Skipping 108 KB..
Full LogTestTestTestTestTestTestTestTestTestTestTestTestTest
2024-12-15 00:43:45,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:43:46,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-15 00:43:46,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2024-12-15 00:43:46,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:43:46,969 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2024-12-15 00:43:47,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None
2024-12-15 00:43:47,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None
2024-12-15 00:43:47,911 [ scc.repo] DEBUG # ... Include label: dependencies
2024-12-15 00:43:48,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2024-12-15 00:43:48,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:43:49,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-15 00:43:49,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2024-12-15 00:43:50,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:43:50,335 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2024-12-15 00:43:50,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None
2024-12-15 00:43:50,863 [ scc.repo] DEBUG # ... Include label: dependencies
2024-12-15 00:43:51,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2024-12-15 00:43:51,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:43:52,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-15 00:43:52,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2024-12-15 00:43:53,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:43:53,405 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents'
2024-12-15 00:43:53,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None
2024-12-15 00:43:53,860 [ scc.repo] DEBUG # ... Include label: dependencies
2024-12-15 00:43:54,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2024-12-15 00:43:54,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:43:55,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-15 00:43:55,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2024-12-15 00:43:56,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:43:56,264 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2024-12-15 00:43:56,264 [ scc.repo] DEBUG ## Branches found:
2024-12-15 00:43:56,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-12-15 00:43:56,264 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:43:56,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:43:56,271 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-15 00:43:56,275 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-15 00:43:56,276 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-15 00:43:56,281 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-15 00:43:56,286 [ scc.git] DEBUG Already up to date.
2024-12-15 00:43:56,286 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head'
2024-12-15 00:43:56,604 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-15 00:43:56,604 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD
2024-12-15 00:43:56,609 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head'
2024-12-15 00:43:56,905 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-15 00:43:56,905 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD
2024-12-15 00:43:56,909 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head'
2024-12-15 00:43:57,193 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-15 00:43:57,193 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD
2024-12-15 00:43:57,197 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head'
2024-12-15 00:43:57,480 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-15 00:43:57,480 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD
2024-12-15 00:43:57,485 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head'
2024-12-15 00:43:57,806 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-15 00:43:57,806 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD
2024-12-15 00:43:57,811 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head'
2024-12-15 00:43:58,107 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-15 00:43:58,107 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD
2024-12-15 00:43:58,111 [ scc.git] DEBUG ## Unique users: []
2024-12-15 00:43:58,111 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:43:58,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:43:58,117 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2024-12-15 00:43:58,122 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:43:58,126 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2024-12-15 00:43:58,329 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-15 00:43:58,334 [ scc.git] DEBUG package-lock.json | 12 ++++++------
2024-12-15 00:43:58,334 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-)
2024-12-15 00:43:58,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:43:58,474 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b'
2024-12-15 00:43:58,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:43:58,484 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b'
2024-12-15 00:43:58,565 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-15 00:43:58,565 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-15 00:43:58,571 [ scc.git] DEBUG package-lock.json | 625 +++---------------------------------------------------
2024-12-15 00:43:58,571 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-)
2024-12-15 00:43:58,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:43:58,858 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2024-12-15 00:43:58,902 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:43:58,908 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2024-12-15 00:43:59,014 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-15 00:43:59,014 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2024-12-15 00:43:59,014 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-15 00:43:59,015 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-15 00:43:59,021 [ scc.git] DEBUG Calling 'git reset --hard cceb78e371a2fdb8025ead7ebf64d60e05cd4a81'
2024-12-15 00:43:59,028 [ scc.git] DEBUG HEAD is now at cceb78e merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents)
2024-12-15 00:43:59,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:43:59,243 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2024-12-15 00:43:59,249 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2024-12-15 00:43:59,255 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#279](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
--conflicts
2024-12-15 00:43:59,261 [ scc.config] DEBUG Found github.token
2024-12-15 00:43:59,261 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts.
2024-12-15 00:43:59,261 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2024-12-15 00:43:59,267 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:43:59,273 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2024-12-15 00:43:59,406 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-15 00:43:59,407 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-15 00:43:59,412 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++-----
2024-12-15 00:43:59,412 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-)
2024-12-15 00:43:59,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:43:59,626 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c'
2024-12-15 00:43:59,633 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:43:59,637 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c'
2024-12-15 00:43:59,693 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-15 00:43:59,693 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-15 00:43:59,698 [ scc.git] DEBUG package-lock.json | 6 +++---
2024-12-15 00:43:59,698 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-)
2024-12-15 00:44:00,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:44:00,012 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2024-12-15 00:44:00,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:00,108 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2024-12-15 00:44:00,194 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-15 00:44:00,195 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2024-12-15 00:44:00,195 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-15 00:44:00,195 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-15 00:44:00,202 [ scc.git] DEBUG Calling 'git reset --hard f8cad5d2941a29cc75ed5421543b79283fa81c4b'
2024-12-15 00:44:00,209 [ scc.git] DEBUG HEAD is now at f8cad5d merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2024-12-15 00:44:00,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:44:00,393 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2024-12-15 00:44:00,399 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2024-12-15 00:44:00,404 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#279](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
--conflicts
2024-12-15 00:44:00,409 [ scc.config] DEBUG Found github.token
2024-12-15 00:44:00,409 [ scc.git] DEBUG Adding comment to issue #118.
2024-12-15 00:44:01,203 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 201 2394
2024-12-15 00:44:01,205 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-15 00:44:01,245 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:01,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:01,250 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-15 00:44:01,289 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-15 00:44:01,297 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff886c9f40> has no local changes
2024-12-15 00:44:01,297 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Generated by OMERO-plugins-push#279 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/)'
2024-12-15 00:44:01,307 [ scc.git] DEBUG [detached HEAD 16c0c17] merge master -Dorg -Ssuccess-only
2024-12-15 00:44:01,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:44:01,307 [ scc.repo] DEBUG ## PRs found:
2024-12-15 00:44:01,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2024-12-15 00:44:02,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None
2024-12-15 00:44:02,243 [ scc.repo] DEBUG # ... Include label: dependencies
2024-12-15 00:44:02,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2024-12-15 00:44:03,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:44:03,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-15 00:44:04,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2024-12-15 00:44:04,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:44:04,843 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2024-12-15 00:44:05,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None
2024-12-15 00:44:05,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None
2024-12-15 00:44:06,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2024-12-15 00:44:06,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2024-12-15 00:44:07,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-12-15 00:44:07,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:44:08,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-15 00:44:08,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-12-15 00:44:09,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:44:09,166 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2024-12-15 00:44:09,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2024-12-15 00:44:10,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2024-12-15 00:44:10,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-12-15 00:44:11,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:44:11,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-15 00:44:11,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-12-15 00:44:12,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:44:12,357 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2024-12-15 00:44:12,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2024-12-15 00:44:13,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2024-12-15 00:44:13,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-12-15 00:44:14,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:44:14,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-12-15 00:44:15,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:44:15,202 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2024-12-15 00:44:15,203 [ scc.repo] DEBUG ## Branches found:
2024-12-15 00:44:15,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-12-15 00:44:15,203 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:15,203 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:15,208 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-15 00:44:15,213 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-15 00:44:15,213 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-15 00:44:15,219 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-15 00:44:15,224 [ scc.git] DEBUG Already up to date.
2024-12-15 00:44:15,224 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2024-12-15 00:44:16,490 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-12-15 00:44:16,490 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2024-12-15 00:44:16,495 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2024-12-15 00:44:17,043 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-12-15 00:44:17,043 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2024-12-15 00:44:17,048 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2024-12-15 00:44:17,368 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-12-15 00:44:17,368 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2024-12-15 00:44:17,372 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head'
2024-12-15 00:44:17,660 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-12-15 00:44:17,661 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD
2024-12-15 00:44:17,665 [ scc.git] DEBUG ## Unique users: []
2024-12-15 00:44:17,665 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:17,665 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:17,670 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-12-15 00:44:17,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:17,681 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-12-15 00:44:17,842 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2024-12-15 00:44:17,844 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-15 00:44:17,847 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2024-12-15 00:44:17,847 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2024-12-15 00:44:17,847 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2024-12-15 00:44:18,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:44:18,006 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2024-12-15 00:44:18,014 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:18,020 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2024-12-15 00:44:18,691 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2024-12-15 00:44:18,691 [ scc.git] DEBUG Auto-merging src/app/context.js
2024-12-15 00:44:18,691 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2024-12-15 00:44:18,691 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2024-12-15 00:44:18,692 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-15 00:44:18,696 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2024-12-15 00:44:18,696 [ scc.git] DEBUG src/app/context.js | 6 +-
2024-12-15 00:44:18,696 [ scc.git] DEBUG src/app/header.html | 5 +
2024-12-15 00:44:18,696 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2024-12-15 00:44:18,696 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2024-12-15 00:44:18,696 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2024-12-15 00:44:18,696 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2024-12-15 00:44:18,697 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2024-12-15 00:44:18,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:44:18,832 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2024-12-15 00:44:18,841 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:18,846 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2024-12-15 00:44:19,114 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2024-12-15 00:44:19,115 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-15 00:44:19,119 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2024-12-15 00:44:19,119 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2024-12-15 00:44:19,119 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2024-12-15 00:44:19,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:44:19,282 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2024-12-15 00:44:19,291 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:19,296 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2024-12-15 00:44:19,410 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-15 00:44:19,420 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++---------------------------
2024-12-15 00:44:19,420 [ scc.git] DEBUG package.json | 2 +-
2024-12-15 00:44:19,420 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-)
2024-12-15 00:44:19,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:44:19,672 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-15 00:44:19,713 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:19,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:19,719 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-15 00:44:19,759 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-15 00:44:19,769 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff8862b610> has no local changes
2024-12-15 00:44:19,770 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Generated by OMERO-plugins-push#279 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/)'
2024-12-15 00:44:19,782 [ scc.git] DEBUG [detached HEAD 25cf5f8] merge master -Dorg -Ssuccess-only
2024-12-15 00:44:19,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:44:19,783 [ scc.repo] DEBUG ## PRs found:
2024-12-15 00:44:20,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2024-12-15 00:44:20,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2024-12-15 00:44:21,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2024-12-15 00:44:21,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-12-15 00:44:22,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:44:22,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-12-15 00:44:23,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:44:23,134 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2024-12-15 00:44:23,134 [ scc.repo] DEBUG ## Branches found:
2024-12-15 00:44:23,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-12-15 00:44:23,135 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:23,135 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:23,141 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-15 00:44:23,145 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-15 00:44:23,145 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-15 00:44:23,150 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-15 00:44:23,156 [ scc.git] DEBUG Already up to date.
2024-12-15 00:44:23,156 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2024-12-15 00:44:23,749 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2024-12-15 00:44:23,749 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2024-12-15 00:44:23,754 [ scc.git] DEBUG ## Unique users: []
2024-12-15 00:44:23,754 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:23,754 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:23,759 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-12-15 00:44:23,765 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:23,770 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-12-15 00:44:23,780 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-15 00:44:23,783 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2024-12-15 00:44:23,783 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2024-12-15 00:44:23,783 [ scc.git] DEBUG requirements.txt | 2 +-
2024-12-15 00:44:23,783 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2024-12-15 00:44:23,783 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2024-12-15 00:44:23,783 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2024-12-15 00:44:23,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:44:23,914 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-15 00:44:23,954 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:23,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:23,960 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-15 00:44:23,998 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-15 00:44:24,005 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff8863dbb0> has no local changes
2024-12-15 00:44:24,005 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Generated by OMERO-plugins-push#279 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/)'
2024-12-15 00:44:24,013 [ scc.git] DEBUG [detached HEAD 7c8016f] merge master -Dorg -Ssuccess-only
2024-12-15 00:44:24,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:44:24,013 [ scc.repo] DEBUG ## PRs found:
2024-12-15 00:44:24,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2024-12-15 00:44:24,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2024-12-15 00:44:25,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2024-12-15 00:44:25,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-12-15 00:44:26,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:44:26,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-12-15 00:44:27,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:44:27,244 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-12-15 00:44:27,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2024-12-15 00:44:28,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2024-12-15 00:44:28,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-12-15 00:44:29,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:44:29,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-12-15 00:44:30,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:44:30,259 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-12-15 00:44:30,259 [ scc.repo] DEBUG ## Branches found:
2024-12-15 00:44:30,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-12-15 00:44:30,260 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:30,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:30,266 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-15 00:44:30,270 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-15 00:44:30,271 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-15 00:44:30,276 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-15 00:44:30,281 [ scc.git] DEBUG Already up to date.
2024-12-15 00:44:30,281 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2024-12-15 00:44:30,736 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-12-15 00:44:30,736 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2024-12-15 00:44:30,740 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2024-12-15 00:44:31,211 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-12-15 00:44:31,211 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2024-12-15 00:44:31,217 [ scc.git] DEBUG ## Unique users: []
2024-12-15 00:44:31,217 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:31,217 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:31,223 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-12-15 00:44:31,229 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:31,234 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-12-15 00:44:31,340 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2024-12-15 00:44:31,340 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2024-12-15 00:44:31,340 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-12-15 00:44:31,340 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-12-15 00:44:31,340 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-15 00:44:31,341 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-15 00:44:31,347 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997'
2024-12-15 00:44:31,354 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build
2024-12-15 00:44:31,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:44:31,487 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-12-15 00:44:31,495 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..3cd120cf6f10f71421a4db91fa87baba865c7997'
2024-12-15 00:44:31,530 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#279](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/cli.py
- src/omero_metadata/populate.py
--conflicts
2024-12-15 00:44:31,537 [ scc.config] DEBUG Found github.token
2024-12-15 00:44:31,537 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2024-12-15 00:44:31,537 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2024-12-15 00:44:31,545 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:31,550 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2024-12-15 00:44:31,665 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-12-15 00:44:31,665 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-12-15 00:44:31,665 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2024-12-15 00:44:31,665 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-15 00:44:31,665 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-15 00:44:31,672 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997'
2024-12-15 00:44:31,680 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build
2024-12-15 00:44:31,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:44:31,897 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 78e55539b68e351ed5ef202854718b49a37729a7'
2024-12-15 00:44:31,905 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..3cd120cf6f10f71421a4db91fa87baba865c7997'
2024-12-15 00:44:31,910 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#279](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2024-12-15 00:44:31,915 [ scc.config] DEBUG Found github.token
2024-12-15 00:44:31,916 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2024-12-15 00:44:31,916 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-15 00:44:31,955 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:31,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:31,960 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-15 00:44:31,998 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-15 00:44:32,007 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff885e5880> has no local changes
2024-12-15 00:44:32,007 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Already up to date.
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#279 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/)'
2024-12-15 00:44:32,015 [ scc.git] DEBUG [detached HEAD ea690bf] merge master -Dorg -Ssuccess-only
2024-12-15 00:44:32,016 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:44:32,016 [ scc.repo] DEBUG ## PRs found:
2024-12-15 00:44:32,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2024-12-15 00:44:32,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None
2024-12-15 00:44:33,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2024-12-15 00:44:33,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2024-12-15 00:44:34,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2024-12-15 00:44:34,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2024-12-15 00:44:35,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2024-12-15 00:44:35,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2024-12-15 00:44:35,791 [ scc.repo] DEBUG ## Branches found:
2024-12-15 00:44:35,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-12-15 00:44:35,792 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:35,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:35,797 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-15 00:44:35,802 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-15 00:44:35,802 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-15 00:44:35,807 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-15 00:44:35,812 [ scc.git] DEBUG Already up to date.
2024-12-15 00:44:35,812 [ scc.git] DEBUG ## Unique users: []
2024-12-15 00:44:35,812 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:35,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:35,817 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-15 00:44:35,853 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:35,854 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:35,859 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-15 00:44:35,895 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-15 00:44:35,902 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff885e5670> has no local changes
2024-12-15 00:44:35,902 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Generated by OMERO-plugins-push#279 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/)'
2024-12-15 00:44:35,911 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:44:35,911 [ scc.git] DEBUG [detached HEAD 7429b3f] merge master -Dorg -Ssuccess-only
2024-12-15 00:44:35,911 [ scc.repo] DEBUG ## PRs found:
2024-12-15 00:44:36,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2024-12-15 00:44:36,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/15 HTTP/1.1" 200 None
2024-12-15 00:44:37,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332 HTTP/1.1" 200 None
2024-12-15 00:44:37,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:44:38,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-15 00:44:38,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None
2024-12-15 00:44:39,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-12-15 00:44:39,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:44:40,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-12-15 00:44:40,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:44:40,580 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel'
2024-12-15 00:44:40,580 [ scc.repo] DEBUG ## Branches found:
2024-12-15 00:44:40,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-12-15 00:44:40,581 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:40,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:40,587 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-15 00:44:40,592 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-15 00:44:40,592 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-15 00:44:40,597 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-15 00:44:40,602 [ scc.git] DEBUG Already up to date.
2024-12-15 00:44:40,602 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-12-15 00:44:40,904 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2024-12-15 00:44:40,904 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-12-15 00:44:40,908 [ scc.git] DEBUG ## Unique users: []
2024-12-15 00:44:40,909 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:40,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:40,915 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-12-15 00:44:40,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:40,926 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-12-15 00:44:40,935 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-15 00:44:41,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:44:41,067 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-15 00:44:41,111 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:41,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:41,118 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-15 00:44:41,158 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-15 00:44:41,165 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff8865bf40> has no local changes
2024-12-15 00:44:41,165 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Excluded PRs:
- PR 15 jburel 'Build' (status: failure)
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Generated by OMERO-plugins-push#279 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/)'
2024-12-15 00:44:41,173 [ scc.git] DEBUG [detached HEAD f36a9b9] merge master -Dorg -Ssuccess-only
2024-12-15 00:44:41,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:44:41,173 [ scc.repo] DEBUG ## PRs found:
2024-12-15 00:44:41,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2024-12-15 00:44:42,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/29 HTTP/1.1" 200 None
2024-12-15 00:44:42,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-12-15 00:44:43,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:44:43,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-12-15 00:44:43,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24?per_page=1 HTTP/1.1" 200 None
2024-12-15 00:44:44,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-12-15 00:44:44,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/status HTTP/1.1" 200 None
2024-12-15 00:44:44,926 [ scc.repo] DEBUG - PR 29 jburel 'Build'
2024-12-15 00:44:45,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None
2024-12-15 00:44:45,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None
2024-12-15 00:44:46,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None
2024-12-15 00:44:46,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-12-15 00:44:47,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:44:47,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-12-15 00:44:48,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:44:48,064 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-12-15 00:44:48,064 [ scc.repo] DEBUG ## Branches found:
2024-12-15 00:44:48,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-12-15 00:44:48,065 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:48,065 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:48,071 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-15 00:44:48,076 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-15 00:44:48,076 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-15 00:44:48,081 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-15 00:44:48,087 [ scc.git] DEBUG Already up to date.
2024-12-15 00:44:48,087 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head'
2024-12-15 00:44:48,426 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-12-15 00:44:48,426 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD
2024-12-15 00:44:48,431 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head'
2024-12-15 00:44:49,122 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-12-15 00:44:49,122 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD
2024-12-15 00:44:49,126 [ scc.git] DEBUG ## Unique users: []
2024-12-15 00:44:49,127 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:49,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:49,132 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61'
2024-12-15 00:44:49,138 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:49,143 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61'
2024-12-15 00:44:49,165 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py
2024-12-15 00:44:49,165 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-15 00:44:49,168 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++
2024-12-15 00:44:49,168 [ scc.git] DEBUG 1 file changed, 33 insertions(+)
2024-12-15 00:44:49,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:44:49,298 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24'
2024-12-15 00:44:49,305 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:49,311 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Build) 92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24'
2024-12-15 00:44:49,420 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-15 00:44:49,423 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-12-15 00:44:49,423 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-12-15 00:44:49,423 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 6 deletions(-)
2024-12-15 00:44:49,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:44:49,686 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-15 00:44:49,727 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:49,727 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:49,732 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-15 00:44:49,771 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-15 00:44:49,778 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff8860e730> has no local changes
2024-12-15 00:44:49,778 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
- PR 29 jburel 'Build'
Generated by OMERO-plugins-push#279 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/)'
2024-12-15 00:44:49,787 [ scc.git] DEBUG [detached HEAD 92dcefd] merge master -Dorg -Ssuccess-only
2024-12-15 00:44:49,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:44:49,788 [ scc.repo] DEBUG ## PRs found:
2024-12-15 00:44:50,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2024-12-15 00:44:50,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2024-12-15 00:44:51,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2024-12-15 00:44:51,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-12-15 00:44:52,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:44:52,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-12-15 00:44:52,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:44:52,901 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2024-12-15 00:44:52,901 [ scc.repo] DEBUG ## Branches found:
2024-12-15 00:44:52,901 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-12-15 00:44:52,901 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:52,902 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:52,908 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-15 00:44:52,913 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-15 00:44:52,914 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-15 00:44:52,924 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-15 00:44:52,934 [ scc.git] DEBUG Updating c8610db..be76813
2024-12-15 00:44:53,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls/21 HTTP/1.1" 200 None
2024-12-15 00:44:53,540 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-12-15 00:44:53,917 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-12-15 00:44:53,917 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-12-15 00:44:53,923 [ scc.git] DEBUG ## Unique users: []
2024-12-15 00:44:53,923 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:53,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:53,929 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-12-15 00:44:53,935 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:53,940 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-12-15 00:44:53,985 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2024-12-15 00:44:53,985 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2024-12-15 00:44:53,985 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2024-12-15 00:44:53,985 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2024-12-15 00:44:53,985 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2024-12-15 00:44:53,985 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2024-12-15 00:44:53,985 [ scc.git] DEBUG Auto-merging setup.py
2024-12-15 00:44:53,985 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2024-12-15 00:44:53,985 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-15 00:44:53,986 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-15 00:44:53,992 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e'
2024-12-15 00:44:53,999 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build
2024-12-15 00:44:54,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:44:54,133 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-12-15 00:44:54,140 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e'
2024-12-15 00:44:54,146 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#279](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/urls.py
- omero_signup/signup_settings.py
- setup.py
- omero_signup/views.py
--conflicts
2024-12-15 00:44:54,152 [ scc.config] DEBUG Found github.token
2024-12-15 00:44:54,153 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2024-12-15 00:44:54,153 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-15 00:44:54,193 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:44:54,193 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:44:54,199 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-15 00:44:54,238 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-15 00:44:54,244 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff8860e610> has no local changes
2024-12-15 00:44:54,244 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Updating c8610db..be76813
Previously merged:
- PR 21 jburel 'Build'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#279 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/)'
2024-12-15 00:44:54,252 [ scc.git] DEBUG [detached HEAD 5e390a6] merge master -Dorg -Ssuccess-only
2024-12-15 00:44:54,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:44:54,252 [ scc.repo] DEBUG ## PRs found:
2024-12-15 00:44:54,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2024-12-15 00:44:55,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None
2024-12-15 00:44:55,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None
2024-12-15 00:44:56,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None
2024-12-15 00:44:56,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:44:57,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-15 00:44:57,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None
2024-12-15 00:44:58,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None
2024-12-15 00:44:58,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2024-12-15 00:44:59,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2024-12-15 00:44:59,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-12-15 00:45:00,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:45:00,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-12-15 00:45:00,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:45:00,971 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-12-15 00:45:00,971 [ scc.repo] DEBUG ## Branches found:
2024-12-15 00:45:00,971 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-12-15 00:45:00,971 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:00,971 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:00,978 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-15 00:45:00,984 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-15 00:45:00,984 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-15 00:45:00,990 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-15 00:45:00,996 [ scc.git] DEBUG Already up to date.
2024-12-15 00:45:00,996 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2024-12-15 00:45:01,366 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2024-12-15 00:45:01,366 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2024-12-15 00:45:01,371 [ scc.git] DEBUG ## Unique users: []
2024-12-15 00:45:01,371 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:01,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:01,377 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2024-12-15 00:45:01,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:01,388 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2024-12-15 00:45:01,408 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-15 00:45:01,411 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2024-12-15 00:45:01,411 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2024-12-15 00:45:01,411 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2024-12-15 00:45:01,411 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2024-12-15 00:45:01,411 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2024-12-15 00:45:01,411 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2024-12-15 00:45:01,411 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2024-12-15 00:45:01,411 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2024-12-15 00:45:01,411 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2024-12-15 00:45:01,413 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2024-12-15 00:45:01,413 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2024-12-15 00:45:01,413 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2024-12-15 00:45:01,413 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2024-12-15 00:45:01,413 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2024-12-15 00:45:01,413 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2024-12-15 00:45:01,413 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2024-12-15 00:45:01,413 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2024-12-15 00:45:01,413 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2024-12-15 00:45:01,413 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2024-12-15 00:45:01,414 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2024-12-15 00:45:01,414 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2024-12-15 00:45:01,414 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2024-12-15 00:45:01,414 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2024-12-15 00:45:01,414 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2024-12-15 00:45:01,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:01,556 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-15 00:45:01,598 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:01,598 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:01,604 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-15 00:45:01,644 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-15 00:45:01,651 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff8860dd60> has no local changes
2024-12-15 00:45:01,652 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Generated by OMERO-plugins-push#279 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/)'
2024-12-15 00:45:01,661 [ scc.git] DEBUG [detached HEAD 5e81b8f] merge master -Dorg -Ssuccess-only
2024-12-15 00:45:01,662 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:01,662 [ scc.repo] DEBUG ## PRs found:
2024-12-15 00:45:02,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2024-12-15 00:45:02,011 [ scc.repo] DEBUG ## Branches found:
2024-12-15 00:45:02,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-12-15 00:45:02,011 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:02,011 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:02,017 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-15 00:45:02,022 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-15 00:45:02,022 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-15 00:45:02,027 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-15 00:45:02,033 [ scc.git] DEBUG Already up to date.
2024-12-15 00:45:02,033 [ scc.git] DEBUG ## Unique users: []
2024-12-15 00:45:02,034 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:02,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:02,038 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-15 00:45:02,079 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:02,079 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:02,085 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-15 00:45:02,125 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-15 00:45:02,132 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff88659bb0> has no local changes
2024-12-15 00:45:02,132 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Generated by OMERO-plugins-push#279 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/)'
2024-12-15 00:45:02,141 [ scc.git] DEBUG [detached HEAD 5ce16b5] merge master -Dorg -Ssuccess-only
2024-12-15 00:45:02,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:02,142 [ scc.repo] DEBUG ## PRs found:
2024-12-15 00:45:02,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None
2024-12-15 00:45:02,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None
2024-12-15 00:45:03,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20/comments HTTP/1.1" 200 None
2024-12-15 00:45:03,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None
2024-12-15 00:45:04,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:45:04,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-15 00:45:05,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None
2024-12-15 00:45:05,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:45:05,752 [ scc.repo] DEBUG - PR 20 jburel 'Build'
2024-12-15 00:45:05,752 [ scc.repo] DEBUG ## Branches found:
2024-12-15 00:45:05,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-12-15 00:45:05,752 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:05,752 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:05,758 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-15 00:45:05,764 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-15 00:45:05,764 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-15 00:45:05,770 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-15 00:45:05,776 [ scc.git] DEBUG Already up to date.
2024-12-15 00:45:05,776 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head'
2024-12-15 00:45:06,329 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope
2024-12-15 00:45:06,329 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD
2024-12-15 00:45:06,334 [ scc.git] DEBUG ## Unique users: []
2024-12-15 00:45:06,334 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:06,334 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:06,340 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea'
2024-12-15 00:45:06,346 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:06,351 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea'
2024-12-15 00:45:06,412 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-15 00:45:06,415 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-12-15 00:45:06,415 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-12-15 00:45:06,415 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++
2024-12-15 00:45:06,415 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-)
2024-12-15 00:45:06,415 [ scc.git] DEBUG create mode 100755 .omeroci/app-build
2024-12-15 00:45:06,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:06,555 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-15 00:45:06,595 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:06,595 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:06,602 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-15 00:45:06,643 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-15 00:45:06,650 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff88601f70> has no local changes
2024-12-15 00:45:06,650 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Already up to date.
Merged PRs:
- PR 20 jburel 'Build'
Generated by OMERO-plugins-push#279 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/)'
2024-12-15 00:45:06,659 [ scc.git] DEBUG [detached HEAD f21ce14] merge master -Dorg -Ssuccess-only
2024-12-15 00:45:06,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:06,660 [ scc.git] INFO Overriding base-branch from master to main
2024-12-15 00:45:06,660 [ scc.repo] DEBUG ## PRs found:
2024-12-15 00:45:07,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2024-12-15 00:45:07,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None
2024-12-15 00:45:07,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None
2024-12-15 00:45:08,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None
2024-12-15 00:45:08,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:45:09,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-15 00:45:09,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17 HTTP/1.1" 200 None
2024-12-15 00:45:10,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17/comments HTTP/1.1" 200 None
2024-12-15 00:45:10,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/95ff08b2a68cca22dc7cb6eb56b8b2faa53012bc HTTP/1.1" 200 None
2024-12-15 00:45:11,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/95ff08b2a68cca22dc7cb6eb56b8b2faa53012bc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:45:11,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/95ff08b2a68cca22dc7cb6eb56b8b2faa53012bc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-15 00:45:12,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/95ff08b2a68cca22dc7cb6eb56b8b2faa53012bc HTTP/1.1" 200 None
2024-12-15 00:45:12,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/95ff08b2a68cca22dc7cb6eb56b8b2faa53012bc?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:45:12,696 [ scc.repo] DEBUG - PR 17 jburel 'Build'
2024-12-15 00:45:13,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2024-12-15 00:45:13,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2024-12-15 00:45:14,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2024-12-15 00:45:14,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-12-15 00:45:15,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:45:15,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-12-15 00:45:15,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:45:15,869 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-12-15 00:45:15,869 [ scc.repo] DEBUG ## Branches found:
2024-12-15 00:45:15,869 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-12-15 00:45:15,869 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:15,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:15,876 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2024-12-15 00:45:15,880 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-15 00:45:15,881 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2024-12-15 00:45:15,886 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2024-12-15 00:45:15,891 [ scc.git] DEBUG Already up to date.
2024-12-15 00:45:15,891 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2024-12-15 00:45:16,332 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2024-12-15 00:45:16,333 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2024-12-15 00:45:16,337 [ scc.git] DEBUG Calling 'git fetch origin pull/17/head'
2024-12-15 00:45:16,759 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2024-12-15 00:45:16,759 [ scc.git] DEBUG * branch refs/pull/17/head -> FETCH_HEAD
2024-12-15 00:45:16,761 [ scc.git] DEBUG ## Unique users: []
2024-12-15 00:45:16,762 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:16,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:16,767 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-12-15 00:45:16,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:16,777 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-12-15 00:45:16,801 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2024-12-15 00:45:16,801 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2024-12-15 00:45:16,801 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-15 00:45:16,802 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-15 00:45:16,808 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-12-15 00:45:16,815 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0
2024-12-15 00:45:16,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:16,952 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-12-15 00:45:16,958 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-12-15 00:45:16,963 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#279](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2024-12-15 00:45:16,968 [ scc.config] DEBUG Found github.token
2024-12-15 00:45:16,969 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2024-12-15 00:45:16,969 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...95ff08b2a68cca22dc7cb6eb56b8b2faa53012bc'
2024-12-15 00:45:16,974 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:16,979 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 17 (Build) 95ff08b2a68cca22dc7cb6eb56b8b2faa53012bc'
2024-12-15 00:45:16,989 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-15 00:45:16,992 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-12-15 00:45:16,992 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-12-15 00:45:16,992 [ scc.git] DEBUG .omeroci/app-deps | 12 ++++++++++++
2024-12-15 00:45:16,992 [ scc.git] DEBUG omero_web_zarr/utils.py | 18 +++++++++---------
2024-12-15 00:45:16,992 [ scc.git] DEBUG setup.py | 38 +++++++++++++++++++-------------------
2024-12-15 00:45:16,992 [ scc.git] DEBUG test/integration/test_ngff.py | 2 +-
2024-12-15 00:45:16,992 [ scc.git] DEBUG 6 files changed, 49 insertions(+), 35 deletions(-)
2024-12-15 00:45:16,992 [ scc.git] DEBUG create mode 100755 .omeroci/app-deps
2024-12-15 00:45:17,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:17,343 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-15 00:45:17,383 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:17,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:17,389 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-15 00:45:17,428 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-15 00:45:17,435 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff88583af0> has no local changes
2024-12-15 00:45:17,435 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Merged PRs:
- PR 17 jburel 'Build'
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#279 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/)'
2024-12-15 00:45:17,443 [ scc.git] DEBUG [detached HEAD b1bbc83] merge master -Dorg -Ssuccess-only
2024-12-15 00:45:17,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:17,443 [ scc.repo] DEBUG ## PRs found:
2024-12-15 00:45:17,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2024-12-15 00:45:17,754 [ scc.repo] DEBUG ## Branches found:
2024-12-15 00:45:17,754 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-12-15 00:45:17,754 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:17,754 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:17,759 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-15 00:45:17,764 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-15 00:45:17,764 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-15 00:45:17,769 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-15 00:45:17,774 [ scc.git] DEBUG Already up to date.
2024-12-15 00:45:17,775 [ scc.git] DEBUG ## Unique users: []
2024-12-15 00:45:17,775 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:17,775 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:17,780 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-15 00:45:17,819 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:17,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:17,826 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-15 00:45:17,864 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-15 00:45:17,870 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff88583a30> has no local changes
2024-12-15 00:45:17,871 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Generated by OMERO-plugins-push#279 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/)'
2024-12-15 00:45:17,878 [ scc.git] DEBUG [detached HEAD 8c64207] merge master -Dorg -Ssuccess-only
2024-12-15 00:45:17,879 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:17,879 [ scc.repo] DEBUG ## PRs found:
2024-12-15 00:45:18,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2024-12-15 00:45:18,175 [ scc.repo] DEBUG ## Branches found:
2024-12-15 00:45:18,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-12-15 00:45:18,175 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:18,175 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:18,181 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-15 00:45:18,186 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-15 00:45:18,186 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-15 00:45:18,192 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-15 00:45:18,198 [ scc.git] DEBUG Already up to date.
2024-12-15 00:45:18,198 [ scc.git] DEBUG ## Unique users: []
2024-12-15 00:45:18,198 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:18,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:18,203 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-15 00:45:18,242 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:18,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:18,247 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-15 00:45:18,285 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-15 00:45:18,292 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff885298b0> has no local changes
2024-12-15 00:45:18,292 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Generated by OMERO-plugins-push#279 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/)'
2024-12-15 00:45:18,301 [ scc.git] DEBUG [detached HEAD c08ba5b] merge master -Dorg -Ssuccess-only
2024-12-15 00:45:18,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:18,301 [ scc.repo] DEBUG ## PRs found:
2024-12-15 00:45:18,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2024-12-15 00:45:19,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2024-12-15 00:45:19,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2024-12-15 00:45:20,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-12-15 00:45:20,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:45:21,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-12-15 00:45:21,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:45:21,500 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2024-12-15 00:45:21,500 [ scc.repo] DEBUG ## Branches found:
2024-12-15 00:45:21,500 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-12-15 00:45:21,500 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:21,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:21,506 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-15 00:45:21,511 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-15 00:45:21,512 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-15 00:45:21,518 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-15 00:45:21,524 [ scc.git] DEBUG Already up to date.
2024-12-15 00:45:21,524 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2024-12-15 00:45:21,857 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2024-12-15 00:45:21,858 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2024-12-15 00:45:21,862 [ scc.git] DEBUG ## Unique users: []
2024-12-15 00:45:21,863 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:21,863 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:21,869 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-12-15 00:45:21,874 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:21,879 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-12-15 00:45:21,979 [ scc.git] DEBUG Auto-merging Dockerfile
2024-12-15 00:45:21,979 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2024-12-15 00:45:21,979 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-15 00:45:21,980 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-15 00:45:21,987 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-12-15 00:45:21,995 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2024-12-15 00:45:22,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:22,132 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-12-15 00:45:22,139 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-12-15 00:45:22,145 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#279](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2024-12-15 00:45:22,150 [ scc.config] DEBUG Found github.token
2024-12-15 00:45:22,151 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2024-12-15 00:45:22,151 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-15 00:45:22,191 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:22,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:22,197 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-15 00:45:22,236 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-15 00:45:22,244 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff885295b0> has no local changes
2024-12-15 00:45:22,244 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#279 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/)'
2024-12-15 00:45:22,253 [ scc.git] DEBUG [detached HEAD ea195ae] merge master -Dorg -Ssuccess-only
2024-12-15 00:45:22,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:22,253 [ scc.git] INFO Overriding base-branch from master to develop
2024-12-15 00:45:22,253 [ scc.repo] DEBUG ## PRs found:
2024-12-15 00:45:22,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-12-15 00:45:23,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-12-15 00:45:23,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-12-15 00:45:24,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-12-15 00:45:24,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:45:25,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-15 00:45:25,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-12-15 00:45:25,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:45:25,862 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-12-15 00:45:26,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-12-15 00:45:26,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-12-15 00:45:27,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None
2024-12-15 00:45:27,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-12-15 00:45:28,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-12-15 00:45:28,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-12-15 00:45:29,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-15 00:45:29,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-12-15 00:45:30,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-12-15 00:45:30,024 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-12-15 00:45:30,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-12-15 00:45:31,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-12-15 00:45:31,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-12-15 00:45:31,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-12-15 00:45:31,978 [ scc.repo] DEBUG ## Branches found:
2024-12-15 00:45:31,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-12-15 00:45:31,979 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:31,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:31,985 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-12-15 00:45:31,990 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-15 00:45:31,990 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-12-15 00:45:31,996 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-12-15 00:45:32,001 [ scc.git] DEBUG Already up to date.
2024-12-15 00:45:32,002 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-12-15 00:45:32,456 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-12-15 00:45:32,456 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-12-15 00:45:32,461 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-12-15 00:45:32,761 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-12-15 00:45:32,762 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-12-15 00:45:32,766 [ scc.git] DEBUG ## Unique users: []
2024-12-15 00:45:32,766 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:32,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:32,772 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-12-15 00:45:32,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:32,785 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-12-15 00:45:32,886 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-12-15 00:45:32,886 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-12-15 00:45:32,886 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-15 00:45:32,886 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-15 00:45:32,893 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-12-15 00:45:32,900 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-12-15 00:45:33,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:33,043 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-12-15 00:45:33,052 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-12-15 00:45:33,057 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#279](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-12-15 00:45:33,062 [ scc.config] DEBUG Found github.token
2024-12-15 00:45:33,062 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-12-15 00:45:33,062 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-12-15 00:45:33,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:33,072 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-12-15 00:45:33,082 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-15 00:45:33,084 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-12-15 00:45:33,084 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-12-15 00:45:33,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:33,446 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-15 00:45:33,486 [ scc.git] DEBUG Get sha1 of %s
2024-12-15 00:45:33,487 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-15 00:45:33,492 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-15 00:45:33,530 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-15 00:45:33,537 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff885bcf10> has no local changes
2024-12-15 00:45:33,537 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#279 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/)'
2024-12-15 00:45:33,545 [ scc.git] DEBUG [detached HEAD ef09915] merge master -Dorg -Ssuccess-only
2024-12-15 00:45:33,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:33,546 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-15 00:45:33,622 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2024-12-15 00:45:33,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:33,846 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2024-12-15 00:45:33,851 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2024-12-15 00:45:34,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:34,237 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2024-12-15 00:45:34,242 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2024-12-15 00:45:34,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:34,628 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2024-12-15 00:45:34,632 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2024-12-15 00:45:35,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:35,018 [ scc.config] DEBUG Found submodule.omero-figure.url
2024-12-15 00:45:35,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:35,398 [ scc.config] DEBUG Found submodule.omero-figure.branch
2024-12-15 00:45:35,403 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2024-12-15 00:45:35,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:35,795 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2024-12-15 00:45:35,801 [ scc.config] DEBUG Found submodule.omero-gallery.url
2024-12-15 00:45:36,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:36,215 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2024-12-15 00:45:36,220 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2024-12-15 00:45:36,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:36,604 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2024-12-15 00:45:36,609 [ scc.config] DEBUG Found submodule.omero-mapr.url
2024-12-15 00:45:36,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:37,004 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2024-12-15 00:45:37,010 [ scc.config] DEBUG Found submodule.omero-metadata.url
2024-12-15 00:45:37,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:37,386 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2024-12-15 00:45:37,390 [ scc.config] DEBUG Found submodule.omero-parade.url
2024-12-15 00:45:37,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:37,774 [ scc.config] DEBUG Found submodule.omero-parade.branch
2024-12-15 00:45:37,779 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2024-12-15 00:45:38,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:38,166 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2024-12-15 00:45:38,170 [ scc.config] DEBUG Found submodule.omero-rois.url
2024-12-15 00:45:38,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:38,568 [ scc.config] DEBUG Found submodule.omero-signup.url
2024-12-15 00:45:38,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:38,975 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2024-12-15 00:45:39,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:39,363 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2024-12-15 00:45:39,369 [ scc.config] DEBUG Found submodule.omero-upload.url
2024-12-15 00:45:39,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:39,784 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2024-12-15 00:45:40,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:40,165 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2024-12-15 00:45:40,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:40,564 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2024-12-15 00:45:40,569 [ scc.config] DEBUG Found submodule.omero-weberror.url
2024-12-15 00:45:40,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:40,960 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2024-12-15 00:45:40,965 [ scc.config] DEBUG Found submodule.omero-webtest.url
2024-12-15 00:45:41,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:41,351 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2024-12-15 00:45:41,356 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2024-12-15 00:45:41,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:41,736 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2024-12-15 00:45:41,740 [ scc.config] DEBUG Found submodule.scripts.url
2024-12-15 00:45:42,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-15 00:45:42,123 [ scc.config] DEBUG Found submodule.scripts.branch
2024-12-15 00:45:42,124 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-15 00:45:42,202 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff8b2e5e20> has local changes
2024-12-15 00:45:42,202 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Repository: ome/omero-cli-render
Excluded PRs:
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 102 will-moore 'Zarr export tests'
- PR 123 will-moore 'Support export of Fileset:ID'
Repository: ome/omero-figure
Excluded PRs:
- PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT)
- PR 600 Rdornier 'Label on rois' (user: Rdornier)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating d5050d8c..fb316a7e
Previously merged:
- PR 602 will-moore 'Changelog 7.2.0'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Repository: ome/omero-metadata
Already up to date.
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Repository: ome/omero-prometheus-tools
Excluded PRs:
- PR 15 jburel 'Build' (status: failure)
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
- PR 29 jburel 'Build'
Repository: ome/omero-signup
Updating c8610db..be76813
Previously merged:
- PR 21 jburel 'Build'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Repository: ome/omero-upload
Already up to date.
Repository: ome/omero-virtual-microscope
Already up to date.
Merged PRs:
- PR 20 jburel 'Build'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Merged PRs:
- PR 17 jburel 'Build'
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Repository: openmicroscopy/omero-webtest
Already up to date.
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#279 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/279/)'
2024-12-15 00:45:42,216 [ scc.git] DEBUG [detached HEAD 0ecf34d] merge master -Dorg -Ssuccess-only
2024-12-15 00:45:42,216 [ scc.merge] INFO Repository: ome/omero-plugins
2024-12-15 00:45:42,216 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2024-12-15 00:45:42,216 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,216 [ scc.merge] INFO
2024-12-15 00:45:42,216 [ scc.merge] INFO Merged PRs:
2024-12-15 00:45:42,216 [ scc.merge] INFO - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`'
2024-12-15 00:45:42,217 [ scc.merge] INFO
2024-12-15 00:45:42,217 [ scc.merge] INFO Repository: ome/minimal-omero-client
2024-12-15 00:45:42,217 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,217 [ scc.merge] INFO
2024-12-15 00:45:42,217 [ scc.merge] INFO
2024-12-15 00:45:42,217 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2024-12-15 00:45:42,217 [ scc.merge] INFO Excluded PRs:
2024-12-15 00:45:42,217 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2024-12-15 00:45:42,217 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,217 [ scc.merge] INFO
2024-12-15 00:45:42,217 [ scc.merge] INFO
2024-12-15 00:45:42,217 [ scc.merge] INFO Repository: ome/omero-cli-render
2024-12-15 00:45:42,217 [ scc.merge] INFO Excluded PRs:
2024-12-15 00:45:42,217 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2024-12-15 00:45:42,217 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,217 [ scc.merge] INFO
2024-12-15 00:45:42,217 [ scc.merge] INFO Merged PRs:
2024-12-15 00:45:42,217 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2024-12-15 00:45:42,217 [ scc.merge] INFO
2024-12-15 00:45:42,217 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2024-12-15 00:45:42,217 [ scc.merge] INFO Excluded PRs:
2024-12-15 00:45:42,217 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-12-15 00:45:42,217 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,217 [ scc.merge] INFO
2024-12-15 00:45:42,217 [ scc.merge] INFO Merged PRs:
2024-12-15 00:45:42,217 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2024-12-15 00:45:42,217 [ scc.merge] INFO
2024-12-15 00:45:42,217 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-15 00:45:42,217 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests'
2024-12-15 00:45:42,217 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID'
2024-12-15 00:45:42,217 [ scc.merge] INFO
2024-12-15 00:45:42,217 [ scc.merge] INFO Repository: ome/omero-figure
2024-12-15 00:45:42,217 [ scc.merge] INFO Excluded PRs:
2024-12-15 00:45:42,217 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT)
2024-12-15 00:45:42,217 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier)
2024-12-15 00:45:42,217 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2024-12-15 00:45:42,217 [ scc.merge] INFO Updating d5050d8c..fb316a7e
2024-12-15 00:45:42,217 [ scc.merge] INFO Previously merged:
2024-12-15 00:45:42,217 [ scc.merge] INFO - PR 602 will-moore 'Changelog 7.2.0'
2024-12-15 00:45:42,217 [ scc.merge] INFO
2024-12-15 00:45:42,218 [ scc.merge] INFO
2024-12-15 00:45:42,218 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2024-12-15 00:45:42,218 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,218 [ scc.merge] INFO
2024-12-15 00:45:42,218 [ scc.merge] INFO Merged PRs:
2024-12-15 00:45:42,218 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2024-12-15 00:45:42,218 [ scc.merge] INFO
2024-12-15 00:45:42,218 [ scc.merge] INFO Repository: ome/omero-gallery
2024-12-15 00:45:42,218 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,218 [ scc.merge] INFO
2024-12-15 00:45:42,218 [ scc.merge] INFO Merged PRs:
2024-12-15 00:45:42,218 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2024-12-15 00:45:42,218 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2024-12-15 00:45:42,218 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2024-12-15 00:45:42,218 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2024-12-15 00:45:42,218 [ scc.merge] INFO
2024-12-15 00:45:42,218 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-15 00:45:42,218 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2024-12-15 00:45:42,218 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2024-12-15 00:45:42,218 [ scc.merge] INFO
2024-12-15 00:45:42,218 [ scc.merge] INFO Repository: ome/omero-iviewer
2024-12-15 00:45:42,218 [ scc.merge] INFO Excluded PRs:
2024-12-15 00:45:42,218 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2024-12-15 00:45:42,218 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2024-12-15 00:45:42,218 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2024-12-15 00:45:42,218 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,218 [ scc.merge] INFO
2024-12-15 00:45:42,218 [ scc.merge] INFO Merged PRs:
2024-12-15 00:45:42,218 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2024-12-15 00:45:42,218 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2024-12-15 00:45:42,218 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2024-12-15 00:45:42,218 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2024-12-15 00:45:42,218 [ scc.merge] INFO
2024-12-15 00:45:42,218 [ scc.merge] INFO Repository: ome/omero-mapr
2024-12-15 00:45:42,218 [ scc.merge] INFO Excluded PRs:
2024-12-15 00:45:42,218 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2024-12-15 00:45:42,218 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,218 [ scc.merge] INFO
2024-12-15 00:45:42,218 [ scc.merge] INFO Merged PRs:
2024-12-15 00:45:42,218 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2024-12-15 00:45:42,219 [ scc.merge] INFO
2024-12-15 00:45:42,219 [ scc.merge] INFO Repository: ome/omero-metadata
2024-12-15 00:45:42,219 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,219 [ scc.merge] INFO
2024-12-15 00:45:42,219 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-15 00:45:42,219 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-12-15 00:45:42,219 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-12-15 00:45:42,219 [ scc.merge] INFO
2024-12-15 00:45:42,219 [ scc.merge] INFO Repository: ome/omero-parade
2024-12-15 00:45:42,219 [ scc.merge] INFO Excluded PRs:
2024-12-15 00:45:42,219 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
2024-12-15 00:45:42,219 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2024-12-15 00:45:42,219 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2024-12-15 00:45:42,219 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2024-12-15 00:45:42,219 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,219 [ scc.merge] INFO
2024-12-15 00:45:42,219 [ scc.merge] INFO
2024-12-15 00:45:42,219 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2024-12-15 00:45:42,219 [ scc.merge] INFO Excluded PRs:
2024-12-15 00:45:42,219 [ scc.merge] INFO - PR 15 jburel 'Build' (status: failure)
2024-12-15 00:45:42,219 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,219 [ scc.merge] INFO
2024-12-15 00:45:42,219 [ scc.merge] INFO Merged PRs:
2024-12-15 00:45:42,219 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel'
2024-12-15 00:45:42,219 [ scc.merge] INFO
2024-12-15 00:45:42,219 [ scc.merge] INFO Repository: ome/omero-rois
2024-12-15 00:45:42,219 [ scc.merge] INFO Excluded PRs:
2024-12-15 00:45:42,219 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-12-15 00:45:42,219 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,219 [ scc.merge] INFO
2024-12-15 00:45:42,219 [ scc.merge] INFO Merged PRs:
2024-12-15 00:45:42,219 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-12-15 00:45:42,219 [ scc.merge] INFO - PR 29 jburel 'Build'
2024-12-15 00:45:42,219 [ scc.merge] INFO
2024-12-15 00:45:42,219 [ scc.merge] INFO Repository: ome/omero-signup
2024-12-15 00:45:42,219 [ scc.merge] INFO Updating c8610db..be76813
2024-12-15 00:45:42,219 [ scc.merge] INFO Previously merged:
2024-12-15 00:45:42,219 [ scc.merge] INFO - PR 21 jburel 'Build'
2024-12-15 00:45:42,219 [ scc.merge] INFO
2024-12-15 00:45:42,220 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-15 00:45:42,220 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2024-12-15 00:45:42,220 [ scc.merge] INFO
2024-12-15 00:45:42,220 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2024-12-15 00:45:42,220 [ scc.merge] INFO Excluded PRs:
2024-12-15 00:45:42,220 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles)
2024-12-15 00:45:42,220 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
2024-12-15 00:45:42,220 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
2024-12-15 00:45:42,220 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,220 [ scc.merge] INFO
2024-12-15 00:45:42,220 [ scc.merge] INFO Merged PRs:
2024-12-15 00:45:42,220 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-12-15 00:45:42,220 [ scc.merge] INFO
2024-12-15 00:45:42,220 [ scc.merge] INFO Repository: ome/omero-upload
2024-12-15 00:45:42,220 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,220 [ scc.merge] INFO
2024-12-15 00:45:42,220 [ scc.merge] INFO
2024-12-15 00:45:42,220 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2024-12-15 00:45:42,220 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,220 [ scc.merge] INFO
2024-12-15 00:45:42,220 [ scc.merge] INFO Merged PRs:
2024-12-15 00:45:42,220 [ scc.merge] INFO - PR 20 jburel 'Build'
2024-12-15 00:45:42,220 [ scc.merge] INFO
2024-12-15 00:45:42,220 [ scc.merge] INFO Repository: ome/omero-web-zarr
2024-12-15 00:45:42,220 [ scc.merge] INFO Excluded PRs:
2024-12-15 00:45:42,220 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure)
2024-12-15 00:45:42,220 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2024-12-15 00:45:42,220 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,220 [ scc.merge] INFO
2024-12-15 00:45:42,220 [ scc.merge] INFO Merged PRs:
2024-12-15 00:45:42,220 [ scc.merge] INFO - PR 17 jburel 'Build'
2024-12-15 00:45:42,220 [ scc.merge] INFO
2024-12-15 00:45:42,220 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-15 00:45:42,220 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-12-15 00:45:42,220 [ scc.merge] INFO
2024-12-15 00:45:42,220 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2024-12-15 00:45:42,220 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,220 [ scc.merge] INFO
2024-12-15 00:45:42,220 [ scc.merge] INFO
2024-12-15 00:45:42,220 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2024-12-15 00:45:42,220 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,221 [ scc.merge] INFO
2024-12-15 00:45:42,221 [ scc.merge] INFO
2024-12-15 00:45:42,221 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2024-12-15 00:45:42,221 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,221 [ scc.merge] INFO
2024-12-15 00:45:42,221 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-15 00:45:42,221 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2024-12-15 00:45:42,221 [ scc.merge] INFO
2024-12-15 00:45:42,221 [ scc.merge] INFO Repository: ome/scripts
2024-12-15 00:45:42,221 [ scc.merge] INFO Excluded PRs:
2024-12-15 00:45:42,221 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-12-15 00:45:42,221 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-12-15 00:45:42,221 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-12-15 00:45:42,221 [ scc.merge] INFO Already up to date.
2024-12-15 00:45:42,221 [ scc.merge] INFO
2024-12-15 00:45:42,221 [ scc.merge] INFO Merged PRs:
2024-12-15 00:45:42,221 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-12-15 00:45:42,221 [ scc.merge] INFO
2024-12-15 00:45:42,221 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-15 00:45:42,221 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-12-15 00:45:42,221 [ scc.merge] INFO
2024-12-15 00:45:42,221 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-12-15 00:45:42,221 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,226 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-12-15 00:45:42,226 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,231 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,231 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-12-15 00:45:42,231 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-12-15 00:45:42,236 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,241 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-12-15 00:45:42,241 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-12-15 00:45:42,245 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-12-15 00:45:42,250 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-12-15 00:45:42,255 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-12-15 00:45:42,259 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-12-15 00:45:42,265 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-12-15 00:45:42,270 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-12-15 00:45:42,275 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-12-15 00:45:42,280 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,286 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-12-15 00:45:42,286 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-12-15 00:45:42,291 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-12-15 00:45:42,296 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-12-15 00:45:42,301 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-12-15 00:45:42,306 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-12-15 00:45:42,311 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,316 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,316 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-12-15 00:45:42,316 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-12-15 00:45:42,321 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,325 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,325 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-12-15 00:45:42,326 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,330 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-15 00:45:42,330 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-12-15 00:45:42,330 [ scc.git] DEBUG Calling 'git remote'
2024-12-15 00:45:42,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
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WARNING: The wheel package is not available.
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/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
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WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.1-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 5eb9e06] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 4777ef8
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from ce6e13c
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 11d3587
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from d5050d8c
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from 3b6c05a
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Entering 'omero-gallery'
HEAD detached from 2a621da
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Entering 'omero-iviewer'
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Entering 'omero-mapr'
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Entering 'omero-metadata'
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Entering 'omero-parade'
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Entering 'omero-prometheus-tools'
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Entering 'omero-rois'
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Entering 'omero-signup'
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Entering 'omero-test-infra'
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Entering 'omero-upload'
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Entering 'omero-virtual-microscope'
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Entering 'omero-web-zarr'
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Entering 'omero-weberror'
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Entering 'omero-webtest'
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Entering 'rOMERO-gateway'
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Entering 'scripts'
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[detached HEAD a12c176] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-12-15 00:46:28,478 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-12-15 00:46:37,280 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-12-15 00:46:39,581 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-12-15 00:46:44,031 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-12-15 00:47:23,647 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS
![[Jenkins]](/jenkins/static/f5fa13f0/images/svgs/logo.svg){kind=logo}
