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Started by upstream project "Trigger" build number 689
originally caused by:
 Started by user devspace
Running as SYSTEM
Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /uod/idr-scratch/merge-ci
The recommended git tool is: NONE
No credentials specified
 > git rev-parse --resolve-git-dir /uod/idr-scratch/merge-ci/.git # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url git@github.com:openmicroscopy/data_repo_config.git # timeout=10
Fetching upstream changes from git@github.com:openmicroscopy/data_repo_config.git
 > git --version # timeout=10
 > git --version # 'git version 2.43.5'
 > git fetch --tags --force --progress -- git@github.com:openmicroscopy/data_repo_config.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
Checking out Revision c3b20927aca2c13a1afcc54e9fb2a5081ae6d1a1 (refs/remotes/origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f c3b20927aca2c13a1afcc54e9fb2a5081ae6d1a1 # timeout=10
Commit message: "Merge pull request #700 from melissalinkert/gh-4297"
 > git rev-list --no-walk c3b20927aca2c13a1afcc54e9fb2a5081ae6d1a1 # timeout=10
[merge-ci] $ /bin/bash -xe /tmp/jenkins11841062376000676808.sh
+ python3 -mvenv /tmp/venv
+ source /tmp/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/tmp/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/tmp/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ /tmp/venv/bin/pip install -U pip
Requirement already satisfied: pip in /tmp/venv/lib/python3.9/site-packages (21.3.1)
Collecting pip
  Using cached pip-25.3-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
  Attempting uninstall: pip
    Found existing installation: pip 21.3.1
    Uninstalling pip-21.3.1:
      Successfully uninstalled pip-21.3.1
Successfully installed pip-25.3
+ /tmp/venv/bin/pip install -U scc
Collecting scc
  Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
  Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
  Using cached pyyaml-6.0.3-cp39-cp39-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
Collecting future (from scc)
  Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
  Using cached ruamel.yaml-0.18.16-py3-none-any.whl.metadata (25 kB)
Collecting ruamel.yaml.jinja2 (from scc)
  Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
  Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3<2 (from scc)
  Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
  Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
  Using cached pynacl-1.6.1-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.8 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
  Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB)
Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc)
  Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached cryptography-46.0.3-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB)
Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached cffi-2.0.0-cp39-cp39-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB)
Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes)
Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached charset_normalizer-3.4.4-cp39-cp39-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Downloading certifi-2025.11.12-py3-none-any.whl.metadata (2.5 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
  Using cached ruamel.yaml.clib-0.2.14-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.0 kB)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached pygithub-2.8.1-py3-none-any.whl (432 kB)
Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB)
Using cached cryptography-46.0.3-cp38-abi3-manylinux_2_34_x86_64.whl (4.5 MB)
Using cached cffi-2.0.0-cp39-cp39-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (216 kB)
Using cached pynacl-1.6.1-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB)
Using cached pyyaml-6.0.3-cp39-cp39-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (750 kB)
Using cached requests-2.32.5-py3-none-any.whl (64 kB)
Using cached charset_normalizer-3.4.4-cp39-cp39-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (153 kB)
Using cached idna-3.11-py3-none-any.whl (71 kB)
Downloading certifi-2025.11.12-py3-none-any.whl (159 kB)
Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached pycparser-2.23-py3-none-any.whl (118 kB)
Using cached ruamel.yaml-0.18.16-py3-none-any.whl (119 kB)
Using cached ruamel.yaml.clib-0.2.14-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (723 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc

Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2025.11.12 cffi-2.0.0 charset_normalizer-3.4.4 cryptography-46.0.3 future-1.0.0 idna-3.11 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.1 requests-2.32.5 ruamel.yaml-0.18.16 ruamel.yaml.clib-0.2.14 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0
+ test -e src
+ /tmp/venv/bin/scc merge master --no-ask --reset --comment --push merge_ci
2025-11-12 13:16:12,833 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-11-12 13:16:12,834 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-11-12 13:16:12,834 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-11-12 13:16:12,834 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-11-12 13:16:12,834 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-11-12 13:16:16,000 [   scc.merge] INFO  Repository: openmicroscopy/data_repo_config
2025-11-12 13:16:16,000 [   scc.merge] INFO  Already up to date.
2025-11-12 13:16:16,000 [   scc.merge] INFO  
2025-11-12 13:16:16,000 [   scc.merge] INFO  
2025-11-12 13:16:18,294 [   scc.merge] INFO  Merged branch pushed to https://github.com/snoopycrimecop/data_repo_config/tree/merge_ci
Finished: SUCCESS