Skipping 123 KB..
Full Log already explicitly excluding 'omero_iviewer.__pycache__' via
01:02:13 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
01:02:13 you can try to use `exclude_package_data`, or `include-package-data=False` in
01:02:13 combination with a more fine grained `package-data` configuration.
01:02:13
01:02:13 You can read more about "package data files" on setuptools documentation page:
01:02:13
01:02:13 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
01:02:13
01:02:13
01:02:13 [^1]: For Python, any directory (with suitable naming) can be imported,
01:02:13 even if it does not contain any `.py` files.
01:02:13 On the other hand, currently there is no concept of package data
01:02:13 directory, all directories are treated like packages.
01:02:13 ********************************************************************************
01:02:13
01:02:13 !!
01:02:13 check.warn(importable)
01:02:13 /tmp/build-env-98vtcr1r/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer' is absent from the `packages` configuration.
01:02:13 !!
01:02:13
01:02:13 ********************************************************************************
01:02:13 ############################
01:02:13 # Package would be ignored #
01:02:13 ############################
01:02:13 Python recognizes 'omero_iviewer.static.omero_iviewer' as an importable package[^1],
01:02:13 but it is absent from setuptools' `packages` configuration.
01:02:13
01:02:13 This leads to an ambiguous overall configuration. If you want to distribute this
01:02:13 package, please make sure that 'omero_iviewer.static.omero_iviewer' is explicitly added
01:02:13 to the `packages` configuration field.
01:02:13
01:02:13 Alternatively, you can also rely on setuptools' discovery methods
01:02:13 (for example by using `find_namespace_packages(...)`/`find_namespace:`
01:02:13 instead of `find_packages(...)`/`find:`).
01:02:13
01:02:13 You can read more about "package discovery" on setuptools documentation page:
01:02:13
01:02:13 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
01:02:13
01:02:13 If you don't want 'omero_iviewer.static.omero_iviewer' to be distributed and are
01:02:13 already explicitly excluding 'omero_iviewer.static.omero_iviewer' via
01:02:13 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
01:02:13 you can try to use `exclude_package_data`, or `include-package-data=False` in
01:02:13 combination with a more fine grained `package-data` configuration.
01:02:13
01:02:13 You can read more about "package data files" on setuptools documentation page:
01:02:13
01:02:13 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
01:02:13
01:02:13
01:02:13 [^1]: For Python, any directory (with suitable naming) can be imported,
01:02:13 even if it does not contain any `.py` files.
01:02:13 On the other hand, currently there is no concept of package data
01:02:13 directory, all directories are treated like packages.
01:02:13 ********************************************************************************
01:02:13
01:02:13 !!
01:02:13 check.warn(importable)
01:02:13 /tmp/build-env-98vtcr1r/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer.css' is absent from the `packages` configuration.
01:02:13 !!
01:02:13
01:02:13 ********************************************************************************
01:02:13 ############################
01:02:13 # Package would be ignored #
01:02:13 ############################
01:02:13 Python recognizes 'omero_iviewer.static.omero_iviewer.css' as an importable package[^1],
01:02:13 but it is absent from setuptools' `packages` configuration.
01:02:13
01:02:13 This leads to an ambiguous overall configuration. If you want to distribute this
01:02:13 package, please make sure that 'omero_iviewer.static.omero_iviewer.css' is explicitly added
01:02:13 to the `packages` configuration field.
01:02:13
01:02:13 Alternatively, you can also rely on setuptools' discovery methods
01:02:13 (for example by using `find_namespace_packages(...)`/`find_namespace:`
01:02:13 instead of `find_packages(...)`/`find:`).
01:02:13
01:02:13 You can read more about "package discovery" on setuptools documentation page:
01:02:13
01:02:13 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
01:02:13
01:02:13 If you don't want 'omero_iviewer.static.omero_iviewer.css' to be distributed and are
01:02:13 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css' via
01:02:13 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
01:02:13 you can try to use `exclude_package_data`, or `include-package-data=False` in
01:02:13 combination with a more fine grained `package-data` configuration.
01:02:13
01:02:13 You can read more about "package data files" on setuptools documentation page:
01:02:13
01:02:13 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
01:02:13
01:02:13
01:02:13 [^1]: For Python, any directory (with suitable naming) can be imported,
01:02:13 even if it does not contain any `.py` files.
01:02:13 On the other hand, currently there is no concept of package data
01:02:13 directory, all directories are treated like packages.
01:02:13 ********************************************************************************
01:02:13
01:02:13 !!
01:02:13 check.warn(importable)
01:02:13 /tmp/build-env-98vtcr1r/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer.css.fonts' is absent from the `packages` configuration.
01:02:13 !!
01:02:13
01:02:13 ********************************************************************************
01:02:13 ############################
01:02:13 # Package would be ignored #
01:02:13 ############################
01:02:13 Python recognizes 'omero_iviewer.static.omero_iviewer.css.fonts' as an importable package[^1],
01:02:13 but it is absent from setuptools' `packages` configuration.
01:02:13
01:02:13 This leads to an ambiguous overall configuration. If you want to distribute this
01:02:13 package, please make sure that 'omero_iviewer.static.omero_iviewer.css.fonts' is explicitly added
01:02:13 to the `packages` configuration field.
01:02:13
01:02:13 Alternatively, you can also rely on setuptools' discovery methods
01:02:13 (for example by using `find_namespace_packages(...)`/`find_namespace:`
01:02:13 instead of `find_packages(...)`/`find:`).
01:02:13
01:02:13 You can read more about "package discovery" on setuptools documentation page:
01:02:13
01:02:13 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
01:02:13
01:02:13 If you don't want 'omero_iviewer.static.omero_iviewer.css.fonts' to be distributed and are
01:02:13 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css.fonts' via
01:02:13 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
01:02:13 you can try to use `exclude_package_data`, or `include-package-data=False` in
01:02:13 combination with a more fine grained `package-data` configuration.
01:02:13
01:02:13 You can read more about "package data files" on setuptools documentation page:
01:02:13
01:02:13 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
01:02:13
01:02:13
01:02:13 [^1]: For Python, any directory (with suitable naming) can be imported,
01:02:13 even if it does not contain any `.py` files.
01:02:13 On the other hand, currently there is no concept of package data
01:02:13 directory, all directories are treated like packages.
01:02:13 ********************************************************************************
01:02:13
01:02:13 !!
01:02:13 check.warn(importable)
01:02:13 /tmp/build-env-98vtcr1r/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer.css.images' is absent from the `packages` configuration.
01:02:13 !!
01:02:13
01:02:13 ********************************************************************************
01:02:13 ############################
01:02:13 # Package would be ignored #
01:02:13 ############################
01:02:13 Python recognizes 'omero_iviewer.static.omero_iviewer.css.images' as an importable package[^1],
01:02:13 but it is absent from setuptools' `packages` configuration.
01:02:13
01:02:13 This leads to an ambiguous overall configuration. If you want to distribute this
01:02:13 package, please make sure that 'omero_iviewer.static.omero_iviewer.css.images' is explicitly added
01:02:13 to the `packages` configuration field.
01:02:13
01:02:13 Alternatively, you can also rely on setuptools' discovery methods
01:02:13 (for example by using `find_namespace_packages(...)`/`find_namespace:`
01:02:13 instead of `find_packages(...)`/`find:`).
01:02:13
01:02:13 You can read more about "package discovery" on setuptools documentation page:
01:02:13
01:02:13 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
01:02:13
01:02:13 If you don't want 'omero_iviewer.static.omero_iviewer.css.images' to be distributed and are
01:02:13 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css.images' via
01:02:13 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
01:02:13 you can try to use `exclude_package_data`, or `include-package-data=False` in
01:02:13 combination with a more fine grained `package-data` configuration.
01:02:13
01:02:13 You can read more about "package data files" on setuptools documentation page:
01:02:13
01:02:13 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
01:02:13
01:02:13
01:02:13 [^1]: For Python, any directory (with suitable naming) can be imported,
01:02:13 even if it does not contain any `.py` files.
01:02:13 On the other hand, currently there is no concept of package data
01:02:13 directory, all directories are treated like packages.
01:02:13 ********************************************************************************
01:02:13
01:02:13 !!
01:02:13 check.warn(importable)
01:02:13 /tmp/build-env-98vtcr1r/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.templates.omero_iviewer' is absent from the `packages` configuration.
01:02:13 !!
01:02:13
01:02:13 ********************************************************************************
01:02:13 ############################
01:02:13 # Package would be ignored #
01:02:13 ############################
01:02:13 Python recognizes 'omero_iviewer.templates.omero_iviewer' as an importable package[^1],
01:02:13 but it is absent from setuptools' `packages` configuration.
01:02:13
01:02:13 This leads to an ambiguous overall configuration. If you want to distribute this
01:02:13 package, please make sure that 'omero_iviewer.templates.omero_iviewer' is explicitly added
01:02:13 to the `packages` configuration field.
01:02:13
01:02:13 Alternatively, you can also rely on setuptools' discovery methods
01:02:13 (for example by using `find_namespace_packages(...)`/`find_namespace:`
01:02:13 instead of `find_packages(...)`/`find:`).
01:02:13
01:02:13 You can read more about "package discovery" on setuptools documentation page:
01:02:13
01:02:13 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
01:02:13
01:02:13 If you don't want 'omero_iviewer.templates.omero_iviewer' to be distributed and are
01:02:13 already explicitly excluding 'omero_iviewer.templates.omero_iviewer' via
01:02:13 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
01:02:13 you can try to use `exclude_package_data`, or `include-package-data=False` in
01:02:13 combination with a more fine grained `package-data` configuration.
01:02:13
01:02:13 You can read more about "package data files" on setuptools documentation page:
01:02:13
01:02:13 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
01:02:13
01:02:13
01:02:13 [^1]: For Python, any directory (with suitable naming) can be imported,
01:02:13 even if it does not contain any `.py` files.
01:02:13 On the other hand, currently there is no concept of package data
01:02:13 directory, all directories are treated like packages.
01:02:13 ********************************************************************************
01:02:13
01:02:13 !!
01:02:13 check.warn(importable)
01:02:13 copying omero_iviewer/README.rst -> build/lib/omero_iviewer
01:02:13 creating build/lib/omero_iviewer/__pycache__
01:02:13 copying omero_iviewer/__pycache__/__init__.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
01:02:13 copying omero_iviewer/__pycache__/utils.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
01:02:13 copying omero_iviewer/__pycache__/version.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
01:02:13 creating build/lib/omero_iviewer/static/omero_iviewer
01:02:13 copying omero_iviewer/static/omero_iviewer/deps.js -> build/lib/omero_iviewer/static/omero_iviewer
01:02:13 copying omero_iviewer/static/omero_iviewer/main.js -> build/lib/omero_iviewer/static/omero_iviewer
01:02:13 copying omero_iviewer/static/omero_iviewer/openwith.js -> build/lib/omero_iviewer/static/omero_iviewer
01:02:13 copying omero_iviewer/static/omero_iviewer/vendors.js -> build/lib/omero_iviewer/static/omero_iviewer
01:02:13 copying omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> build/lib/omero_iviewer/static/omero_iviewer
01:02:13 creating build/lib/omero_iviewer/static/omero_iviewer/css
01:02:13 copying omero_iviewer/static/omero_iviewer/css/all.min.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:02:13 copying omero_iviewer/static/omero_iviewer/css/app.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:02:13 copying omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:02:13 copying omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:02:13 copying omero_iviewer/static/omero_iviewer/css/slider.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:02:13 copying omero_iviewer/static/omero_iviewer/css/spectrum.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:02:13 copying omero_iviewer/static/omero_iviewer/css/spinner.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:02:13 copying omero_iviewer/static/omero_iviewer/css/theme.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:02:13 creating build/lib/omero_iviewer/static/omero_iviewer/css/fonts
01:02:13 copying omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> build/lib/omero_iviewer/static/omero_iviewer/css/fonts
01:02:13 creating build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/collapse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/expand.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/gradient.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/label.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/line.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/link.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/mask.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/point.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/polygon.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/polyline.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/projection.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/select.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/sortable.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:02:13 creating build/lib/omero_iviewer/templates/omero_iviewer
01:02:13 copying omero_iviewer/templates/omero_iviewer/index.html -> build/lib/omero_iviewer/templates/omero_iviewer
01:02:13 installing to build/bdist.linux-x86_64/wheel
01:02:13 running install
01:02:13 running install_lib
01:02:13 creating build/bdist.linux-x86_64/wheel
01:02:13 creating build/bdist.linux-x86_64/wheel/omero_iviewer
01:02:13 copying build/lib/omero_iviewer/__init__.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:02:13 copying build/lib/omero_iviewer/apps.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:02:13 copying build/lib/omero_iviewer/iviewer_settings.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:02:13 copying build/lib/omero_iviewer/urls.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:02:13 copying build/lib/omero_iviewer/utils.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:02:13 copying build/lib/omero_iviewer/version.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:02:13 copying build/lib/omero_iviewer/views.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:02:13 copying build/lib/omero_iviewer/README.rst -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:02:13 creating build/bdist.linux-x86_64/wheel/omero_iviewer/__pycache__
01:02:13 copying build/lib/omero_iviewer/__pycache__/__init__.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
01:02:13 copying build/lib/omero_iviewer/__pycache__/utils.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
01:02:13 copying build/lib/omero_iviewer/__pycache__/version.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
01:02:13 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static
01:02:13 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/deps.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/main.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/openwith.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/vendors.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
01:02:13 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/all.min.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/app.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/slider.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/spectrum.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/spinner.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/theme.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:02:13 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css/fonts
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/fonts
01:02:13 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/expand.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/gradient.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/label.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/line.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/link.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/mask.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/point.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/polygon.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/polyline.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/projection.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/select.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sortable.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:02:13 creating build/bdist.linux-x86_64/wheel/omero_iviewer/templates
01:02:13 creating build/bdist.linux-x86_64/wheel/omero_iviewer/templates/omero_iviewer
01:02:13 copying build/lib/omero_iviewer/templates/omero_iviewer/index.html -> build/bdist.linux-x86_64/wheel/./omero_iviewer/templates/omero_iviewer
01:02:13 running install_egg_info
01:02:13 Copying omero_iviewer.egg-info to build/bdist.linux-x86_64/wheel/./omero_iviewer-0.16.0.dev0-py3.11.egg-info
01:02:13 running install_scripts
01:02:13 creating build/bdist.linux-x86_64/wheel/omero_iviewer-0.16.0.dev0.dist-info/WHEEL
01:02:13 creating '/home/omero/workspace/OMERO-web/omero-iviewer/plugin/dist/.tmp-qm5twfim/omero_iviewer-0.16.0.dev0-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
01:02:13 adding 'omero_iviewer/README.rst'
01:02:13 adding 'omero_iviewer/__init__.py'
01:02:13 adding 'omero_iviewer/apps.py'
01:02:13 adding 'omero_iviewer/iviewer_settings.py'
01:02:13 adding 'omero_iviewer/urls.py'
01:02:13 adding 'omero_iviewer/utils.py'
01:02:13 adding 'omero_iviewer/version.py'
01:02:13 adding 'omero_iviewer/views.py'
01:02:13 adding 'omero_iviewer/__pycache__/__init__.cpython-311.pyc'
01:02:13 adding 'omero_iviewer/__pycache__/utils.cpython-311.pyc'
01:02:13 adding 'omero_iviewer/__pycache__/version.cpython-311.pyc'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/deps.js'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/main.js'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/openwith.js'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/vendors.js'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/all.min.css'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/app.css'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/bootstrap.min.css'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/ol3-viewer.css'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/slider.css'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/spectrum.css'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/spinner.css'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/theme.css'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/arrow.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse-left.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse-right.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/crosshair.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/dim_locked.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/drag_handle.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_label.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_line.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_point.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/ellipse.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/expand.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/gradient.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/label.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/line.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/link.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/mask.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/point.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/polygon.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/polyline.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/projection.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/rectangle.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/select.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/sortable.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png'
01:02:13 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png'
01:02:13 adding 'omero_iviewer/templates/omero_iviewer/index.html'
01:02:13 adding 'omero_iviewer-0.16.0.dev0.dist-info/licenses/LICENSE'
01:02:13 adding 'omero_iviewer-0.16.0.dev0.dist-info/METADATA'
01:02:13 adding 'omero_iviewer-0.16.0.dev0.dist-info/WHEEL'
01:02:13 adding 'omero_iviewer-0.16.0.dev0.dist-info/top_level.txt'
01:02:13 adding 'omero_iviewer-0.16.0.dev0.dist-info/RECORD'
01:02:13 removing build/bdist.linux-x86_64/wheel
01:02:13 Successfully built omero_iviewer-0.16.0.dev0.tar.gz and omero_iviewer-0.16.0.dev0-py3-none-any.whl
01:02:13 + cd dist
01:02:13 + for x in *.tar.gz
01:02:13 + pip install -U omero_iviewer-0.16.0.dev0.tar.gz
01:02:14 Processing ./omero_iviewer-0.16.0.dev0.tar.gz
01:02:14 Preparing metadata (setup.py): started
01:02:14 Preparing metadata (setup.py): finished with status 'done'
01:02:14 Requirement already satisfied: omero-web>=5.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-iviewer==0.16.0.dev0) (5.29.3.dev0)
01:02:14 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (5.21.0)
01:02:14 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.9.28)
01:02:14 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (4.2.23)
01:02:14 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (4.0.0)
01:02:14 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.7.0)
01:02:14 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (4.0)
01:02:14 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (6.9.0)
01:02:14 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (23.0.0)
01:02:14 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.9.1.dev0)
01:02:14 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (11.3.0)
01:02:14 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2025.2)
01:02:14 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.2.0)
01:02:14 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (25.0)
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01:02:14 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.9.1)
01:02:14 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.5.3)
01:02:14 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (1.4.4)
01:02:14 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (1.0.0)
01:02:14 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2.3.2)
01:02:14 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (6.0.2)
01:02:14 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.6.5)
01:02:14 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2.32.5)
01:02:14 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (80.9.0)
01:02:14 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.45.1)
01:02:14 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.4.3)
01:02:14 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.10)
01:02:14 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (1.26.20)
01:02:14 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2025.8.3)
01:02:14 Building wheels for collected packages: omero-iviewer
01:02:14 DEPRECATION: Building 'omero-iviewer' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-iviewer'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:02:14 Building wheel for omero-iviewer (setup.py): started
01:02:15 Building wheel for omero-iviewer (setup.py): finished with status 'done'
01:02:15 Created wheel for omero-iviewer: filename=omero_iviewer-0.16.0.dev0-py3-none-any.whl size=822092 sha256=76bc9628834de1077d7f8f2d11c79b02e478e3ad368b4452c1110659ba3946de
01:02:15 Stored in directory: /home/omero/.cache/pip/wheels/39/0e/e1/26101d0e34e19a3b65418b90a4c6a4c7ac66e18727f68d4155
01:02:15 Successfully built omero-iviewer
01:02:15 Installing collected packages: omero-iviewer
01:02:15 Successfully installed omero-iviewer-0.16.0.dev0
01:02:15 + omero config set omero.web.use_x_forwarded_host true
01:02:16 + omero config set omero.web.secure_proxy_ssl_header '["HTTP_X_FORWARDED_PROTO", "https"]'
01:02:16 + omero config append omero.web.apps '"omero_iviewer"'
01:02:17 + omero config set omero.web.viewer.view omero_iviewer.views.index
01:02:18 + omero config append omero.web.open_with '["omero_iviewer", "omero_iviewer_index", {"supported_objects":["images", "dataset", "well"], "script_url": "omero_iviewer/openwith.js", "label": "OMERO.iviewer"}]'
01:02:19 + pip install git+https://github.com/snoopycrimecop/omero-figure.git@merge_ci#egg=omero-figure
01:02:20 Collecting omero-figure
01:02:20 Cloning https://github.com/snoopycrimecop/omero-figure.git (to revision merge_ci) to /tmp/pip-install-mgtkraho/omero-figure_5eacc3474065463a9b40ff67d8f8f3e3
01:02:20 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-figure.git /tmp/pip-install-mgtkraho/omero-figure_5eacc3474065463a9b40ff67d8f8f3e3
01:02:21 Resolved https://github.com/snoopycrimecop/omero-figure.git to commit 198424b627298fcc3a1800047e909822bc16018a
01:02:21 Preparing metadata (setup.py): started
01:02:21 Preparing metadata (setup.py): finished with status 'done'
01:02:21 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-figure) (5.29.3.dev0)
01:02:21 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (5.21.0)
01:02:21 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (0.9.28)
01:02:21 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (4.2.23)
01:02:21 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (4.0.0)
01:02:21 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (3.7.0)
01:02:21 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (4.0)
01:02:21 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (6.9.0)
01:02:21 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (23.0.0)
01:02:21 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (0.9.1.dev0)
01:02:21 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (11.3.0)
01:02:21 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (2025.2)
01:02:21 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (3.2.0)
01:02:21 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (25.0)
01:02:21 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (6.5.2)
01:02:21 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-figure) (3.9.1)
01:02:21 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-figure) (0.5.3)
01:02:21 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (1.4.4)
01:02:21 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (1.0.0)
01:02:21 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (2.3.2)
01:02:21 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (6.0.2)
01:02:21 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (3.6.5)
01:02:21 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (2.32.5)
01:02:21 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-figure) (80.9.0)
01:02:21 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-figure) (0.45.1)
01:02:21 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (3.4.3)
01:02:21 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (3.10)
01:02:21 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (1.26.20)
01:02:21 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (2025.8.3)
01:02:21 Building wheels for collected packages: omero-figure
01:02:21 DEPRECATION: Building 'omero-figure' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-figure'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:02:21 Building wheel for omero-figure (setup.py): started
01:02:33 Building wheel for omero-figure (setup.py): finished with status 'done'
01:02:33 Created wheel for omero-figure: filename=omero_figure-7.2.2.dev0-py3-none-any.whl size=1239692 sha256=d4cc1b912a687e5a6080d78d75b7027986715a72eba66a9d67510aca2e0bb525
01:02:33 Stored in directory: /tmp/pip-ephem-wheel-cache-06wpu4fu/wheels/7a/dc/8b/d40cd89a9e4e8dd92668ddd6fe211eba320b7e8a12637ec527
01:02:33 Successfully built omero-figure
01:02:33 Installing collected packages: omero-figure
01:02:33 Successfully installed omero-figure-7.2.2.dev0
01:02:33 + omero config append omero.web.apps '"omero_figure"'
01:02:34 + omero config append omero.web.ui.top_links '["Figure", "figure_index", {"title": "Open Figure in new tab", "target": "_blank"}]'
01:02:35 + omero config append omero.web.open_with '["omero_figure", "new_figure", {"supported_objects":["images"], "target": "_blank", "label": "OMERO.figure"}]'
01:02:36 + pip install https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
01:02:36 Collecting https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
01:02:36 Downloading https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
01:02:36 - 72.8 kB 65.2 MB/s 0:00:00
01:02:36 Preparing metadata (setup.py): started
01:02:37 Preparing metadata (setup.py): finished with status 'done'
01:02:37 Requirement already satisfied: omero-web>=5.6.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-parade==0.2.5.dev0) (5.29.3.dev0)
01:02:37 Requirement already satisfied: numpy in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-parade==0.2.5.dev0) (2.3.2)
01:02:37 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (5.21.0)
01:02:37 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.9.28)
01:02:37 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.2.23)
01:02:37 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.0.0)
01:02:37 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.7.0)
01:02:37 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.0)
01:02:37 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.9.0)
01:02:37 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (23.0.0)
01:02:37 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.9.1.dev0)
01:02:37 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (11.3.0)
01:02:37 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2025.2)
01:02:37 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.2.0)
01:02:37 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (25.0)
01:02:37 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.5.2)
01:02:37 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.9.1)
01:02:37 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.5.3)
01:02:37 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (1.4.4)
01:02:37 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (1.0.0)
01:02:37 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.0.2)
01:02:37 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.6.5)
01:02:37 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2.32.5)
01:02:37 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (80.9.0)
01:02:37 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.45.1)
01:02:37 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.4.3)
01:02:37 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.10)
01:02:37 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (1.26.20)
01:02:37 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2025.8.3)
01:02:37 Building wheels for collected packages: omero-parade
01:02:37 DEPRECATION: Building 'omero-parade' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-parade'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:02:37 Building wheel for omero-parade (setup.py): started
01:02:42 Building wheel for omero-parade (setup.py): finished with status 'done'
01:02:42 Created wheel for omero-parade: filename=omero_parade-0.2.5.dev0-py3-none-any.whl size=299596 sha256=8e59d4bbc0a32422b9a5f6fa7c0457962a806538ebd498580b71cf5df2673581
01:02:42 Stored in directory: /tmp/pip-ephem-wheel-cache-qcuy6bfi/wheels/bd/68/cc/5b4555362bd6182a2bab73b3ef3d25504d19ab613a30f04fea
01:02:42 Successfully built omero-parade
01:02:42 Installing collected packages: omero-parade
01:02:42 Successfully installed omero-parade-0.2.5.dev0
01:02:42 + omero config append omero.web.apps '"omero_parade"'
01:02:43 + omero config append omero.web.ui.center_plugins '["Parade", "omero_parade/init.js.html", "omero_parade"]'
01:02:44 + pip install git+https://github.com/snoopycrimecop/omero-fpbioimage.git@merge_ci#egg=omero-fpbioimage
01:02:44 Collecting omero-fpbioimage
01:02:44 Cloning https://github.com/snoopycrimecop/omero-fpbioimage.git (to revision merge_ci) to /tmp/pip-install-agn_jnsy/omero-fpbioimage_b0c833e735564f25987c38559454656e
01:02:44 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-fpbioimage.git /tmp/pip-install-agn_jnsy/omero-fpbioimage_b0c833e735564f25987c38559454656e
01:02:46 Running command git checkout -b merge_ci --track origin/merge_ci
01:02:46 Switched to a new branch 'merge_ci'
01:02:46 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:02:46 Resolved https://github.com/snoopycrimecop/omero-fpbioimage.git to commit c3833040320f27c2efa64a74abc5413a2493703f
01:02:46 Preparing metadata (setup.py): started
01:02:46 Preparing metadata (setup.py): finished with status 'done'
01:02:46 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-fpbioimage) (5.29.3.dev0)
01:02:46 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (5.21.0)
01:02:46 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (0.9.28)
01:02:46 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.2.23)
01:02:46 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.0.0)
01:02:46 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (3.7.0)
01:02:46 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.0)
01:02:46 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (6.9.0)
01:02:46 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (23.0.0)
01:02:46 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (0.9.1.dev0)
01:02:46 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (11.3.0)
01:02:46 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (2025.2)
01:02:46 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (3.2.0)
01:02:46 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (25.0)
01:02:46 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (6.5.2)
01:02:46 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-fpbioimage) (3.9.1)
01:02:46 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-fpbioimage) (0.5.3)
01:02:46 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (1.4.4)
01:02:46 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (1.0.0)
01:02:46 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.3.2)
01:02:46 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (6.0.2)
01:02:46 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.6.5)
01:02:46 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.32.5)
01:02:46 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-fpbioimage) (80.9.0)
01:02:46 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-fpbioimage) (0.45.1)
01:02:46 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.4.3)
01:02:46 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.10)
01:02:46 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (1.26.20)
01:02:46 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2025.8.3)
01:02:46 Building wheels for collected packages: omero-fpbioimage
01:02:46 DEPRECATION: Building 'omero-fpbioimage' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-fpbioimage'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:02:46 Building wheel for omero-fpbioimage (setup.py): started
01:02:47 Building wheel for omero-fpbioimage (setup.py): finished with status 'done'
01:02:47 Created wheel for omero-fpbioimage: filename=omero_fpbioimage-0.4.2.dev0-py3-none-any.whl size=6923067 sha256=a43fba3291191056324d4c4debbff7fd14e26dea37f1e86ed58c95ed6ef89892
01:02:47 Stored in directory: /tmp/pip-ephem-wheel-cache-erc99vdb/wheels/7f/4c/02/4b9f833e501995681f93910cf0ef1e684e35d2352b62477460
01:02:47 Successfully built omero-fpbioimage
01:02:47 Installing collected packages: omero-fpbioimage
01:02:47 Successfully installed omero-fpbioimage-0.4.2.dev0
01:02:47 + omero config append omero.web.apps '"omero_fpbioimage"'
01:02:48 + omero config append omero.web.open_with '["omero_fpbioimage", "fpbioimage_index", {"script_url": "fpbioimage/openwith.js", "supported_objects": ["image"], "label": "FPBioimage"}]'
01:02:49 + pip install git+https://github.com/snoopycrimecop/omero-gallery.git@merge_ci#egg=omero-gallery
01:02:49 Collecting omero-gallery
01:02:49 Cloning https://github.com/snoopycrimecop/omero-gallery.git (to revision merge_ci) to /tmp/pip-install-_fjqcqfo/omero-gallery_e7974ab16f2c427b9f3f657c78a71f17
01:02:49 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-gallery.git /tmp/pip-install-_fjqcqfo/omero-gallery_e7974ab16f2c427b9f3f657c78a71f17
01:02:50 Resolved https://github.com/snoopycrimecop/omero-gallery.git to commit 616a6ab26b8da3eae8cd28533afe1210a76729e7
01:02:50 Preparing metadata (setup.py): started
01:02:50 Preparing metadata (setup.py): finished with status 'done'
01:02:50 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-gallery) (5.29.3.dev0)
01:02:50 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (5.21.0)
01:02:50 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (0.9.28)
01:02:50 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.2.23)
01:02:50 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.0.0)
01:02:50 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (3.7.0)
01:02:50 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.0)
01:02:50 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (6.9.0)
01:02:50 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (23.0.0)
01:02:50 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (0.9.1.dev0)
01:02:50 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (11.3.0)
01:02:50 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (2025.2)
01:02:50 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (3.2.0)
01:02:50 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (25.0)
01:02:50 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (6.5.2)
01:02:50 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-gallery) (3.9.1)
01:02:50 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-gallery) (0.5.3)
01:02:50 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (1.4.4)
01:02:50 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (1.0.0)
01:02:50 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.3.2)
01:02:50 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (6.0.2)
01:02:50 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.6.5)
01:02:50 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.32.5)
01:02:50 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-gallery) (80.9.0)
01:02:50 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-gallery) (0.45.1)
01:02:50 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.4.3)
01:02:50 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.10)
01:02:50 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (1.26.20)
01:02:50 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2025.8.3)
01:02:50 Building wheels for collected packages: omero-gallery
01:02:50 DEPRECATION: Building 'omero-gallery' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-gallery'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:02:50 Building wheel for omero-gallery (setup.py): started
01:02:51 Building wheel for omero-gallery (setup.py): finished with status 'done'
01:02:51 Created wheel for omero-gallery: filename=omero_gallery-3.4.4.dev0-py3-none-any.whl size=308014 sha256=31c6195c667f9d889239aad9d7df8c5b46e3e06addf43f7814e264368b519695
01:02:51 Stored in directory: /tmp/pip-ephem-wheel-cache-un9ef8_e/wheels/2f/43/25/64e360f70273008be68f22554e6bbc580d6058b34db2dc01fe
01:02:51 Successfully built omero-gallery
01:02:51 Installing collected packages: omero-gallery
01:02:51 Successfully installed omero-gallery-3.4.4.dev0
01:02:51 + omero config append omero.web.apps '"omero_gallery"'
01:02:51 + omero config append omero.web.ui.top_links '["Gallery", "webgallery_index", {"title": "Browse Gallery"}]'
01:02:52 + omero config set omero.web.gallery.category_queries '{"all":{"label":"All Studies", "index":0, "query":"FIRST50:Name"}}'
01:02:53 + pip install git+https://github.com/snoopycrimecop/omero-mapr.git@merge_ci#egg=omero-mapr
01:02:54 Collecting omero-mapr
01:02:54 Cloning https://github.com/snoopycrimecop/omero-mapr.git (to revision merge_ci) to /tmp/pip-install-ptrz00ew/omero-mapr_5c718e9c35904d5f8f79052846a6e131
01:02:54 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-mapr.git /tmp/pip-install-ptrz00ew/omero-mapr_5c718e9c35904d5f8f79052846a6e131
01:02:54 Resolved https://github.com/snoopycrimecop/omero-mapr.git to commit 796a36d6845018d74c7022fef95c925fd98716b4
01:02:54 Preparing metadata (setup.py): started
01:02:55 Preparing metadata (setup.py): finished with status 'done'
01:02:55 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-mapr) (2.32.5)
01:02:55 Requirement already satisfied: omero-web>=5.16.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web[redis]>=5.16.0->omero-mapr) (5.29.3.dev0)
01:02:55 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (5.21.0)
01:02:55 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.9.28)
01:02:55 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (4.2.23)
01:02:55 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (4.0.0)
01:02:55 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.7.0)
01:02:55 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (4.0)
01:02:55 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (6.9.0)
01:02:55 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (23.0.0)
01:02:55 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.9.1.dev0)
01:02:55 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (11.3.0)
01:02:55 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (2025.2)
01:02:55 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.2.0)
01:02:55 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (25.0)
01:02:55 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (6.5.2)
01:02:55 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.9.1)
01:02:55 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.5.3)
01:02:55 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (1.4.4)
01:02:55 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (1.0.0)
01:02:55 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (2.3.2)
01:02:55 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (6.0.2)
01:02:55 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.6.5)
01:02:55 Collecting django-redis==5.3.0 (from omero-web[redis]>=5.16.0->omero-mapr)
01:02:55 Using cached django_redis-5.3.0-py3-none-any.whl.metadata (31 kB)
01:02:55 Collecting redis!=4.0.0,!=4.0.1,>=3 (from django-redis==5.3.0->omero-web[redis]>=5.16.0->omero-mapr)
01:02:55 Using cached redis-6.4.0-py3-none-any.whl.metadata (10 kB)
01:02:55 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (80.9.0)
01:02:55 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.45.1)
01:02:55 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (3.4.3)
01:02:55 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (3.10)
01:02:55 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (1.26.20)
01:02:55 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (2025.8.3)
01:02:55 Using cached django_redis-5.3.0-py3-none-any.whl (30 kB)
01:02:55 Using cached redis-6.4.0-py3-none-any.whl (279 kB)
01:02:55 Building wheels for collected packages: omero-mapr
01:02:55 DEPRECATION: Building 'omero-mapr' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-mapr'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:02:55 Building wheel for omero-mapr (setup.py): started
01:02:55 Building wheel for omero-mapr (setup.py): finished with status 'done'
01:02:55 Created wheel for omero-mapr: filename=omero_mapr-0.5.4.dev0-py3-none-any.whl size=67212 sha256=4c51a81581e3643a5e4564978952ebb3e76a2ddea18d0c01a23649dff0a298b2
01:02:55 Stored in directory: /tmp/pip-ephem-wheel-cache-39p6bfcq/wheels/4c/63/ca/d95f4dd3e08412d91be258a0a0164ddd07340dc39cfc1314b7
01:02:55 Successfully built omero-mapr
01:02:55 Installing collected packages: redis, django-redis, omero-mapr
01:02:55
01:02:55 Successfully installed django-redis-5.3.0 omero-mapr-0.5.4.dev0 redis-6.4.0
01:02:55 + omero config append omero.web.apps '"omero_mapr"'
01:02:56 + omero config append omero.web.mapr.config '{"menu": "anyvalue", "config":{"default":["Any Value"], "all":[], "ns":["openmicroscopy.org/omero/client/mapAnnotation"], "label":"Any"}}'
01:02:57 + omero config append omero.web.ui.top_links '["Any Map Value", {"viewname": "maprindex_anyvalue"}, {"title": "Search for values in any Key-Value pair"}]'
01:02:58 + pip install git+https://github.com/snoopycrimecop/omero-weberror.git@merge_ci#egg=omero-weberror
01:02:59 Collecting omero-weberror
01:02:59 Cloning https://github.com/snoopycrimecop/omero-weberror.git (to revision merge_ci) to /tmp/pip-install-jrr2o1ll/omero-weberror_4e67654501be401ea457b2ebb6c8f408
01:02:59 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-weberror.git /tmp/pip-install-jrr2o1ll/omero-weberror_4e67654501be401ea457b2ebb6c8f408
01:02:59 Running command git checkout -b merge_ci --track origin/merge_ci
01:03:00 Switched to a new branch 'merge_ci'
01:03:00 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:03:00 Resolved https://github.com/snoopycrimecop/omero-weberror.git to commit 4aae9d1ae99c5edb154487c926957a2abd12991c
01:03:00 Preparing metadata (setup.py): started
01:03:00 Preparing metadata (setup.py): finished with status 'done'
01:03:00 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-weberror) (5.29.3.dev0)
01:03:00 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (5.21.0)
01:03:00 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (0.9.28)
01:03:00 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.2.23)
01:03:00 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.0.0)
01:03:00 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (3.7.0)
01:03:00 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.0)
01:03:00 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (6.9.0)
01:03:00 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (23.0.0)
01:03:00 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (0.9.1.dev0)
01:03:00 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (11.3.0)
01:03:00 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (2025.2)
01:03:00 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (3.2.0)
01:03:00 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (25.0)
01:03:00 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (6.5.2)
01:03:00 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-weberror) (3.9.1)
01:03:00 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-weberror) (0.5.3)
01:03:00 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (1.4.4)
01:03:00 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (1.0.0)
01:03:00 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.3.2)
01:03:00 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (6.0.2)
01:03:00 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.6.5)
01:03:00 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.32.5)
01:03:00 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-weberror) (80.9.0)
01:03:00 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-weberror) (0.45.1)
01:03:00 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.4.3)
01:03:00 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.10)
01:03:00 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (1.26.20)
01:03:00 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2025.8.3)
01:03:00 Building wheels for collected packages: omero-weberror
01:03:00 DEPRECATION: Building 'omero-weberror' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-weberror'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:03:00 Building wheel for omero-weberror (setup.py): started
01:03:00 Building wheel for omero-weberror (setup.py): finished with status 'done'
01:03:00 Created wheel for omero-weberror: filename=omero_weberror-0.4.2.dev0-py3-none-any.whl size=18085 sha256=75ad15fe9e33a457cc3b6ce794e2fddbd0e4c094f5e8549c3e17c3a3642ed168
01:03:00 Stored in directory: /tmp/pip-ephem-wheel-cache-_n10wtjn/wheels/1b/c4/e6/04bca3174ab41b8b747e8bf10caebc5c9c15b7a2eacb8b65c6
01:03:00 Successfully built omero-weberror
01:03:00 Installing collected packages: omero-weberror
01:03:00 Successfully installed omero-weberror-0.4.2.dev0
01:03:00 + omero config append omero.web.apps '"omero_weberror"'
01:03:01 + pip install git+https://github.com/snoopycrimecop/omero-webtest.git@merge_ci#egg=omero-webtest
01:03:02 Collecting omero-webtest
01:03:02 Cloning https://github.com/snoopycrimecop/omero-webtest.git (to revision merge_ci) to /tmp/pip-install-pr3npodi/omero-webtest_15d94efe620c46519b6761491e2a7ebf
01:03:02 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-webtest.git /tmp/pip-install-pr3npodi/omero-webtest_15d94efe620c46519b6761491e2a7ebf
01:03:02 Running command git checkout -b merge_ci --track origin/merge_ci
01:03:03 Switched to a new branch 'merge_ci'
01:03:03 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:03:03 Resolved https://github.com/snoopycrimecop/omero-webtest.git to commit 4aaf240e17dffccb2c5deae448edf31d66d7dd96
01:03:03 Preparing metadata (setup.py): started
01:03:03 Preparing metadata (setup.py): finished with status 'done'
01:03:03 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-webtest) (5.29.3.dev0)
01:03:03 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (5.21.0)
01:03:03 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (0.9.28)
01:03:03 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.2.23)
01:03:03 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.0.0)
01:03:03 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (3.7.0)
01:03:03 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.0)
01:03:03 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (6.9.0)
01:03:03 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (23.0.0)
01:03:03 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (0.9.1.dev0)
01:03:03 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (11.3.0)
01:03:03 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (2025.2)
01:03:03 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (3.2.0)
01:03:03 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (25.0)
01:03:03 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (6.5.2)
01:03:03 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-webtest) (3.9.1)
01:03:03 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-webtest) (0.5.3)
01:03:03 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (1.4.4)
01:03:03 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (1.0.0)
01:03:03 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.3.2)
01:03:03 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (6.0.2)
01:03:03 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.6.5)
01:03:03 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.32.5)
01:03:03 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-webtest) (80.9.0)
01:03:03 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-webtest) (0.45.1)
01:03:03 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.4.3)
01:03:03 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.10)
01:03:03 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (1.26.20)
01:03:03 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2025.8.3)
01:03:03 Building wheels for collected packages: omero-webtest
01:03:03 DEPRECATION: Building 'omero-webtest' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-webtest'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:03:03 Building wheel for omero-webtest (setup.py): started
01:03:03 Building wheel for omero-webtest (setup.py): finished with status 'done'
01:03:03 Created wheel for omero-webtest: filename=omero_webtest-0.4.3.dev0-py3-none-any.whl size=89791 sha256=45dbb8ca773dc9f25ced95ab2933008f42db8d1979521dc184e3e07f15dae1f0
01:03:03 Stored in directory: /tmp/pip-ephem-wheel-cache-gv966zf0/wheels/fd/26/7d/043e6c0814544fd87c3c46a6e949604651b87f011c6af32975
01:03:03 Successfully built omero-webtest
01:03:03 Installing collected packages: omero-webtest
01:03:03 Successfully installed omero-webtest-0.4.3.dev0
01:03:04 + omero config append omero.web.apps '"omero_webtest"'
01:03:04 + pip install git+https://github.com/German-BioImaging/omero-autotag.git@master
01:03:05 Collecting git+https://github.com/German-BioImaging/omero-autotag.git@master
01:03:05 Cloning https://github.com/German-BioImaging/omero-autotag.git (to revision master) to /tmp/pip-req-build-v673qrrz
01:03:05 Running command git clone --filter=blob:none --quiet https://github.com/German-BioImaging/omero-autotag.git /tmp/pip-req-build-v673qrrz
01:03:06 Resolved https://github.com/German-BioImaging/omero-autotag.git to commit abbd98b087dc4064c3cf5b566b11b0b3fc623bd1
01:03:06 Preparing metadata (setup.py): started
01:03:06 Preparing metadata (setup.py): finished with status 'done'
01:03:06 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-autotag==4.1.0) (5.29.3.dev0)
01:03:06 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (5.21.0)
01:03:06 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (0.9.28)
01:03:06 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (4.2.23)
01:03:06 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (4.0.0)
01:03:06 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (3.7.0)
01:03:06 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (4.0)
01:03:06 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (6.9.0)
01:03:06 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (23.0.0)
01:03:06 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (0.9.1.dev0)
01:03:06 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (11.3.0)
01:03:06 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (2025.2)
01:03:06 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (3.2.0)
01:03:06 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (25.0)
01:03:06 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (6.5.2)
01:03:06 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-autotag==4.1.0) (3.9.1)
01:03:06 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-autotag==4.1.0) (0.5.3)
01:03:06 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (1.4.4)
01:03:06 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (1.0.0)
01:03:06 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (2.3.2)
01:03:06 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (6.0.2)
01:03:06 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (3.6.5)
01:03:06 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (2.32.5)
01:03:06 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-autotag==4.1.0) (80.9.0)
01:03:06 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-autotag==4.1.0) (0.45.1)
01:03:06 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (3.4.3)
01:03:06 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (3.10)
01:03:06 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (1.26.20)
01:03:06 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (2025.8.3)
01:03:06 Building wheels for collected packages: omero-autotag
01:03:06 DEPRECATION: Building 'omero-autotag' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-autotag'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:03:06 Building wheel for omero-autotag (setup.py): started
01:03:28 Building wheel for omero-autotag (setup.py): finished with status 'done'
01:03:28 Created wheel for omero-autotag: filename=omero_autotag-4.1.0-py3-none-any.whl size=617818 sha256=5c8deeaefcf7ffc893d63009abc3146e26ce6185814506a2afed508a4695d653
01:03:28 Stored in directory: /tmp/pip-ephem-wheel-cache-q6vstkx3/wheels/05/82/4d/a3af657cf0a0f2014bb3f28257ed2d48d57fb0820c44fc0de6
01:03:28 Successfully built omero-autotag
01:03:28 Installing collected packages: omero-autotag
01:03:28 Successfully installed omero-autotag-4.1.0
01:03:28 + omero config append omero.web.apps '"omero_autotag"'
01:03:29 + omero config append omero.web.ui.center_plugins '["Auto Tag", "omero_autotag/auto_tag_init.js.html", "auto_tag_panel"]'
01:03:30 + pip install git+https://github.com/German-BioImaging/omero-tagsearch.git@refs/pull/16/head
01:03:31 Collecting git+https://github.com/German-BioImaging/omero-tagsearch.git@refs/pull/16/head
01:03:31 Cloning https://github.com/German-BioImaging/omero-tagsearch.git (to revision refs/pull/16/head) to /tmp/pip-req-build-oq1b9c_0
01:03:31 Running command git clone --filter=blob:none --quiet https://github.com/German-BioImaging/omero-tagsearch.git /tmp/pip-req-build-oq1b9c_0
01:03:31 Did not find branch or tag 'refs/pull/16/head', assuming revision or ref.
01:03:31 Running command git fetch -q https://github.com/German-BioImaging/omero-tagsearch.git refs/pull/16/head
01:03:32 Running command git checkout -q 4f011465d4a6a6b59f201d315f5376a438410684
01:03:32 Resolved https://github.com/German-BioImaging/omero-tagsearch.git to commit 4f011465d4a6a6b59f201d315f5376a438410684
01:03:32 Preparing metadata (setup.py): started
01:03:32 Preparing metadata (setup.py): finished with status 'done'
01:03:32 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-tagsearch==4.2.0) (5.29.3.dev0)
01:03:32 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (5.21.0)
01:03:32 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.9.28)
01:03:32 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (4.2.23)
01:03:32 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (4.0.0)
01:03:32 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.7.0)
01:03:32 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (4.0)
01:03:32 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (6.9.0)
01:03:32 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (23.0.0)
01:03:32 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.9.1.dev0)
01:03:32 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (11.3.0)
01:03:32 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (2025.2)
01:03:32 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.2.0)
01:03:32 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (25.0)
01:03:32 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (6.5.2)
01:03:32 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.9.1)
01:03:32 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.5.3)
01:03:32 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (1.4.4)
01:03:32 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (1.0.0)
01:03:32 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (2.3.2)
01:03:32 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (6.0.2)
01:03:32 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.6.5)
01:03:32 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (2.32.5)
01:03:32 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-tagsearch==4.2.0) (80.9.0)
01:03:32 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.45.1)
01:03:32 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.4.3)
01:03:32 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.10)
01:03:32 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (1.26.20)
01:03:32 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (2025.8.3)
01:03:32 Building wheels for collected packages: omero-tagsearch
01:03:32 DEPRECATION: Building 'omero-tagsearch' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-tagsearch'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:03:32 Building wheel for omero-tagsearch (setup.py): started
01:03:33 Building wheel for omero-tagsearch (setup.py): finished with status 'done'
01:03:33 Created wheel for omero-tagsearch: filename=omero_tagsearch-4.2.0-py3-none-any.whl size=132257 sha256=1c32c29928b3844dcfde8adbce83852dcf031403411cdd8b1c0d1017e7cecec8
01:03:33 Stored in directory: /tmp/pip-ephem-wheel-cache-1p5t0sqt/wheels/9e/ee/29/cd5c9acc8a621fd035a8c40cb7a1d30371fd6412f2fbe5e166
01:03:33 Successfully built omero-tagsearch
01:03:33 Installing collected packages: omero-tagsearch
01:03:33 Successfully installed omero-tagsearch-4.2.0
01:03:33 + omero config append omero.web.apps '"omero_tagsearch"'
01:03:34 + omero config append omero.web.ui.top_links '["Tag Search", "tagsearch"]'
01:03:35 + pip install git+https://github.com/snoopycrimecop/omero-web-zarr.git@merge_ci#egg=omero-web-zarr
01:03:35 Collecting omero-web-zarr
01:03:35 Cloning https://github.com/snoopycrimecop/omero-web-zarr.git (to revision merge_ci) to /tmp/pip-install-r2j7v4fn/omero-web-zarr_16a59f3f303b4f3499225b2091b28315
01:03:35 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-web-zarr.git /tmp/pip-install-r2j7v4fn/omero-web-zarr_16a59f3f303b4f3499225b2091b28315
01:03:36 Running command git checkout -b merge_ci --track origin/merge_ci
01:03:36 Switched to a new branch 'merge_ci'
01:03:36 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:03:36 Resolved https://github.com/snoopycrimecop/omero-web-zarr.git to commit 37e8fed92d39705fb00f1e75d0c235ba5deefc99
01:03:36 Preparing metadata (setup.py): started
01:03:36 Preparing metadata (setup.py): finished with status 'done'
01:03:36 Collecting omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr (from omero-web-zarr)
01:03:36 Cloning https://github.com/will-moore/omero-cli-zarr.git (to revision register_command) to /tmp/pip-install-r2j7v4fn/omero-cli-zarr_3b3f8b156dab4b30885515f7c74a915b
01:03:36 Running command git clone --filter=blob:none --quiet https://github.com/will-moore/omero-cli-zarr.git /tmp/pip-install-r2j7v4fn/omero-cli-zarr_3b3f8b156dab4b30885515f7c74a915b
01:03:37 Running command git checkout -b register_command --track origin/register_command
01:03:37 Switched to a new branch 'register_command'
01:03:37 branch 'register_command' set up to track 'origin/register_command'.
01:03:37 Resolved https://github.com/will-moore/omero-cli-zarr.git to commit b8c63a5b03b25b3a39748b27729f50d97a5385de
01:03:37 Preparing metadata (setup.py): started
01:03:38 Preparing metadata (setup.py): finished with status 'done'
01:03:38 Requirement already satisfied: omero-py>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (5.21.0)
01:03:38 Collecting ome-zarr<0.12.0,>=0.5.0 (from omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:38 Using cached ome_zarr-0.11.1-py3-none-any.whl.metadata (2.9 kB)
01:03:38 Requirement already satisfied: numpy in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.3.2)
01:03:38 Collecting dask (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:38 Using cached dask-2025.7.0-py3-none-any.whl.metadata (3.8 kB)
01:03:38 Collecting zarr<3,>=2.8.1 (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:38 Using cached zarr-2.18.7-py3-none-any.whl.metadata (5.8 kB)
01:03:38 Collecting fsspec!=2021.07.0,!=2023.9.0,>=0.8 (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:38 Using cached fsspec-2025.7.0-py3-none-any.whl.metadata (12 kB)
01:03:39 Collecting aiohttp<4 (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:39 Using cached aiohttp-3.12.15-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (7.7 kB)
01:03:39 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.32.5)
01:03:39 Collecting scikit-image (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:39 Using cached scikit_image-0.25.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (14 kB)
01:03:39 Collecting toolz (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:39 Using cached toolz-1.0.0-py3-none-any.whl.metadata (5.1 kB)
01:03:39 Collecting aiohappyeyeballs>=2.5.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:39 Using cached aiohappyeyeballs-2.6.1-py3-none-any.whl.metadata (5.9 kB)
01:03:39 Collecting aiosignal>=1.4.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:39 Using cached aiosignal-1.4.0-py3-none-any.whl.metadata (3.7 kB)
01:03:39 Collecting attrs>=17.3.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:39 Using cached attrs-25.3.0-py3-none-any.whl.metadata (10 kB)
01:03:39 Collecting frozenlist>=1.1.1 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:39 Using cached frozenlist-1.7.0-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (18 kB)
01:03:40 Collecting multidict<7.0,>=4.5 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:40 Using cached multidict-6.6.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (5.3 kB)
01:03:40 Collecting propcache>=0.2.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:40 Using cached propcache-0.3.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (12 kB)
01:03:40 Collecting yarl<2.0,>=1.17.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:40 Using cached yarl-1.20.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (73 kB)
01:03:40 Requirement already satisfied: idna>=2.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from yarl<2.0,>=1.17.0->aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.10)
01:03:40 Collecting asciitree (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:40 Using cached asciitree-0.3.3-py3-none-any.whl
01:03:40 Collecting fasteners (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:40 Using cached fasteners-0.20-py3-none-any.whl.metadata (4.8 kB)
01:03:40 Collecting numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0 (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:40 Using cached numcodecs-0.15.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.9 kB)
01:03:40 Collecting deprecated (from numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0->zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:40 Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB)
01:03:40 Collecting typing-extensions>=4.2 (from aiosignal>=1.4.0->aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:40 Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
01:03:40 Collecting s3fs (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:40 Using cached s3fs-2025.7.0-py3-none-any.whl.metadata (1.4 kB)
01:03:40 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.4.4)
01:03:40 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.0.0)
01:03:40 Requirement already satisfied: Pillow>=10.0.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (11.3.0)
01:03:40 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (6.0.2)
01:03:40 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.6.5)
01:03:40 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.2.0)
01:03:40 Collecting click>=8.1 (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:40 Using cached click-8.2.1-py3-none-any.whl.metadata (2.5 kB)
01:03:40 Collecting cloudpickle>=3.0.0 (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:40 Using cached cloudpickle-3.1.1-py3-none-any.whl.metadata (7.1 kB)
01:03:40 Requirement already satisfied: packaging>=20.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (25.0)
01:03:40 Collecting partd>=1.4.0 (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:40 Using cached partd-1.4.2-py3-none-any.whl.metadata (4.6 kB)
01:03:40 Collecting importlib_metadata>=4.13.0 (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:40 Using cached importlib_metadata-8.7.0-py3-none-any.whl.metadata (4.8 kB)
01:03:40 Collecting zipp>=3.20 (from importlib_metadata>=4.13.0->dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:40 Using cached zipp-3.23.0-py3-none-any.whl.metadata (3.6 kB)
01:03:40 Collecting locket (from partd>=1.4.0->dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:40 Using cached locket-1.0.0-py2.py3-none-any.whl.metadata (2.8 kB)
01:03:41 Collecting wrapt<2,>=1.10 (from deprecated->numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0->zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:41 Using cached wrapt-1.17.3-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (6.4 kB)
01:03:41 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.4.3)
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01:03:41 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2025.8.3)
01:03:41 Collecting aiobotocore<3.0.0,>=2.5.4 (from s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:41 Using cached aiobotocore-2.24.1-py3-none-any.whl.metadata (25 kB)
01:03:41 Collecting aioitertools<1.0.0,>=0.5.1 (from aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:03:41 Using cached aioitertools-0.12.0-py3-none-any.whl.metadata (3.8 kB)
01:03:41 Collecting botocore<1.39.12,>=1.39.9 (from aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
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01:03:41 Collecting python-dateutil<3.0.0,>=2.1 (from aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
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01:03:41 Collecting jmespath<2.0.0,>=0.7.1 (from aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
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01:03:41 Collecting six>=1.5 (from python-dateutil<3.0.0,>=2.1->aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
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01:03:41 Collecting tifffile>=2022.8.12 (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
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01:03:42 Using cached zarr-2.18.7-py3-none-any.whl (211 kB)
01:03:42 Using cached numcodecs-0.15.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (8.9 MB)
01:03:42 Using cached aiohappyeyeballs-2.6.1-py3-none-any.whl (15 kB)
01:03:42 Using cached aiosignal-1.4.0-py3-none-any.whl (7.5 kB)
01:03:42 Using cached attrs-25.3.0-py3-none-any.whl (63 kB)
01:03:42 Using cached frozenlist-1.7.0-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (235 kB)
01:03:42 Using cached fsspec-2025.7.0-py3-none-any.whl (199 kB)
01:03:42 Using cached propcache-0.3.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (213 kB)
01:03:42 Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB)
01:03:42 Using cached dask-2025.7.0-py3-none-any.whl (1.5 MB)
01:03:42 Using cached click-8.2.1-py3-none-any.whl (102 kB)
01:03:42 Using cached cloudpickle-3.1.1-py3-none-any.whl (20 kB)
01:03:42 Using cached importlib_metadata-8.7.0-py3-none-any.whl (27 kB)
01:03:42 Using cached partd-1.4.2-py3-none-any.whl (18 kB)
01:03:42 Using cached toolz-1.0.0-py3-none-any.whl (56 kB)
01:03:42 Using cached zipp-3.23.0-py3-none-any.whl (10 kB)
01:03:42 Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB)
01:03:42 Using cached wrapt-1.17.3-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl (82 kB)
01:03:42 Using cached fasteners-0.20-py3-none-any.whl (18 kB)
01:03:42 Using cached locket-1.0.0-py2.py3-none-any.whl (4.4 kB)
01:03:42 Using cached s3fs-2025.7.0-py3-none-any.whl (30 kB)
01:03:42 Using cached aiobotocore-2.24.1-py3-none-any.whl (85 kB)
01:03:42 Using cached aioitertools-0.12.0-py3-none-any.whl (24 kB)
01:03:42 Using cached botocore-1.39.11-py3-none-any.whl (13.9 MB)
01:03:42 Using cached jmespath-1.0.1-py3-none-any.whl (20 kB)
01:03:42 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl (229 kB)
01:03:42 Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
01:03:42 Using cached scikit_image-0.25.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (14.8 MB)
01:03:42 Using cached imageio-2.37.0-py3-none-any.whl (315 kB)
01:03:42 Using cached lazy_loader-0.4-py3-none-any.whl (12 kB)
01:03:42 Using cached networkx-3.5-py3-none-any.whl (2.0 MB)
01:03:42 Using cached scipy-1.16.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (35.4 MB)
01:03:42 Using cached tifffile-2025.8.28-py3-none-any.whl (231 kB)
01:03:42 Building wheels for collected packages: omero-web-zarr, omero-cli-zarr
01:03:42 DEPRECATION: Building 'omero-web-zarr' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-web-zarr'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:03:42 Building wheel for omero-web-zarr (setup.py): started
01:03:42 Building wheel for omero-web-zarr (setup.py): finished with status 'done'
01:03:42 Created wheel for omero-web-zarr: filename=omero_web_zarr-0.1.2.dev0-py3-none-any.whl size=26596 sha256=e60e1ef869a59843ec03fb24348e9427ee87a7e36afc3c0ac835171510f4b7f1
01:03:42 Stored in directory: /tmp/pip-ephem-wheel-cache-byrfv0t8/wheels/97/92/0c/1f5befedf8dfe340e4f39c35149d27cd63d884ad999f237376
01:03:42 DEPRECATION: Building 'omero-cli-zarr' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-cli-zarr'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:03:42 Building wheel for omero-cli-zarr (setup.py): started
01:03:43 Building wheel for omero-cli-zarr (setup.py): finished with status 'done'
01:03:43 Created wheel for omero-cli-zarr: filename=omero_cli_zarr-0.1.dev549+gb8c63a5-py3-none-any.whl size=37725 sha256=f7ab9a0b3b2f4b3efc3e61b4f6682a43ee3a9a1090fec9029eed8e9c50610a98
01:03:43 Stored in directory: /tmp/pip-ephem-wheel-cache-byrfv0t8/wheels/32/e3/da/575f12ddf430a7257c1217df5cf4a5b6c12fbf5d645c6b4d3a
01:03:43 Successfully built omero-web-zarr omero-cli-zarr
01:03:43 Installing collected packages: asciitree, zipp, wrapt, typing-extensions, toolz, tifffile, six, scipy, propcache, networkx, multidict, locket, lazy-loader, jmespath, imageio, fsspec, frozenlist, fasteners, cloudpickle, click, attrs, aioitertools, aiohappyeyeballs, yarl, scikit-image, python-dateutil, partd, importlib_metadata, deprecated, aiosignal, numcodecs, dask, botocore, aiohttp, zarr, aiobotocore, s3fs, ome-zarr, omero-cli-zarr, omero-web-zarr
01:03:53
01:03:53 Successfully installed aiobotocore-2.24.1 aiohappyeyeballs-2.6.1 aiohttp-3.12.15 aioitertools-0.12.0 aiosignal-1.4.0 asciitree-0.3.3 attrs-25.3.0 botocore-1.39.11 click-8.2.1 cloudpickle-3.1.1 dask-2025.7.0 deprecated-1.2.18 fasteners-0.20 frozenlist-1.7.0 fsspec-2025.7.0 imageio-2.37.0 importlib_metadata-8.7.0 jmespath-1.0.1 lazy-loader-0.4 locket-1.0.0 multidict-6.6.4 networkx-3.5 numcodecs-0.15.1 ome-zarr-0.11.1 omero-cli-zarr-0.1.dev549+gb8c63a5 omero-web-zarr-0.1.2.dev0 partd-1.4.2 propcache-0.3.2 python-dateutil-2.9.0.post0 s3fs-2025.7.0 scikit-image-0.25.2 scipy-1.16.1 six-1.17.0 tifffile-2025.8.28 toolz-1.0.0 typing-extensions-4.15.0 wrapt-1.17.3 yarl-1.20.1 zarr-2.18.7 zipp-3.23.0
01:03:53 + omero config append omero.web.apps '"omero_web_zarr"'
01:03:55 + omero config append omero.web.open_with '["web_zarr_import", "omero_web_zarr_import", {"supported_objects":["dataset"], "label": "Import OME-Zarr"}]'
01:03:56 + pip install git+https://github.com/BioNGFF/omero-biofilefinder.git@main#egg=omero-biofilefinder
01:03:56 Collecting omero-biofilefinder
01:03:56 Cloning https://github.com/BioNGFF/omero-biofilefinder.git (to revision main) to /tmp/pip-install-57cigpni/omero-biofilefinder_0e8f5ef2d9ce40c189f83de3dceef468
01:03:56 Running command git clone --filter=blob:none --quiet https://github.com/BioNGFF/omero-biofilefinder.git /tmp/pip-install-57cigpni/omero-biofilefinder_0e8f5ef2d9ce40c189f83de3dceef468
01:03:58 Resolved https://github.com/BioNGFF/omero-biofilefinder.git to commit e5c9133e7ae55ae643fc2505866b04a1149c28c3
01:03:58 Installing build dependencies: started
01:03:59 Installing build dependencies: finished with status 'done'
01:03:59 Getting requirements to build wheel: started
01:03:59 Getting requirements to build wheel: finished with status 'done'
01:03:59 Preparing metadata (pyproject.toml): started
01:03:59 Preparing metadata (pyproject.toml): finished with status 'done'
01:03:59 Requirement already satisfied: omero-web in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-biofilefinder) (5.29.3.dev0)
01:03:59 Collecting pyarrow (from omero-biofilefinder)
01:03:59 Using cached pyarrow-21.0.0-cp311-cp311-manylinux_2_28_x86_64.whl.metadata (3.3 kB)
01:03:59 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (5.21.0)
01:03:59 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (0.9.28)
01:03:59 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (4.2.23)
01:03:59 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (4.0.0)
01:03:59 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (3.7.0)
01:03:59 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (4.0)
01:03:59 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (6.9.0)
01:03:59 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (23.0.0)
01:03:59 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (0.9.1.dev0)
01:03:59 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (11.3.0)
01:03:59 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (2025.2)
01:03:59 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (3.2.0)
01:03:59 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (25.0)
01:03:59 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (6.5.2)
01:03:59 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web->omero-biofilefinder) (3.9.1)
01:03:59 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web->omero-biofilefinder) (0.5.3)
01:04:00 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (1.4.4)
01:04:00 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (1.0.0)
01:04:00 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (2.3.2)
01:04:00 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (6.0.2)
01:04:00 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (3.6.5)
01:04:00 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (2.32.5)
01:04:00 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web->omero-biofilefinder) (80.9.0)
01:04:00 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web->omero-biofilefinder) (0.45.1)
01:04:00 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (3.4.3)
01:04:00 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (3.10)
01:04:00 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (1.26.20)
01:04:00 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (2025.8.3)
01:04:00 Using cached pyarrow-21.0.0-cp311-cp311-manylinux_2_28_x86_64.whl (42.8 MB)
01:04:00 Building wheels for collected packages: omero-biofilefinder
01:04:00 Building wheel for omero-biofilefinder (pyproject.toml): started
01:04:00 Building wheel for omero-biofilefinder (pyproject.toml): finished with status 'done'
01:04:00 Created wheel for omero-biofilefinder: filename=omero_biofilefinder-0.1.0.dev0-py3-none-any.whl size=6333148 sha256=a5f2a8f62bdae0fbfb44a513cb183cd4f3c1e3401a9f3778e0cad92f2a172297
01:04:00 Stored in directory: /tmp/pip-ephem-wheel-cache-o21a6xvs/wheels/d5/6e/a2/d890a6f8bfe579c8dab0c5138dcc79f4395c0320b24aedff84
01:04:00 Successfully built omero-biofilefinder
01:04:01 Installing collected packages: pyarrow, omero-biofilefinder
01:04:02
01:04:02 Successfully installed omero-biofilefinder-0.1.0.dev0 pyarrow-21.0.0
01:04:02 + omero config append omero.web.apps '"omero_biofilefinder"'
01:04:04 + omero config set omero.web.bff.force_https True
01:04:05 + omero config append omero.web.open_with '["omero_bff", "omero_biofilefinder_openwith", {"supported_objects":["project"], "target": "_blank", "label": "BioFile Finder"}]'
01:04:06 + pip install git+https://github.com/snoopycrimecop/omero-signup.git@merge_ci#egg=omero-signup
01:04:07 Collecting omero-signup
01:04:07 Cloning https://github.com/snoopycrimecop/omero-signup.git (to revision merge_ci) to /tmp/pip-install-esz6fofq/omero-signup_0c927167da6d41f58336ec4d4132e463
01:04:07 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-signup.git /tmp/pip-install-esz6fofq/omero-signup_0c927167da6d41f58336ec4d4132e463
01:04:08 Running command git checkout -b merge_ci --track origin/merge_ci
01:04:08 Switched to a new branch 'merge_ci'
01:04:08 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:04:08 Resolved https://github.com/snoopycrimecop/omero-signup.git to commit 69198a932b3d97f7d59fb6472deaf6f804ae94ba
01:04:08 Preparing metadata (setup.py): started
01:04:08 Preparing metadata (setup.py): finished with status 'done'
01:04:08 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-signup) (5.29.3.dev0)
01:04:08 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (5.21.0)
01:04:08 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (0.9.28)
01:04:08 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.2.23)
01:04:08 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.0.0)
01:04:08 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (3.7.0)
01:04:08 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.0)
01:04:08 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (6.9.0)
01:04:08 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (23.0.0)
01:04:08 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (0.9.1.dev0)
01:04:08 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (11.3.0)
01:04:08 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (2025.2)
01:04:08 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (3.2.0)
01:04:08 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (25.0)
01:04:08 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (6.5.2)
01:04:08 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-signup) (3.9.1)
01:04:08 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-signup) (0.5.3)
01:04:08 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (1.4.4)
01:04:08 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (1.0.0)
01:04:08 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.3.2)
01:04:08 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (6.0.2)
01:04:08 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.6.5)
01:04:08 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.32.5)
01:04:08 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-signup) (80.9.0)
01:04:08 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-signup) (0.45.1)
01:04:08 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.4.3)
01:04:08 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.10)
01:04:08 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (1.26.20)
01:04:08 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2025.8.3)
01:04:08 Building wheels for collected packages: omero-signup
01:04:08 DEPRECATION: Building 'omero-signup' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-signup'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:04:08 Building wheel for omero-signup (setup.py): started
01:04:08 Building wheel for omero-signup (setup.py): finished with status 'done'
01:04:08 Created wheel for omero-signup: filename=omero_signup-0.3.4.dev0-py3-none-any.whl size=24419 sha256=971e7b5e1bd3840aa802f25d2732ec5ca9f4adbbb57371ba289e4facc7c6ec61
01:04:08 Stored in directory: /tmp/pip-ephem-wheel-cache-squp6z26/wheels/47/cb/fe/b950fb8aeb3188c590a5e045d574b1614eac317e43fa840236
01:04:08 Successfully built omero-signup
01:04:09 Installing collected packages: omero-signup
01:04:09 Successfully installed omero-signup-0.3.4.dev0
01:04:09 + omero config append omero.web.apps '"omero_signup"'
01:04:10 + omero config set omero.web.signup.admin.user root
01:04:12 + omero config set omero.web.signup.admin.password omero
01:04:13 + omero config set omero.web.signup.group.name signup-test
01:04:14 + omero config set omero.web.signup.email.enabled True
01:04:16 + pip install git+https://github.com/snoopycrimecop/omero-virtual-microscope.git@merge_ci#egg=omero-virtual-microscope
01:04:16 Collecting omero-virtual-microscope
01:04:16 Cloning https://github.com/snoopycrimecop/omero-virtual-microscope.git (to revision merge_ci) to /tmp/pip-install-ogu4bs6x/omero-virtual-microscope_9fb1485984d44e5384d0b679854f5826
01:04:16 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-virtual-microscope.git /tmp/pip-install-ogu4bs6x/omero-virtual-microscope_9fb1485984d44e5384d0b679854f5826
01:04:17 Running command git checkout -b merge_ci --track origin/merge_ci
01:04:17 Switched to a new branch 'merge_ci'
01:04:17 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:04:17 Resolved https://github.com/snoopycrimecop/omero-virtual-microscope.git to commit e9efb5c4b5995ad70147eb8effd4ec9775d817a6
01:04:17 Preparing metadata (setup.py): started
01:04:18 Preparing metadata (setup.py): finished with status 'done'
01:04:18 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-virtual-microscope) (5.29.3.dev0)
01:04:18 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (5.21.0)
01:04:18 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (0.9.28)
01:04:18 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.2.23)
01:04:18 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.0.0)
01:04:18 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (3.7.0)
01:04:18 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.0)
01:04:18 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (6.9.0)
01:04:18 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (23.0.0)
01:04:18 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (0.9.1.dev0)
01:04:18 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (11.3.0)
01:04:18 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (2025.2)
01:04:18 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (3.2.0)
01:04:18 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (25.0)
01:04:18 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (6.5.2)
01:04:18 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-virtual-microscope) (3.9.1)
01:04:18 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-virtual-microscope) (0.5.3)
01:04:18 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (1.4.4)
01:04:18 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (1.0.0)
01:04:18 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.3.2)
01:04:18 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (6.0.2)
01:04:18 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.6.5)
01:04:18 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.32.5)
01:04:18 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-virtual-microscope) (80.9.0)
01:04:18 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-virtual-microscope) (0.45.1)
01:04:18 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.4.3)
01:04:18 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.10)
01:04:18 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (1.26.20)
01:04:18 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2025.8.3)
01:04:18 Building wheels for collected packages: omero-virtual-microscope
01:04:18 DEPRECATION: Building 'omero-virtual-microscope' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-virtual-microscope'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:04:18 Building wheel for omero-virtual-microscope (setup.py): started
01:04:18 Building wheel for omero-virtual-microscope (setup.py): finished with status 'done'
01:04:18 Created wheel for omero-virtual-microscope: filename=omero_virtual_microscope-1.1.2.dev0-py3-none-any.whl size=17375 sha256=54d35d5bcdb427cd6c7547028ae9af76150a2b764f88e79429c9f02ef9dd51e2
01:04:18 Stored in directory: /tmp/pip-ephem-wheel-cache-v405mp4q/wheels/0f/38/be/3c5aedfd619e2ce9f2ac800e8ad92e0b65117ebbf35f5b5bf6
01:04:18 Successfully built omero-virtual-microscope
01:04:18 Installing collected packages: omero-virtual-microscope
01:04:18 Successfully installed omero-virtual-microscope-1.1.2.dev0
01:04:18 + omero config append omero.web.apps '"virtualmicroscope"'
01:04:20 + omero config set omero.web.login_redirect '{"redirect": ["webindex"], "viewname": "webindex_custom"}'
01:04:21 + omero config append omero.web.apps '"corsheaders"'
01:04:22 + omero config append omero.web.middleware '{"index": 0.5, "class": "corsheaders.middleware.CorsMiddleware"}'
01:04:24 + omero config append omero.web.middleware '{"index": 10, "class": "corsheaders.middleware.CorsPostCsrfMiddleware"}'
01:04:25 + omero config set omero.web.cors_origin_allow_all True
01:04:27 + omero config append omero.web.csrf_trusted_origins '"https://merge-ci.openmicroscopy.org"'
01:04:28 + omero config set omero.web.sharing.opengraph '{"omero":"Open Microscopy"}'
01:04:30 + omero config set omero.web.sharing.twitter '{"omero":"@openmicroscopy"}'
01:04:31 + omero config set omero.web.public.enabled true
01:04:33 + omero config set omero.web.public.user public
01:04:34 + omero config set omero.web.public.password public
01:04:36 + omero config set omero.web.public.url_filter '^/'
01:04:37 + omero config set omero.web.feedback.comment.enabled false
01:04:39 + omero config set omero.web.feedback.error.enabled false
01:04:40 + BUILD_ID=DONT_KILL_ME
01:04:40 + omero web start
01:04:42
01:04:42 733 static files copied to '/home/omero/static/web', 2 post-processed.
01:04:42 Clearing expired sessions. This may take some time... [OK]
01:04:44 Starting OMERO.web... [OK]
01:04:44 + omero web diagnostics
01:04:45
01:04:45 ================================================================================
01:04:45 OMERO Diagnostics (web)
01:04:45 ================================================================================
01:04:45
01:04:45 OMERO.web status... [RUNNING] (PID 66201)
01:04:45 Django version: 4.2.23
01:04:45
01:04:45 Log dir: /home/omero/workspace/OMERO-web/OMERO.web/var/log exists
01:04:45 Log file : OMEROweb.log 2.5 KB
01:04:45 + deactivate
01:04:45 + '[' -n /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
01:04:45 + PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:04:45 + export PATH
01:04:45 + unset _OLD_VIRTUAL_PATH
01:04:45 + '[' -n '' ']'
01:04:45 + hash -r
01:04:45 + '[' -n '' ']'
01:04:45 + unset VIRTUAL_ENV
01:04:45 + unset VIRTUAL_ENV_PROMPT
01:04:45 + '[' '!' '' = nondestructive ']'
01:04:45 + unset -f deactivate
01:04:45 Finished: SUCCESS
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