18:22:04Started by user devspace18:22:04Running as SYSTEM
18:22:04Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
18:22:04The recommended git tool is: NONE
18:22:07No credentials specified
18:22:07 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
18:22:07Fetching changes from the remote Git repository
18:22:08 > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
18:22:08Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git18:22:08 > git --version # timeout=10
18:22:08 > git --version # 'git version 2.39.3'
18:22:08 > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
18:22:10 > git rev-parse origin/merge_ci^{commit} # timeout=10
18:22:10Checking out Revision 77df23582694bf421cab9067d65caa48a6788ea0 (origin/merge_ci)
18:22:10 > git config core.sparsecheckout # timeout=10
18:22:10 > git checkout -f 77df23582694bf421cab9067d65caa48a6788ea0 # timeout=10
18:22:11Commit message: "Add version.properties to etc/omero.properties"
18:22:11 > git rev-list --no-walk 77df23582694bf421cab9067d65caa48a6788ea0 # timeout=10
18:22:11Cleaning workspace
18:22:11 > git rev-parse --verify HEAD # timeout=10
18:22:11Resetting working tree
18:22:11 > git reset --hard # timeout=10
18:22:12 > git clean -fdx # timeout=10
18:22:12Copied 6 artifacts from "OMERO-python-superbuild-build" build number 17818:22:12[OMERO-build] $ /bin/bash -xe /tmp/jenkins7963159210706130507.sh
18:22:12+ mv omero-scripts/dist/omero_scripts-5.8.4.dev0.tar.gz .
18:22:12+ cd src
18:22:12+ export OMERO_BRANCH=merge_ci
18:22:12+ OMERO_BRANCH=merge_ci
18:22:12+ OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
18:22:12+ source /home/omero/settings.env
18:22:12++ OMERO_DB_HOST=pg
18:22:12++ OMERO_DB_USER=postgres
18:22:12++ OMERO_DB_PASS=
18:22:12++ OMERO_ROOT_PASS=omero
18:22:12++ OMERO_DATA_DIR=/OMERO
18:22:12++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
18:22:12+ python3 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
18:22:16+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl18:22:17Collecting zeroc-ice==3.6.5
18:22:18 Downloading https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl (31.3 MB)
18:22:20WARNING: You are using pip version 21.2.3; however, version 24.2 is available.
18:22:20You should consider upgrading via the '/home/omero/workspace/OMERO-build/omero-virtualenv/bin/python3 -m pip install --upgrade pip' command.
18:22:20+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U setuptools omero-py
18:22:20Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (75.1.0)
18:22:21Requirement already satisfied: omero-py in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (5.19.5)
18:22:21Requirement already satisfied: numpy<2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.26.4)
18:22:21Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (3.6.5)
18:22:21Requirement already satisfied: urllib3<2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.26.18)
18:22:21Requirement already satisfied: future in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.0.0)
18:22:21Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (2.8.2)
18:22:21Requirement already satisfied: requests in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (2.31.0)
18:22:21Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.4.4)
18:22:21Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (6.0.1)
18:22:21Requirement already satisfied: Pillow>=10.0.0 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (10.2.0)
18:22:22Requirement already satisfied: charset-normalizer<4,>=2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (3.3.2)
18:22:22Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (2024.2.2)
18:22:22Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (3.6)
18:22:22WARNING: You are using pip version 21.2.3; however, version 24.2 is available.
18:22:22You should consider upgrading via the '/home/omero/workspace/OMERO-build/omero-virtualenv/bin/python3 -m pip install --upgrade pip' command.
18:22:22+ source docs/hudson/OMERO.sh
18:22:22++ set -e
18:22:22++ set -u
18:22:22++ set -x
18:22:22++ source docs/hudson/functions.sh
18:22:22++ echo Building merge_ci
18:22:22Building merge_ci
18:22:22++ python3 ./build.py build-dev release-all
18:22:22OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
18:22:22Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
18:22:2318:22:23check-ivy:
18:22:23Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
18:22:23Created dir: /home/omero/workspace/OMERO-build/src/target
18:22:23:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
18:22:23:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
18:22:2418:22:24build-scons:
18:22:24Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
18:22:24No sub-builds to iterate on
18:22:24Entering /home/omero/workspace/OMERO-build/src/components/tools...
18:22:2418:22:24buildlist:
18:22:24:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
18:22:24:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
18:22:2418:22:24clean:
18:22:24Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
18:22:24Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
18:22:2518:22:25python-clean:
18:22:25WARNING: '' not a valid package name; please use only .-separated package names in setup.py
18:22:25/usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-508-77df235826-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
18:22:25 warnings.warn(
18:22:25running clean
18:22:25Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
18:22:25Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
18:22:2618:22:26python-clean:
18:22:26WARNING: '' not a valid package name; please use only .-separated package names in setup.py
18:22:26/usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-508-77df235826-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
18:22:26 warnings.warn(
18:22:26running clean
18:22:26Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
18:22:26Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
18:22:26Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
18:22:26Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
18:22:2618:22:26python-clean:
18:22:26WARNING: '' not a valid package name; please use only .-separated package names in setup.py
18:22:26/usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-508-77df235826-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
18:22:26 warnings.warn(
18:22:26running clean
18:22:26Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
18:22:26Deleting directory /home/omero/workspace/OMERO-build/src/target
18:22:2618:22:26build-scons:
18:22:26Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
18:22:2618:22:26build:
18:22:26No sub-builds to iterate on
18:22:26Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
18:22:26Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
18:22:26Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
18:22:26Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
18:22:2618:22:26tools-init:
18:22:26no-op
18:22:2618:22:26retrieve:
18:22:26:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
18:22:26:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
18:22:27WARNING: An illegal reflective access operation has occurred
18:22:27WARNING: Illegal reflective access by org.apache.ivy.util.url.IvyAuthenticator (file:/home/omero/workspace/OMERO-build/src/lib/repository/ivy-2.4.0.jar) to field java.net.Authenticator.theAuthenticator
18:22:27WARNING: Please consider reporting this to the maintainers of org.apache.ivy.util.url.IvyAuthenticator
18:22:27WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
18:22:27WARNING: All illegal access operations will be denied in a future release
18:23:1618:23:16prepare:
18:23:16Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
18:23:16Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
18:23:16Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
18:23:16Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
18:23:16Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
18:23:16Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
18:23:16Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
18:23:16Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
18:23:16Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
18:23:16Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
18:23:16Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
18:23:16Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
18:23:16Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
18:23:16Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
18:23:16Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
18:23:1618:23:16pre-compile:
18:23:16Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
18:23:16Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
18:23:16Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
18:23:16Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
18:23:16Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
18:23:1618:23:16compile:
18:23:16no-op
18:23:1618:23:16package:
18:23:16Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
18:23:1618:23:16install:
18:23:16:: delivering :: omero#omero_client;working@83c9dfd0c7fb :: 5.6.3-508-77df235826-ice36 :: integration :: Thu Sep 19 18:22:26 UTC 2024
18:23:16 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
18:23:16:: publishing :: omero#omero_client
18:23:16 published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-508-77df235826-ice36/omero_client-5.6.3-508-77df235826-ice36.jar
18:23:16 published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-508-77df235826-ice36/omero_client-5.6.3-508-77df235826-ice36.xml
18:23:16Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
18:23:16Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
18:23:1718:23:17retrieve:
18:23:17:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
18:23:17:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
18:23:17Entering /home/omero/workspace/OMERO-build/src/components/tools...
18:23:1718:23:17dist:
18:23:17Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
18:23:17Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
18:23:17Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
18:23:17Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.8.4.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
18:23:17Copying 28 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
18:23:17Copying 28 files to /home/omero/workspace/OMERO-build/src/dist
18:23:17Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
18:23:17Entering /home/omero/workspace/OMERO-build/src/components/tests...
18:23:17Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
18:23:1718:23:17copy-licenses:
18:23:17Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
18:23:17Created dir: /home/omero/workspace/OMERO-build/src/dist/share
18:23:17Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
18:23:1718:23:17copy-history:
18:23:17Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
18:23:1718:23:17copy-etc:
18:23:17Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
18:23:17Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
18:23:1718:23:17copy-sql:
18:23:17Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
18:23:2618:23:26copy-server:
18:23:26 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/janino.jar in [server]: 3.0.11 won
18:23:2618:23:26copy-client:
18:23:26Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/client
18:23:27 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/janino.jar in [client]: 3.0.11 won
18:23:2718:23:27update-version:
18:23:27Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc
18:23:2718:23:27create-workdirs:
18:23:27Created dir: /home/omero/workspace/OMERO-build/src/dist/etc/grid
18:23:27Created dir: /home/omero/workspace/OMERO-build/src/dist/var
18:23:2718:23:27copy-luts:
18:23:27Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
18:23:27Copying 39 files to /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
18:23:2718:23:27test-compile:
18:23:27:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
18:23:27Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
18:23:27Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
18:23:27Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
18:23:27Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
18:23:27Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
18:23:27Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
18:23:27Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
18:23:2818:23:28testng-init:
18:23:28:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
18:23:28:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
18:23:3118:23:30,981 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
18:23:3118:23:30,984 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2bc41bcb - No custom configurators were discovered as a service.
18:23:3118:23:30,984 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2bc41bcb - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
18:23:3118:23:30,987 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2bc41bcb - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
18:23:3118:23:30,988 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
18:23:3118:23:30,988 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
18:23:3118:23:30,989 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2bc41bcb - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
18:23:3118:23:30,989 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2bc41bcb - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
18:23:3118:23:30,990 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2bc41bcb - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
18:23:3118:23:30,991 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
18:23:3118:23:30,991 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
18:23:3118:23:30,992 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@354aaf03 - Resource [logback.xml] occurs multiple times on the classpath.
18:23:3118:23:30,992 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@354aaf03 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
18:23:3118:23:30,992 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@354aaf03 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
18:23:3118:23:31,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
18:23:3118:23:31,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
18:23:3118:23:31,218 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
18:23:3118:23:31,220 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@63e31b89 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
18:23:3118:23:31,220 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@63e31b89 - Please move "immediateFlush" property into the enclosing appender.
18:23:3118:23:31,291 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@63e31b89 - Setting the "immediateFlush" property of the enclosing appender to true
18:23:3118:23:31,292 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
18:23:3118:23:31,292 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
18:23:3118:23:31,292 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
18:23:3118:23:31,292 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
18:23:3118:23:31,292 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
18:23:3118:23:31,292 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
18:23:3118:23:31,293 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@42141c59 - End of configuration.
18:23:3118:23:31,295 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@49854d93 - Registering current configuration as safe fallback point
18:23:3118:23:31,295 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2bc41bcb - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 305 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
18:23:3118:23:31lifecycle.test-compile:
18:23:31Copying 3 files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
18:23:31Compiling 85 source files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
18:23:32warning: [options] bootstrap class path not set in conjunction with -source 8
18:23:33/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
18:23:33import omero.grid.RawAccessRequest;
18:23:33 ^
18:23:34/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
18:23:34import omero.grid.RawAccessRequest;
18:23:34 ^
18:23:34/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
18:23:34import omero.grid.RawAccessRequest;
18:23:34 ^
18:23:34/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
18:23:34import omero.model.ImportJob;
18:23:34 ^
18:23:34/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
18:23:34import omero.model.ImportJobI;
18:23:34 ^
18:23:34/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1206: warning: [deprecation] newInstance() in Class has been deprecated
18:23:34 IObject link = (IObject) linkClass.newInstance();
18:23:34 ^
18:23:34 where T is a type-variable:
18:23:34 T extends Object declared in class Class
18:23:35/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
18:23:35 T copy = (T) obj.getClass().newInstance();
18:23:35 ^
18:23:35 where T is a type-variable:
18:23:35 T extends Object declared in class Class
18:23:35/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
18:23:35 RawAccessRequest raw = new RawAccessRequest();
18:23:35 ^
18:23:35/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
18:23:35 RawAccessRequest raw = new RawAccessRequest();
18:23:35 ^
18:23:35/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
18:23:35 raw.repoUuid = legacy.root().getHash().getValue();
18:23:35 ^
18:23:35/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
18:23:35 raw.command = "rm";
18:23:35 ^
18:23:35/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
18:23:35 raw.args = Arrays.asList(path);
18:23:35 ^
18:23:35/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
18:23:35 final IObject link = linkClass.newInstance();
18:23:35 ^
18:23:35 where T is a type-variable:
18:23:35 T extends Object declared in class Class
18:23:35/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
18:23:35 originalLink.setChild(annotationClass.newInstance());
18:23:35 ^
18:23:35 where T is a type-variable:
18:23:35 T extends Object declared in class Class
18:23:35/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
18:23:35 RoiResult r = svc.findByImage(id, new RoiOptions());
18:23:35 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
18:23:36 final RawAccessRequest request = new RawAccessRequest();
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
18:23:36 final RawAccessRequest request = new RawAccessRequest();
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
18:23:36 request.repoUuid = repo.root().getHash().getValue();
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
18:23:36 request.command = "exists";
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
18:23:36 request.args = Collections.singletonList(dirPath);
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
18:23:36 final RawAccessRequest request = new RawAccessRequest();
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
18:23:36 final RawAccessRequest request = new RawAccessRequest();
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
18:23:36 request.repoUuid = repo.root().getHash().getValue();
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
18:23:36 request.command = "exists";
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
18:23:36 request.args = Collections.singletonList(dirName);
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
18:23:36 final ImportJob importJob = new ImportJobI();
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
18:23:36 final ImportJob importJob = new ImportJobI();
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
18:23:36 importJob.setImageName(omero.rtypes.rstring(name));
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
18:23:36 importJob.setImageDescription(omero.rtypes.rstring(desc));
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
18:23:36 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
18:23:36 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
18:23:36 final String savedName = sent.getImageName().getValue().toString();
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
18:23:36 final String savedDesc = sent.getImageDescription().getValue().toString();
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
18:23:36 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
18:23:36 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
18:23:36 final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
18:23:36 final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
18:23:36 RoiResult r = svc.findByImage(image.getId().getValue(),
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
18:23:36 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
18:23:36 l = svc.getRoiMeasurements(image.getId().getValue(), options);
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
18:23:36 l = svc.getRoiMeasurements(image.getId().getValue(), options);
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
18:23:36 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
18:23:36 Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
18:23:36 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
18:23:36 table = svc.getTable(f.getId().getValue());
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
18:23:36 RoiResult r = svc.findByImage(image.getId().getValue(),
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
18:23:36 r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
18:23:36 r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
18:23:36 r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
18:23:36 r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
18:23:36 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
18:23:36 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
18:23:36 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
18:23:36 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Long(long) in Long has been deprecated
18:23:36 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
18:23:36 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
18:23:36 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
18:23:36 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
18:23:36 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
18:23:36 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
18:23:36 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
18:23:36 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
18:23:36 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
18:23:36 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
18:23:36 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
18:23:36 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
18:23:36 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
18:23:36 svc.getShapeStatsRestricted(
18:23:36 ^
18:23:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
18:23:36 final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
18:23:36 ^
18:23:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
18:23:37 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
18:23:37 ^
18:23:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
18:23:37 request.typesToIgnore = Collections.singletonList("TagAnnotation");
18:23:37 ^
18:23:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
18:23:37 request.typesToIgnore = Collections.singletonList("IAnnotationLink");
18:23:37 ^
18:23:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
18:23:37 request.typesToIgnore = Collections.singletonList("Annotation");
18:23:37 ^
18:23:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
18:23:37 request.typesToIgnore = Collections.singletonList("Annotation");
18:23:37 ^
18:23:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
18:23:37 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
18:23:37 ^
18:23:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
18:23:37 p2.setRelatedTo(p1);
18:23:37 ^
18:23:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
18:23:37 Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
18:23:37 ^
18:23:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
18:23:37 pixels1.setRelatedTo(pixels2);
18:23:37 ^
18:23:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
18:23:37 Pixels pixels = pixels1.getRelatedTo();
18:23:37 ^
18:23:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
18:23:37 Assert.assertNull(pixels1.getRelatedTo());
18:23:37 ^
18:23:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
18:23:37 pixels1.setRelatedTo(pixels2);
18:23:37 ^
18:23:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
18:23:37 Pixels pixels = pixels1.getRelatedTo();
18:23:37 ^
18:23:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
18:23:37 Assert.assertNull(pixels1.getRelatedTo());
18:23:37 ^
18:23:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
18:23:37 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
18:23:37 ^
18:23:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
18:23:37 l = svc.getRoiMeasurements(image.getId().getValue(), options);
18:23:37 ^
18:23:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
18:23:37 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
18:23:37 ^
18:23:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
18:23:37 l = svc.getRoiMeasurements(image.getId().getValue(), options);
18:23:37 ^
18:23:37Note: Some input files use unchecked or unsafe operations.
18:23:37Note: Recompile with -Xlint:unchecked for details.
18:23:3788 warnings
18:23:37Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/_omero_build_532291340.tmp
18:23:37Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.jar
18:23:37:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
18:23:37:: delivering :: omero#OmeroJava-test;working@83c9dfd0c7fb :: 5.6.3-508-77df235826-ice36 :: integration :: Thu Sep 19 18:23:27 UTC 2024
18:23:37 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.xml
18:23:37:: publishing :: omero#OmeroJava-test
18:23:37 published OmeroJava-test to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-508-77df235826-ice36.jar
18:23:37 published ivy to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-508-77df235826-ice36.xml
18:23:3718:23:37build-eclipse:
18:23:37No sub-builds to iterate on
18:23:37Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
18:23:3718:23:37retrieve:
18:23:37:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
18:23:37:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
18:23:4018:23:40prepare:
18:23:40Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
18:23:4418:23:44release-clients:
18:23:44Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.java-5.6.3-508-77df235826-ice36.zip
18:23:5018:23:50release-zip:
18:23:50Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.server-5.6.3-508-77df235826-ice36.zip
18:24:0118:24:01BUILD SUCCESSFUL
18:24:01Total time: 1 minute 39 seconds
18:24:01++ '[' -d .git ']'
18:24:01++ python3 ./build.py release-src
18:24:01OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
18:24:01Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
18:24:0218:24:02release-src-git:
18:24:02Releasing openmicroscopy-5.6.3-508-77df235826-ice36
18:24:03 - creating /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-508-77df235826-ice36.zip
18:24:03 - repacking /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-508-77df235826-ice36-base.zip
18:24:0518:24:05BUILD SUCCESSFUL
18:24:05Total time: 3 seconds
18:24:05++ echo BUILD_NUMBER=181
18:24:05++ echo OMERO_BRANCH=merge_ci
18:24:05++ git_info
18:24:05+++ git rev-parse HEAD
18:24:05++ HEAD=77df23582694bf421cab9067d65caa48a6788ea0
18:24:05++ git log --max-count=1 77df23582694bf421cab9067d65caa48a6788ea0
18:24:05++ env
18:24:05++ sort
18:24:05Archiving artifacts
18:24:33Finished: SUCCESS
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