Console Output
Skipping 114 KB..
Full Log] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:45:13,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 00:45:13,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2024-12-03 00:45:14,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:45:14,006 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2024-12-03 00:45:14,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None
2024-12-03 00:45:14,481 [ scc.repo] DEBUG # ... Include label: dependencies
2024-12-03 00:45:15,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2024-12-03 00:45:15,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:45:16,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 00:45:16,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2024-12-03 00:45:16,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:45:16,998 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents'
2024-12-03 00:45:17,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None
2024-12-03 00:45:17,450 [ scc.repo] DEBUG # ... Include label: dependencies
2024-12-03 00:45:18,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2024-12-03 00:45:18,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:45:19,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 00:45:19,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2024-12-03 00:45:19,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:45:19,896 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2024-12-03 00:45:19,896 [ scc.repo] DEBUG ## Branches found:
2024-12-03 00:45:19,896 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-12-03 00:45:19,896 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:45:19,896 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:19,904 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 00:45:19,911 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 00:45:19,911 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 00:45:19,918 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 00:45:19,925 [ scc.git] DEBUG Already up to date.
2024-12-03 00:45:19,925 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head'
2024-12-03 00:45:20,264 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-03 00:45:20,264 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD
2024-12-03 00:45:20,269 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head'
2024-12-03 00:45:20,562 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-03 00:45:20,562 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD
2024-12-03 00:45:20,569 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head'
2024-12-03 00:45:20,850 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-03 00:45:20,850 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD
2024-12-03 00:45:20,855 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head'
2024-12-03 00:45:21,137 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-03 00:45:21,137 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD
2024-12-03 00:45:21,142 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head'
2024-12-03 00:45:21,439 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-03 00:45:21,439 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD
2024-12-03 00:45:21,444 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head'
2024-12-03 00:45:21,738 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-03 00:45:21,738 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD
2024-12-03 00:45:21,743 [ scc.git] DEBUG ## Unique users: []
2024-12-03 00:45:21,743 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:45:21,743 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:21,749 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2024-12-03 00:45:21,755 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:21,760 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2024-12-03 00:45:21,772 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 00:45:21,777 [ scc.git] DEBUG package-lock.json | 12 ++++++------
2024-12-03 00:45:21,778 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-)
2024-12-03 00:45:21,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:45:21,914 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b'
2024-12-03 00:45:21,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:21,927 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b'
2024-12-03 00:45:22,119 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-03 00:45:22,119 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 00:45:22,125 [ scc.git] DEBUG package-lock.json | 625 +++---------------------------------------------------
2024-12-03 00:45:22,125 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-)
2024-12-03 00:45:22,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:45:22,296 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2024-12-03 00:45:22,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:22,312 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2024-12-03 00:45:22,445 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-03 00:45:22,445 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2024-12-03 00:45:22,446 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-03 00:45:22,446 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-03 00:45:22,452 [ scc.git] DEBUG Calling 'git reset --hard 69ca0d0550687106a8dcc5aba975084c0685be8f'
2024-12-03 00:45:22,459 [ scc.git] DEBUG HEAD is now at 69ca0d0 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents)
2024-12-03 00:45:22,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:45:22,693 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2024-12-03 00:45:22,699 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2024-12-03 00:45:22,706 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#266](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
--conflicts
2024-12-03 00:45:22,711 [ scc.config] DEBUG Found github.token
2024-12-03 00:45:22,711 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts.
2024-12-03 00:45:22,711 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2024-12-03 00:45:22,717 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:22,723 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2024-12-03 00:45:22,752 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-03 00:45:22,752 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 00:45:22,758 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++-----
2024-12-03 00:45:22,758 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-)
2024-12-03 00:45:23,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:45:23,088 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c'
2024-12-03 00:45:23,143 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:23,149 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c'
2024-12-03 00:45:23,275 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-03 00:45:23,329 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 00:45:23,334 [ scc.git] DEBUG package-lock.json | 6 +++---
2024-12-03 00:45:23,335 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-)
2024-12-03 00:45:23,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:45:23,471 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2024-12-03 00:45:23,479 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:23,485 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2024-12-03 00:45:23,591 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-03 00:45:23,591 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2024-12-03 00:45:23,591 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-03 00:45:23,592 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-03 00:45:23,599 [ scc.git] DEBUG Calling 'git reset --hard 6089d58720dc9f33687fdcc830075b10602881c4'
2024-12-03 00:45:23,609 [ scc.git] DEBUG HEAD is now at 6089d58 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2024-12-03 00:45:23,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:45:23,898 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2024-12-03 00:45:23,906 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2024-12-03 00:45:23,913 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#266](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
--conflicts
2024-12-03 00:45:23,920 [ scc.config] DEBUG Found github.token
2024-12-03 00:45:23,920 [ scc.git] DEBUG Adding comment to issue #118.
2024-12-03 00:45:24,784 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 201 2394
2024-12-03 00:45:24,786 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-03 00:45:24,835 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:45:24,835 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:24,841 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 00:45:24,889 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 00:45:24,898 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f84f3290f40> has no local changes
2024-12-03 00:45:24,898 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Generated by OMERO-plugins-push#266 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/)'
2024-12-03 00:45:24,909 [ scc.git] DEBUG [detached HEAD d570806] merge master -Dorg -Ssuccess-only
2024-12-03 00:45:24,910 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:45:24,910 [ scc.repo] DEBUG ## PRs found:
2024-12-03 00:45:25,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2024-12-03 00:45:25,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None
2024-12-03 00:45:26,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None
2024-12-03 00:45:26,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2024-12-03 00:45:27,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2024-12-03 00:45:27,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-12-03 00:45:28,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:45:28,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 00:45:29,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-12-03 00:45:29,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:45:29,557 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2024-12-03 00:45:30,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2024-12-03 00:45:30,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2024-12-03 00:45:31,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-12-03 00:45:31,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:45:32,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 00:45:32,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-12-03 00:45:32,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:45:32,856 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2024-12-03 00:45:33,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2024-12-03 00:45:33,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2024-12-03 00:45:34,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-12-03 00:45:34,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:45:35,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-12-03 00:45:35,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:45:35,817 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2024-12-03 00:45:35,817 [ scc.repo] DEBUG ## Branches found:
2024-12-03 00:45:35,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-12-03 00:45:35,818 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:45:35,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:35,825 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 00:45:35,831 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 00:45:35,831 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 00:45:35,839 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 00:45:35,846 [ scc.git] DEBUG Already up to date.
2024-12-03 00:45:35,846 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2024-12-03 00:45:36,278 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-12-03 00:45:36,278 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2024-12-03 00:45:36,285 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2024-12-03 00:45:37,871 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-12-03 00:45:37,871 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2024-12-03 00:45:37,878 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2024-12-03 00:45:38,194 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-12-03 00:45:38,195 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2024-12-03 00:45:38,200 [ scc.git] DEBUG ## Unique users: []
2024-12-03 00:45:38,200 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:45:38,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:38,206 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-12-03 00:45:38,214 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:38,220 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-12-03 00:45:38,248 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2024-12-03 00:45:38,249 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 00:45:38,253 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2024-12-03 00:45:38,253 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2024-12-03 00:45:38,253 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2024-12-03 00:45:38,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:45:38,392 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2024-12-03 00:45:38,401 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:38,408 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2024-12-03 00:45:38,472 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2024-12-03 00:45:38,472 [ scc.git] DEBUG Auto-merging src/app/context.js
2024-12-03 00:45:38,472 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2024-12-03 00:45:38,472 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2024-12-03 00:45:38,472 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 00:45:38,477 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2024-12-03 00:45:38,477 [ scc.git] DEBUG src/app/context.js | 6 +-
2024-12-03 00:45:38,477 [ scc.git] DEBUG src/app/header.html | 5 +
2024-12-03 00:45:38,478 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2024-12-03 00:45:38,478 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2024-12-03 00:45:38,478 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2024-12-03 00:45:38,478 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2024-12-03 00:45:38,478 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2024-12-03 00:45:38,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:45:38,776 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2024-12-03 00:45:38,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:38,791 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2024-12-03 00:45:38,824 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2024-12-03 00:45:38,824 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 00:45:38,828 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2024-12-03 00:45:38,828 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2024-12-03 00:45:38,828 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2024-12-03 00:45:39,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:45:39,160 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-03 00:45:39,207 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:45:39,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:39,213 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 00:45:39,260 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 00:45:39,269 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f84f0215610> has no local changes
2024-12-03 00:45:39,269 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
Generated by OMERO-plugins-push#266 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/)'
2024-12-03 00:45:39,280 [ scc.git] DEBUG [detached HEAD 35d15ab] merge master -Dorg -Ssuccess-only
2024-12-03 00:45:39,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:45:39,281 [ scc.repo] DEBUG ## PRs found:
2024-12-03 00:45:39,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2024-12-03 00:45:40,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2024-12-03 00:45:40,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2024-12-03 00:45:41,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-12-03 00:45:41,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:45:42,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-12-03 00:45:42,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:45:42,649 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2024-12-03 00:45:42,649 [ scc.repo] DEBUG ## Branches found:
2024-12-03 00:45:42,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-12-03 00:45:42,650 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:45:42,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:42,657 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 00:45:42,664 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 00:45:42,664 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 00:45:42,672 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 00:45:42,680 [ scc.git] DEBUG Already up to date.
2024-12-03 00:45:42,681 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2024-12-03 00:45:43,023 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2024-12-03 00:45:43,023 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2024-12-03 00:45:43,028 [ scc.git] DEBUG ## Unique users: []
2024-12-03 00:45:43,029 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:45:43,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:43,035 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-12-03 00:45:43,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:43,062 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-12-03 00:45:43,075 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 00:45:43,078 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2024-12-03 00:45:43,078 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2024-12-03 00:45:43,078 [ scc.git] DEBUG requirements.txt | 2 +-
2024-12-03 00:45:43,078 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2024-12-03 00:45:43,078 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2024-12-03 00:45:43,078 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2024-12-03 00:45:43,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:45:43,220 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-03 00:45:43,278 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:45:43,278 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:43,285 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 00:45:43,330 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 00:45:43,336 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f84f0228bb0> has no local changes
2024-12-03 00:45:43,337 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Generated by OMERO-plugins-push#266 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/)'
2024-12-03 00:45:43,345 [ scc.git] DEBUG [detached HEAD cd47ad2] merge master -Dorg -Ssuccess-only
2024-12-03 00:45:43,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:45:43,346 [ scc.repo] DEBUG ## PRs found:
2024-12-03 00:45:43,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2024-12-03 00:45:44,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/89 HTTP/1.1" 200 None
2024-12-03 00:45:44,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175 HTTP/1.1" 200 None
2024-12-03 00:45:45,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:45:45,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 00:45:46,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175 HTTP/1.1" 200 None
2024-12-03 00:45:46,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/dfc227486da13c78bc278fc534e59b40cbc97175?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:45:46,731 [ scc.repo] DEBUG - PR 89 jburel 'Build'
2024-12-03 00:45:47,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2024-12-03 00:45:47,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2024-12-03 00:45:48,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-12-03 00:45:48,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:45:49,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-12-03 00:45:49,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:45:49,715 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-12-03 00:45:50,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2024-12-03 00:45:50,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2024-12-03 00:45:51,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-12-03 00:45:51,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:45:52,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-12-03 00:45:52,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:45:52,504 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-12-03 00:45:52,504 [ scc.repo] DEBUG ## Branches found:
2024-12-03 00:45:52,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-12-03 00:45:52,504 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:45:52,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:52,511 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 00:45:52,517 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 00:45:52,517 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 00:45:52,568 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 00:45:52,575 [ scc.git] DEBUG Already up to date.
2024-12-03 00:45:52,576 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2024-12-03 00:45:53,145 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-12-03 00:45:53,146 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2024-12-03 00:45:53,151 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2024-12-03 00:45:53,786 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-12-03 00:45:53,787 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2024-12-03 00:45:53,792 [ scc.git] DEBUG Calling 'git fetch origin pull/89/head'
2024-12-03 00:45:54,281 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-12-03 00:45:54,281 [ scc.git] DEBUG * branch refs/pull/89/head -> FETCH_HEAD
2024-12-03 00:45:54,288 [ scc.git] DEBUG ## Unique users: []
2024-12-03 00:45:54,288 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:45:54,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:54,306 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-12-03 00:45:54,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:54,321 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-12-03 00:45:54,446 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2024-12-03 00:45:54,446 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2024-12-03 00:45:54,446 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-12-03 00:45:54,446 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-12-03 00:45:54,446 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-03 00:45:54,447 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-03 00:45:54,454 [ scc.git] DEBUG Calling 'git reset --hard fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-12-03 00:45:54,462 [ scc.git] DEBUG HEAD is now at fc20959 Bump version: 0.13.0 → 0.13.1.dev0
2024-12-03 00:45:54,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:45:54,606 [ scc.git] DEBUG Calling 'git merge-base fc2095901f5dfd24ecd29a99092283f136de04d5 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-12-03 00:45:54,615 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-12-03 00:45:54,657 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#266](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/cli.py
- src/omero_metadata/populate.py
--conflicts
2024-12-03 00:45:54,663 [ scc.config] DEBUG Found github.token
2024-12-03 00:45:54,663 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2024-12-03 00:45:54,663 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2024-12-03 00:45:54,671 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:54,677 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2024-12-03 00:45:54,707 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-12-03 00:45:54,707 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-12-03 00:45:54,707 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2024-12-03 00:45:54,707 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-03 00:45:54,708 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-03 00:45:54,715 [ scc.git] DEBUG Calling 'git reset --hard fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-12-03 00:45:54,724 [ scc.git] DEBUG HEAD is now at fc20959 Bump version: 0.13.0 → 0.13.1.dev0
2024-12-03 00:45:55,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:45:55,003 [ scc.git] DEBUG Calling 'git merge-base fc2095901f5dfd24ecd29a99092283f136de04d5 78e55539b68e351ed5ef202854718b49a37729a7'
2024-12-03 00:45:55,011 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-12-03 00:45:55,016 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#266](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2024-12-03 00:45:55,021 [ scc.config] DEBUG Found github.token
2024-12-03 00:45:55,021 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2024-12-03 00:45:55,021 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dfc227486da13c78bc278fc534e59b40cbc97175'
2024-12-03 00:45:55,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:55,031 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 89 (Build) dfc227486da13c78bc278fc534e59b40cbc97175'
2024-12-03 00:45:55,044 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 00:45:55,047 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-12-03 00:45:55,047 [ scc.git] DEBUG 1 file changed, 7 insertions(+), 5 deletions(-)
2024-12-03 00:45:55,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:45:55,399 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-03 00:45:55,446 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:45:55,447 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:55,453 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 00:45:55,503 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 00:45:55,511 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f84f01cf880> has no local changes
2024-12-03 00:45:55,511 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Already up to date.
Merged PRs:
- PR 89 jburel 'Build'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#266 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/)'
2024-12-03 00:45:55,526 [ scc.git] DEBUG [detached HEAD d15a3d4] merge master -Dorg -Ssuccess-only
2024-12-03 00:45:55,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:45:55,527 [ scc.repo] DEBUG ## PRs found:
2024-12-03 00:45:55,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2024-12-03 00:45:56,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2024-12-03 00:45:56,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2024-12-03 00:45:57,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2024-12-03 00:45:57,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2024-12-03 00:45:58,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2024-12-03 00:45:58,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2024-12-03 00:45:58,904 [ scc.repo] DEBUG ## Branches found:
2024-12-03 00:45:58,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-12-03 00:45:58,904 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:45:58,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:45:58,911 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 00:45:58,916 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 00:45:58,916 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 00:45:58,921 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 00:45:58,935 [ scc.git] DEBUG Updating 5d441c2..fb5ae86
2024-12-03 00:45:59,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/133 HTTP/1.1" 200 None
2024-12-03 00:46:00,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/129 HTTP/1.1" 200 None
2024-12-03 00:46:00,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/131 HTTP/1.1" 200 None
2024-12-03 00:46:01,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/128 HTTP/1.1" 200 None
2024-12-03 00:46:01,497 [ scc.git] DEBUG ## Unique users: []
2024-12-03 00:46:01,497 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:01,497 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:01,503 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-03 00:46:01,544 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:01,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:01,550 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 00:46:01,591 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 00:46:01,598 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f84f01cf670> has no local changes
2024-12-03 00:46:01,598 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Updating 5d441c2..fb5ae86
Previously merged:
- PR 133 jburel 'Build'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
Generated by OMERO-plugins-push#266 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/)'
2024-12-03 00:46:01,607 [ scc.git] DEBUG [detached HEAD 99f64fd] merge master -Dorg -Ssuccess-only
2024-12-03 00:46:01,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:46:01,608 [ scc.repo] DEBUG ## PRs found:
2024-12-03 00:46:01,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2024-12-03 00:46:02,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/15 HTTP/1.1" 200 None
2024-12-03 00:46:02,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332 HTTP/1.1" 200 None
2024-12-03 00:46:03,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:46:03,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 00:46:04,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None
2024-12-03 00:46:04,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-12-03 00:46:05,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:46:05,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-12-03 00:46:06,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:46:06,227 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel'
2024-12-03 00:46:06,228 [ scc.repo] DEBUG ## Branches found:
2024-12-03 00:46:06,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-12-03 00:46:06,228 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:06,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:06,234 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 00:46:06,240 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 00:46:06,240 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 00:46:06,246 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 00:46:06,252 [ scc.git] DEBUG Already up to date.
2024-12-03 00:46:06,252 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-12-03 00:46:06,575 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2024-12-03 00:46:06,576 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-12-03 00:46:06,581 [ scc.git] DEBUG ## Unique users: []
2024-12-03 00:46:06,581 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:06,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:06,588 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-12-03 00:46:06,594 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:06,599 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-12-03 00:46:06,607 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 00:46:06,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:46:06,754 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-03 00:46:06,794 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:06,795 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:06,800 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 00:46:06,840 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 00:46:06,846 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f84f0223cd0> has no local changes
2024-12-03 00:46:06,846 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Excluded PRs:
- PR 15 jburel 'Build' (status: failure)
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Generated by OMERO-plugins-push#266 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/)'
2024-12-03 00:46:06,855 [ scc.git] DEBUG [detached HEAD cab02f5] merge master -Dorg -Ssuccess-only
2024-12-03 00:46:06,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:46:06,856 [ scc.repo] DEBUG ## PRs found:
2024-12-03 00:46:07,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2024-12-03 00:46:07,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/29 HTTP/1.1" 200 None
2024-12-03 00:46:08,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-12-03 00:46:08,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:46:09,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-12-03 00:46:09,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24?per_page=1 HTTP/1.1" 200 None
2024-12-03 00:46:10,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-12-03 00:46:10,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/status HTTP/1.1" 200 None
2024-12-03 00:46:10,960 [ scc.repo] DEBUG - PR 29 jburel 'Build'
2024-12-03 00:46:11,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None
2024-12-03 00:46:11,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None
2024-12-03 00:46:12,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None
2024-12-03 00:46:12,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-12-03 00:46:13,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:46:13,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-12-03 00:46:14,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:46:14,244 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-12-03 00:46:14,245 [ scc.repo] DEBUG ## Branches found:
2024-12-03 00:46:14,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-12-03 00:46:14,245 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:14,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:14,254 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 00:46:14,260 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 00:46:14,261 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 00:46:14,269 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 00:46:14,280 [ scc.git] DEBUG Already up to date.
2024-12-03 00:46:14,280 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head'
2024-12-03 00:46:14,767 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-12-03 00:46:14,768 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD
2024-12-03 00:46:14,773 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head'
2024-12-03 00:46:15,528 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-12-03 00:46:15,529 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD
2024-12-03 00:46:15,535 [ scc.git] DEBUG ## Unique users: []
2024-12-03 00:46:15,536 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:15,536 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:15,542 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61'
2024-12-03 00:46:15,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:15,577 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61'
2024-12-03 00:46:15,600 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py
2024-12-03 00:46:15,666 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 00:46:15,670 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++
2024-12-03 00:46:15,670 [ scc.git] DEBUG 1 file changed, 33 insertions(+)
2024-12-03 00:46:15,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:46:15,815 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24'
2024-12-03 00:46:15,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:15,830 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Build) 92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24'
2024-12-03 00:46:15,858 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 00:46:15,861 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-12-03 00:46:15,862 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-12-03 00:46:15,862 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 6 deletions(-)
2024-12-03 00:46:16,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:46:16,209 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-03 00:46:16,261 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:16,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:16,271 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 00:46:16,321 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 00:46:16,329 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f84f01fb730> has no local changes
2024-12-03 00:46:16,330 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
- PR 29 jburel 'Build'
Generated by OMERO-plugins-push#266 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/)'
2024-12-03 00:46:16,343 [ scc.git] DEBUG [detached HEAD 146189c] merge master -Dorg -Ssuccess-only
2024-12-03 00:46:16,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:46:16,344 [ scc.repo] DEBUG ## PRs found:
2024-12-03 00:46:16,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2024-12-03 00:46:17,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/21 HTTP/1.1" 200 None
2024-12-03 00:46:17,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None
2024-12-03 00:46:18,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:46:18,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 00:46:19,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None
2024-12-03 00:46:19,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:46:19,685 [ scc.repo] DEBUG - PR 21 jburel 'Build'
2024-12-03 00:46:20,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2024-12-03 00:46:20,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2024-12-03 00:46:21,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-12-03 00:46:21,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:46:22,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-12-03 00:46:22,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:46:22,467 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2024-12-03 00:46:22,467 [ scc.repo] DEBUG ## Branches found:
2024-12-03 00:46:22,467 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-12-03 00:46:22,467 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:22,467 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:22,474 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 00:46:22,480 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 00:46:22,480 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 00:46:22,486 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 00:46:22,493 [ scc.git] DEBUG Already up to date.
2024-12-03 00:46:22,493 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-12-03 00:46:22,888 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-12-03 00:46:22,888 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-12-03 00:46:22,896 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head'
2024-12-03 00:46:23,715 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-12-03 00:46:23,716 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD
2024-12-03 00:46:23,721 [ scc.git] DEBUG ## Unique users: []
2024-12-03 00:46:23,721 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:23,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:23,728 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-12-03 00:46:23,735 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:23,741 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-12-03 00:46:23,880 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2024-12-03 00:46:23,880 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2024-12-03 00:46:23,880 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2024-12-03 00:46:23,880 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2024-12-03 00:46:23,880 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2024-12-03 00:46:23,880 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2024-12-03 00:46:23,880 [ scc.git] DEBUG Auto-merging setup.py
2024-12-03 00:46:23,880 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2024-12-03 00:46:23,880 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-03 00:46:23,881 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-03 00:46:23,891 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319'
2024-12-03 00:46:23,900 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0
2024-12-03 00:46:24,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:46:24,035 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-12-03 00:46:24,043 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319'
2024-12-03 00:46:24,051 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#266](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/urls.py
- setup.py
- omero_signup/signup_settings.py
- omero_signup/views.py
--conflicts
2024-12-03 00:46:24,057 [ scc.config] DEBUG Found github.token
2024-12-03 00:46:24,057 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2024-12-03 00:46:24,058 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8cd79097b8e36aef506d1589aa1bc281a0fc1b1'
2024-12-03 00:46:24,066 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:24,077 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Build) d8cd79097b8e36aef506d1589aa1bc281a0fc1b1'
2024-12-03 00:46:24,090 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 00:46:24,094 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-12-03 00:46:24,095 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-12-03 00:46:24,095 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++
2024-12-03 00:46:24,095 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-)
2024-12-03 00:46:24,095 [ scc.git] DEBUG create mode 100755 .omeroci/app-build
2024-12-03 00:46:24,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:46:24,422 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-03 00:46:24,491 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:24,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:24,502 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 00:46:24,551 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 00:46:24,560 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f84f01fb610> has no local changes
2024-12-03 00:46:24,561 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 21 jburel 'Build'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#266 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/)'
2024-12-03 00:46:24,573 [ scc.git] DEBUG [detached HEAD 86f78a7] merge master -Dorg -Ssuccess-only
2024-12-03 00:46:24,574 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:46:24,574 [ scc.repo] DEBUG ## PRs found:
2024-12-03 00:46:24,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2024-12-03 00:46:25,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2024-12-03 00:46:25,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2024-12-03 00:46:26,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-12-03 00:46:26,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:46:27,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-12-03 00:46:27,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:46:27,722 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-12-03 00:46:27,722 [ scc.repo] DEBUG ## Branches found:
2024-12-03 00:46:27,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-12-03 00:46:27,722 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:27,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:27,730 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 00:46:27,783 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 00:46:27,783 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 00:46:27,807 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 00:46:27,815 [ scc.git] DEBUG Already up to date.
2024-12-03 00:46:27,815 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2024-12-03 00:46:28,196 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2024-12-03 00:46:28,196 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2024-12-03 00:46:28,202 [ scc.git] DEBUG ## Unique users: []
2024-12-03 00:46:28,202 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:28,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:28,209 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2024-12-03 00:46:28,223 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:28,233 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2024-12-03 00:46:28,316 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 00:46:28,320 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2024-12-03 00:46:28,320 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2024-12-03 00:46:28,321 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2024-12-03 00:46:28,321 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2024-12-03 00:46:28,321 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2024-12-03 00:46:28,321 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2024-12-03 00:46:28,321 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2024-12-03 00:46:28,324 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2024-12-03 00:46:28,324 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2024-12-03 00:46:28,324 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2024-12-03 00:46:28,324 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2024-12-03 00:46:28,324 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2024-12-03 00:46:28,324 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2024-12-03 00:46:28,324 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2024-12-03 00:46:28,324 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2024-12-03 00:46:28,325 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2024-12-03 00:46:28,325 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2024-12-03 00:46:28,325 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2024-12-03 00:46:28,325 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2024-12-03 00:46:28,325 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2024-12-03 00:46:28,325 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2024-12-03 00:46:28,325 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2024-12-03 00:46:28,325 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2024-12-03 00:46:28,325 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2024-12-03 00:46:28,325 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2024-12-03 00:46:28,325 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2024-12-03 00:46:28,325 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2024-12-03 00:46:28,325 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2024-12-03 00:46:28,325 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2024-12-03 00:46:28,325 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2024-12-03 00:46:28,326 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2024-12-03 00:46:28,326 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2024-12-03 00:46:28,326 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2024-12-03 00:46:28,326 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2024-12-03 00:46:28,326 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2024-12-03 00:46:28,326 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2024-12-03 00:46:28,326 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2024-12-03 00:46:28,326 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2024-12-03 00:46:28,326 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2024-12-03 00:46:28,326 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2024-12-03 00:46:28,326 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2024-12-03 00:46:28,326 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2024-12-03 00:46:28,326 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2024-12-03 00:46:28,326 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2024-12-03 00:46:28,326 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2024-12-03 00:46:28,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:46:28,463 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-03 00:46:28,514 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:28,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:28,521 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 00:46:28,575 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 00:46:28,588 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f84f01fcca0> has no local changes
2024-12-03 00:46:28,588 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Generated by OMERO-plugins-push#266 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/)'
2024-12-03 00:46:28,601 [ scc.git] DEBUG [detached HEAD 21fe2e0] merge master -Dorg -Ssuccess-only
2024-12-03 00:46:28,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:46:28,602 [ scc.repo] DEBUG ## PRs found:
2024-12-03 00:46:28,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2024-12-03 00:46:28,912 [ scc.repo] DEBUG ## Branches found:
2024-12-03 00:46:28,912 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-12-03 00:46:28,912 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:28,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:28,923 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 00:46:28,932 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 00:46:28,933 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 00:46:28,946 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 00:46:28,966 [ scc.git] DEBUG Updating aca9e9c..100f6ae
2024-12-03 00:46:29,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls/13 HTTP/1.1" 200 None
2024-12-03 00:46:29,557 [ scc.git] DEBUG ## Unique users: []
2024-12-03 00:46:29,557 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:29,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:29,569 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-03 00:46:29,620 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:29,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:29,627 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 00:46:29,674 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 00:46:29,682 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f84f015c430> has no local changes
2024-12-03 00:46:29,682 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Updating aca9e9c..100f6ae
Previously merged:
- PR 13 jburel 'Build'
Generated by OMERO-plugins-push#266 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/)'
2024-12-03 00:46:29,694 [ scc.git] DEBUG [detached HEAD f6d31e9] merge master -Dorg -Ssuccess-only
2024-12-03 00:46:29,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:46:29,694 [ scc.repo] DEBUG ## PRs found:
2024-12-03 00:46:30,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None
2024-12-03 00:46:30,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None
2024-12-03 00:46:31,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None
2024-12-03 00:46:31,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:46:32,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 00:46:32,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None
2024-12-03 00:46:32,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:46:32,952 [ scc.repo] DEBUG - PR 20 jburel 'Build'
2024-12-03 00:46:32,952 [ scc.repo] DEBUG ## Branches found:
2024-12-03 00:46:32,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-12-03 00:46:32,953 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:32,953 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:32,963 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 00:46:32,969 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 00:46:32,969 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 00:46:32,975 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 00:46:32,980 [ scc.git] DEBUG Already up to date.
2024-12-03 00:46:32,981 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head'
2024-12-03 00:46:33,589 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope
2024-12-03 00:46:33,589 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD
2024-12-03 00:46:33,595 [ scc.git] DEBUG ## Unique users: []
2024-12-03 00:46:33,595 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:33,595 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:33,604 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea'
2024-12-03 00:46:33,612 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:33,620 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea'
2024-12-03 00:46:33,701 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 00:46:33,705 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-12-03 00:46:33,705 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-12-03 00:46:33,705 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++
2024-12-03 00:46:33,705 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-)
2024-12-03 00:46:33,705 [ scc.git] DEBUG create mode 100755 .omeroci/app-build
2024-12-03 00:46:33,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:46:33,855 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-03 00:46:33,906 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:33,907 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:33,916 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 00:46:33,964 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 00:46:33,972 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f84f015cf70> has no local changes
2024-12-03 00:46:33,972 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Already up to date.
Merged PRs:
- PR 20 jburel 'Build'
Generated by OMERO-plugins-push#266 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/)'
2024-12-03 00:46:33,982 [ scc.git] DEBUG [detached HEAD ac7a376] merge master -Dorg -Ssuccess-only
2024-12-03 00:46:33,982 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:46:33,982 [ scc.git] INFO Overriding base-branch from master to main
2024-12-03 00:46:33,983 [ scc.repo] DEBUG ## PRs found:
2024-12-03 00:46:34,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2024-12-03 00:46:34,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None
2024-12-03 00:46:35,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None
2024-12-03 00:46:35,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None
2024-12-03 00:46:36,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:46:36,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 00:46:37,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17 HTTP/1.1" 200 None
2024-12-03 00:46:37,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17/comments HTTP/1.1" 200 None
2024-12-03 00:46:38,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95 HTTP/1.1" 200 None
2024-12-03 00:46:38,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:46:39,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 00:46:39,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2024-12-03 00:46:40,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2024-12-03 00:46:40,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2024-12-03 00:46:41,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-12-03 00:46:41,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:46:42,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-12-03 00:46:42,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:46:42,477 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-12-03 00:46:42,478 [ scc.repo] DEBUG ## Branches found:
2024-12-03 00:46:42,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-12-03 00:46:42,478 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:42,478 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:42,485 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2024-12-03 00:46:42,491 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 00:46:42,491 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2024-12-03 00:46:42,496 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2024-12-03 00:46:42,501 [ scc.git] DEBUG Already up to date.
2024-12-03 00:46:42,501 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2024-12-03 00:46:42,840 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2024-12-03 00:46:42,840 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2024-12-03 00:46:42,846 [ scc.git] DEBUG ## Unique users: []
2024-12-03 00:46:42,846 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:42,846 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:42,854 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-12-03 00:46:42,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:42,865 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-12-03 00:46:43,005 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2024-12-03 00:46:43,005 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2024-12-03 00:46:43,005 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-03 00:46:43,005 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-03 00:46:43,012 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-12-03 00:46:43,018 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0
2024-12-03 00:46:43,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:46:43,152 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-12-03 00:46:43,160 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-12-03 00:46:43,166 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#266](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2024-12-03 00:46:43,173 [ scc.config] DEBUG Found github.token
2024-12-03 00:46:43,173 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2024-12-03 00:46:43,173 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-03 00:46:43,216 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:43,217 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:43,223 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 00:46:43,267 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 00:46:43,274 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f84f015c490> has no local changes
2024-12-03 00:46:43,274 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 17 jburel 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#266 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/)'
2024-12-03 00:46:43,283 [ scc.git] DEBUG [detached HEAD 1a96961] merge master -Dorg -Ssuccess-only
2024-12-03 00:46:43,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:46:43,284 [ scc.repo] DEBUG ## PRs found:
2024-12-03 00:46:43,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2024-12-03 00:46:43,580 [ scc.repo] DEBUG ## Branches found:
2024-12-03 00:46:43,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-12-03 00:46:43,580 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:43,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:43,587 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 00:46:43,592 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 00:46:43,593 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 00:46:43,600 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 00:46:43,611 [ scc.git] DEBUG Updating adfa132..70b01ed
2024-12-03 00:46:44,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls/24 HTTP/1.1" 200 None
2024-12-03 00:46:44,259 [ scc.git] DEBUG ## Unique users: []
2024-12-03 00:46:44,259 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:44,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:44,264 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-03 00:46:44,315 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:44,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:44,322 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 00:46:44,367 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 00:46:44,374 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f84f016ec10> has no local changes
2024-12-03 00:46:44,374 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Updating adfa132..70b01ed
Previously merged:
- PR 24 jburel 'Build'
Generated by OMERO-plugins-push#266 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/)'
2024-12-03 00:46:44,384 [ scc.git] DEBUG [detached HEAD ca4956d] merge master -Dorg -Ssuccess-only
2024-12-03 00:46:44,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:46:44,384 [ scc.repo] DEBUG ## PRs found:
2024-12-03 00:46:44,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2024-12-03 00:46:44,688 [ scc.repo] DEBUG ## Branches found:
2024-12-03 00:46:44,688 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-12-03 00:46:44,688 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:44,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:44,695 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 00:46:44,700 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 00:46:44,700 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 00:46:44,707 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 00:46:44,720 [ scc.git] DEBUG Updating 8da48e1..5bfef29
2024-12-03 00:46:45,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls/36 HTTP/1.1" 200 None
2024-12-03 00:46:45,387 [ scc.git] DEBUG ## Unique users: []
2024-12-03 00:46:45,387 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:45,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:45,393 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-03 00:46:45,436 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:45,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:45,442 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 00:46:45,487 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 00:46:45,494 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f84f0113970> has no local changes
2024-12-03 00:46:45,494 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Updating 8da48e1..5bfef29
Previously merged:
- PR 36 jburel 'Build'
Generated by OMERO-plugins-push#266 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/)'
2024-12-03 00:46:45,506 [ scc.git] DEBUG [detached HEAD 80b1dd8] merge master -Dorg -Ssuccess-only
2024-12-03 00:46:45,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:46:45,507 [ scc.repo] DEBUG ## PRs found:
2024-12-03 00:46:45,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2024-12-03 00:46:46,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2024-12-03 00:46:46,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2024-12-03 00:46:47,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-12-03 00:46:47,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:46:48,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-12-03 00:46:48,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:46:48,675 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2024-12-03 00:46:48,675 [ scc.repo] DEBUG ## Branches found:
2024-12-03 00:46:48,675 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-12-03 00:46:48,675 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:48,676 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:48,681 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 00:46:48,686 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 00:46:48,686 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 00:46:48,692 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 00:46:48,698 [ scc.git] DEBUG Already up to date.
2024-12-03 00:46:48,698 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2024-12-03 00:46:49,128 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2024-12-03 00:46:49,128 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2024-12-03 00:46:49,133 [ scc.git] DEBUG ## Unique users: []
2024-12-03 00:46:49,133 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:49,133 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:49,139 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-12-03 00:46:49,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:49,149 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-12-03 00:46:49,203 [ scc.git] DEBUG Auto-merging Dockerfile
2024-12-03 00:46:49,203 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2024-12-03 00:46:49,203 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-03 00:46:49,204 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-03 00:46:49,210 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-12-03 00:46:49,217 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2024-12-03 00:46:49,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:46:49,351 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-12-03 00:46:49,357 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-12-03 00:46:49,363 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#266](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2024-12-03 00:46:49,368 [ scc.config] DEBUG Found github.token
2024-12-03 00:46:49,369 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2024-12-03 00:46:49,369 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-03 00:46:49,409 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:46:49,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:46:49,415 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 00:46:49,458 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 00:46:49,465 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f84f01135e0> has no local changes
2024-12-03 00:46:49,466 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#266 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/)'
2024-12-03 00:46:49,476 [ scc.git] DEBUG [detached HEAD 902feed] merge master -Dorg -Ssuccess-only
2024-12-03 00:46:49,477 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:46:49,477 [ scc.git] INFO Overriding base-branch from master to develop
2024-12-03 00:46:49,477 [ scc.repo] DEBUG ## PRs found:
2024-12-03 00:46:49,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-12-03 00:46:50,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-12-03 00:46:50,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-12-03 00:46:51,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-12-03 00:46:51,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:46:52,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 00:46:52,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-12-03 00:46:53,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:46:53,109 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-12-03 00:46:53,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-12-03 00:46:54,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-12-03 00:46:54,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None
2024-12-03 00:46:55,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-12-03 00:46:55,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-12-03 00:46:56,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-12-03 00:46:56,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-12-03 00:46:56,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-12-03 00:46:57,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 00:46:57,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-12-03 00:46:58,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-12-03 00:46:58,223 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-12-03 00:46:58,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-12-03 00:46:59,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-12-03 00:46:59,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-12-03 00:47:00,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-12-03 00:47:00,183 [ scc.repo] DEBUG ## Branches found:
2024-12-03 00:47:00,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-12-03 00:47:00,183 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:47:00,183 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:47:00,193 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-12-03 00:47:00,203 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 00:47:00,204 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-12-03 00:47:00,214 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-12-03 00:47:00,224 [ scc.git] DEBUG Already up to date.
2024-12-03 00:47:00,225 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-12-03 00:47:00,629 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-12-03 00:47:00,629 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-12-03 00:47:00,636 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-12-03 00:47:00,999 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-12-03 00:47:00,999 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-12-03 00:47:01,005 [ scc.git] DEBUG ## Unique users: []
2024-12-03 00:47:01,005 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:47:01,005 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:47:01,014 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-12-03 00:47:01,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:47:01,031 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-12-03 00:47:01,065 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-12-03 00:47:01,065 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-12-03 00:47:01,065 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-03 00:47:01,066 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-03 00:47:01,074 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-12-03 00:47:01,084 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-12-03 00:47:01,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:01,239 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-12-03 00:47:01,247 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-12-03 00:47:01,254 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#266](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-12-03 00:47:01,260 [ scc.config] DEBUG Found github.token
2024-12-03 00:47:01,260 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-12-03 00:47:01,260 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-12-03 00:47:01,266 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:47:01,273 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-12-03 00:47:01,284 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 00:47:01,287 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-12-03 00:47:01,287 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-12-03 00:47:01,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:01,668 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-03 00:47:01,725 [ scc.git] DEBUG Get sha1 of %s
2024-12-03 00:47:01,726 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 00:47:01,733 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 00:47:01,781 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 00:47:01,792 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f84f018cf40> has no local changes
2024-12-03 00:47:01,793 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#266 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/)'
2024-12-03 00:47:01,807 [ scc.git] DEBUG [detached HEAD 4c51cf1] merge master -Dorg -Ssuccess-only
2024-12-03 00:47:01,808 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:01,808 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 00:47:01,906 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2024-12-03 00:47:02,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:02,075 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2024-12-03 00:47:02,085 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2024-12-03 00:47:02,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:02,457 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2024-12-03 00:47:02,465 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2024-12-03 00:47:02,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:02,855 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2024-12-03 00:47:02,864 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2024-12-03 00:47:03,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:03,262 [ scc.config] DEBUG Found submodule.omero-figure.url
2024-12-03 00:47:03,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:03,660 [ scc.config] DEBUG Found submodule.omero-figure.branch
2024-12-03 00:47:03,667 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2024-12-03 00:47:04,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:04,058 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2024-12-03 00:47:04,074 [ scc.config] DEBUG Found submodule.omero-gallery.url
2024-12-03 00:47:04,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:04,467 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2024-12-03 00:47:04,479 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2024-12-03 00:47:04,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:04,869 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2024-12-03 00:47:04,880 [ scc.config] DEBUG Found submodule.omero-mapr.url
2024-12-03 00:47:05,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:05,253 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2024-12-03 00:47:05,272 [ scc.config] DEBUG Found submodule.omero-metadata.url
2024-12-03 00:47:05,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:05,644 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2024-12-03 00:47:05,652 [ scc.config] DEBUG Found submodule.omero-parade.url
2024-12-03 00:47:06,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:06,034 [ scc.config] DEBUG Found submodule.omero-parade.branch
2024-12-03 00:47:06,043 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2024-12-03 00:47:06,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:06,416 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2024-12-03 00:47:06,424 [ scc.config] DEBUG Found submodule.omero-rois.url
2024-12-03 00:47:06,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:06,810 [ scc.config] DEBUG Found submodule.omero-signup.url
2024-12-03 00:47:07,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:07,207 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2024-12-03 00:47:07,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:07,584 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2024-12-03 00:47:07,594 [ scc.config] DEBUG Found submodule.omero-upload.url
2024-12-03 00:47:07,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:07,992 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2024-12-03 00:47:08,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:08,389 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2024-12-03 00:47:08,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:08,773 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2024-12-03 00:47:08,782 [ scc.config] DEBUG Found submodule.omero-weberror.url
2024-12-03 00:47:09,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:09,157 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2024-12-03 00:47:09,165 [ scc.config] DEBUG Found submodule.omero-webtest.url
2024-12-03 00:47:09,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:09,562 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2024-12-03 00:47:09,568 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2024-12-03 00:47:09,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:09,947 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2024-12-03 00:47:09,953 [ scc.config] DEBUG Found submodule.scripts.url
2024-12-03 00:47:10,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 00:47:10,334 [ scc.config] DEBUG Found submodule.scripts.branch
2024-12-03 00:47:10,334 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 00:47:10,411 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f84f66e9ee0> has local changes
2024-12-03 00:47:10,412 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 406 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `b4102d4`'
- PR 407 dependabot[bot] 'Bump omero-gallery from `56f4435` to `2a621da`'
- PR 408 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `c0517ed`'
- PR 409 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `0a557da`'
- PR 411 dependabot[bot] 'Bump omero-figure from `24444fe` to `1dfb138`'
Repository: ome/minimal-omero-client
Updating 4628e82..ca8c2ea
Previously merged:
- PR 67 jburel 'Gateway 5.10.0'
- PR 68 jburel 'Bump action '
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Updating 027b3e6..4777ef8
Previously merged:
- PR 27 jburel 'Build'
- PR 25 jburel 'review message'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
- PR 59 will-moore 'Apply settings to Plate' (status: failure)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Updating 9b73dd9..11d3587
Previously merged:
- PR 165 jburel 'Build'
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 102 will-moore 'Zarr export tests'
- PR 123 will-moore 'Support export of Fileset:ID'
Repository: ome/omero-figure
Excluded PRs:
- PR 600 Rdornier 'Label on rois' (user: Rdornier)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Already up to date.
Merged PRs:
- PR 592 will-moore 'Filter owners and groups dropdown lists'
- PR 602 will-moore 'Changelog 7.2.0'
- PR 603 will-moore 'Inset bugfixes'
Repository: ome/omero-fpbioimage
Updating e5b3ca3..3b6c05a
Previously merged:
- PR 30 jburel 'Build'
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Repository: ome/omero-metadata
Already up to date.
Merged PRs:
- PR 89 jburel 'Build'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Updating 5d441c2..fb5ae86
Previously merged:
- PR 133 jburel 'Build'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
Repository: ome/omero-prometheus-tools
Excluded PRs:
- PR 15 jburel 'Build' (status: failure)
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
- PR 29 jburel 'Build'
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 21 jburel 'Build'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Repository: ome/omero-upload
Updating aca9e9c..100f6ae
Previously merged:
- PR 13 jburel 'Build'
Repository: ome/omero-virtual-microscope
Already up to date.
Merged PRs:
- PR 20 jburel 'Build'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 17 jburel 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Updating adfa132..70b01ed
Previously merged:
- PR 24 jburel 'Build'
Repository: openmicroscopy/omero-webtest
Updating 8da48e1..5bfef29
Previously merged:
- PR 36 jburel 'Build'
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#266 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/266/)'
2024-12-03 00:47:10,426 [ scc.git] DEBUG [detached HEAD 7dcd573] merge master -Dorg -Ssuccess-only
2024-12-03 00:47:10,427 [ scc.merge] INFO Repository: ome/omero-plugins
2024-12-03 00:47:10,427 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2024-12-03 00:47:10,427 [ scc.merge] INFO Already up to date.
2024-12-03 00:47:10,427 [ scc.merge] INFO
2024-12-03 00:47:10,427 [ scc.merge] INFO Merged PRs:
2024-12-03 00:47:10,427 [ scc.merge] INFO - PR 406 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `b4102d4`'
2024-12-03 00:47:10,427 [ scc.merge] INFO - PR 407 dependabot[bot] 'Bump omero-gallery from `56f4435` to `2a621da`'
2024-12-03 00:47:10,427 [ scc.merge] INFO - PR 408 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `c0517ed`'
2024-12-03 00:47:10,427 [ scc.merge] INFO - PR 409 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `0a557da`'
2024-12-03 00:47:10,427 [ scc.merge] INFO - PR 411 dependabot[bot] 'Bump omero-figure from `24444fe` to `1dfb138`'
2024-12-03 00:47:10,427 [ scc.merge] INFO
2024-12-03 00:47:10,427 [ scc.merge] INFO Repository: ome/minimal-omero-client
2024-12-03 00:47:10,427 [ scc.merge] INFO Updating 4628e82..ca8c2ea
2024-12-03 00:47:10,427 [ scc.merge] INFO Previously merged:
2024-12-03 00:47:10,427 [ scc.merge] INFO - PR 67 jburel 'Gateway 5.10.0'
2024-12-03 00:47:10,427 [ scc.merge] INFO - PR 68 jburel 'Bump action '
2024-12-03 00:47:10,427 [ scc.merge] INFO
2024-12-03 00:47:10,427 [ scc.merge] INFO
2024-12-03 00:47:10,427 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2024-12-03 00:47:10,427 [ scc.merge] INFO Excluded PRs:
2024-12-03 00:47:10,428 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2024-12-03 00:47:10,428 [ scc.merge] INFO Updating 027b3e6..4777ef8
2024-12-03 00:47:10,428 [ scc.merge] INFO Previously merged:
2024-12-03 00:47:10,428 [ scc.merge] INFO - PR 27 jburel 'Build'
2024-12-03 00:47:10,428 [ scc.merge] INFO - PR 25 jburel 'review message'
2024-12-03 00:47:10,428 [ scc.merge] INFO
2024-12-03 00:47:10,428 [ scc.merge] INFO
2024-12-03 00:47:10,428 [ scc.merge] INFO Repository: ome/omero-cli-render
2024-12-03 00:47:10,428 [ scc.merge] INFO Excluded PRs:
2024-12-03 00:47:10,428 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
2024-12-03 00:47:10,428 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' (status: failure)
2024-12-03 00:47:10,428 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2024-12-03 00:47:10,428 [ scc.merge] INFO Already up to date.
2024-12-03 00:47:10,428 [ scc.merge] INFO
2024-12-03 00:47:10,428 [ scc.merge] INFO
2024-12-03 00:47:10,428 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2024-12-03 00:47:10,428 [ scc.merge] INFO Excluded PRs:
2024-12-03 00:47:10,428 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-12-03 00:47:10,428 [ scc.merge] INFO Updating 9b73dd9..11d3587
2024-12-03 00:47:10,428 [ scc.merge] INFO Previously merged:
2024-12-03 00:47:10,428 [ scc.merge] INFO - PR 165 jburel 'Build'
2024-12-03 00:47:10,428 [ scc.merge] INFO
2024-12-03 00:47:10,428 [ scc.merge] INFO Merged PRs:
2024-12-03 00:47:10,428 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2024-12-03 00:47:10,428 [ scc.merge] INFO
2024-12-03 00:47:10,428 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-03 00:47:10,428 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests'
2024-12-03 00:47:10,428 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID'
2024-12-03 00:47:10,428 [ scc.merge] INFO
2024-12-03 00:47:10,428 [ scc.merge] INFO Repository: ome/omero-figure
2024-12-03 00:47:10,428 [ scc.merge] INFO Excluded PRs:
2024-12-03 00:47:10,428 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier)
2024-12-03 00:47:10,428 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2024-12-03 00:47:10,428 [ scc.merge] INFO Already up to date.
2024-12-03 00:47:10,428 [ scc.merge] INFO
2024-12-03 00:47:10,429 [ scc.merge] INFO Merged PRs:
2024-12-03 00:47:10,429 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists'
2024-12-03 00:47:10,429 [ scc.merge] INFO - PR 602 will-moore 'Changelog 7.2.0'
2024-12-03 00:47:10,429 [ scc.merge] INFO - PR 603 will-moore 'Inset bugfixes'
2024-12-03 00:47:10,429 [ scc.merge] INFO
2024-12-03 00:47:10,429 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2024-12-03 00:47:10,429 [ scc.merge] INFO Updating e5b3ca3..3b6c05a
2024-12-03 00:47:10,429 [ scc.merge] INFO Previously merged:
2024-12-03 00:47:10,429 [ scc.merge] INFO - PR 30 jburel 'Build'
2024-12-03 00:47:10,429 [ scc.merge] INFO
2024-12-03 00:47:10,429 [ scc.merge] INFO Merged PRs:
2024-12-03 00:47:10,429 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2024-12-03 00:47:10,429 [ scc.merge] INFO
2024-12-03 00:47:10,429 [ scc.merge] INFO Repository: ome/omero-gallery
2024-12-03 00:47:10,429 [ scc.merge] INFO Already up to date.
2024-12-03 00:47:10,429 [ scc.merge] INFO
2024-12-03 00:47:10,429 [ scc.merge] INFO Merged PRs:
2024-12-03 00:47:10,429 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2024-12-03 00:47:10,429 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2024-12-03 00:47:10,429 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2024-12-03 00:47:10,429 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2024-12-03 00:47:10,429 [ scc.merge] INFO
2024-12-03 00:47:10,429 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-03 00:47:10,429 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2024-12-03 00:47:10,429 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2024-12-03 00:47:10,429 [ scc.merge] INFO
2024-12-03 00:47:10,429 [ scc.merge] INFO Repository: ome/omero-iviewer
2024-12-03 00:47:10,429 [ scc.merge] INFO Excluded PRs:
2024-12-03 00:47:10,429 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2024-12-03 00:47:10,429 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2024-12-03 00:47:10,429 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2024-12-03 00:47:10,429 [ scc.merge] INFO Already up to date.
2024-12-03 00:47:10,429 [ scc.merge] INFO
2024-12-03 00:47:10,429 [ scc.merge] INFO Merged PRs:
2024-12-03 00:47:10,429 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2024-12-03 00:47:10,429 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2024-12-03 00:47:10,429 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2024-12-03 00:47:10,429 [ scc.merge] INFO
2024-12-03 00:47:10,429 [ scc.merge] INFO Repository: ome/omero-mapr
2024-12-03 00:47:10,430 [ scc.merge] INFO Excluded PRs:
2024-12-03 00:47:10,430 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2024-12-03 00:47:10,430 [ scc.merge] INFO Already up to date.
2024-12-03 00:47:10,430 [ scc.merge] INFO
2024-12-03 00:47:10,430 [ scc.merge] INFO Merged PRs:
2024-12-03 00:47:10,430 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2024-12-03 00:47:10,430 [ scc.merge] INFO
2024-12-03 00:47:10,430 [ scc.merge] INFO Repository: ome/omero-metadata
2024-12-03 00:47:10,430 [ scc.merge] INFO Already up to date.
2024-12-03 00:47:10,430 [ scc.merge] INFO
2024-12-03 00:47:10,430 [ scc.merge] INFO Merged PRs:
2024-12-03 00:47:10,430 [ scc.merge] INFO - PR 89 jburel 'Build'
2024-12-03 00:47:10,430 [ scc.merge] INFO
2024-12-03 00:47:10,430 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-03 00:47:10,430 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-12-03 00:47:10,430 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-12-03 00:47:10,430 [ scc.merge] INFO
2024-12-03 00:47:10,430 [ scc.merge] INFO Repository: ome/omero-parade
2024-12-03 00:47:10,430 [ scc.merge] INFO Excluded PRs:
2024-12-03 00:47:10,430 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2024-12-03 00:47:10,430 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2024-12-03 00:47:10,430 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2024-12-03 00:47:10,430 [ scc.merge] INFO Updating 5d441c2..fb5ae86
2024-12-03 00:47:10,430 [ scc.merge] INFO Previously merged:
2024-12-03 00:47:10,430 [ scc.merge] INFO - PR 133 jburel 'Build'
2024-12-03 00:47:10,430 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-12-03 00:47:10,430 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-12-03 00:47:10,430 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-12-03 00:47:10,430 [ scc.merge] INFO
2024-12-03 00:47:10,430 [ scc.merge] INFO
2024-12-03 00:47:10,430 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2024-12-03 00:47:10,430 [ scc.merge] INFO Excluded PRs:
2024-12-03 00:47:10,430 [ scc.merge] INFO - PR 15 jburel 'Build' (status: failure)
2024-12-03 00:47:10,430 [ scc.merge] INFO Already up to date.
2024-12-03 00:47:10,430 [ scc.merge] INFO
2024-12-03 00:47:10,430 [ scc.merge] INFO Merged PRs:
2024-12-03 00:47:10,430 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel'
2024-12-03 00:47:10,430 [ scc.merge] INFO
2024-12-03 00:47:10,430 [ scc.merge] INFO Repository: ome/omero-rois
2024-12-03 00:47:10,431 [ scc.merge] INFO Excluded PRs:
2024-12-03 00:47:10,431 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-12-03 00:47:10,431 [ scc.merge] INFO Already up to date.
2024-12-03 00:47:10,431 [ scc.merge] INFO
2024-12-03 00:47:10,431 [ scc.merge] INFO Merged PRs:
2024-12-03 00:47:10,431 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-12-03 00:47:10,431 [ scc.merge] INFO - PR 29 jburel 'Build'
2024-12-03 00:47:10,431 [ scc.merge] INFO
2024-12-03 00:47:10,431 [ scc.merge] INFO Repository: ome/omero-signup
2024-12-03 00:47:10,431 [ scc.merge] INFO Already up to date.
2024-12-03 00:47:10,431 [ scc.merge] INFO
2024-12-03 00:47:10,431 [ scc.merge] INFO Merged PRs:
2024-12-03 00:47:10,431 [ scc.merge] INFO - PR 21 jburel 'Build'
2024-12-03 00:47:10,431 [ scc.merge] INFO
2024-12-03 00:47:10,431 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-03 00:47:10,431 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2024-12-03 00:47:10,431 [ scc.merge] INFO
2024-12-03 00:47:10,431 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2024-12-03 00:47:10,431 [ scc.merge] INFO Already up to date.
2024-12-03 00:47:10,431 [ scc.merge] INFO
2024-12-03 00:47:10,431 [ scc.merge] INFO Merged PRs:
2024-12-03 00:47:10,431 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-12-03 00:47:10,431 [ scc.merge] INFO
2024-12-03 00:47:10,431 [ scc.merge] INFO Repository: ome/omero-upload
2024-12-03 00:47:10,431 [ scc.merge] INFO Updating aca9e9c..100f6ae
2024-12-03 00:47:10,431 [ scc.merge] INFO Previously merged:
2024-12-03 00:47:10,431 [ scc.merge] INFO - PR 13 jburel 'Build'
2024-12-03 00:47:10,431 [ scc.merge] INFO
2024-12-03 00:47:10,431 [ scc.merge] INFO
2024-12-03 00:47:10,431 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2024-12-03 00:47:10,431 [ scc.merge] INFO Already up to date.
2024-12-03 00:47:10,431 [ scc.merge] INFO
2024-12-03 00:47:10,431 [ scc.merge] INFO Merged PRs:
2024-12-03 00:47:10,431 [ scc.merge] INFO - PR 20 jburel 'Build'
2024-12-03 00:47:10,431 [ scc.merge] INFO
2024-12-03 00:47:10,431 [ scc.merge] INFO Repository: ome/omero-web-zarr
2024-12-03 00:47:10,431 [ scc.merge] INFO Excluded PRs:
2024-12-03 00:47:10,431 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure)
2024-12-03 00:47:10,432 [ scc.merge] INFO - PR 17 jburel 'Build' (status: failure)
2024-12-03 00:47:10,432 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2024-12-03 00:47:10,432 [ scc.merge] INFO Already up to date.
2024-12-03 00:47:10,432 [ scc.merge] INFO
2024-12-03 00:47:10,432 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-03 00:47:10,432 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-12-03 00:47:10,432 [ scc.merge] INFO
2024-12-03 00:47:10,432 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2024-12-03 00:47:10,432 [ scc.merge] INFO Updating adfa132..70b01ed
2024-12-03 00:47:10,432 [ scc.merge] INFO Previously merged:
2024-12-03 00:47:10,432 [ scc.merge] INFO - PR 24 jburel 'Build'
2024-12-03 00:47:10,432 [ scc.merge] INFO
2024-12-03 00:47:10,432 [ scc.merge] INFO
2024-12-03 00:47:10,432 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2024-12-03 00:47:10,432 [ scc.merge] INFO Updating 8da48e1..5bfef29
2024-12-03 00:47:10,432 [ scc.merge] INFO Previously merged:
2024-12-03 00:47:10,432 [ scc.merge] INFO - PR 36 jburel 'Build'
2024-12-03 00:47:10,432 [ scc.merge] INFO
2024-12-03 00:47:10,432 [ scc.merge] INFO
2024-12-03 00:47:10,432 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2024-12-03 00:47:10,432 [ scc.merge] INFO Already up to date.
2024-12-03 00:47:10,432 [ scc.merge] INFO
2024-12-03 00:47:10,432 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-03 00:47:10,432 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2024-12-03 00:47:10,432 [ scc.merge] INFO
2024-12-03 00:47:10,432 [ scc.merge] INFO Repository: ome/scripts
2024-12-03 00:47:10,432 [ scc.merge] INFO Excluded PRs:
2024-12-03 00:47:10,432 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-12-03 00:47:10,432 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-12-03 00:47:10,432 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-12-03 00:47:10,432 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-12-03 00:47:10,432 [ scc.merge] INFO Already up to date.
2024-12-03 00:47:10,432 [ scc.merge] INFO
2024-12-03 00:47:10,432 [ scc.merge] INFO Merged PRs:
2024-12-03 00:47:10,432 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-12-03 00:47:10,432 [ scc.merge] INFO
2024-12-03 00:47:10,432 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-03 00:47:10,432 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-12-03 00:47:10,432 [ scc.merge] INFO
2024-12-03 00:47:10,433 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-12-03 00:47:10,433 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,438 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-12-03 00:47:10,439 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-12-03 00:47:10,444 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-12-03 00:47:10,448 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,453 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,453 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-12-03 00:47:10,453 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,458 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,458 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-12-03 00:47:10,458 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,463 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,463 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-12-03 00:47:10,463 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-12-03 00:47:10,468 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-12-03 00:47:10,473 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-12-03 00:47:10,478 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-12-03 00:47:10,483 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-12-03 00:47:10,488 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-12-03 00:47:10,494 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-12-03 00:47:10,504 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,520 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,520 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-12-03 00:47:10,520 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-12-03 00:47:10,528 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-12-03 00:47:10,534 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-12-03 00:47:10,540 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-12-03 00:47:10,546 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-12-03 00:47:10,552 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,557 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,558 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-12-03 00:47:10,558 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-12-03 00:47:10,566 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 00:47:10,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-12-03 00:47:10,571 [ scc.git] DEBUG Calling 'git remote'
2024-12-03 00:47:10,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.1-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD fbaef94] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 027b3e6
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from c0517ed
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 9b73dd9
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 1dfb1389
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from e5b3ca3
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 2a621da
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from b4102d4
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 0a557da
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from fc20959
nothing to commit, working tree clean
Entering 'omero-parade'
HEAD detached from 5d441c2
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from 18bccb6
nothing to commit, working tree clean
Entering 'omero-rois'
HEAD detached from 5c752d5
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from c8610db
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from cda3ec6
nothing to commit, working tree clean
Entering 'omero-upload'
HEAD detached from aca9e9c
nothing to commit, working tree clean
Entering 'omero-virtual-microscope'
HEAD detached from deab817
nothing to commit, working tree clean
Entering 'omero-web-zarr'
HEAD detached from 67bb245
nothing to commit, working tree clean
Entering 'omero-weberror'
HEAD detached from adfa132
nothing to commit, working tree clean
Entering 'omero-webtest'
HEAD detached from 8da48e1
nothing to commit, working tree clean
Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
nothing to commit, working tree clean
Entering 'scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
[detached HEAD 6cf3770] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-12-03 00:47:58,244 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-12-03 00:48:07,167 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-12-03 00:48:09,495 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-12-03 00:48:14,018 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-12-03 00:48:53,781 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
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