![[Jenkins]](/jenkins/static/9161e9ff/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 616 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 89851408b797e66df0f2e993b5e6fc50984c08a1 (refs/remotes/origin/master) Commit message: "Merge pull request #330 from ome/dependabot/submodules/omero-scripts-03b9116" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 89851408b797e66df0f2e993b5e6fc50984c08a1 # timeout=10 > git rev-list --no-walk 89851408b797e66df0f2e993b5e6fc50984c08a1 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 545 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-scripts # timeout=10 + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.4 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-45.0.7-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-45.0.7-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.8.3-py3-none-any.whl (161 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.23-py3-none-any.whl (118 kB) Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.2 certifi-2025.8.3 cffi-2.0.0 charset_normalizer-3.4.3 cryptography-45.0.7 future-1.0.0 idna-3.10 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-09-12 00:30:17,506 [ scc.config] DEBUG Found github.token 2025-09-12 00:30:17,507 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-09-12 00:30:17,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:30:18,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:30:18,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-09-12 00:30:18,493 [ scc.gh] DEBUG 4939 remaining from 5000 (Reset at 01:09 2025-09-12 00:30:18,494 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-12 00:30:18,497 [ scc.git] DEBUG Check current status 2025-09-12 00:30:18,497 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-12 00:30:18,500 [ scc.git] DEBUG 8985140 Merge pull request #330 from ome/dependabot/submodules/omero-scripts-03b9116 2025-09-12 00:30:18,500 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-12 00:30:18,542 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-09-12 00:30:18,546 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-09-12 00:30:18,551 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-09-12 00:30:18,556 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-09-12 00:30:18,561 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-09-12 00:30:18,564 [ scc.config] DEBUG Found remote.origin.url 2025-09-12 00:30:19,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-09-12 00:30:19,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-12 00:30:19,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-12 00:30:20,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-12 00:30:20,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-12 00:30:20,848 [ scc.git] DEBUG Resetting... 2025-09-12 00:30:20,848 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-09-12 00:30:20,853 [ scc.git] DEBUG HEAD is now at 8985140 Merge pull request #330 from ome/dependabot/submodules/omero-scripts-03b9116 2025-09-12 00:30:20,853 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-09-12 00:30:20,909 [ scc.git] DEBUG Check current status 2025-09-12 00:30:20,909 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-12 00:30:20,912 [ scc.git] DEBUG 8985140 Merge pull request #330 from ome/dependabot/submodules/omero-scripts-03b9116 2025-09-12 00:30:20,912 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-12 00:30:20,953 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-09-12 00:30:20,957 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-09-12 00:30:20,962 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-09-12 00:30:20,966 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-09-12 00:30:20,971 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-09-12 00:30:20,972 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-09-12 00:30:20,972 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-09-12 00:30:20,972 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-09-12 00:30:20,972 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-09-12 00:30:20,972 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-09-12 00:30:20,972 [ scc.repo] DEBUG ## PRs found: 2025-09-12 00:30:21,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-09-12 00:30:21,272 [ scc.repo] DEBUG ## Branches found: 2025-09-12 00:30:21,272 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:30:21,272 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:30:21,274 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-12 00:30:21,277 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-12 00:30:21,277 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-12 00:30:21,280 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-12 00:30:21,283 [ scc.git] DEBUG Already up to date. 2025-09-12 00:30:21,283 [ scc.git] DEBUG ## Unique users: [] 2025-09-12 00:30:21,283 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:30:21,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:30:21,285 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-12 00:30:21,328 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:30:21,328 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:30:21,330 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-12 00:30:21,366 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0bf76db150> has no local changes 2025-09-12 00:30:21,366 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#517 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/517/)' 2025-09-12 00:30:21,392 [ scc.git] DEBUG [detached HEAD 92f260e] merge master -Dorg -Snone 2025-09-12 00:30:21,392 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-09-12 00:30:21,392 [ scc.merge] INFO Already up to date. 2025-09-12 00:30:21,392 [ scc.merge] INFO 2025-09-12 00:30:21,393 [ scc.merge] INFO 2025-09-12 00:30:21,393 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-09-12 00:30:21,393 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' From https://github.com/ome/omero-py 70b6235a..edf7ff58 master -> origin/master * [new tag] v5.21.1 -> v5.21.1 Submodule path 'omero-py': checked out 'edf7ff58e57e27228b5ea00d94d4a0932978788b' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-09-12 00:30:23,586 [ scc.config] DEBUG Found github.token 2025-09-12 00:30:23,587 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-09-12 00:30:23,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:30:24,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:30:24,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-09-12 00:30:24,581 [ scc.gh] DEBUG 4931 remaining from 5000 (Reset at 01:09 2025-09-12 00:30:24,582 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-12 00:30:24,584 [ scc.git] DEBUG Check current status 2025-09-12 00:30:24,584 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-12 00:30:24,587 [ scc.git] DEBUG 92f260e merge master -Dorg -Snone 2025-09-12 00:30:24,588 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-12 00:30:24,630 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-09-12 00:30:24,634 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-09-12 00:30:24,639 [ scc.git] DEBUG +edf7ff58e57e27228b5ea00d94d4a0932978788b omero-py (v5.21.1-1-gedf7ff58) 2025-09-12 00:30:24,644 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-09-12 00:30:24,648 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-09-12 00:30:24,651 [ scc.config] DEBUG Found remote.origin.url 2025-09-12 00:30:24,651 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-09-12 00:30:24,652 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-09-12 00:30:25,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-09-12 00:30:25,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-12 00:30:26,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-12 00:30:26,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-12 00:30:26,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-12 00:30:26,880 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-12 00:30:26,929 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-09-12 00:30:26,929 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-12 00:30:26,931 [ scc.git] DEBUG Check current status 2025-09-12 00:30:26,931 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-12 00:30:26,934 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-09-12 00:30:26,934 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-12 00:30:26,975 [ scc.config] DEBUG Found remote.origin.url 2025-09-12 00:30:27,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-09-12 00:30:27,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-12 00:30:28,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-12 00:30:28,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-12 00:30:29,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-12 00:30:29,119 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-12 00:30:29,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-12 00:30:29,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-09-12 00:30:29,161 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-12 00:30:29,163 [ scc.git] DEBUG Check current status 2025-09-12 00:30:29,163 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-12 00:30:29,166 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-09-12 00:30:29,166 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-12 00:30:29,208 [ scc.config] DEBUG Found remote.origin.url 2025-09-12 00:30:29,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-09-12 00:30:30,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-12 00:30:30,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-12 00:30:30,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-12 00:30:31,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-12 00:30:31,292 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-12 00:30:31,332 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-12 00:30:31,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-09-12 00:30:31,333 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-12 00:30:31,335 [ scc.git] DEBUG Check current status 2025-09-12 00:30:31,335 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-12 00:30:31,338 [ scc.git] DEBUG edf7ff58 Bump version: 5.21.1 → 5.21.2.dev0 2025-09-12 00:30:31,338 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-12 00:30:31,381 [ scc.config] DEBUG Found remote.origin.url 2025-09-12 00:30:31,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-09-12 00:30:32,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-12 00:30:32,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-12 00:30:33,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-12 00:30:33,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-12 00:30:33,514 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-12 00:30:33,554 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-12 00:30:33,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-09-12 00:30:33,555 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-12 00:30:33,557 [ scc.git] DEBUG Check current status 2025-09-12 00:30:33,557 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-12 00:30:33,560 [ scc.git] DEBUG 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-09-12 00:30:33,560 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-12 00:30:33,601 [ scc.config] DEBUG Found remote.origin.url 2025-09-12 00:30:33,601 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-09-12 00:30:34,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-09-12 00:30:34,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-12 00:30:34,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-12 00:30:35,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-12 00:30:35,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-12 00:30:35,842 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-12 00:30:35,883 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-12 00:30:35,883 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-09-12 00:30:35,883 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-12 00:30:35,886 [ scc.git] DEBUG Check current status 2025-09-12 00:30:35,886 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-12 00:30:35,889 [ scc.git] DEBUG 2a7c4d2e3 Bump version: 5.29.2 → 5.29.3.dev0 2025-09-12 00:30:35,889 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-12 00:30:35,929 [ scc.config] DEBUG Found remote.origin.url 2025-09-12 00:30:36,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-09-12 00:30:36,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-12 00:30:37,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-12 00:30:37,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-12 00:30:38,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-12 00:30:38,123 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-12 00:30:38,163 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-12 00:30:38,164 [ scc.git] DEBUG Resetting... 2025-09-12 00:30:38,164 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-09-12 00:30:38,168 [ scc.git] DEBUG HEAD is now at 92f260e merge master -Dorg -Snone 2025-09-12 00:30:38,169 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-09-12 00:30:38,232 [ scc.git] DEBUG Submodule path 'omero-py': checked out '70b6235a7283f1729225c4c3c24f01dfe97ae12b' 2025-09-12 00:30:38,242 [ scc.git] DEBUG Check current status 2025-09-12 00:30:38,243 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-12 00:30:38,245 [ scc.git] DEBUG 92f260e merge master -Dorg -Snone 2025-09-12 00:30:38,245 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-12 00:30:38,286 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-09-12 00:30:38,289 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-09-12 00:30:38,294 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-09-12 00:30:38,299 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-09-12 00:30:38,303 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-09-12 00:30:38,304 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-09-12 00:30:38,304 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-09-12 00:30:38,304 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-09-12 00:30:38,304 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-09-12 00:30:38,304 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-09-12 00:30:38,304 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-09-12 00:30:38,304 [ scc.repo] DEBUG ## PRs found: 2025-09-12 00:30:38,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-09-12 00:30:38,545 [ scc.repo] DEBUG ## Branches found: 2025-09-12 00:30:38,545 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:30:38,545 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:30:38,547 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-12 00:30:38,549 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-12 00:30:38,549 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-12 00:30:38,552 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-12 00:30:38,555 [ scc.git] DEBUG Already up to date. 2025-09-12 00:30:38,555 [ scc.git] DEBUG ## Unique users: [] 2025-09-12 00:30:38,555 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:30:38,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:30:38,557 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-12 00:30:38,600 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:30:38,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:30:38,602 [ scc.repo] DEBUG ## PRs found: 2025-09-12 00:30:39,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-09-12 00:30:39,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/26 HTTP/1.1" 200 None 2025-09-12 00:30:39,611 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-12 00:30:40,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a HTTP/1.1" 200 None 2025-09-12 00:30:40,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:30:41,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-12 00:30:41,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a HTTP/1.1" 200 None 2025-09-12 00:30:42,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/38aa63d7d4014725060e4ecaa159922370485c5a?per_page=1 HTTP/1.1" 200 2 2025-09-12 00:30:42,367 [ scc.repo] DEBUG - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-12 00:30:42,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-09-12 00:30:43,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-09-12 00:30:43,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-09-12 00:30:44,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:30:44,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-09-12 00:30:45,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-09-12 00:30:45,257 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-09-12 00:30:45,257 [ scc.repo] DEBUG ## Branches found: 2025-09-12 00:30:45,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-09-12 00:30:45,257 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:30:45,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:30:45,260 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-12 00:30:45,262 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-12 00:30:45,263 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-12 00:30:45,266 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-12 00:30:45,269 [ scc.git] DEBUG Already up to date. 2025-09-12 00:30:45,269 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-09-12 00:30:45,575 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-09-12 00:30:45,575 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-09-12 00:30:45,579 [ scc.git] DEBUG Calling 'git fetch origin pull/26/head' 2025-09-12 00:30:45,867 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-09-12 00:30:45,867 [ scc.git] DEBUG * branch refs/pull/26/head -> FETCH_HEAD 2025-09-12 00:30:45,871 [ scc.git] DEBUG ## Unique users: [] 2025-09-12 00:30:45,871 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:30:45,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:30:45,873 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-09-12 00:30:45,877 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:30:45,879 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-09-12 00:30:45,892 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-09-12 00:30:45,892 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-09-12 00:30:45,892 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-09-12 00:30:45,892 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-09-12 00:30:45,892 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-09-12 00:30:45,892 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-09-12 00:30:45,892 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-09-12 00:30:45,892 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-09-12 00:30:45,892 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-09-12 00:30:45,894 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:30:45,898 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-09-12 00:30:45,898 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-09-12 00:30:45,898 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-09-12 00:30:45,898 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-09-12 00:30:45,898 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-09-12 00:30:45,898 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-09-12 00:30:45,898 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-09-12 00:30:45,898 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-09-12 00:30:45,898 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-09-12 00:30:45,899 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-09-12 00:30:46,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:30:46,048 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38aa63d7d4014725060e4ecaa159922370485c5a' 2025-09-12 00:30:46,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:30:46,054 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 26 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38aa63d7d4014725060e4ecaa159922370485c5a' 2025-09-12 00:30:46,063 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:30:46,066 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-12 00:30:46,066 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-12 00:30:46,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:30:46,440 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-12 00:30:46,480 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:30:46,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:30:46,482 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-12 00:30:46,522 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-12 00:30:46,526 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f06b9704fd0> has no local changes 2025-09-12 00:30:46,526 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-python-superbuild-push#517 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/517/)' 2025-09-12 00:30:46,533 [ scc.git] DEBUG [detached HEAD 02cae41] merge master -Dorg -Ssuccess-only 2025-09-12 00:30:46,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-12 00:30:46,533 [ scc.repo] DEBUG ## PRs found: 2025-09-12 00:30:46,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-09-12 00:30:47,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/85 HTTP/1.1" 200 None 2025-09-12 00:30:47,494 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-12 00:30:48,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1ff3bb78434dee715c2029077581cdbbfdaedce8 HTTP/1.1" 200 None 2025-09-12 00:30:48,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1ff3bb78434dee715c2029077581cdbbfdaedce8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:30:49,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1ff3bb78434dee715c2029077581cdbbfdaedce8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-12 00:30:49,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1ff3bb78434dee715c2029077581cdbbfdaedce8 HTTP/1.1" 200 None 2025-09-12 00:30:50,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1ff3bb78434dee715c2029077581cdbbfdaedce8?per_page=1 HTTP/1.1" 200 2 2025-09-12 00:30:50,138 [ scc.repo] DEBUG - PR 85 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-12 00:30:50,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-09-12 00:30:51,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-09-12 00:30:51,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-09-12 00:30:52,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-09-12 00:30:52,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-09-12 00:30:53,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:30:53,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-09-12 00:30:53,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-09-12 00:30:53,952 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-09-12 00:30:54,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-09-12 00:30:54,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-09-12 00:30:55,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-09-12 00:30:55,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-09-12 00:30:55,849 [ scc.repo] DEBUG ## Branches found: 2025-09-12 00:30:55,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-09-12 00:30:55,849 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:30:55,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:30:55,851 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-12 00:30:55,854 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-12 00:30:55,854 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-12 00:30:55,857 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-12 00:30:55,860 [ scc.git] DEBUG Already up to date. 2025-09-12 00:30:55,860 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-09-12 00:30:56,187 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-09-12 00:30:56,187 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-09-12 00:30:56,191 [ scc.git] DEBUG Calling 'git fetch origin pull/85/head' 2025-09-12 00:30:56,475 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-09-12 00:30:56,475 [ scc.git] DEBUG * branch refs/pull/85/head -> FETCH_HEAD 2025-09-12 00:30:56,479 [ scc.git] DEBUG ## Unique users: [] 2025-09-12 00:30:56,480 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:30:56,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:30:56,482 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-09-12 00:30:56,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:30:56,488 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-09-12 00:30:56,497 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-09-12 00:30:56,498 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:30:56,501 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-09-12 00:30:56,501 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-09-12 00:30:56,501 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-09-12 00:30:56,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:30:56,639 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1ff3bb78434dee715c2029077581cdbbfdaedce8' 2025-09-12 00:30:56,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:30:56,644 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 85 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1ff3bb78434dee715c2029077581cdbbfdaedce8' 2025-09-12 00:30:56,654 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:30:56,657 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-12 00:30:56,657 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-12 00:30:57,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:30:57,054 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-12 00:30:57,093 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:30:57,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:30:57,096 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-12 00:30:57,134 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-12 00:30:57,138 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f06b91b5b10> has no local changes 2025-09-12 00:30:57,138 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' - PR 85 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-python-superbuild-push#517 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/517/)' 2025-09-12 00:30:57,146 [ scc.git] DEBUG [detached HEAD 6d63ad1] merge master -Dorg -Ssuccess-only 2025-09-12 00:30:57,146 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-12 00:30:57,146 [ scc.repo] DEBUG ## PRs found: 2025-09-12 00:30:57,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-09-12 00:30:58,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None 2025-09-12 00:30:58,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None 2025-09-12 00:30:59,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2025-09-12 00:30:59,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-09-12 00:31:00,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None 2025-09-12 00:31:00,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-09-12 00:31:01,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-09-12 00:31:01,112 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-09-12 00:31:01,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-09-12 00:31:02,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-09-12 00:31:02,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-09-12 00:31:03,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:03,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-09-12 00:31:03,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 2 2025-09-12 00:31:03,884 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-09-12 00:31:04,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-09-12 00:31:04,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-09-12 00:31:05,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-09-12 00:31:05,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:06,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-12 00:31:06,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-09-12 00:31:07,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-09-12 00:31:07,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-09-12 00:31:08,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:08,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-09-12 00:31:09,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-09-12 00:31:09,231 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-09-12 00:31:09,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-09-12 00:31:10,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-09-12 00:31:10,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-09-12 00:31:11,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:11,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-09-12 00:31:12,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-09-12 00:31:12,118 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-09-12 00:31:12,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-09-12 00:31:13,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-09-12 00:31:13,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-09-12 00:31:14,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-09-12 00:31:14,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-09-12 00:31:15,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:15,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-09-12 00:31:16,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-09-12 00:31:16,010 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-09-12 00:31:16,010 [ scc.repo] DEBUG ## Branches found: 2025-09-12 00:31:16,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-09-12 00:31:16,010 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:31:16,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:31:16,013 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-12 00:31:16,016 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-12 00:31:16,016 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-12 00:31:16,019 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-12 00:31:16,030 [ scc.git] DEBUG Updating 70b6235a..edf7ff58 2025-09-12 00:31:16,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/472 HTTP/1.1" 200 None 2025-09-12 00:31:16,687 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-09-12 00:31:17,008 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-09-12 00:31:17,008 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-09-12 00:31:17,012 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-09-12 00:31:17,296 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-09-12 00:31:17,296 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-09-12 00:31:17,300 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-09-12 00:31:17,598 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-09-12 00:31:17,598 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-09-12 00:31:17,602 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-09-12 00:31:17,893 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-09-12 00:31:17,893 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-09-12 00:31:17,898 [ scc.git] DEBUG ## Unique users: [] 2025-09-12 00:31:17,898 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:31:17,898 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:31:17,900 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-09-12 00:31:17,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:31:17,915 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-09-12 00:31:17,939 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-09-12 00:31:17,940 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-09-12 00:31:17,941 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:31:17,945 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-09-12 00:31:17,945 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-09-12 00:31:17,945 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-09-12 00:31:18,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:31:18,127 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-09-12 00:31:18,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:31:18,143 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-09-12 00:31:18,164 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:31:18,167 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-09-12 00:31:18,167 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-09-12 00:31:18,167 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-09-12 00:31:18,167 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-09-12 00:31:18,167 [ scc.git] DEBUG create mode 100644 connect.py 2025-09-12 00:31:18,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:31:18,561 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-09-12 00:31:18,574 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:31:18,576 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-09-12 00:31:18,599 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-09-12 00:31:18,600 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:31:18,604 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-09-12 00:31:18,604 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-09-12 00:31:18,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:31:18,947 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-09-12 00:31:18,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:31:18,963 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-09-12 00:31:18,997 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-09-12 00:31:18,998 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:31:19,005 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-09-12 00:31:19,005 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-09-12 00:31:19,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:31:19,351 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-12 00:31:19,391 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:31:19,391 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:31:19,393 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-12 00:31:19,434 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-12 00:31:19,441 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f06bbac3dd0> has no local changes 2025-09-12 00:31:19,441 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Updating 70b6235a..edf7ff58 Previously merged: - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' Generated by OMERO-python-superbuild-push#517 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/517/)' 2025-09-12 00:31:19,448 [ scc.git] DEBUG [detached HEAD 16ca9c1b] merge master -Dorg -Ssuccess-only 2025-09-12 00:31:19,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-12 00:31:19,448 [ scc.git] INFO Overriding base-branch from master to develop 2025-09-12 00:31:19,449 [ scc.repo] DEBUG ## PRs found: 2025-09-12 00:31:19,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-09-12 00:31:20,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-09-12 00:31:20,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-09-12 00:31:21,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-09-12 00:31:21,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:22,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-12 00:31:22,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-09-12 00:31:23,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-09-12 00:31:23,288 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-09-12 00:31:23,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-09-12 00:31:24,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-09-12 00:31:24,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-09-12 00:31:25,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:25,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-09-12 00:31:26,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-09-12 00:31:26,053 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-09-12 00:31:26,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-09-12 00:31:27,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-09-12 00:31:27,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-09-12 00:31:28,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-09-12 00:31:28,066 [ scc.repo] DEBUG ## Branches found: 2025-09-12 00:31:28,066 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-09-12 00:31:28,066 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:31:28,066 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:31:28,068 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-09-12 00:31:28,071 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-12 00:31:28,071 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-09-12 00:31:28,074 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-09-12 00:31:28,078 [ scc.git] DEBUG Already up to date. 2025-09-12 00:31:28,078 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-09-12 00:31:28,372 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-09-12 00:31:28,372 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-09-12 00:31:28,376 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-09-12 00:31:28,662 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-09-12 00:31:28,662 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-09-12 00:31:28,666 [ scc.git] DEBUG ## Unique users: [] 2025-09-12 00:31:28,666 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:31:28,666 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:31:28,668 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-09-12 00:31:28,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:31:28,676 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-09-12 00:31:28,686 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-09-12 00:31:28,687 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-12 00:31:28,687 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-12 00:31:28,689 [ scc.git] DEBUG Calling 'git reset --hard 03b9116196e1a799dd18a666559613d912be01a5' 2025-09-12 00:31:28,694 [ scc.git] DEBUG HEAD is now at 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-09-12 00:31:28,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:31:28,845 [ scc.git] DEBUG Calling 'git merge-base 03b9116196e1a799dd18a666559613d912be01a5 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-09-12 00:31:28,850 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..03b9116196e1a799dd18a666559613d912be01a5' 2025-09-12 00:31:28,855 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#517](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/517/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/517/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-09-12 00:31:28,858 [ scc.config] DEBUG Found github.token 2025-09-12 00:31:28,858 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-09-12 00:31:28,858 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-09-12 00:31:28,863 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:31:28,865 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-09-12 00:31:28,875 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:31:28,878 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-09-12 00:31:28,878 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-09-12 00:31:29,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:31:29,241 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-12 00:31:29,283 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:31:29,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:31:29,285 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-12 00:31:29,325 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-12 00:31:29,329 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f06b9166990> has no local changes 2025-09-12 00:31:29,329 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#517 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/517/)' 2025-09-12 00:31:29,335 [ scc.git] DEBUG [detached HEAD 7d5d0ba] merge master -Dorg -Ssuccess-only 2025-09-12 00:31:29,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-12 00:31:29,336 [ scc.repo] DEBUG ## PRs found: 2025-09-12 00:31:29,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-09-12 00:31:30,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/629 HTTP/1.1" 200 None 2025-09-12 00:31:30,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/628 HTTP/1.1" 200 None 2025-09-12 00:31:31,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-09-12 00:31:32,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:32,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-12 00:31:33,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-09-12 00:31:33,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b8c7989c9900270d7cf27523f2649bbb903c7a60?per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:33,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-09-12 00:31:34,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/status HTTP/1.1" 200 None 2025-09-12 00:31:34,354 [ scc.repo] DEBUG - PR 628 jburel 'Add protocol required since Django4' 2025-09-12 00:31:34,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None 2025-09-12 00:31:35,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-09-12 00:31:35,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:36,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-12 00:31:36,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-09-12 00:31:37,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:37,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-09-12 00:31:38,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None 2025-09-12 00:31:38,189 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-09-12 00:31:38,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-09-12 00:31:39,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-09-12 00:31:39,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f3c42d33bf789591b0515c28a15dceab6b82f0c6 HTTP/1.1" 200 None 2025-09-12 00:31:40,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f3c42d33bf789591b0515c28a15dceab6b82f0c6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:40,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f3c42d33bf789591b0515c28a15dceab6b82f0c6/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-12 00:31:41,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f3c42d33bf789591b0515c28a15dceab6b82f0c6 HTTP/1.1" 200 None 2025-09-12 00:31:41,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/f3c42d33bf789591b0515c28a15dceab6b82f0c6?per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:42,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f3c42d33bf789591b0515c28a15dceab6b82f0c6 HTTP/1.1" 200 None 2025-09-12 00:31:42,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f3c42d33bf789591b0515c28a15dceab6b82f0c6/status HTTP/1.1" 200 None 2025-09-12 00:31:42,512 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-09-12 00:31:42,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-09-12 00:31:43,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-09-12 00:31:43,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-09-12 00:31:44,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:45,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-12 00:31:45,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-09-12 00:31:45,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:46,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-09-12 00:31:46,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-09-12 00:31:46,974 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-09-12 00:31:47,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-09-12 00:31:47,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-09-12 00:31:48,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-09-12 00:31:48,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:49,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-12 00:31:49,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-09-12 00:31:50,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:50,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-09-12 00:31:51,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-09-12 00:31:51,244 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-09-12 00:31:51,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-09-12 00:31:52,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-09-12 00:31:52,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:53,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-12 00:31:53,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-09-12 00:31:54,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:54,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-09-12 00:31:54,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-09-12 00:31:54,998 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-09-12 00:31:55,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-09-12 00:31:55,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-09-12 00:31:56,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-09-12 00:31:56,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:57,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-12 00:31:57,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-09-12 00:31:58,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-09-12 00:31:58,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-09-12 00:31:59,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-09-12 00:31:59,356 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-09-12 00:31:59,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-09-12 00:32:00,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-09-12 00:32:00,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-09-12 00:32:01,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:32:01,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-12 00:32:02,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-09-12 00:32:02,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-09-12 00:32:03,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-09-12 00:32:03,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-09-12 00:32:03,663 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-09-12 00:32:04,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-09-12 00:32:04,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-09-12 00:32:05,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-09-12 00:32:05,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-09-12 00:32:06,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-09-12 00:32:06,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:32:07,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-09-12 00:32:07,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-09-12 00:32:07,444 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-09-12 00:32:07,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-09-12 00:32:08,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-09-12 00:32:08,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-09-12 00:32:09,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:32:09,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-09-12 00:32:10,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-09-12 00:32:10,312 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-09-12 00:32:10,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-09-12 00:32:11,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-09-12 00:32:11,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-09-12 00:32:12,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-12 00:32:12,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-09-12 00:32:13,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06b0073db19eeccb9698860f75639084ad1b1200?per_page=1 HTTP/1.1" 200 2 2025-09-12 00:32:13,173 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler' 2025-09-12 00:32:13,173 [ scc.repo] DEBUG ## Branches found: 2025-09-12 00:32:13,174 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-09-12 00:32:13,174 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:32:13,174 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:32:13,176 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-12 00:32:13,180 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-12 00:32:13,180 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-12 00:32:13,183 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-12 00:32:13,188 [ scc.git] DEBUG Already up to date. 2025-09-12 00:32:13,188 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head' 2025-09-12 00:32:13,503 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-12 00:32:13,503 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD 2025-09-12 00:32:13,507 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-09-12 00:32:13,810 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-12 00:32:13,810 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-09-12 00:32:13,815 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-09-12 00:32:14,108 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-12 00:32:14,108 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-09-12 00:32:14,112 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-09-12 00:32:14,396 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-12 00:32:14,396 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-09-12 00:32:14,401 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-09-12 00:32:14,685 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-12 00:32:14,685 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-09-12 00:32:14,690 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-09-12 00:32:15,000 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-12 00:32:15,000 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-09-12 00:32:15,004 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-09-12 00:32:15,316 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-12 00:32:15,316 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-09-12 00:32:15,321 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-09-12 00:32:15,610 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-12 00:32:15,610 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-09-12 00:32:15,614 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-09-12 00:32:16,191 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-12 00:32:16,191 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-09-12 00:32:16,194 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head' 2025-09-12 00:32:16,488 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-12 00:32:16,488 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD 2025-09-12 00:32:16,492 [ scc.git] DEBUG Calling 'git fetch origin pull/628/head' 2025-09-12 00:32:16,797 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-12 00:32:16,797 [ scc.git] DEBUG * branch refs/pull/628/head -> FETCH_HEAD 2025-09-12 00:32:16,802 [ scc.git] DEBUG ## Unique users: [] 2025-09-12 00:32:16,802 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:32:16,802 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:32:16,804 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06b0073db19eeccb9698860f75639084ad1b1200' 2025-09-12 00:32:16,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:32:16,816 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 06b0073db19eeccb9698860f75639084ad1b1200' 2025-09-12 00:32:16,836 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:32:16,841 [ scc.git] DEBUG omeroweb/templates/nginx-development.conf.template | 2 +- 2025-09-12 00:32:16,841 [ scc.git] DEBUG omeroweb/templates/nginx-location.conf.template | 3 ++- 2025-09-12 00:32:16,841 [ scc.git] DEBUG omeroweb/templates/nginx.conf.template | 2 +- 2025-09-12 00:32:16,841 [ scc.git] DEBUG test/unit/reference_templates/nginx-development-withoptions.conf | 2 +- 2025-09-12 00:32:16,841 [ scc.git] DEBUG test/unit/reference_templates/nginx-development.conf | 2 +- 2025-09-12 00:32:16,841 [ scc.git] DEBUG test/unit/reference_templates/nginx-location-withoptions.conf | 3 ++- 2025-09-12 00:32:16,841 [ scc.git] DEBUG test/unit/reference_templates/nginx-location.conf | 3 ++- 2025-09-12 00:32:16,841 [ scc.git] DEBUG test/unit/reference_templates/nginx-withoptions.conf | 2 +- 2025-09-12 00:32:16,841 [ scc.git] DEBUG test/unit/reference_templates/nginx.conf | 2 +- 2025-09-12 00:32:16,841 [ scc.git] DEBUG test/unit/test_web.py | 1 + 2025-09-12 00:32:16,842 [ scc.git] DEBUG 10 files changed, 13 insertions(+), 9 deletions(-) 2025-09-12 00:32:17,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:32:17,010 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-09-12 00:32:17,020 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:32:17,022 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-09-12 00:32:17,043 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-09-12 00:32:17,043 [ scc.git] DEBUG Auto-merging setup.py 2025-09-12 00:32:17,045 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:32:17,048 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-09-12 00:32:17,048 [ scc.git] DEBUG setup.py | 1 + 2025-09-12 00:32:17,048 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-09-12 00:32:17,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:32:17,416 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-09-12 00:32:17,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:32:17,427 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-09-12 00:32:17,451 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-09-12 00:32:17,451 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-09-12 00:32:17,452 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:32:17,457 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-09-12 00:32:17,457 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-09-12 00:32:17,457 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-09-12 00:32:17,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:32:17,811 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-09-12 00:32:17,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:32:17,823 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-09-12 00:32:17,846 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:32:17,851 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-09-12 00:32:17,851 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-12 00:32:18,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:32:18,211 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-09-12 00:32:18,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:32:18,223 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-09-12 00:32:18,245 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:32:18,249 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-09-12 00:32:18,249 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-09-12 00:32:18,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:32:18,648 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-09-12 00:32:18,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:32:18,659 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-09-12 00:32:18,682 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:32:18,687 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-09-12 00:32:18,687 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-09-12 00:32:18,688 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-09-12 00:32:18,688 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-09-12 00:32:18,688 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-09-12 00:32:18,688 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-09-12 00:32:18,688 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-09-12 00:32:18,688 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-09-12 00:32:18,688 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-09-12 00:32:18,688 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-09-12 00:32:18,688 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-09-12 00:32:18,688 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-09-12 00:32:19,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:32:19,073 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-09-12 00:32:19,082 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:32:19,085 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-09-12 00:32:19,115 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-09-12 00:32:19,118 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:32:19,125 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-09-12 00:32:19,125 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-09-12 00:32:19,125 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-09-12 00:32:19,125 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-09-12 00:32:19,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:32:19,474 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-09-12 00:32:19,483 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:32:19,486 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-09-12 00:32:19,509 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:32:19,513 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-09-12 00:32:19,513 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-09-12 00:32:19,513 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-09-12 00:32:19,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:32:19,881 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f3c42d33bf789591b0515c28a15dceab6b82f0c6' 2025-09-12 00:32:19,891 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:32:19,893 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) f3c42d33bf789591b0515c28a15dceab6b82f0c6' 2025-09-12 00:32:19,922 [ scc.git] DEBUG Auto-merging omeroweb/webclient/static/webclient/css/dusty.css 2025-09-12 00:32:19,924 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:32:19,930 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 2 +- 2025-09-12 00:32:19,930 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 44 +++++++++++++++++++++- 2025-09-12 00:32:19,930 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 ++++++++++----- 2025-09-12 00:32:19,930 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 + 2025-09-12 00:32:19,930 [ scc.git] DEBUG 4 files changed, 67 insertions(+), 12 deletions(-) 2025-09-12 00:32:20,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:32:20,269 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-09-12 00:32:20,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:32:20,281 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-09-12 00:32:20,304 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-09-12 00:32:20,306 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:32:20,310 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++----- 2025-09-12 00:32:20,310 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-) 2025-09-12 00:32:20,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:32:20,666 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-09-12 00:32:20,676 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:32:20,678 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 628 (Add protocol required since Django4) b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-09-12 00:32:20,701 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-09-12 00:32:20,703 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-12 00:32:20,707 [ scc.git] DEBUG omeroweb/settings.py | 4 ++-- 2025-09-12 00:32:20,707 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2025-09-12 00:32:21,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:32:21,060 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-12 00:32:21,104 [ scc.git] DEBUG Get sha1 of %s 2025-09-12 00:32:21,104 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-12 00:32:21,106 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-12 00:32:21,149 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-12 00:32:21,157 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f06b91287d0> has no local changes 2025-09-12 00:32:21,157 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' Generated by OMERO-python-superbuild-push#517 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/517/)' 2025-09-12 00:32:21,166 [ scc.git] DEBUG [detached HEAD 189309123] merge master -Dorg -Ssuccess-only 2025-09-12 00:32:21,167 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-12 00:32:21,167 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-12 00:32:21,218 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-09-12 00:32:21,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:32:21,467 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-09-12 00:32:21,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:32:21,863 [ scc.config] DEBUG Found submodule.omero-py.url 2025-09-12 00:32:22,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:32:22,269 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-09-12 00:32:22,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:32:22,671 [ scc.config] DEBUG Found submodule.omero-web.url 2025-09-12 00:32:23,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-12 00:32:23,096 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-12 00:32:23,124 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f06b92525d0> has local changes 2025-09-12 00:32:23,124 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' - PR 85 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Updating 70b6235a..edf7ff58 Previously merged: - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' Generated by OMERO-python-superbuild-push#517 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/517/)' 2025-09-12 00:32:23,133 [ scc.git] DEBUG [detached HEAD c1130f3] merge master -Dorg -Ssuccess-only 2025-09-12 00:32:23,133 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-09-12 00:32:23,133 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-09-12 00:32:23,133 [ scc.merge] INFO Already up to date. 2025-09-12 00:32:23,133 [ scc.merge] INFO 2025-09-12 00:32:23,133 [ scc.merge] INFO 2025-09-12 00:32:23,133 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-09-12 00:32:23,133 [ scc.merge] INFO Already up to date. 2025-09-12 00:32:23,133 [ scc.merge] INFO 2025-09-12 00:32:23,133 [ scc.merge] INFO Merged PRs: 2025-09-12 00:32:23,133 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-09-12 00:32:23,133 [ scc.merge] INFO - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-12 00:32:23,133 [ scc.merge] INFO 2025-09-12 00:32:23,133 [ scc.merge] INFO Repository: ome/omero-marshal 2025-09-12 00:32:23,133 [ scc.merge] INFO Excluded PRs: 2025-09-12 00:32:23,133 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-09-12 00:32:23,133 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-09-12 00:32:23,133 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-09-12 00:32:23,133 [ scc.merge] INFO Already up to date. 2025-09-12 00:32:23,133 [ scc.merge] INFO 2025-09-12 00:32:23,133 [ scc.merge] INFO Merged PRs: 2025-09-12 00:32:23,133 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-09-12 00:32:23,133 [ scc.merge] INFO - PR 85 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-12 00:32:23,134 [ scc.merge] INFO 2025-09-12 00:32:23,134 [ scc.merge] INFO Repository: ome/omero-py 2025-09-12 00:32:23,134 [ scc.merge] INFO Excluded PRs: 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric) 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-09-12 00:32:23,134 [ scc.merge] INFO Updating 70b6235a..edf7ff58 2025-09-12 00:32:23,134 [ scc.merge] INFO Previously merged: 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' 2025-09-12 00:32:23,134 [ scc.merge] INFO 2025-09-12 00:32:23,134 [ scc.merge] INFO Merged PRs: 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-09-12 00:32:23,134 [ scc.merge] INFO 2025-09-12 00:32:23,134 [ scc.merge] INFO Repository: ome/omero-scripts 2025-09-12 00:32:23,134 [ scc.merge] INFO Excluded PRs: 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-09-12 00:32:23,134 [ scc.merge] INFO Already up to date. 2025-09-12 00:32:23,134 [ scc.merge] INFO 2025-09-12 00:32:23,134 [ scc.merge] INFO Merged PRs: 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-09-12 00:32:23,134 [ scc.merge] INFO 2025-09-12 00:32:23,134 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-09-12 00:32:23,134 [ scc.merge] INFO 2025-09-12 00:32:23,134 [ scc.merge] INFO Repository: ome/omero-web 2025-09-12 00:32:23,134 [ scc.merge] INFO Excluded PRs: 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-09-12 00:32:23,134 [ scc.merge] INFO Already up to date. 2025-09-12 00:32:23,134 [ scc.merge] INFO 2025-09-12 00:32:23,134 [ scc.merge] INFO Merged PRs: 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' 2025-09-12 00:32:23,134 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-09-12 00:32:23,135 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-09-12 00:32:23,135 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-09-12 00:32:23,135 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-09-12 00:32:23,135 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-09-12 00:32:23,135 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-09-12 00:32:23,135 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-09-12 00:32:23,135 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-09-12 00:32:23,135 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-09-12 00:32:23,135 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4' 2025-09-12 00:32:23,135 [ scc.merge] INFO 2025-09-12 00:32:23,135 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-09-12 00:32:23,135 [ scc.git] DEBUG Calling 'git remote' 2025-09-12 00:32:23,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-09-12 00:32:23,137 [ scc.git] DEBUG Calling 'git remote' 2025-09-12 00:32:23,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-12 00:32:23,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-09-12 00:32:23,139 [ scc.git] DEBUG Calling 'git remote' 2025-09-12 00:32:23,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-12 00:32:23,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-09-12 00:32:23,142 [ scc.git] DEBUG Calling 'git remote' 2025-09-12 00:32:23,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-12 00:32:23,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-09-12 00:32:23,144 [ scc.git] DEBUG Calling 'git remote' 2025-09-12 00:32:23,146 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-12 00:32:23,146 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-09-12 00:32:23,147 [ scc.git] DEBUG Calling 'git remote' 2025-09-12 00:32:23,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 70b6235a nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 03b9116 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 2a7c4d2e3 nothing to commit, working tree clean HEAD detached from 8985140 nothing to commit, working tree clean 2025-09-12 00:32:51,372 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS