean
Entering 'omero-weberror'
HEAD detached from 70b01ed
nothing to commit, working tree clean
Entering 'omero-webtest'
HEAD detached from 5bfef29
nothing to commit, working tree clean
Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
nothing to commit, working tree clean
Entering 'scripts'
HEAD detached from 4b4c755
nothing to commit, working tree clean
[detached HEAD 5e509f5] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-08-20 01:00:44,013 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-08-20 01:00:54,227 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-08-20 01:00:56,940 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-08-20 01:01:02,368 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-08-20 01:01:44,570 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS
![[Jenkins]](/jenkins/static/9161e9ff/images/svgs/logo.svg){kind=logo}
