Console Output
+ export BASE_REPO=omero-insight.git
+ BASE_REPO=omero-insight.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-insight-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-insight-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-05-06 01:02:48,697 [ scc.config] DEBUG Found github.token
2024-05-06 01:02:48,701 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-05-06 01:02:48,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-06 01:02:49,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-06 01:02:49,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-05-06 01:02:49,770 [ scc.gh] DEBUG 2775 remaining from 5000 (Reset at 01:05
2024-05-06 01:02:49,771 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-06 01:02:49,776 [ scc.git] DEBUG Check current status
2024-05-06 01:02:49,776 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-06 01:02:49,781 [ scc.git] DEBUG 558b56cf6 Merge pull request #422 from jburel/issue_421
2024-05-06 01:02:49,781 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-06 01:02:49,830 [ scc.config] DEBUG Found remote.origin.url
2024-05-06 01:02:50,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None
2024-05-06 01:02:50,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-06 01:02:51,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-06 01:02:51,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-06 01:02:51,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-06 01:02:51,935 [ scc.git] DEBUG Resetting...
2024-05-06 01:02:51,935 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-05-06 01:02:51,953 [ scc.git] DEBUG HEAD is now at 558b56cf6 Merge pull request #422 from jburel/issue_421
2024-05-06 01:02:51,954 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-05-06 01:02:51,994 [ scc.git] DEBUG Check current status
2024-05-06 01:02:51,994 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-06 01:02:51,999 [ scc.git] DEBUG 558b56cf6 Merge pull request #422 from jburel/issue_421
2024-05-06 01:02:51,999 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-06 01:02:52,037 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-05-06 01:02:52,037 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-05-06 01:02:52,037 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-05-06 01:02:52,037 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-05-06 01:02:52,037 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-05-06 01:02:52,037 [ scc.repo] DEBUG ## PRs found:
2024-05-06 01:02:52,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None
2024-05-06 01:02:52,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/437 HTTP/1.1" 200 None
2024-05-06 01:02:53,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436 HTTP/1.1" 200 None
2024-05-06 01:02:53,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436/comments HTTP/1.1" 200 None
2024-05-06 01:02:53,931 [ scc.repo] DEBUG - PR 436 dominikl 'Update apache common libs'
2024-05-06 01:02:54,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/427 HTTP/1.1" 200 None
2024-05-06 01:02:54,407 [ scc.repo] DEBUG - PR 427 dominikl 'Handle out of space'
2024-05-06 01:02:54,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/416 HTTP/1.1" 200 None
2024-05-06 01:02:55,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/416/comments HTTP/1.1" 200 None
2024-05-06 01:02:55,387 [ scc.repo] DEBUG - PR 416 jburel 'Prep 5.8.4'
2024-05-06 01:02:55,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385 HTTP/1.1" 200 None
2024-05-06 01:02:56,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385/comments HTTP/1.1" 200 None
2024-05-06 01:02:56,305 [ scc.repo] DEBUG - PR 385 jburel 'handle case where ROI is not longer in table'
2024-05-06 01:02:56,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333 HTTP/1.1" 200 None
2024-05-06 01:02:57,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333/comments HTTP/1.1" 200 None
2024-05-06 01:02:57,212 [ scc.repo] DEBUG - PR 333 jburel 'drop compatibility to test new Jenkins'
2024-05-06 01:02:57,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310 HTTP/1.1" 200 None
2024-05-06 01:02:58,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310/comments HTTP/1.1" 200 None
2024-05-06 01:02:58,307 [ scc.repo] DEBUG ## Branches found:
2024-05-06 01:02:58,308 [ scc.git] DEBUG Get sha1 of %s
2024-05-06 01:02:58,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-06 01:02:58,318 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-06 01:02:58,322 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-06 01:02:58,322 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-06 01:02:58,327 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-06 01:02:58,334 [ scc.git] DEBUG Already up to date.
2024-05-06 01:02:58,334 [ scc.git] DEBUG Calling 'git fetch origin pull/333/head'
2024-05-06 01:02:58,817 [ scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-06 01:02:58,817 [ scc.git] DEBUG * branch refs/pull/333/head -> FETCH_HEAD
2024-05-06 01:02:58,823 [ scc.git] DEBUG Calling 'git fetch origin pull/385/head'
2024-05-06 01:02:59,311 [ scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-06 01:02:59,311 [ scc.git] DEBUG * branch refs/pull/385/head -> FETCH_HEAD
2024-05-06 01:02:59,317 [ scc.git] DEBUG Calling 'git fetch origin pull/416/head'
2024-05-06 01:02:59,780 [ scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-06 01:02:59,780 [ scc.git] DEBUG * branch refs/pull/416/head -> FETCH_HEAD
2024-05-06 01:02:59,786 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-05-06 01:03:00,245 [ scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-06 01:03:00,245 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-05-06 01:03:00,251 [ scc.git] DEBUG Calling 'git fetch origin pull/436/head'
2024-05-06 01:03:00,641 [ scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-06 01:03:00,641 [ scc.git] DEBUG * branch refs/pull/436/head -> FETCH_HEAD
2024-05-06 01:03:00,647 [ scc.git] DEBUG ## Unique users: []
2024-05-06 01:03:00,648 [ scc.git] DEBUG Get sha1 of %s
2024-05-06 01:03:00,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-06 01:03:00,652 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b66e93349e2ddb5c1908f922c7c63a46722bd48e'
2024-05-06 01:03:00,659 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-06 01:03:00,663 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 333 (drop compatibility to test new Jenkins) b66e93349e2ddb5c1908f922c7c63a46722bd48e'
2024-05-06 01:03:00,689 [ scc.git] DEBUG Auto-merging build.gradle
2024-05-06 01:03:00,692 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-06 01:03:00,696 [ scc.git] DEBUG build.gradle | 8 ++++----
2024-05-06 01:03:00,696 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 4 deletions(-)
2024-05-06 01:03:00,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-06 01:03:00,867 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9466472925265b0b02b7c054c55d62705a9b8215'
2024-05-06 01:03:00,874 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-06 01:03:00,880 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 385 (handle case where ROI is not longer in table) 9466472925265b0b02b7c054c55d62705a9b8215'
2024-05-06 01:03:00,945 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-06 01:03:00,949 [ scc.git] DEBUG .../shoola/agents/measurement/view/ServerROITable.java | 13 ++++++++++---
2024-05-06 01:03:00,949 [ scc.git] DEBUG 1 file changed, 10 insertions(+), 3 deletions(-)
2024-05-06 01:03:01,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-06 01:03:01,295 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb813764c4f20bfc2cfc8ab22c027298ef628549'
2024-05-06 01:03:01,303 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-06 01:03:01,307 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 416 (Prep 5.8.4) eb813764c4f20bfc2cfc8ab22c027298ef628549'
2024-05-06 01:03:01,376 [ scc.git] DEBUG Auto-merging build.gradle
2024-05-06 01:03:01,380 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-06 01:03:01,384 [ scc.git] DEBUG CHANGELOG.md | 17 +++++++++++++++++
2024-05-06 01:03:01,384 [ scc.git] DEBUG build.gradle | 6 +++---
2024-05-06 01:03:01,384 [ scc.git] DEBUG 2 files changed, 20 insertions(+), 3 deletions(-)
2024-05-06 01:03:01,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-06 01:03:01,697 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f84dda5c47084c7416e01e6ecca8fede1f92defe'
2024-05-06 01:03:01,704 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-06 01:03:01,708 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 427 (Handle out of space) f84dda5c47084c7416e01e6ecca8fede1f92defe'
2024-05-06 01:03:01,754 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-06 01:03:01,762 [ scc.git] DEBUG .../shoola/env/data/ConnectionExceptionHandler.java | 8 +++++++-
2024-05-06 01:03:01,762 [ scc.git] DEBUG .../shoola/env/data/DataServicesFactory.java | 11 +++++++++--
2024-05-06 01:03:01,762 [ scc.git] DEBUG .../openmicroscopy/shoola/env/data/OMEROGateway.java | 18 +++++++++++++-----
2024-05-06 01:03:01,762 [ scc.git] DEBUG .../org/openmicroscopy/shoola/env/ui/TaskBarView.java | 4 ++--
2024-05-06 01:03:01,762 [ scc.git] DEBUG 4 files changed, 31 insertions(+), 10 deletions(-)
2024-05-06 01:03:02,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-06 01:03:02,120 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e43ef9b64e4734d327b92745588603a350b420c9'
2024-05-06 01:03:02,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-06 01:03:02,131 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 436 (Update apache common libs) e43ef9b64e4734d327b92745588603a350b420c9'
2024-05-06 01:03:02,177 [ scc.git] DEBUG Auto-merging build.gradle
2024-05-06 01:03:02,180 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-06 01:03:02,183 [ scc.git] DEBUG build.gradle | 3 ++-
2024-05-06 01:03:02,183 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 1 deletion(-)
2024-05-06 01:03:02,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-06 01:03:02,561 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-06 01:03:02,602 [ scc.git] DEBUG Get sha1 of %s
2024-05-06 01:03:02,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-06 01:03:02,607 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-06 01:03:02,688 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f047ff80460> has no local changes
2024-05-06 01:03:02,689 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-insight
Excluded PRs:
- PR 437 dominikl 'Remove apache commons io' (stage: draft)
- PR 377 sukunis 'Fix ontology loads' (exclude comment)
- PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
Already up to date.
Merged PRs:
- PR 333 jburel 'drop compatibility to test new Jenkins'
- PR 385 jburel 'handle case where ROI is not longer in table'
- PR 416 jburel 'Prep 5.8.4'
- PR 427 dominikl 'Handle out of space'
- PR 436 dominikl 'Update apache common libs'
Generated by OMERO-insight-push#51 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/51/)'
2024-05-06 01:03:02,804 [ scc.git] DEBUG [detached HEAD 883e5c796] merge master -Dorg -Snone
2024-05-06 01:03:02,804 [ scc.merge] INFO Repository: ome/omero-insight
2024-05-06 01:03:02,804 [ scc.merge] INFO Excluded PRs:
2024-05-06 01:03:02,804 [ scc.merge] INFO - PR 437 dominikl 'Remove apache commons io' (stage: draft)
2024-05-06 01:03:02,804 [ scc.merge] INFO - PR 377 sukunis 'Fix ontology loads' (exclude comment)
2024-05-06 01:03:02,804 [ scc.merge] INFO - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
2024-05-06 01:03:02,804 [ scc.merge] INFO Already up to date.
2024-05-06 01:03:02,804 [ scc.merge] INFO
2024-05-06 01:03:02,804 [ scc.merge] INFO Merged PRs:
2024-05-06 01:03:02,804 [ scc.merge] INFO - PR 333 jburel 'drop compatibility to test new Jenkins'
2024-05-06 01:03:02,804 [ scc.merge] INFO - PR 385 jburel 'handle case where ROI is not longer in table'
2024-05-06 01:03:02,804 [ scc.merge] INFO - PR 416 jburel 'Prep 5.8.4'
2024-05-06 01:03:02,804 [ scc.merge] INFO - PR 427 dominikl 'Handle out of space'
2024-05-06 01:03:02,804 [ scc.merge] INFO - PR 436 dominikl 'Update apache common libs'
2024-05-06 01:03:02,804 [ scc.merge] INFO
2024-05-06 01:03:02,804 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-05-06 01:03:02,805 [ scc.git] DEBUG Calling 'git remote'
Merge all submodules2024-05-06 01:03:03,296 [ scc.config] DEBUG Found github.token
2024-05-06 01:03:03,299 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-05-06 01:03:03,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-06 01:03:03,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-06 01:03:04,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-05-06 01:03:04,382 [ scc.gh] DEBUG 2742 remaining from 5000 (Reset at 01:05
2024-05-06 01:03:04,383 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-06 01:03:04,387 [ scc.git] DEBUG Check current status
2024-05-06 01:03:04,388 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-06 01:03:04,392 [ scc.git] DEBUG 883e5c796 merge master -Dorg -Snone
2024-05-06 01:03:04,392 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-06 01:03:04,437 [ scc.config] DEBUG Found remote.origin.url
2024-05-06 01:03:04,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None
2024-05-06 01:03:05,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-06 01:03:05,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-06 01:03:06,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-06 01:03:06,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-06 01:03:06,564 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-06 01:03:06,607 [ scc.git] DEBUG Resetting...
2024-05-06 01:03:06,607 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-05-06 01:03:06,625 [ scc.git] DEBUG HEAD is now at 883e5c796 merge master -Dorg -Snone
2024-05-06 01:03:06,626 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-05-06 01:03:06,669 [ scc.git] DEBUG Check current status
2024-05-06 01:03:06,669 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-06 01:03:06,674 [ scc.git] DEBUG 883e5c796 merge master -Dorg -Snone
2024-05-06 01:03:06,674 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-06 01:03:06,715 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-05-06 01:03:06,715 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-05-06 01:03:06,715 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-05-06 01:03:06,715 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-05-06 01:03:06,715 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-05-06 01:03:06,715 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-05-06 01:03:06,715 [ scc.repo] DEBUG ## PRs found:
2024-05-06 01:03:07,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None
2024-05-06 01:03:07,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/437 HTTP/1.1" 200 None
2024-05-06 01:03:08,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436 HTTP/1.1" 200 None
2024-05-06 01:03:08,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436/comments HTTP/1.1" 200 None
2024-05-06 01:03:09,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/e43ef9b64e4734d327b92745588603a350b420c9 HTTP/1.1" 200 None
2024-05-06 01:03:09,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/e43ef9b64e4734d327b92745588603a350b420c9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-06 01:03:10,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/e43ef9b64e4734d327b92745588603a350b420c9/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-06 01:03:10,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/e43ef9b64e4734d327b92745588603a350b420c9 HTTP/1.1" 200 None
2024-05-06 01:03:10,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/e43ef9b64e4734d327b92745588603a350b420c9?per_page=1 HTTP/1.1" 200 None
2024-05-06 01:03:11,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/e43ef9b64e4734d327b92745588603a350b420c9 HTTP/1.1" 200 None
2024-05-06 01:03:11,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/e43ef9b64e4734d327b92745588603a350b420c9/status HTTP/1.1" 200 None
2024-05-06 01:03:11,860 [ scc.repo] DEBUG - PR 436 dominikl 'Update apache common libs'
2024-05-06 01:03:12,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/427 HTTP/1.1" 200 None
2024-05-06 01:03:12,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f84dda5c47084c7416e01e6ecca8fede1f92defe HTTP/1.1" 200 None
2024-05-06 01:03:13,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f84dda5c47084c7416e01e6ecca8fede1f92defe/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-06 01:03:13,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f84dda5c47084c7416e01e6ecca8fede1f92defe/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-06 01:03:14,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f84dda5c47084c7416e01e6ecca8fede1f92defe HTTP/1.1" 200 None
2024-05-06 01:03:14,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/f84dda5c47084c7416e01e6ecca8fede1f92defe?per_page=1 HTTP/1.1" 200 None
2024-05-06 01:03:15,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f84dda5c47084c7416e01e6ecca8fede1f92defe HTTP/1.1" 200 None
2024-05-06 01:03:15,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f84dda5c47084c7416e01e6ecca8fede1f92defe/status HTTP/1.1" 200 None
2024-05-06 01:03:15,440 [ scc.repo] DEBUG - PR 427 dominikl 'Handle out of space'
2024-05-06 01:03:15,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/416 HTTP/1.1" 200 None
2024-05-06 01:03:16,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/416/comments HTTP/1.1" 200 None
2024-05-06 01:03:16,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/eb813764c4f20bfc2cfc8ab22c027298ef628549 HTTP/1.1" 200 None
2024-05-06 01:03:17,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/eb813764c4f20bfc2cfc8ab22c027298ef628549/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-06 01:03:17,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/eb813764c4f20bfc2cfc8ab22c027298ef628549/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-06 01:03:18,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/eb813764c4f20bfc2cfc8ab22c027298ef628549 HTTP/1.1" 200 None
2024-05-06 01:03:18,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/eb813764c4f20bfc2cfc8ab22c027298ef628549?per_page=1 HTTP/1.1" 200 None
2024-05-06 01:03:19,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/eb813764c4f20bfc2cfc8ab22c027298ef628549 HTTP/1.1" 200 None
2024-05-06 01:03:19,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/eb813764c4f20bfc2cfc8ab22c027298ef628549/status HTTP/1.1" 200 None
2024-05-06 01:03:19,755 [ scc.repo] DEBUG - PR 416 jburel 'Prep 5.8.4'
2024-05-06 01:03:20,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385 HTTP/1.1" 200 None
2024-05-06 01:03:20,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385/comments HTTP/1.1" 200 None
2024-05-06 01:03:21,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-05-06 01:03:21,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-06 01:03:22,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-06 01:03:22,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-05-06 01:03:23,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/9466472925265b0b02b7c054c55d62705a9b8215?per_page=1 HTTP/1.1" 200 None
2024-05-06 01:03:23,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-05-06 01:03:23,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/status HTTP/1.1" 200 None
2024-05-06 01:03:23,939 [ scc.repo] DEBUG - PR 385 jburel 'handle case where ROI is not longer in table'
2024-05-06 01:03:24,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333 HTTP/1.1" 200 None
2024-05-06 01:03:24,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333/comments HTTP/1.1" 200 None
2024-05-06 01:03:25,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/b66e93349e2ddb5c1908f922c7c63a46722bd48e HTTP/1.1" 200 None
2024-05-06 01:03:25,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/b66e93349e2ddb5c1908f922c7c63a46722bd48e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-06 01:03:26,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/b66e93349e2ddb5c1908f922c7c63a46722bd48e HTTP/1.1" 200 None
2024-05-06 01:03:26,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/b66e93349e2ddb5c1908f922c7c63a46722bd48e?per_page=1 HTTP/1.1" 200 2
2024-05-06 01:03:26,708 [ scc.repo] DEBUG - PR 333 jburel 'drop compatibility to test new Jenkins'
2024-05-06 01:03:27,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310 HTTP/1.1" 200 None
2024-05-06 01:03:27,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310/comments HTTP/1.1" 200 None
2024-05-06 01:03:27,699 [ scc.repo] DEBUG ## Branches found:
2024-05-06 01:03:27,700 [ scc.git] DEBUG Get sha1 of %s
2024-05-06 01:03:27,700 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-06 01:03:27,705 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-06 01:03:27,710 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-06 01:03:27,710 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-06 01:03:27,715 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-06 01:03:27,723 [ scc.git] DEBUG Already up to date.
2024-05-06 01:03:27,723 [ scc.git] DEBUG Calling 'git fetch origin pull/333/head'
2024-05-06 01:03:28,088 [ scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-06 01:03:28,088 [ scc.git] DEBUG * branch refs/pull/333/head -> FETCH_HEAD
2024-05-06 01:03:28,094 [ scc.git] DEBUG Calling 'git fetch origin pull/385/head'
2024-05-06 01:03:28,469 [ scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-06 01:03:28,469 [ scc.git] DEBUG * branch refs/pull/385/head -> FETCH_HEAD
2024-05-06 01:03:28,474 [ scc.git] DEBUG Calling 'git fetch origin pull/416/head'
2024-05-06 01:03:28,852 [ scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-06 01:03:28,852 [ scc.git] DEBUG * branch refs/pull/416/head -> FETCH_HEAD
2024-05-06 01:03:28,857 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-05-06 01:03:29,263 [ scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-06 01:03:29,264 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-05-06 01:03:29,269 [ scc.git] DEBUG Calling 'git fetch origin pull/436/head'
2024-05-06 01:03:29,640 [ scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-06 01:03:29,640 [ scc.git] DEBUG * branch refs/pull/436/head -> FETCH_HEAD
2024-05-06 01:03:29,646 [ scc.git] DEBUG ## Unique users: []
2024-05-06 01:03:29,646 [ scc.git] DEBUG Get sha1 of %s
2024-05-06 01:03:29,646 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-06 01:03:29,650 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b66e93349e2ddb5c1908f922c7c63a46722bd48e'
2024-05-06 01:03:29,656 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-06 01:03:29,659 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 333 (drop compatibility to test new Jenkins) b66e93349e2ddb5c1908f922c7c63a46722bd48e'
2024-05-06 01:03:29,664 [ scc.git] DEBUG Already up to date.
2024-05-06 01:03:29,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-06 01:03:29,829 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9466472925265b0b02b7c054c55d62705a9b8215'
2024-05-06 01:03:29,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-06 01:03:29,840 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 385 (handle case where ROI is not longer in table) 9466472925265b0b02b7c054c55d62705a9b8215'
2024-05-06 01:03:29,846 [ scc.git] DEBUG Already up to date.
2024-05-06 01:03:30,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-06 01:03:30,240 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb813764c4f20bfc2cfc8ab22c027298ef628549'
2024-05-06 01:03:30,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-06 01:03:30,250 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 416 (Prep 5.8.4) eb813764c4f20bfc2cfc8ab22c027298ef628549'
2024-05-06 01:03:30,255 [ scc.git] DEBUG Already up to date.
2024-05-06 01:03:30,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-06 01:03:30,653 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f84dda5c47084c7416e01e6ecca8fede1f92defe'
2024-05-06 01:03:30,659 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-06 01:03:30,662 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Handle out of space) f84dda5c47084c7416e01e6ecca8fede1f92defe'
2024-05-06 01:03:30,668 [ scc.git] DEBUG Already up to date.
2024-05-06 01:03:31,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-06 01:03:31,064 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e43ef9b64e4734d327b92745588603a350b420c9'
2024-05-06 01:03:31,071 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-06 01:03:31,075 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 436 (Update apache common libs) e43ef9b64e4734d327b92745588603a350b420c9'
2024-05-06 01:03:31,081 [ scc.git] DEBUG Already up to date.
2024-05-06 01:03:31,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-06 01:03:31,470 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-06 01:03:31,509 [ scc.git] DEBUG Get sha1 of %s
2024-05-06 01:03:31,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-06 01:03:31,513 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-06 01:03:31,551 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-06 01:03:31,563 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f583264d460> has no local changes
2024-05-06 01:03:31,563 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-insight
Excluded PRs:
- PR 437 dominikl 'Remove apache commons io' (stage: draft)
- PR 377 sukunis 'Fix ontology loads' (exclude comment)
- PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
Already up to date.
Merged PRs:
- PR 333 jburel 'drop compatibility to test new Jenkins'
- PR 385 jburel 'handle case where ROI is not longer in table'
- PR 416 jburel 'Prep 5.8.4'
- PR 427 dominikl 'Handle out of space'
- PR 436 dominikl 'Update apache common libs'
Generated by OMERO-insight-push#51 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/51/)'
2024-05-06 01:03:31,577 [ scc.git] DEBUG [detached HEAD c312f8dad] merge master -Dorg -Ssuccess-only
2024-05-06 01:03:31,577 [ scc.merge] INFO Repository: ome/omero-insight
2024-05-06 01:03:31,577 [ scc.merge] INFO Excluded PRs:
2024-05-06 01:03:31,577 [ scc.merge] INFO - PR 437 dominikl 'Remove apache commons io' (stage: draft)
2024-05-06 01:03:31,577 [ scc.merge] INFO - PR 377 sukunis 'Fix ontology loads' (exclude comment)
2024-05-06 01:03:31,577 [ scc.merge] INFO - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
2024-05-06 01:03:31,577 [ scc.merge] INFO Already up to date.
2024-05-06 01:03:31,577 [ scc.merge] INFO
2024-05-06 01:03:31,577 [ scc.merge] INFO Merged PRs:
2024-05-06 01:03:31,577 [ scc.merge] INFO - PR 333 jburel 'drop compatibility to test new Jenkins'
2024-05-06 01:03:31,577 [ scc.merge] INFO - PR 385 jburel 'handle case where ROI is not longer in table'
2024-05-06 01:03:31,577 [ scc.merge] INFO - PR 416 jburel 'Prep 5.8.4'
2024-05-06 01:03:31,577 [ scc.merge] INFO - PR 427 dominikl 'Handle out of space'
2024-05-06 01:03:31,577 [ scc.merge] INFO - PR 436 dominikl 'Update apache common libs'
2024-05-06 01:03:31,578 [ scc.merge] INFO
2024-05-06 01:03:31,578 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-05-06 01:03:31,578 [ scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.9.0 to 5.9.1-SNAPSHOT
Commit all component version changes
[detached HEAD 220ce1696] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
2024-05-06 01:03:38,085 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-insight/tree/merge_ci
![[Jenkins]](/jenkins/static/f5fa13f0/images/svgs/logo.svg){kind=logo}
