![[Jenkins]](/jenkins/static/9161e9ff/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 622 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 550 [Pipeline] sh > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.4 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.1-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-46.0.1-cp311-abi3-manylinux_2_34_x86_64.whl (4.6 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.8.3-py3-none-any.whl (161 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.23-py3-none-any.whl (118 kB) Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.2 certifi-2025.8.3 cffi-2.0.0 charset_normalizer-3.4.3 cryptography-46.0.1 future-1.0.0 idna-3.10 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-09-18 00:36:44,773 [ scc.config] DEBUG Found github.token 2025-09-18 00:36:44,774 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-09-18 00:36:44,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:36:45,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:36:45,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-09-18 00:36:45,744 [ scc.gh] DEBUG 4035 remaining from 5000 (Reset at 00:09 2025-09-18 00:36:45,745 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:36:45,747 [ scc.git] DEBUG Check current status 2025-09-18 00:36:45,747 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:36:45,749 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-09-18 00:36:45,749 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:36:45,796 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-09-18 00:36:45,799 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-09-18 00:36:45,802 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-09-18 00:36:45,805 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-09-18 00:36:45,809 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-09-18 00:36:45,812 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-09-18 00:36:45,815 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-09-18 00:36:45,818 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-09-18 00:36:45,821 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-09-18 00:36:45,824 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-09-18 00:36:45,827 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-09-18 00:36:45,829 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-09-18 00:36:45,833 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-09-18 00:36:45,836 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-09-18 00:36:45,839 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-09-18 00:36:45,841 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-09-18 00:36:45,844 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-09-18 00:36:45,846 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-09-18 00:36:45,849 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-09-18 00:36:45,852 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-09-18 00:36:45,854 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-09-18 00:36:45,858 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-09-18 00:36:45,861 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:36:46,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-09-18 00:36:46,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:36:47,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:36:47,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:36:48,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:36:48,063 [ scc.git] DEBUG Resetting... 2025-09-18 00:36:48,063 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-09-18 00:36:48,070 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-09-18 00:36:48,070 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-09-18 00:36:48,166 [ scc.git] DEBUG Check current status 2025-09-18 00:36:48,166 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:36:48,168 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-09-18 00:36:48,168 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:36:48,212 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-09-18 00:36:48,215 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-09-18 00:36:48,218 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-09-18 00:36:48,221 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-09-18 00:36:48,225 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-09-18 00:36:48,228 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-09-18 00:36:48,231 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-09-18 00:36:48,234 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-09-18 00:36:48,237 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-09-18 00:36:48,240 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-09-18 00:36:48,242 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-09-18 00:36:48,245 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-09-18 00:36:48,248 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-09-18 00:36:48,251 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-09-18 00:36:48,254 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-09-18 00:36:48,257 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-09-18 00:36:48,259 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-09-18 00:36:48,262 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-09-18 00:36:48,264 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-09-18 00:36:48,267 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-09-18 00:36:48,269 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-09-18 00:36:48,273 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-09-18 00:36:48,274 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-09-18 00:36:48,274 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-09-18 00:36:48,274 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-09-18 00:36:48,274 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-09-18 00:36:48,274 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-09-18 00:36:48,274 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:36:48,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-09-18 00:36:49,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-09-18 00:36:49,082 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:36:49,082 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-09-18 00:36:49,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-09-18 00:36:49,568 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:36:49,568 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-09-18 00:36:50,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-09-18 00:36:50,082 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:36:50,082 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-09-18 00:36:50,082 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:36:50,083 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:36:50,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:36:50,085 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:36:50,087 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:36:50,087 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:36:50,090 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:36:50,093 [ scc.git] DEBUG Already up to date. 2025-09-18 00:36:50,093 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-09-18 00:36:50,381 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-09-18 00:36:50,381 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-09-18 00:36:50,387 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-09-18 00:36:50,699 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-09-18 00:36:50,699 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-09-18 00:36:50,706 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-09-18 00:36:50,986 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-09-18 00:36:50,986 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-09-18 00:36:50,992 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:36:50,992 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:36:50,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:36:50,994 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-09-18 00:36:50,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:36:50,999 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-09-18 00:36:51,012 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:36:51,014 [ scc.git] DEBUG scripts | 2 +- 2025-09-18 00:36:51,014 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-18 00:36:51,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:36:51,163 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-09-18 00:36:51,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:36:51,169 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-09-18 00:36:51,182 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:36:51,185 [ scc.git] DEBUG omero-figure | 2 +- 2025-09-18 00:36:51,185 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-18 00:36:51,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:36:51,559 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-09-18 00:36:51,562 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:36:51,564 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-09-18 00:36:51,577 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:36:51,580 [ scc.git] DEBUG omero-iviewer | 2 +- 2025-09-18 00:36:51,580 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-18 00:36:51,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:36:51,954 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:36:52,015 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-09-18 00:36:52,039 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-09-18 00:36:52,054 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-09-18 00:36:52,054 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:36:52,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:36:52,057 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:36:52,132 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f224e49c3d0> has no local changes 2025-09-18 00:36:52,132 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:36:52,204 [ scc.git] DEBUG [detached HEAD 9d7e38a] merge master -Dorg -Snone 2025-09-18 00:36:52,204 [ scc.merge] INFO Repository: ome/omero-plugins 2025-09-18 00:36:52,204 [ scc.merge] INFO Already up to date. 2025-09-18 00:36:52,204 [ scc.merge] INFO 2025-09-18 00:36:52,204 [ scc.merge] INFO Merged PRs: 2025-09-18 00:36:52,204 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-09-18 00:36:52,204 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-09-18 00:36:52,204 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-09-18 00:36:52,205 [ scc.merge] INFO 2025-09-18 00:36:52,205 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-09-18 00:36:52,205 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' From https://github.com/ome/omero-cli-zarr f7eea7c..37ea700 master -> origin/master * [new tag] v0.7.0rc1 -> v0.7.0rc1 Submodule path 'omero-cli-zarr': checked out '37ea7000309b4f8b87c5122c138fb59b17ecf86b' Submodule path 'omero-figure': checked out '66607c99ef10bf7997fe30f3813c6f90c401783a' Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '00e02072dc29b04eba14c080ca8a0175a1499c15' Submodule path 'scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2025-09-18 00:36:59,557 [ scc.config] DEBUG Found github.token 2025-09-18 00:36:59,558 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-09-18 00:36:59,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:37:00,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:37:00,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-09-18 00:37:00,598 [ scc.gh] DEBUG 4021 remaining from 5000 (Reset at 00:09 2025-09-18 00:37:00,599 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:00,601 [ scc.git] DEBUG Check current status 2025-09-18 00:37:00,601 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:00,604 [ scc.git] DEBUG 9d7e38a merge master -Dorg -Snone 2025-09-18 00:37:00,604 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:00,650 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-09-18 00:37:00,652 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-09-18 00:37:00,656 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-09-18 00:37:00,659 [ scc.git] DEBUG +37ea7000309b4f8b87c5122c138fb59b17ecf86b omero-cli-zarr (v0.7.0rc1-2-g37ea700) 2025-09-18 00:37:00,665 [ scc.git] DEBUG +66607c99ef10bf7997fe30f3813c6f90c401783a omero-figure (v7.2.1-82-g66607c99) 2025-09-18 00:37:00,668 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-09-18 00:37:00,671 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-09-18 00:37:00,674 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8) 2025-09-18 00:37:00,677 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-09-18 00:37:00,680 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2025-09-18 00:37:00,683 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-09-18 00:37:00,686 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-09-18 00:37:00,689 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-09-18 00:37:00,692 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-09-18 00:37:00,695 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-09-18 00:37:00,698 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-09-18 00:37:00,701 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2025-09-18 00:37:00,704 [ scc.git] DEBUG +00e02072dc29b04eba14c080ca8a0175a1499c15 omero-web-zarr (v0.1.1-10-g00e0207) 2025-09-18 00:37:00,706 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-09-18 00:37:00,709 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-09-18 00:37:00,712 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-09-18 00:37:00,716 [ scc.git] DEBUG +03b9116196e1a799dd18a666559613d912be01a5 scripts (v5.9.1-3-g03b9116) 2025-09-18 00:37:00,718 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:00,718 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-09-18 00:37:00,720 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2025-09-18 00:37:01,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-09-18 00:37:01,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:02,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:02,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:02,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:02,941 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:03,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-09-18 00:37:03,013 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:03,015 [ scc.git] DEBUG Check current status 2025-09-18 00:37:03,015 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:03,018 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2025-09-18 00:37:03,018 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:03,056 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:03,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2025-09-18 00:37:03,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:04,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:04,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:05,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:05,176 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:05,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:05,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-09-18 00:37:05,215 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:05,217 [ scc.git] DEBUG Check current status 2025-09-18 00:37:05,217 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:05,219 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2025-09-18 00:37:05,219 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:05,257 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:05,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2025-09-18 00:37:06,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:06,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:07,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:07,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:07,488 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:07,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:07,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-09-18 00:37:07,525 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:07,527 [ scc.git] DEBUG Check current status 2025-09-18 00:37:07,527 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:07,529 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2025-09-18 00:37:07,529 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:07,566 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:08,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2025-09-18 00:37:08,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:09,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:09,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:10,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:10,212 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:10,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:10,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-09-18 00:37:10,249 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:10,251 [ scc.git] DEBUG Check current status 2025-09-18 00:37:10,251 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:10,253 [ scc.git] DEBUG 37ea700 Bump version: 0.7.0rc1 → 0.7.1.dev0 2025-09-18 00:37:10,253 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:10,291 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:10,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2025-09-18 00:37:11,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:11,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:12,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:12,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:12,442 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:12,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:12,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-09-18 00:37:12,479 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:12,481 [ scc.git] DEBUG Check current status 2025-09-18 00:37:12,481 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:12,484 [ scc.git] DEBUG 66607c99 Merge pull request #605 from MinaEnayat/calib_bar 2025-09-18 00:37:12,484 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:12,522 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:12,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2025-09-18 00:37:13,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:13,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:14,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:14,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:14,653 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:14,689 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:14,689 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-09-18 00:37:14,689 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:14,691 [ scc.git] DEBUG Check current status 2025-09-18 00:37:14,691 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:14,694 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2025-09-18 00:37:14,694 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:14,731 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:15,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2025-09-18 00:37:15,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:16,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:16,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:16,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:16,975 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:17,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:17,012 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-09-18 00:37:17,012 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:17,014 [ scc.git] DEBUG Check current status 2025-09-18 00:37:17,014 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:17,016 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2025-09-18 00:37:17,016 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:17,052 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:17,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2025-09-18 00:37:17,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:18,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:18,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:19,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:19,310 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:19,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:19,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-09-18 00:37:19,346 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:19,348 [ scc.git] DEBUG Check current status 2025-09-18 00:37:19,348 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:19,350 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action 2025-09-18 00:37:19,351 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:19,387 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:19,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2025-09-18 00:37:20,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:20,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:21,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:21,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:21,533 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:21,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:21,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-09-18 00:37:21,569 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:21,571 [ scc.git] DEBUG Check current status 2025-09-18 00:37:21,571 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:21,573 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2025-09-18 00:37:21,573 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:21,609 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:22,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2025-09-18 00:37:22,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:22,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:23,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:23,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:23,786 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:23,823 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:23,824 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-09-18 00:37:23,824 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:23,826 [ scc.git] DEBUG Check current status 2025-09-18 00:37:23,826 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:23,828 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-09-18 00:37:23,828 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:23,865 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:24,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2025-09-18 00:37:24,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:25,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:25,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:26,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:26,046 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:26,082 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:26,083 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-09-18 00:37:26,083 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:26,085 [ scc.git] DEBUG Check current status 2025-09-18 00:37:26,085 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:26,087 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2025-09-18 00:37:26,087 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:26,122 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:26,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2025-09-18 00:37:27,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:27,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:27,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:28,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:28,314 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:28,351 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:28,352 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-09-18 00:37:28,352 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:28,354 [ scc.git] DEBUG Check current status 2025-09-18 00:37:28,354 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:28,356 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2025-09-18 00:37:28,356 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:28,392 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:28,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2025-09-18 00:37:29,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:29,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:30,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:30,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:30,513 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:30,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:30,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-09-18 00:37:30,549 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:30,551 [ scc.git] DEBUG Check current status 2025-09-18 00:37:30,551 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:30,553 [ scc.git] DEBUG bdfeb5e bump sphinx version 2025-09-18 00:37:30,554 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:30,589 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:31,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2025-09-18 00:37:31,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:31,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:32,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:32,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:32,885 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:32,922 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:32,922 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-09-18 00:37:32,922 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:32,924 [ scc.git] DEBUG Check current status 2025-09-18 00:37:32,924 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:32,926 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2025-09-18 00:37:32,927 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:32,963 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:33,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2025-09-18 00:37:33,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:34,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:34,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:35,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:35,182 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:35,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:35,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-09-18 00:37:35,219 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:35,221 [ scc.git] DEBUG Check current status 2025-09-18 00:37:35,221 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:35,223 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2025-09-18 00:37:35,223 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:35,259 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:35,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-09-18 00:37:35,613 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-09-18 00:37:35,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2025-09-18 00:37:36,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:36,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:37,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:37,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:37,664 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:37,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:37,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-09-18 00:37:37,702 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:37,704 [ scc.git] DEBUG Check current status 2025-09-18 00:37:37,704 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:37,706 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2025-09-18 00:37:37,707 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:37,743 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:38,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2025-09-18 00:37:38,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:39,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:39,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:39,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:39,890 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:39,926 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:39,926 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-09-18 00:37:39,926 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:39,928 [ scc.git] DEBUG Check current status 2025-09-18 00:37:39,928 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:39,930 [ scc.git] DEBUG 160d894 Fix display of code 2025-09-18 00:37:39,931 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:39,967 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:40,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2025-09-18 00:37:40,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:41,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:41,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:42,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:42,164 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:42,201 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:42,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-09-18 00:37:42,202 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:42,204 [ scc.git] DEBUG Check current status 2025-09-18 00:37:42,204 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:42,206 [ scc.git] DEBUG 00e0207 Merge pull request #20 from will-moore/zarr_python_v3 2025-09-18 00:37:42,206 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:42,242 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:42,242 [ scc.git] DEBUG Repository configuration: base-branch: main 2025-09-18 00:37:42,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2025-09-18 00:37:43,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:43,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:44,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:44,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:44,486 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:44,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:44,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-09-18 00:37:44,523 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:44,525 [ scc.git] DEBUG Check current status 2025-09-18 00:37:44,525 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:44,527 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2025-09-18 00:37:44,527 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:44,563 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:44,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-09-18 00:37:44,962 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-09-18 00:37:45,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2025-09-18 00:37:45,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:46,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:46,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:46,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:46,953 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:46,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:46,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-09-18 00:37:46,990 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:46,992 [ scc.git] DEBUG Check current status 2025-09-18 00:37:46,992 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:46,994 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2025-09-18 00:37:46,994 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:47,032 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:47,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-09-18 00:37:47,372 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-09-18 00:37:47,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2025-09-18 00:37:48,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:48,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:48,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:49,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:49,295 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:49,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:49,332 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-09-18 00:37:49,332 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:49,334 [ scc.git] DEBUG Check current status 2025-09-18 00:37:49,334 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:49,336 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-09-18 00:37:49,336 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:49,372 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:49,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2025-09-18 00:37:50,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:50,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:51,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:51,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:51,685 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:51,720 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:51,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-09-18 00:37:51,721 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-18 00:37:51,723 [ scc.git] DEBUG Check current status 2025-09-18 00:37:51,723 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:51,725 [ scc.git] DEBUG 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-09-18 00:37:51,726 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:51,763 [ scc.config] DEBUG Found remote.origin.url 2025-09-18 00:37:51,763 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-09-18 00:37:52,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-09-18 00:37:52,104 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-09-18 00:37:52,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2025-09-18 00:37:52,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-18 00:37:53,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-18 00:37:53,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-18 00:37:54,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-18 00:37:54,089 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:37:54,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:37:54,126 [ scc.git] DEBUG Resetting... 2025-09-18 00:37:54,126 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-09-18 00:37:54,132 [ scc.git] DEBUG HEAD is now at 9d7e38a merge master -Dorg -Snone 2025-09-18 00:37:54,132 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-09-18 00:37:54,188 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2025-09-18 00:37:54,208 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-09-18 00:37:54,227 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-09-18 00:37:54,241 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-09-18 00:37:54,267 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2025-09-18 00:37:54,277 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-09-18 00:37:54,300 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-09-18 00:37:54,302 [ scc.git] DEBUG Check current status 2025-09-18 00:37:54,302 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-18 00:37:54,304 [ scc.git] DEBUG 9d7e38a merge master -Dorg -Snone 2025-09-18 00:37:54,305 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-18 00:37:54,346 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-09-18 00:37:54,349 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-09-18 00:37:54,352 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-09-18 00:37:54,355 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-09-18 00:37:54,359 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2025-09-18 00:37:54,361 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-09-18 00:37:54,364 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-09-18 00:37:54,367 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2025-09-18 00:37:54,370 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-09-18 00:37:54,373 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-09-18 00:37:54,375 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-09-18 00:37:54,378 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-09-18 00:37:54,381 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-09-18 00:37:54,384 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-09-18 00:37:54,387 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-09-18 00:37:54,389 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-09-18 00:37:54,392 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-09-18 00:37:54,394 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-09-18 00:37:54,397 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-09-18 00:37:54,400 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-09-18 00:37:54,402 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-09-18 00:37:54,406 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-09-18 00:37:54,407 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-09-18 00:37:54,407 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-09-18 00:37:54,407 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-09-18 00:37:54,407 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-09-18 00:37:54,407 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-09-18 00:37:54,407 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-09-18 00:37:54,407 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:37:54,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-09-18 00:37:55,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-09-18 00:37:55,114 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:37:55,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-09-18 00:37:56,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:37:56,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-09-18 00:37:57,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:37:57,117 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-09-18 00:37:57,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-09-18 00:37:57,608 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:37:58,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-09-18 00:37:58,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:37:59,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-09-18 00:37:59,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:37:59,612 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-09-18 00:38:00,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-09-18 00:38:00,095 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:38:00,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-09-18 00:38:01,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:38:01,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-09-18 00:38:02,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:38:02,060 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-09-18 00:38:02,060 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:38:02,060 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:38:02,060 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:02,062 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:38:02,064 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:38:02,064 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:38:02,067 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:38:02,069 [ scc.git] DEBUG Already up to date. 2025-09-18 00:38:02,070 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-09-18 00:38:02,360 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-09-18 00:38:02,360 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-09-18 00:38:02,366 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-09-18 00:38:02,639 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-09-18 00:38:02,639 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-09-18 00:38:02,645 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-09-18 00:38:02,935 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-09-18 00:38:02,935 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-09-18 00:38:02,941 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:38:02,941 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:38:02,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:02,943 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-09-18 00:38:02,946 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:02,948 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-09-18 00:38:02,950 [ scc.git] DEBUG Already up to date. 2025-09-18 00:38:03,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:38:03,131 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-09-18 00:38:03,133 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:03,135 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-09-18 00:38:03,138 [ scc.git] DEBUG Already up to date. 2025-09-18 00:38:03,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:38:03,531 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-09-18 00:38:03,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:03,536 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-09-18 00:38:03,538 [ scc.git] DEBUG Already up to date. 2025-09-18 00:38:03,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:38:03,916 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:38:03,963 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:38:03,963 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:03,965 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:38:04,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2025-09-18 00:38:04,448 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:38:04,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-09-18 00:38:04,448 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:38:04,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:04,451 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:38:04,453 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:38:04,453 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:38:04,455 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:38:04,458 [ scc.git] DEBUG Already up to date. 2025-09-18 00:38:04,458 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:38:04,458 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:38:04,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:04,460 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:38:04,496 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:38:04,496 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:04,498 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:38:04,533 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:38:04,536 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141db3d450> has no local changes 2025-09-18 00:38:04,536 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:38:04,542 [ scc.git] DEBUG [detached HEAD 11d7ff1] merge master -Dorg -Ssuccess-only 2025-09-18 00:38:04,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:38:04,543 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:38:04,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2025-09-18 00:38:05,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2025-09-18 00:38:05,444 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:38:06,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2025-09-18 00:38:06,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:38:06,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:38:07,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2025-09-18 00:38:07,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:38:07,973 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:38:08,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2025-09-18 00:38:08,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2025-09-18 00:38:08,957 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:38:08,957 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-09-18 00:38:08,957 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:38:08,957 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:08,959 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:38:08,961 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:38:08,961 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:38:08,964 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:38:08,966 [ scc.git] DEBUG Already up to date. 2025-09-18 00:38:08,966 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2025-09-18 00:38:09,276 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2025-09-18 00:38:09,276 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2025-09-18 00:38:09,281 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:38:09,281 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:38:09,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:09,283 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2025-09-18 00:38:09,285 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:09,287 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2025-09-18 00:38:09,294 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:38:09,296 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-18 00:38:09,296 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-18 00:38:09,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:38:09,443 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:38:09,480 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:38:09,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:09,482 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:38:09,517 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:38:09,520 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141e091f10> has no local changes 2025-09-18 00:38:09,520 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:38:09,526 [ scc.git] DEBUG [detached HEAD ae635b6] merge master -Dorg -Ssuccess-only 2025-09-18 00:38:09,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:38:09,526 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:38:09,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2025-09-18 00:38:10,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/73 HTTP/1.1" 200 None 2025-09-18 00:38:10,485 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:38:11,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None 2025-09-18 00:38:11,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:38:12,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:38:12,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None 2025-09-18 00:38:13,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/d230161123b7bbfcb9363e02bbe289367c532cdc?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:38:13,101 [ scc.repo] DEBUG - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:38:13,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None 2025-09-18 00:38:14,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-09-18 00:38:14,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:38:15,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-09-18 00:38:15,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:38:15,526 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names' 2025-09-18 00:38:15,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None 2025-09-18 00:38:16,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None 2025-09-18 00:38:16,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-09-18 00:38:17,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:38:17,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:38:18,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-09-18 00:38:18,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:38:18,800 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands' 2025-09-18 00:38:19,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2025-09-18 00:38:19,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2025-09-18 00:38:20,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-09-18 00:38:20,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:38:21,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:38:21,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-09-18 00:38:22,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:38:22,274 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2025-09-18 00:38:22,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2025-09-18 00:38:23,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2025-09-18 00:38:23,198 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:38:23,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-09-18 00:38:23,198 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:38:23,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:23,200 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:38:23,202 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:38:23,202 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:38:23,205 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:38:23,208 [ scc.git] DEBUG Already up to date. 2025-09-18 00:38:23,208 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2025-09-18 00:38:23,495 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-09-18 00:38:23,495 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2025-09-18 00:38:23,499 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-09-18 00:38:23,776 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-09-18 00:38:23,776 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-09-18 00:38:23,780 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head' 2025-09-18 00:38:24,068 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-09-18 00:38:24,069 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD 2025-09-18 00:38:24,073 [ scc.git] DEBUG Calling 'git fetch origin pull/73/head' 2025-09-18 00:38:24,350 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-09-18 00:38:24,350 [ scc.git] DEBUG * branch refs/pull/73/head -> FETCH_HEAD 2025-09-18 00:38:24,354 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:38:24,354 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:38:24,354 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:24,356 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2025-09-18 00:38:24,359 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:24,361 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2025-09-18 00:38:24,369 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:38:24,371 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2025-09-18 00:38:24,371 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2025-09-18 00:38:24,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:38:24,533 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-09-18 00:38:24,536 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:24,538 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-09-18 00:38:24,546 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-09-18 00:38:24,547 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:38:24,549 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++-------- 2025-09-18 00:38:24,549 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-) 2025-09-18 00:38:24,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:38:24,921 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-09-18 00:38:24,924 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:24,926 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-09-18 00:38:24,934 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-09-18 00:38:24,935 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:38:24,938 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++------- 2025-09-18 00:38:24,938 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-) 2025-09-18 00:38:25,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:38:25,324 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d230161123b7bbfcb9363e02bbe289367c532cdc' 2025-09-18 00:38:25,328 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:25,330 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 73 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) d230161123b7bbfcb9363e02bbe289367c532cdc' 2025-09-18 00:38:25,337 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:38:25,339 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-18 00:38:25,339 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-18 00:38:25,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:38:25,830 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:38:25,865 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:38:25,865 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:25,867 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:38:25,901 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:38:25,904 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1420504150> has no local changes 2025-09-18 00:38:25,904 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:38:25,910 [ scc.git] DEBUG [detached HEAD bd2c6da] merge master -Dorg -Ssuccess-only 2025-09-18 00:38:25,910 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:38:25,910 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:38:26,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2025-09-18 00:38:26,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2025-09-18 00:38:27,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2025-09-18 00:38:28,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-09-18 00:38:28,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:38:29,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:38:29,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-09-18 00:38:30,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None 2025-09-18 00:38:30,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-09-18 00:38:31,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None 2025-09-18 00:38:31,167 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-09-18 00:38:31,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2025-09-18 00:38:32,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2025-09-18 00:38:32,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2025-09-18 00:38:33,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2025-09-18 00:38:33,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2025-09-18 00:38:33,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None 2025-09-18 00:38:34,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2025-09-18 00:38:34,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2025-09-18 00:38:35,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2025-09-18 00:38:35,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2025-09-18 00:38:36,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2025-09-18 00:38:36,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2025-09-18 00:38:37,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2025-09-18 00:38:37,425 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:38:37,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-09-18 00:38:37,426 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:38:37,426 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:37,428 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:38:37,430 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:38:37,431 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:38:37,434 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:38:37,447 [ scc.git] DEBUG Updating 11d3587..37ea700 2025-09-18 00:38:38,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2025-09-18 00:38:38,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2025-09-18 00:38:39,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2025-09-18 00:38:40,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2025-09-18 00:38:40,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2025-09-18 00:38:41,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2025-09-18 00:38:42,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2025-09-18 00:38:42,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2025-09-18 00:38:42,944 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2025-09-18 00:38:43,231 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-09-18 00:38:43,231 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2025-09-18 00:38:43,236 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:38:43,236 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:38:43,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:43,238 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-09-18 00:38:43,241 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:43,244 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-09-18 00:38:43,252 [ scc.git] DEBUG Auto-merging CHANGELOG.md 2025-09-18 00:38:43,252 [ scc.git] DEBUG CONFLICT (content): Merge conflict in CHANGELOG.md 2025-09-18 00:38:43,252 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-18 00:38:43,253 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-18 00:38:43,255 [ scc.git] DEBUG Calling 'git reset --hard 37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-09-18 00:38:43,259 [ scc.git] DEBUG HEAD is now at 37ea700 Bump version: 0.7.0rc1 → 0.7.1.dev0 2025-09-18 00:38:43,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:38:43,412 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-09-18 00:38:43,415 [ scc.git] DEBUG Calling 'git diff --name-only f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-09-18 00:38:43,418 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#535](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/consoleText) for more details. Possible conflicts: - Upstream changes - CHANGELOG.md --conflicts 2025-09-18 00:38:43,420 [ scc.config] DEBUG Found github.token 2025-09-18 00:38:43,420 [ scc.git] DEBUG Adding comment to issue #178. 2025-09-18 00:38:44,333 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 201 1985 2025-09-18 00:38:44,334 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:38:44,369 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:38:44,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:38:44,371 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:38:44,406 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:38:44,409 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141de79950> has no local changes 2025-09-18 00:38:44,409 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 174 will-moore 'Skip wells' (stage: draft) - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:38:44,415 [ scc.git] DEBUG [detached HEAD 258f149] merge master -Dorg -Ssuccess-only 2025-09-18 00:38:44,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:38:44,415 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:38:44,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2025-09-18 00:38:45,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/642 HTTP/1.1" 200 None 2025-09-18 00:38:45,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/642/comments HTTP/1.1" 200 None 2025-09-18 00:38:45,905 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:38:46,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1fe8ad313b090f3c1e95577a9e7a7248ea605fea HTTP/1.1" 200 None 2025-09-18 00:38:46,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1fe8ad313b090f3c1e95577a9e7a7248ea605fea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:38:47,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1fe8ad313b090f3c1e95577a9e7a7248ea605fea/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:38:48,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1fe8ad313b090f3c1e95577a9e7a7248ea605fea HTTP/1.1" 200 None 2025-09-18 00:38:48,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/1fe8ad313b090f3c1e95577a9e7a7248ea605fea?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:38:48,570 [ scc.repo] DEBUG - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6' 2025-09-18 00:38:49,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2025-09-18 00:38:49,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2025-09-18 00:38:50,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None 2025-09-18 00:38:50,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None 2025-09-18 00:38:50,483 [ scc.repo] DEBUG # ... Include label: include 2025-09-18 00:38:51,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ac58011fe3386095f2e637d128d293d573474a0c HTTP/1.1" 200 None 2025-09-18 00:38:51,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ac58011fe3386095f2e637d128d293d573474a0c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:38:51,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ac58011fe3386095f2e637d128d293d573474a0c HTTP/1.1" 200 None 2025-09-18 00:38:52,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ac58011fe3386095f2e637d128d293d573474a0c?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:38:52,423 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position' 2025-09-18 00:38:52,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630 HTTP/1.1" 200 None 2025-09-18 00:38:53,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630/comments HTTP/1.1" 200 None 2025-09-18 00:38:53,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None 2025-09-18 00:38:54,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:38:54,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:38:55,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None 2025-09-18 00:38:55,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/7a71d8f456b659444095e496a4c6d2449c306a29?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:38:55,797 [ scc.repo] DEBUG - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-09-18 00:38:56,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None 2025-09-18 00:38:56,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616 HTTP/1.1" 200 None 2025-09-18 00:38:57,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616/comments HTTP/1.1" 200 None 2025-09-18 00:38:57,260 [ scc.repo] DEBUG # ... Include label: include 2025-09-18 00:38:57,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4df87c2fb29b4cb28b030665a560ab13b0ce1fce HTTP/1.1" 200 None 2025-09-18 00:38:58,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4df87c2fb29b4cb28b030665a560ab13b0ce1fce/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:38:58,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4df87c2fb29b4cb28b030665a560ab13b0ce1fce HTTP/1.1" 200 None 2025-09-18 00:38:59,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/4df87c2fb29b4cb28b030665a560ab13b0ce1fce?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:38:59,179 [ scc.repo] DEBUG - PR 616 Rdornier 'Fix labels around border' 2025-09-18 00:38:59,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612 HTTP/1.1" 200 None 2025-09-18 00:39:00,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612/comments HTTP/1.1" 200 None 2025-09-18 00:39:00,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None 2025-09-18 00:39:01,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:39:01,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:39:02,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None 2025-09-18 00:39:02,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/9ae98a37ea474db7d473b99abb884cd4b1fdfb36?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:39:02,531 [ scc.repo] DEBUG - PR 612 will-moore 'Script version' 2025-09-18 00:39:03,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610 HTTP/1.1" 200 None 2025-09-18 00:39:03,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610/comments HTTP/1.1" 200 None 2025-09-18 00:39:03,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-09-18 00:39:04,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:39:04,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:39:05,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-09-18 00:39:05,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/59ca9bf79effaded86845d8c49fb94bda6727333?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:39:05,852 [ scc.repo] DEBUG - PR 610 will-moore 'Add docs/contributing.rst' 2025-09-18 00:39:06,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2025-09-18 00:39:06,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2025-09-18 00:39:06,919 [ scc.repo] DEBUG # ... Include label: include 2025-09-18 00:39:07,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4812684abd05bfc06c483a555d27f272740c9389 HTTP/1.1" 200 None 2025-09-18 00:39:07,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4812684abd05bfc06c483a555d27f272740c9389/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:39:08,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4812684abd05bfc06c483a555d27f272740c9389 HTTP/1.1" 200 None 2025-09-18 00:39:08,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/4812684abd05bfc06c483a555d27f272740c9389?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:39:08,777 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois' 2025-09-18 00:39:08,777 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:39:08,777 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-09-18 00:39:08,778 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:39:08,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:08,780 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:39:08,783 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:39:08,783 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:39:08,786 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:39:08,805 [ scc.git] DEBUG Updating 9cc36cde..66607c99 2025-09-18 00:39:09,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2025-09-18 00:39:10,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2025-09-18 00:39:11,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2025-09-18 00:39:11,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2025-09-18 00:39:12,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2025-09-18 00:39:13,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2025-09-18 00:39:13,108 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head' 2025-09-18 00:39:13,724 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-18 00:39:13,724 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD 2025-09-18 00:39:13,727 [ scc.git] DEBUG Calling 'git fetch origin pull/610/head' 2025-09-18 00:39:14,014 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-18 00:39:14,014 [ scc.git] DEBUG * branch refs/pull/610/head -> FETCH_HEAD 2025-09-18 00:39:14,018 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-09-18 00:39:14,299 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-18 00:39:14,299 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-09-18 00:39:14,303 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-09-18 00:39:14,618 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-18 00:39:14,618 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-09-18 00:39:14,623 [ scc.git] DEBUG Calling 'git fetch origin pull/630/head' 2025-09-18 00:39:14,981 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-18 00:39:14,981 [ scc.git] DEBUG * branch refs/pull/630/head -> FETCH_HEAD 2025-09-18 00:39:14,986 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head' 2025-09-18 00:39:15,272 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-18 00:39:15,272 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD 2025-09-18 00:39:15,277 [ scc.git] DEBUG Calling 'git fetch origin pull/642/head' 2025-09-18 00:39:15,630 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-09-18 00:39:15,630 [ scc.git] DEBUG * branch refs/pull/642/head -> FETCH_HEAD 2025-09-18 00:39:15,635 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:39:15,635 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:39:15,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:15,637 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4812684abd05bfc06c483a555d27f272740c9389' 2025-09-18 00:39:15,644 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:15,646 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 4812684abd05bfc06c483a555d27f272740c9389' 2025-09-18 00:39:15,664 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:39:15,674 [ scc.git] DEBUG .gitignore | 2 + 2025-09-18 00:39:15,674 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 274 +++++++- 2025-09-18 00:39:15,674 [ scc.git] DEBUG src/css/figure.css | 18 +- 2025-09-18 00:39:15,674 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes 2025-09-18 00:39:15,674 [ scc.git] DEBUG src/index.html | 34 +- 2025-09-18 00:39:15,674 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +- 2025-09-18 00:39:15,674 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +- 2025-09-18 00:39:15,674 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 208 +++++- 2025-09-18 00:39:15,674 [ scc.git] DEBUG src/js/shape_editor/line.js | 215 +++++- 2025-09-18 00:39:15,674 [ scc.git] DEBUG src/js/shape_editor/point.js | 203 +++++- 2025-09-18 00:39:15,674 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 207 +++++- 2025-09-18 00:39:15,675 [ scc.git] DEBUG src/js/shape_editor/rect.js | 212 +++++- 2025-09-18 00:39:15,675 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 419 +++++++++++- 2025-09-18 00:39:15,675 [ scc.git] DEBUG src/js/shape_editor/text.js | 760 +++++++++++++++++++++ 2025-09-18 00:39:15,675 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2025-09-18 00:39:15,676 [ scc.git] DEBUG src/js/views/right_panel_view.js | 121 +++- 2025-09-18 00:39:15,676 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +- 2025-09-18 00:39:15,676 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 186 ++++- 2025-09-18 00:39:15,676 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +- 2025-09-18 00:39:15,676 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +- 2025-09-18 00:39:15,676 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++ 2025-09-18 00:39:15,676 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 +++++++---- 2025-09-18 00:39:15,676 [ scc.git] DEBUG 22 files changed, 3266 insertions(+), 224 deletions(-) 2025-09-18 00:39:15,676 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png 2025-09-18 00:39:15,676 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js 2025-09-18 00:39:15,676 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html 2025-09-18 00:39:15,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:39:15,822 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59ca9bf79effaded86845d8c49fb94bda6727333' 2025-09-18 00:39:15,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:15,830 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 59ca9bf79effaded86845d8c49fb94bda6727333' 2025-09-18 00:39:15,847 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:39:15,850 [ scc.git] DEBUG .github/PULL_REQUEST_TEMPLATE.md | 5 +++ 2025-09-18 00:39:15,850 [ scc.git] DEBUG README.rst | 4 +- 2025-09-18 00:39:15,850 [ scc.git] DEBUG docs/contributing.md | 89 ++++++++++++++++++++++++++++++++++++++++ 2025-09-18 00:39:15,850 [ scc.git] DEBUG 3 files changed, 97 insertions(+), 1 deletion(-) 2025-09-18 00:39:15,850 [ scc.git] DEBUG create mode 100644 .github/PULL_REQUEST_TEMPLATE.md 2025-09-18 00:39:15,850 [ scc.git] DEBUG create mode 100644 docs/contributing.md 2025-09-18 00:39:16,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:39:16,213 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9ae98a37ea474db7d473b99abb884cd4b1fdfb36' 2025-09-18 00:39:16,219 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:16,221 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Script version) 9ae98a37ea474db7d473b99abb884cd4b1fdfb36' 2025-09-18 00:39:16,249 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-09-18 00:39:16,249 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-18 00:39:16,249 [ scc.git] DEBUG Auto-merging package.json 2025-09-18 00:39:16,249 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-09-18 00:39:16,249 [ scc.git] DEBUG Auto-merging src/index.html 2025-09-18 00:39:16,250 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:39:16,256 [ scc.git] DEBUG .bumpversion.cfg | 2 + 2025-09-18 00:39:16,256 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 7 +- 2025-09-18 00:39:16,256 [ scc.git] DEBUG omero_figure/urls.py | 3 + 2025-09-18 00:39:16,256 [ scc.git] DEBUG omero_figure/views.py | 54 ++++++++++++++ 2025-09-18 00:39:16,256 [ scc.git] DEBUG package-lock.json | 8 +- 2025-09-18 00:39:16,256 [ scc.git] DEBUG package.json | 3 +- 2025-09-18 00:39:16,256 [ scc.git] DEBUG src/css/figure.css | 2 +- 2025-09-18 00:39:16,256 [ scc.git] DEBUG src/html/dialogs/scriptManagerDialog.html | 86 ++++++++++++++++++++++ 2025-09-18 00:39:16,256 [ scc.git] DEBUG src/index.html | 20 +++-- 2025-09-18 00:39:16,256 [ scc.git] DEBUG src/js/views/figure_view.js | 54 ++++++++++++++ 2025-09-18 00:39:16,256 [ scc.git] DEBUG vite.config.js | 3 + 2025-09-18 00:39:16,256 [ scc.git] DEBUG 11 files changed, 230 insertions(+), 12 deletions(-) 2025-09-18 00:39:16,256 [ scc.git] DEBUG create mode 100644 src/html/dialogs/scriptManagerDialog.html 2025-09-18 00:39:16,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:39:16,601 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4df87c2fb29b4cb28b030665a560ab13b0ce1fce' 2025-09-18 00:39:16,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:16,609 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border) 4df87c2fb29b4cb28b030665a560ab13b0ce1fce' 2025-09-18 00:39:16,636 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-09-18 00:39:16,636 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2025-09-18 00:39:16,636 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2025-09-18 00:39:16,636 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-09-18 00:39:16,636 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:39:16,642 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 22 ++++++++++++++-------- 2025-09-18 00:39:16,642 [ scc.git] DEBUG src/js/models/panel_model.js | 16 ++++++++++++++++ 2025-09-18 00:39:16,642 [ scc.git] DEBUG src/js/views/figure_view.js | 4 +++- 2025-09-18 00:39:16,642 [ scc.git] DEBUG src/js/views/panel_view.js | 21 +++++++++------------ 2025-09-18 00:39:16,642 [ scc.git] DEBUG 4 files changed, 42 insertions(+), 21 deletions(-) 2025-09-18 00:39:16,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:39:16,994 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7a71d8f456b659444095e496a4c6d2449c306a29' 2025-09-18 00:39:17,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:17,003 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 630 (Fix color and position for ALL new panel insets) 7a71d8f456b659444095e496a4c6d2449c306a29' 2025-09-18 00:39:17,020 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2025-09-18 00:39:17,020 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/right_panel_view.js 2025-09-18 00:39:17,021 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-18 00:39:17,021 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-18 00:39:17,024 [ scc.git] DEBUG Calling 'git reset --hard 50c4c926a383d54da0905d399141e5dfda0effa6' 2025-09-18 00:39:17,029 [ scc.git] DEBUG HEAD is now at 50c4c926 merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border) 2025-09-18 00:39:17,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:39:17,391 [ scc.git] DEBUG Calling 'git merge-base 66607c99ef10bf7997fe30f3813c6f90c401783a 7a71d8f456b659444095e496a4c6d2449c306a29' 2025-09-18 00:39:17,396 [ scc.git] DEBUG Calling 'git diff --name-only 9cc36cde05bde4def7b62b07c2e9ae5f66712e96..66607c99ef10bf7997fe30f3813c6f90c401783a' 2025-09-18 00:39:17,399 [ scc.git] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' Conflicting PR. Removed from build [OMERO-plugins-push#535](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/js/views/right_panel_view.js - Upstream changes - src/js/views/right_panel_view.js --conflicts 2025-09-18 00:39:17,401 [ scc.config] DEBUG Found github.token 2025-09-18 00:39:17,401 [ scc.git] DEBUG Not adding comment to issue #630, already --conflicts. 2025-09-18 00:39:17,401 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ac58011fe3386095f2e637d128d293d573474a0c' 2025-09-18 00:39:17,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:17,410 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) ac58011fe3386095f2e637d128d293d573474a0c' 2025-09-18 00:39:17,434 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-09-18 00:39:17,434 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-09-18 00:39:17,434 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-09-18 00:39:17,434 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html 2025-09-18 00:39:17,434 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html 2025-09-18 00:39:17,434 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-18 00:39:17,435 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-18 00:39:17,439 [ scc.git] DEBUG Calling 'git reset --hard 50c4c926a383d54da0905d399141e5dfda0effa6' 2025-09-18 00:39:17,446 [ scc.git] DEBUG HEAD is now at 50c4c926 merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border) 2025-09-18 00:39:17,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:39:17,792 [ scc.git] DEBUG Calling 'git merge-base 66607c99ef10bf7997fe30f3813c6f90c401783a ac58011fe3386095f2e637d128d293d573474a0c' 2025-09-18 00:39:17,795 [ scc.git] DEBUG Calling 'git diff --name-only 66607c99ef10bf7997fe30f3813c6f90c401783a..66607c99ef10bf7997fe30f3813c6f90c401783a' 2025-09-18 00:39:17,798 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position' Conflicting PR. Removed from build [OMERO-plugins-push#535](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/templates/scalebar_form.template.html --conflicts 2025-09-18 00:39:17,800 [ scc.config] DEBUG Found github.token 2025-09-18 00:39:17,800 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts. 2025-09-18 00:39:17,800 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fe8ad313b090f3c1e95577a9e7a7248ea605fea' 2025-09-18 00:39:17,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:17,808 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 642 (Bump vite from 6.2.6 to 6.3.6) 1fe8ad313b090f3c1e95577a9e7a7248ea605fea' 2025-09-18 00:39:17,824 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-18 00:39:17,824 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-09-18 00:39:17,824 [ scc.git] DEBUG Auto-merging package.json 2025-09-18 00:39:17,825 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-18 00:39:17,825 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-18 00:39:17,829 [ scc.git] DEBUG Calling 'git reset --hard 50c4c926a383d54da0905d399141e5dfda0effa6' 2025-09-18 00:39:17,836 [ scc.git] DEBUG HEAD is now at 50c4c926 merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border) 2025-09-18 00:39:18,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:39:18,192 [ scc.git] DEBUG Calling 'git merge-base 66607c99ef10bf7997fe30f3813c6f90c401783a 1fe8ad313b090f3c1e95577a9e7a7248ea605fea' 2025-09-18 00:39:18,197 [ scc.git] DEBUG Calling 'git diff --name-only d2c6f5bc061df1e02422728732b07ae7a929ccb2..66607c99ef10bf7997fe30f3813c6f90c401783a' 2025-09-18 00:39:18,200 [ scc.git] INFO - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6' Conflicting PR. Removed from build [OMERO-plugins-push#535](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/consoleText) for more details. Possible conflicts: - PR #612 will-moore 'Script version' - package-lock.json --conflicts 2025-09-18 00:39:18,202 [ scc.config] DEBUG Found github.token 2025-09-18 00:39:18,202 [ scc.git] DEBUG Not adding comment to issue #642, already --conflicts. 2025-09-18 00:39:18,202 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:39:18,238 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:39:18,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:18,240 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:39:18,274 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:39:18,280 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141db2ef50> has no local changes 2025-09-18 00:39:18,280 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..66607c99 Previously merged: - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 610 will-moore 'Add docs/contributing.rst' - PR 612 will-moore 'Script version' - PR 616 Rdornier 'Fix labels around border' Conflicting PRs (not included): - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 637 Rdornier 'Fix scalebar position' - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:39:18,286 [ scc.git] DEBUG [detached HEAD 60af55db] merge master -Dorg -Ssuccess-only 2025-09-18 00:39:18,286 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:39:18,287 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:39:18,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2025-09-18 00:39:19,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2025-09-18 00:39:19,226 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:39:19,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2025-09-18 00:39:20,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:39:20,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:39:21,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2025-09-18 00:39:21,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:39:21,668 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:39:22,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2025-09-18 00:39:22,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2025-09-18 00:39:23,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-09-18 00:39:23,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:39:24,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-09-18 00:39:24,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:39:24,453 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2025-09-18 00:39:24,453 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:39:24,453 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-09-18 00:39:24,453 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:39:24,453 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:24,456 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:39:24,458 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:39:24,458 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:39:24,460 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:39:24,463 [ scc.git] DEBUG Already up to date. 2025-09-18 00:39:24,463 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2025-09-18 00:39:24,744 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-09-18 00:39:24,744 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2025-09-18 00:39:24,749 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2025-09-18 00:39:25,033 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-09-18 00:39:25,033 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2025-09-18 00:39:25,038 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:39:25,038 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:39:25,038 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:25,040 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-09-18 00:39:25,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:25,045 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-09-18 00:39:25,052 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2025-09-18 00:39:25,052 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:39:25,055 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2025-09-18 00:39:25,055 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-09-18 00:39:25,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:39:25,262 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2025-09-18 00:39:25,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:25,267 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2025-09-18 00:39:25,274 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:39:25,276 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-18 00:39:25,276 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-18 00:39:25,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:39:25,653 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:39:25,688 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:39:25,689 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:25,691 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:39:25,725 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:39:25,728 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141dbefad0> has no local changes 2025-09-18 00:39:25,728 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:39:25,733 [ scc.git] DEBUG [detached HEAD a23abfe] merge master -Dorg -Ssuccess-only 2025-09-18 00:39:25,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:39:25,733 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:39:26,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2025-09-18 00:39:26,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2025-09-18 00:39:27,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2025-09-18 00:39:27,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2025-09-18 00:39:27,649 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:39:28,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-09-18 00:39:28,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:39:29,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:39:29,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-09-18 00:39:30,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:39:30,385 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-09-18 00:39:30,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2025-09-18 00:39:31,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2025-09-18 00:39:31,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2025-09-18 00:39:31,801 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:39:32,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-09-18 00:39:32,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:39:33,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:39:33,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-09-18 00:39:34,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:39:34,383 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-09-18 00:39:34,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2025-09-18 00:39:34,849 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:39:35,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-09-18 00:39:35,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:39:36,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:39:36,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-09-18 00:39:37,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:39:37,372 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-09-18 00:39:37,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2025-09-18 00:39:37,863 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:39:38,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-09-18 00:39:38,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:39:39,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:39:40,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-09-18 00:39:40,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:39:40,490 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-09-18 00:39:40,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2025-09-18 00:39:41,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2025-09-18 00:39:41,414 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:39:41,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-09-18 00:39:42,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:39:43,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:39:43,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-09-18 00:39:44,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:39:44,170 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-09-18 00:39:44,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2025-09-18 00:39:44,650 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:39:45,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-09-18 00:39:45,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:39:46,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:39:46,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-09-18 00:39:47,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:39:47,110 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-09-18 00:39:47,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2025-09-18 00:39:47,573 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:39:48,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-09-18 00:39:48,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:39:49,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:39:49,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-09-18 00:39:50,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:39:50,217 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-09-18 00:39:50,218 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:39:50,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-09-18 00:39:50,218 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:39:50,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:50,221 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:39:50,223 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:39:50,223 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:39:50,225 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:39:50,228 [ scc.git] DEBUG Already up to date. 2025-09-18 00:39:50,228 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2025-09-18 00:39:50,514 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-18 00:39:50,514 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2025-09-18 00:39:50,518 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2025-09-18 00:39:50,804 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-18 00:39:50,804 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2025-09-18 00:39:50,808 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2025-09-18 00:39:51,087 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-18 00:39:51,087 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2025-09-18 00:39:51,092 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2025-09-18 00:39:51,378 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-18 00:39:51,378 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2025-09-18 00:39:51,382 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2025-09-18 00:39:51,656 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-18 00:39:51,656 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2025-09-18 00:39:51,660 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2025-09-18 00:39:51,953 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-18 00:39:51,953 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2025-09-18 00:39:51,957 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2025-09-18 00:39:52,230 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-09-18 00:39:52,230 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2025-09-18 00:39:52,233 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:39:52,233 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:39:52,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:52,236 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-09-18 00:39:52,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:52,240 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-09-18 00:39:52,248 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:39:52,253 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2025-09-18 00:39:52,253 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2025-09-18 00:39:52,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:39:52,452 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-09-18 00:39:52,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:52,457 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-09-18 00:39:52,472 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-18 00:39:52,473 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:39:52,478 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2025-09-18 00:39:52,478 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2025-09-18 00:39:52,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:39:52,882 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-09-18 00:39:52,884 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:52,886 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-09-18 00:39:52,901 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-18 00:39:52,901 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-09-18 00:39:52,901 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-18 00:39:52,902 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-18 00:39:52,904 [ scc.git] DEBUG Calling 'git reset --hard c287cfd4c3ea04def6207b1e53b97f351c7baed1' 2025-09-18 00:39:52,908 [ scc.git] DEBUG HEAD is now at c287cfd merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2025-09-18 00:39:53,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:39:53,307 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-09-18 00:39:53,309 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-09-18 00:39:53,311 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#535](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2025-09-18 00:39:53,313 [ scc.config] DEBUG Found github.token 2025-09-18 00:39:53,313 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2025-09-18 00:39:53,313 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-09-18 00:39:53,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:53,318 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-09-18 00:39:53,333 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-18 00:39:53,333 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:39:53,338 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2025-09-18 00:39:53,338 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2025-09-18 00:39:53,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:39:53,700 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-09-18 00:39:53,703 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:53,705 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-09-18 00:39:53,720 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-18 00:39:53,721 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:39:53,725 [ scc.git] DEBUG package-lock.json | 6 +++--- 2025-09-18 00:39:53,725 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2025-09-18 00:39:54,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:39:54,085 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-09-18 00:39:54,088 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:54,090 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-09-18 00:39:54,104 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-18 00:39:54,104 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-09-18 00:39:54,104 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-18 00:39:54,104 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-18 00:39:54,107 [ scc.git] DEBUG Calling 'git reset --hard b0e911fb456c5299242ddc9136f5c1f582402ccd' 2025-09-18 00:39:54,111 [ scc.git] DEBUG HEAD is now at b0e911f merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-09-18 00:39:54,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:39:54,480 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-09-18 00:39:54,483 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-09-18 00:39:54,485 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#535](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2025-09-18 00:39:54,487 [ scc.config] DEBUG Found github.token 2025-09-18 00:39:54,487 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2025-09-18 00:39:54,487 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-09-18 00:39:54,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:54,491 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-09-18 00:39:54,509 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-18 00:39:54,509 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-09-18 00:39:54,509 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-18 00:39:54,509 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-18 00:39:54,512 [ scc.git] DEBUG Calling 'git reset --hard b0e911fb456c5299242ddc9136f5c1f582402ccd' 2025-09-18 00:39:54,516 [ scc.git] DEBUG HEAD is now at b0e911f merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-09-18 00:39:54,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:39:54,884 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-09-18 00:39:54,886 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-09-18 00:39:54,889 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#535](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2025-09-18 00:39:54,891 [ scc.config] DEBUG Found github.token 2025-09-18 00:39:54,891 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2025-09-18 00:39:54,891 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:39:54,928 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:39:54,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:39:54,930 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:39:54,967 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:39:54,971 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141dbbbfd0> has no local changes 2025-09-18 00:39:54,971 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:39:54,978 [ scc.git] DEBUG [detached HEAD 345863f] merge master -Dorg -Ssuccess-only 2025-09-18 00:39:54,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:39:54,978 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:39:55,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2025-09-18 00:39:56,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2025-09-18 00:39:56,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2025-09-18 00:39:56,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2025-09-18 00:39:57,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2025-09-18 00:39:57,454 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:39:58,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-09-18 00:39:58,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:39:59,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:39:59,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-09-18 00:40:00,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:40:00,064 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-09-18 00:40:00,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2025-09-18 00:40:00,562 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:40:01,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-09-18 00:40:01,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:40:02,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:40:02,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-09-18 00:40:03,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:40:03,234 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-09-18 00:40:03,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2025-09-18 00:40:04,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2025-09-18 00:40:04,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2025-09-18 00:40:05,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2025-09-18 00:40:05,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-09-18 00:40:06,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:40:06,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-09-18 00:40:06,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:40:06,974 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2025-09-18 00:40:07,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2025-09-18 00:40:07,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2025-09-18 00:40:08,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-09-18 00:40:08,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:40:09,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-09-18 00:40:09,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:40:09,853 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2025-09-18 00:40:10,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2025-09-18 00:40:10,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2025-09-18 00:40:11,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-09-18 00:40:11,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:40:12,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-09-18 00:40:12,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:40:12,689 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2025-09-18 00:40:13,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2025-09-18 00:40:13,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2025-09-18 00:40:14,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2025-09-18 00:40:14,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:40:15,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:40:15,144 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:40:15,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-09-18 00:40:15,144 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:40:15,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:15,146 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:40:15,149 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:40:15,149 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:40:15,151 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:40:15,158 [ scc.git] DEBUG Updating 7a798ce..bb94cf8 2025-09-18 00:40:15,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2025-09-18 00:40:15,824 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2025-09-18 00:40:16,130 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-09-18 00:40:16,130 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2025-09-18 00:40:16,134 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2025-09-18 00:40:16,414 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-09-18 00:40:16,414 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2025-09-18 00:40:16,418 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2025-09-18 00:40:16,704 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-09-18 00:40:16,704 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2025-09-18 00:40:16,707 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2025-09-18 00:40:16,988 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-09-18 00:40:16,988 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2025-09-18 00:40:16,992 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2025-09-18 00:40:17,276 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-09-18 00:40:17,276 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2025-09-18 00:40:17,280 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:40:17,280 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:40:17,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:17,283 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-09-18 00:40:17,287 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:17,289 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-09-18 00:40:17,301 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2025-09-18 00:40:17,301 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2025-09-18 00:40:17,302 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:40:17,305 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2025-09-18 00:40:17,305 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2025-09-18 00:40:17,305 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2025-09-18 00:40:17,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:40:17,458 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2025-09-18 00:40:17,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:17,465 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2025-09-18 00:40:17,482 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2025-09-18 00:40:17,482 [ scc.git] DEBUG Auto-merging src/app/context.js 2025-09-18 00:40:17,482 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2025-09-18 00:40:17,482 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2025-09-18 00:40:17,483 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:40:17,487 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2025-09-18 00:40:17,487 [ scc.git] DEBUG src/app/context.js | 6 +- 2025-09-18 00:40:17,487 [ scc.git] DEBUG src/app/header.html | 5 + 2025-09-18 00:40:17,487 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2025-09-18 00:40:17,487 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2025-09-18 00:40:17,487 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2025-09-18 00:40:17,487 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2025-09-18 00:40:17,487 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2025-09-18 00:40:17,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:40:17,851 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2025-09-18 00:40:17,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:17,858 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2025-09-18 00:40:17,869 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2025-09-18 00:40:17,870 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:40:17,873 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2025-09-18 00:40:17,873 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2025-09-18 00:40:17,873 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2025-09-18 00:40:18,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:40:18,240 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-09-18 00:40:18,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:18,247 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-09-18 00:40:18,261 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:40:18,271 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2025-09-18 00:40:18,271 [ scc.git] DEBUG package.json | 2 +- 2025-09-18 00:40:18,271 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2025-09-18 00:40:18,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:40:18,623 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-09-18 00:40:18,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:18,630 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-09-18 00:40:18,666 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-18 00:40:18,666 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-09-18 00:40:18,666 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-18 00:40:18,667 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-18 00:40:18,669 [ scc.git] DEBUG Calling 'git reset --hard 7d07b09783a8350d661ef03c91b6e3eb107421ec' 2025-09-18 00:40:18,676 [ scc.git] DEBUG HEAD is now at 7d07b09 merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2025-09-18 00:40:19,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:40:19,028 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-09-18 00:40:19,030 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4' 2025-09-18 00:40:19,033 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#535](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2025-09-18 00:40:19,035 [ scc.config] DEBUG Found github.token 2025-09-18 00:40:19,035 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2025-09-18 00:40:19,035 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:40:19,073 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:40:19,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:19,075 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:40:19,109 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:40:19,116 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141dbbad50> has no local changes 2025-09-18 00:40:19,116 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:40:19,122 [ scc.git] DEBUG [detached HEAD f7c94d6] merge master -Dorg -Ssuccess-only 2025-09-18 00:40:19,123 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:40:19,123 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:40:19,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2025-09-18 00:40:20,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2025-09-18 00:40:20,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2025-09-18 00:40:20,506 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:40:21,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2025-09-18 00:40:21,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:40:22,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:40:22,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2025-09-18 00:40:23,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:40:23,072 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:40:23,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2025-09-18 00:40:24,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-09-18 00:40:24,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:40:25,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-09-18 00:40:25,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:40:25,512 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-18 00:40:25,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2025-09-18 00:40:26,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2025-09-18 00:40:27,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-09-18 00:40:27,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:40:27,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-09-18 00:40:28,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:40:28,369 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2025-09-18 00:40:28,370 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:40:28,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-09-18 00:40:28,370 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:40:28,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:28,372 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:40:28,375 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:40:28,375 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:40:28,377 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:40:28,380 [ scc.git] DEBUG Already up to date. 2025-09-18 00:40:28,380 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2025-09-18 00:40:28,668 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-09-18 00:40:28,668 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2025-09-18 00:40:28,672 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2025-09-18 00:40:28,947 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-09-18 00:40:28,947 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2025-09-18 00:40:28,951 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2025-09-18 00:40:29,239 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-09-18 00:40:29,239 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2025-09-18 00:40:29,243 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:40:29,243 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:40:29,243 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:29,245 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-09-18 00:40:29,249 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:29,251 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-09-18 00:40:29,258 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:40:29,261 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2025-09-18 00:40:29,261 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2025-09-18 00:40:29,261 [ scc.git] DEBUG requirements.txt | 2 +- 2025-09-18 00:40:29,261 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2025-09-18 00:40:29,261 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2025-09-18 00:40:29,261 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2025-09-18 00:40:29,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:40:29,405 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-09-18 00:40:29,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:29,410 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-09-18 00:40:29,417 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:40:29,420 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-18 00:40:29,420 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-18 00:40:29,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:40:29,809 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-09-18 00:40:29,812 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:29,814 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-09-18 00:40:29,821 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2025-09-18 00:40:29,821 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2025-09-18 00:40:29,822 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-18 00:40:29,822 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-18 00:40:29,824 [ scc.git] DEBUG Calling 'git reset --hard 03a79dbb1dc89cd361568cc1a826ffd87471eb44' 2025-09-18 00:40:29,828 [ scc.git] DEBUG HEAD is now at 03a79db merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2025-09-18 00:40:30,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:40:30,216 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-09-18 00:40:30,218 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2025-09-18 00:40:30,220 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#535](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2025-09-18 00:40:30,222 [ scc.config] DEBUG Found github.token 2025-09-18 00:40:30,222 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2025-09-18 00:40:30,222 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:40:30,258 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:40:30,258 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:30,260 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:40:30,294 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:40:30,297 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141db19e10> has no local changes 2025-09-18 00:40:30,298 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:40:30,303 [ scc.git] DEBUG [detached HEAD 0ad3ee1] merge master -Dorg -Ssuccess-only 2025-09-18 00:40:30,303 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:40:30,303 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:40:30,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2025-09-18 00:40:31,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2025-09-18 00:40:31,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2025-09-18 00:40:32,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-09-18 00:40:32,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:40:33,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-09-18 00:40:33,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:40:33,678 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-09-18 00:40:34,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2025-09-18 00:40:34,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2025-09-18 00:40:35,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-09-18 00:40:35,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:40:36,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-09-18 00:40:36,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:40:36,465 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-09-18 00:40:36,465 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:40:36,465 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-09-18 00:40:36,465 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:40:36,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:36,468 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:40:36,470 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:40:36,470 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:40:36,472 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:40:36,479 [ scc.git] DEBUG Updating 3cd120c..55060a2 2025-09-18 00:40:37,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2025-09-18 00:40:37,209 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2025-09-18 00:40:37,514 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-09-18 00:40:37,514 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2025-09-18 00:40:37,519 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2025-09-18 00:40:37,803 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-09-18 00:40:37,803 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2025-09-18 00:40:37,807 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:40:37,807 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:40:37,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:37,809 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-09-18 00:40:37,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:37,815 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-09-18 00:40:37,826 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2025-09-18 00:40:37,826 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2025-09-18 00:40:37,826 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-09-18 00:40:37,826 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-09-18 00:40:37,827 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-18 00:40:37,827 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-18 00:40:37,829 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-09-18 00:40:37,833 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-09-18 00:40:38,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:40:38,064 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-09-18 00:40:38,067 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2025-09-18 00:40:38,070 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#535](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2025-09-18 00:40:38,072 [ scc.config] DEBUG Found github.token 2025-09-18 00:40:38,072 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2025-09-18 00:40:38,072 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2025-09-18 00:40:38,076 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:38,078 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2025-09-18 00:40:38,091 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-09-18 00:40:38,091 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-09-18 00:40:38,091 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2025-09-18 00:40:38,091 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-18 00:40:38,091 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-18 00:40:38,094 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-09-18 00:40:38,098 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-09-18 00:40:38,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:40:38,456 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2025-09-18 00:40:38,460 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2025-09-18 00:40:38,463 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#535](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2025-09-18 00:40:38,465 [ scc.config] DEBUG Found github.token 2025-09-18 00:40:38,465 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2025-09-18 00:40:38,465 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:40:38,500 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:40:38,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:38,502 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:40:38,536 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:40:38,539 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141db49350> has no local changes 2025-09-18 00:40:38,539 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:40:38,545 [ scc.git] DEBUG [detached HEAD f8eb57f] merge master -Dorg -Ssuccess-only 2025-09-18 00:40:38,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:40:38,546 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:40:39,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2025-09-18 00:40:39,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2025-09-18 00:40:40,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-09-18 00:40:40,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:40:41,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:40:41,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-09-18 00:40:42,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:40:42,007 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-18 00:40:42,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2025-09-18 00:40:42,466 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:40:43,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-09-18 00:40:43,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:40:44,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:40:44,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-09-18 00:40:45,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:40:45,055 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-09-18 00:40:45,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2025-09-18 00:40:45,515 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:40:46,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-09-18 00:40:46,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:40:47,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:40:47,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-09-18 00:40:48,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:40:48,106 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-09-18 00:40:48,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2025-09-18 00:40:49,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2025-09-18 00:40:49,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2025-09-18 00:40:50,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2025-09-18 00:40:50,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2025-09-18 00:40:50,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2025-09-18 00:40:51,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2025-09-18 00:40:51,428 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:40:51,428 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-09-18 00:40:51,428 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:40:51,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:51,431 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:40:51,433 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:40:51,433 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:40:51,436 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:40:51,438 [ scc.git] DEBUG Already up to date. 2025-09-18 00:40:51,438 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2025-09-18 00:40:51,724 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-09-18 00:40:51,724 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2025-09-18 00:40:51,729 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2025-09-18 00:40:52,021 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-09-18 00:40:52,021 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2025-09-18 00:40:52,025 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2025-09-18 00:40:52,340 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-09-18 00:40:52,340 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2025-09-18 00:40:52,344 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:40:52,344 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:40:52,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:52,346 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2025-09-18 00:40:52,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:52,351 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2025-09-18 00:40:52,358 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:40:52,361 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2025-09-18 00:40:52,361 [ scc.git] DEBUG package.json | 2 +- 2025-09-18 00:40:52,361 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2025-09-18 00:40:52,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:40:52,495 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2025-09-18 00:40:52,498 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:52,500 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2025-09-18 00:40:52,508 [ scc.git] DEBUG Auto-merging package-lock.json 2025-09-18 00:40:52,508 [ scc.git] DEBUG Auto-merging package.json 2025-09-18 00:40:52,509 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:40:52,512 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2025-09-18 00:40:52,512 [ scc.git] DEBUG package.json | 2 +- 2025-09-18 00:40:52,512 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2025-09-18 00:40:52,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:40:52,897 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-09-18 00:40:52,900 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:52,902 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-09-18 00:40:52,909 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:40:52,911 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-18 00:40:52,911 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-18 00:40:53,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:40:53,284 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:40:53,321 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:40:53,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:53,323 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:40:53,357 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:40:53,360 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141c267f50> has no local changes 2025-09-18 00:40:53,361 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:40:53,366 [ scc.git] DEBUG [detached HEAD 60a050b] merge master -Dorg -Ssuccess-only 2025-09-18 00:40:53,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:40:53,366 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:40:53,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2025-09-18 00:40:54,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2025-09-18 00:40:54,324 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:40:54,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2025-09-18 00:40:55,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:40:55,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:40:56,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2025-09-18 00:40:57,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:40:57,103 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:40:57,103 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:40:57,103 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-09-18 00:40:57,103 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:40:57,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:57,105 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:40:57,108 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:40:57,108 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:40:57,110 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:40:57,113 [ scc.git] DEBUG Already up to date. 2025-09-18 00:40:57,113 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-09-18 00:40:57,404 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2025-09-18 00:40:57,404 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-09-18 00:40:57,408 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:40:57,408 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:40:57,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:57,410 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2025-09-18 00:40:57,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:57,414 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2025-09-18 00:40:57,420 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:40:57,423 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-18 00:40:57,423 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-18 00:40:57,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:40:57,565 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:40:57,601 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:40:57,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:40:57,603 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:40:57,638 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:40:57,641 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141dc08410> has no local changes 2025-09-18 00:40:57,641 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:40:57,646 [ scc.git] DEBUG [detached HEAD 64ba04d] merge master -Dorg -Ssuccess-only 2025-09-18 00:40:57,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:40:57,647 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:40:58,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2025-09-18 00:40:58,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2025-09-18 00:40:58,590 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:40:59,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-09-18 00:40:59,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:41:00,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:41:00,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-09-18 00:41:01,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2025-09-18 00:41:01,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-09-18 00:41:02,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2025-09-18 00:41:02,294 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:41:02,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2025-09-18 00:41:03,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2025-09-18 00:41:03,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-09-18 00:41:04,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:41:04,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:41:05,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-09-18 00:41:05,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2025-09-18 00:41:06,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-09-18 00:41:06,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2025-09-18 00:41:06,638 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2025-09-18 00:41:07,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2025-09-18 00:41:07,142 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:41:07,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-09-18 00:41:07,142 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:07,142 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:07,144 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:41:07,147 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:41:07,147 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:41:07,149 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:41:07,152 [ scc.git] DEBUG Already up to date. 2025-09-18 00:41:07,152 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2025-09-18 00:41:07,456 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-09-18 00:41:07,456 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2025-09-18 00:41:07,459 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2025-09-18 00:41:07,744 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-09-18 00:41:07,744 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2025-09-18 00:41:07,748 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:41:07,748 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:07,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:07,750 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2025-09-18 00:41:07,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:07,755 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2025-09-18 00:41:07,762 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:41:07,765 [ scc.git] DEBUG setup.py | 4 +- 2025-09-18 00:41:07,765 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2025-09-18 00:41:07,765 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2025-09-18 00:41:07,765 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2025-09-18 00:41:07,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:41:07,916 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2025-09-18 00:41:07,919 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:07,921 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2025-09-18 00:41:07,928 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:41:07,930 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-18 00:41:07,930 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-18 00:41:08,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:41:08,315 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:41:08,352 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:08,352 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:08,354 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:41:08,389 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:41:08,393 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141c250210> has no local changes 2025-09-18 00:41:08,393 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:41:08,398 [ scc.git] DEBUG [detached HEAD e796587] merge master -Dorg -Ssuccess-only 2025-09-18 00:41:08,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:41:08,399 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:41:08,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2025-09-18 00:41:09,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2025-09-18 00:41:09,369 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:41:10,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2025-09-18 00:41:10,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:41:11,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:41:11,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2025-09-18 00:41:12,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:41:12,245 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:41:12,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2025-09-18 00:41:13,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2025-09-18 00:41:13,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-09-18 00:41:14,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:41:14,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-09-18 00:41:15,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:41:15,142 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2025-09-18 00:41:15,142 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:41:15,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-09-18 00:41:15,143 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:15,143 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:15,145 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:41:15,148 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:41:15,148 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:41:15,150 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:41:15,153 [ scc.git] DEBUG Already up to date. 2025-09-18 00:41:15,153 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-09-18 00:41:15,455 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-09-18 00:41:15,455 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-09-18 00:41:15,459 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2025-09-18 00:41:15,737 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-09-18 00:41:15,737 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2025-09-18 00:41:15,741 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:41:15,741 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:15,741 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:15,743 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-09-18 00:41:15,747 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:15,748 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-09-18 00:41:15,756 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2025-09-18 00:41:15,756 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2025-09-18 00:41:15,756 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2025-09-18 00:41:15,756 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2025-09-18 00:41:15,756 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2025-09-18 00:41:15,756 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2025-09-18 00:41:15,756 [ scc.git] DEBUG Auto-merging setup.py 2025-09-18 00:41:15,756 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2025-09-18 00:41:15,756 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-18 00:41:15,756 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-18 00:41:15,759 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2025-09-18 00:41:15,762 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2025-09-18 00:41:15,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:41:15,910 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-09-18 00:41:15,913 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2025-09-18 00:41:15,915 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#535](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - setup.py - omero_signup/signup_settings.py - omero_signup/views.py --conflicts 2025-09-18 00:41:15,917 [ scc.config] DEBUG Found github.token 2025-09-18 00:41:15,917 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2025-09-18 00:41:15,917 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2025-09-18 00:41:15,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:15,922 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2025-09-18 00:41:15,929 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:41:15,931 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-18 00:41:15,931 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-18 00:41:16,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:41:16,330 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:41:16,366 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:16,366 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:16,368 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:41:16,402 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:41:16,405 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141c257690> has no local changes 2025-09-18 00:41:16,405 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:41:16,410 [ scc.git] DEBUG [detached HEAD 4cd33dd] merge master -Dorg -Ssuccess-only 2025-09-18 00:41:16,410 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:41:16,410 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:41:16,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2025-09-18 00:41:17,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None 2025-09-18 00:41:17,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-09-18 00:41:18,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:41:19,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:41:19,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-09-18 00:41:20,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:41:20,296 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps' 2025-09-18 00:41:20,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2025-09-18 00:41:21,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2025-09-18 00:41:21,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2025-09-18 00:41:22,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:41:22,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:41:23,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2025-09-18 00:41:23,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2025-09-18 00:41:24,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2025-09-18 00:41:24,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2025-09-18 00:41:25,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-09-18 00:41:25,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:41:26,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-09-18 00:41:26,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:41:26,605 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-09-18 00:41:26,605 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:41:26,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-09-18 00:41:26,605 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:26,606 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:26,608 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:41:26,610 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:41:26,610 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:41:26,613 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:41:26,615 [ scc.git] DEBUG Already up to date. 2025-09-18 00:41:26,615 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2025-09-18 00:41:26,913 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-09-18 00:41:26,913 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2025-09-18 00:41:26,917 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head' 2025-09-18 00:41:27,197 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-09-18 00:41:27,197 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD 2025-09-18 00:41:27,201 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:41:27,201 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:27,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:27,204 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2025-09-18 00:41:27,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:27,209 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2025-09-18 00:41:27,219 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:41:27,222 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2025-09-18 00:41:27,222 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2025-09-18 00:41:27,222 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2025-09-18 00:41:27,222 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2025-09-18 00:41:27,222 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2025-09-18 00:41:27,222 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2025-09-18 00:41:27,222 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2025-09-18 00:41:27,222 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2025-09-18 00:41:27,222 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2025-09-18 00:41:27,223 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2025-09-18 00:41:27,223 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2025-09-18 00:41:27,223 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2025-09-18 00:41:27,223 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2025-09-18 00:41:27,223 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2025-09-18 00:41:27,223 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2025-09-18 00:41:27,224 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2025-09-18 00:41:27,224 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2025-09-18 00:41:27,224 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2025-09-18 00:41:27,224 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2025-09-18 00:41:27,224 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2025-09-18 00:41:27,224 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2025-09-18 00:41:27,224 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2025-09-18 00:41:27,224 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2025-09-18 00:41:27,224 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2025-09-18 00:41:27,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:41:27,399 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-09-18 00:41:27,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:27,404 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-09-18 00:41:27,412 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:41:27,414 [ scc.git] DEBUG docker | 1 + 2025-09-18 00:41:27,415 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2025-09-18 00:41:27,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:41:27,807 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:41:27,843 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:27,843 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:27,845 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:41:27,880 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:41:27,883 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141c240dd0> has no local changes 2025-09-18 00:41:27,883 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:41:27,938 [ scc.git] DEBUG [detached HEAD ed41cd2] merge master -Dorg -Ssuccess-only 2025-09-18 00:41:27,939 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:41:27,939 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:41:28,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2025-09-18 00:41:28,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2025-09-18 00:41:28,852 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:41:29,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2025-09-18 00:41:30,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:41:30,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:41:31,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2025-09-18 00:41:31,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:41:31,530 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:41:31,530 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:41:31,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-09-18 00:41:31,530 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:31,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:31,532 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:41:31,534 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:41:31,534 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:41:31,537 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:41:31,539 [ scc.git] DEBUG Already up to date. 2025-09-18 00:41:31,540 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-09-18 00:41:31,830 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2025-09-18 00:41:31,830 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-09-18 00:41:31,834 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:41:31,834 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:31,834 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:31,836 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2025-09-18 00:41:31,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:31,841 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2025-09-18 00:41:31,847 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:41:31,849 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-18 00:41:31,849 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-18 00:41:31,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:41:31,987 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:41:32,023 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:32,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:32,025 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:41:32,060 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:41:32,062 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141c25b7d0> has no local changes 2025-09-18 00:41:32,062 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:41:32,067 [ scc.git] DEBUG [detached HEAD cdde9b0] merge master -Dorg -Ssuccess-only 2025-09-18 00:41:32,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:41:32,068 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:41:32,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2025-09-18 00:41:32,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2025-09-18 00:41:32,954 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:41:33,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2025-09-18 00:41:34,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:41:34,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:41:34,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2025-09-18 00:41:35,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:41:35,420 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:41:35,420 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:41:35,420 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-09-18 00:41:35,420 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:35,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:35,423 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:41:35,425 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:41:35,425 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:41:35,428 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:41:35,434 [ scc.git] DEBUG Updating deab817..160d894 2025-09-18 00:41:36,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2025-09-18 00:41:36,162 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2025-09-18 00:41:36,446 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2025-09-18 00:41:36,446 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2025-09-18 00:41:36,450 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:41:36,450 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:36,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:36,452 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2025-09-18 00:41:36,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:36,457 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2025-09-18 00:41:36,463 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:41:36,465 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-18 00:41:36,465 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-18 00:41:36,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:41:36,613 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:41:36,648 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:36,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:36,650 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:41:36,684 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:41:36,687 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141c21f790> has no local changes 2025-09-18 00:41:36,687 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:41:36,692 [ scc.git] DEBUG [detached HEAD a28127c] merge master -Dorg -Ssuccess-only 2025-09-18 00:41:36,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:41:36,693 [ scc.git] INFO Overriding base-branch from master to main 2025-09-18 00:41:36,693 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:41:37,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2025-09-18 00:41:37,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2025-09-18 00:41:38,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2025-09-18 00:41:38,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2025-09-18 00:41:39,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:41:39,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:41:40,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2025-09-18 00:41:40,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:41:40,556 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2025-09-18 00:41:41,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2025-09-18 00:41:41,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2025-09-18 00:41:42,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2025-09-18 00:41:42,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-09-18 00:41:43,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:41:43,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-09-18 00:41:43,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:41:43,974 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-09-18 00:41:43,975 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:41:43,975 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-09-18 00:41:43,975 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:43,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:43,977 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2025-09-18 00:41:43,979 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:41:43,979 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2025-09-18 00:41:43,982 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2025-09-18 00:41:43,988 [ scc.git] DEBUG Updating 8f3c313..00e0207 2025-09-18 00:41:44,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2025-09-18 00:41:44,624 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2025-09-18 00:41:44,919 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-09-18 00:41:44,919 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2025-09-18 00:41:44,923 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2025-09-18 00:41:45,202 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-09-18 00:41:45,202 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2025-09-18 00:41:45,206 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:41:45,206 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:45,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:45,208 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-09-18 00:41:45,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:45,213 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-09-18 00:41:45,220 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2025-09-18 00:41:45,220 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2025-09-18 00:41:45,220 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-09-18 00:41:45,220 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-18 00:41:45,221 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-18 00:41:45,223 [ scc.git] DEBUG Calling 'git reset --hard 00e02072dc29b04eba14c080ca8a0175a1499c15' 2025-09-18 00:41:45,226 [ scc.git] DEBUG HEAD is now at 00e0207 Merge pull request #20 from will-moore/zarr_python_v3 2025-09-18 00:41:45,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:41:45,381 [ scc.git] DEBUG Calling 'git merge-base 00e02072dc29b04eba14c080ca8a0175a1499c15 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-09-18 00:41:45,383 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..00e02072dc29b04eba14c080ca8a0175a1499c15' 2025-09-18 00:41:45,385 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#535](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2025-09-18 00:41:45,387 [ scc.config] DEBUG Found github.token 2025-09-18 00:41:45,388 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2025-09-18 00:41:45,388 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2025-09-18 00:41:45,390 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:45,392 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2025-09-18 00:41:45,399 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-09-18 00:41:45,400 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:41:45,403 [ scc.git] DEBUG README.rst | 3 + 2025-09-18 00:41:45,403 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2025-09-18 00:41:45,403 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2025-09-18 00:41:45,403 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2025-09-18 00:41:45,403 [ scc.git] DEBUG setup.py | 5 +- 2025-09-18 00:41:45,403 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2025-09-18 00:41:45,403 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2025-09-18 00:41:45,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:41:45,772 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:41:45,807 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:45,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:45,809 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:41:45,843 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:41:45,846 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141c26ad10> has no local changes 2025-09-18 00:41:45,846 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..00e0207 Previously merged: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:41:45,851 [ scc.git] DEBUG [detached HEAD b183dd5] merge master -Dorg -Ssuccess-only 2025-09-18 00:41:45,852 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:41:45,852 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:41:46,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2025-09-18 00:41:46,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2025-09-18 00:41:46,795 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:41:47,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2025-09-18 00:41:47,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:41:48,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:41:49,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2025-09-18 00:41:49,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:41:49,451 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:41:49,451 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:41:49,452 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-09-18 00:41:49,452 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:49,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:49,454 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:41:49,456 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:41:49,456 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:41:49,459 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:41:49,461 [ scc.git] DEBUG Already up to date. 2025-09-18 00:41:49,462 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2025-09-18 00:41:49,762 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2025-09-18 00:41:49,762 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2025-09-18 00:41:49,766 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:41:49,766 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:49,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:49,768 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2025-09-18 00:41:49,771 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:49,773 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2025-09-18 00:41:49,779 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:41:49,781 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-18 00:41:49,781 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-18 00:41:49,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:41:49,924 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:41:49,959 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:49,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:49,961 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:41:49,995 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:41:49,998 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141c2bd810> has no local changes 2025-09-18 00:41:49,998 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:41:50,003 [ scc.git] DEBUG [detached HEAD f2f6e75] merge master -Dorg -Ssuccess-only 2025-09-18 00:41:50,003 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:41:50,003 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:41:50,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2025-09-18 00:41:50,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2025-09-18 00:41:50,928 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-18 00:41:51,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2025-09-18 00:41:51,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:41:52,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:41:53,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2025-09-18 00:41:53,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:41:53,449 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:41:53,449 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:41:53,449 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-09-18 00:41:53,449 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:53,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:53,452 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:41:53,454 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:41:53,454 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:41:53,456 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:41:53,459 [ scc.git] DEBUG Already up to date. 2025-09-18 00:41:53,459 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2025-09-18 00:41:53,752 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2025-09-18 00:41:53,752 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2025-09-18 00:41:53,756 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:41:53,756 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:53,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:53,758 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2025-09-18 00:41:53,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:53,763 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2025-09-18 00:41:53,769 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:41:53,772 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-18 00:41:53,772 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-18 00:41:53,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:41:53,948 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:41:53,984 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:53,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:53,986 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:41:54,021 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:41:54,025 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141c2e3350> has no local changes 2025-09-18 00:41:54,025 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:41:54,030 [ scc.git] DEBUG [detached HEAD 24166bb] merge master -Dorg -Ssuccess-only 2025-09-18 00:41:54,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:41:54,030 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:41:54,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2025-09-18 00:41:54,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2025-09-18 00:41:55,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2025-09-18 00:41:55,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-09-18 00:41:56,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:41:56,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-09-18 00:41:57,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:41:57,333 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2025-09-18 00:41:57,333 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:41:57,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-09-18 00:41:57,333 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:57,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:57,336 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-18 00:41:57,338 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:41:57,338 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-18 00:41:57,340 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-18 00:41:57,343 [ scc.git] DEBUG Already up to date. 2025-09-18 00:41:57,343 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2025-09-18 00:41:57,620 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2025-09-18 00:41:57,620 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2025-09-18 00:41:57,624 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:41:57,625 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:57,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:57,627 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-09-18 00:41:57,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:57,631 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-09-18 00:41:57,638 [ scc.git] DEBUG Auto-merging Dockerfile 2025-09-18 00:41:57,638 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2025-09-18 00:41:57,638 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-18 00:41:57,639 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-18 00:41:57,641 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-09-18 00:41:57,645 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-09-18 00:41:57,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:41:57,789 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-09-18 00:41:57,792 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-09-18 00:41:57,794 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#535](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2025-09-18 00:41:57,796 [ scc.config] DEBUG Found github.token 2025-09-18 00:41:57,796 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2025-09-18 00:41:57,796 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:41:57,832 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:41:57,832 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:41:57,834 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:41:57,870 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:41:57,873 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141c288990> has no local changes 2025-09-18 00:41:57,873 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:41:57,878 [ scc.git] DEBUG [detached HEAD 3fdc987] merge master -Dorg -Ssuccess-only 2025-09-18 00:41:57,879 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:41:57,879 [ scc.git] INFO Overriding base-branch from master to develop 2025-09-18 00:41:57,879 [ scc.repo] DEBUG ## PRs found: 2025-09-18 00:41:58,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-09-18 00:41:58,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-09-18 00:41:59,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-09-18 00:41:59,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-09-18 00:42:00,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:42:00,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-18 00:42:01,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-09-18 00:42:01,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:42:01,757 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-09-18 00:42:02,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-09-18 00:42:02,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-09-18 00:42:03,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-09-18 00:42:03,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-18 00:42:04,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-09-18 00:42:04,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-09-18 00:42:04,459 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-09-18 00:42:04,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-09-18 00:42:05,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-09-18 00:42:05,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-09-18 00:42:06,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-09-18 00:42:06,359 [ scc.repo] DEBUG ## Branches found: 2025-09-18 00:42:06,359 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-09-18 00:42:06,359 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:42:06,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:42:06,362 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-09-18 00:42:06,364 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-18 00:42:06,364 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-09-18 00:42:06,367 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-09-18 00:42:06,376 [ scc.git] DEBUG Updating 4b4c755..03b9116 2025-09-18 00:42:06,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2025-09-18 00:42:07,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2025-09-18 00:42:08,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2025-09-18 00:42:08,256 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-09-18 00:42:08,554 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-09-18 00:42:08,554 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-09-18 00:42:08,558 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-09-18 00:42:08,857 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-09-18 00:42:08,857 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-09-18 00:42:08,861 [ scc.git] DEBUG ## Unique users: [] 2025-09-18 00:42:08,861 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:42:08,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:42:08,863 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-09-18 00:42:08,868 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:42:08,870 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-09-18 00:42:08,880 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-09-18 00:42:08,880 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-18 00:42:08,880 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-18 00:42:08,882 [ scc.git] DEBUG Calling 'git reset --hard 03b9116196e1a799dd18a666559613d912be01a5' 2025-09-18 00:42:08,886 [ scc.git] DEBUG HEAD is now at 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-09-18 00:42:09,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:09,077 [ scc.git] DEBUG Calling 'git merge-base 03b9116196e1a799dd18a666559613d912be01a5 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-09-18 00:42:09,082 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..03b9116196e1a799dd18a666559613d912be01a5' 2025-09-18 00:42:09,085 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#535](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-09-18 00:42:09,087 [ scc.config] DEBUG Found github.token 2025-09-18 00:42:09,087 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-09-18 00:42:09,087 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-09-18 00:42:09,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:42:09,093 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-09-18 00:42:09,102 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-18 00:42:09,104 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-09-18 00:42:09,104 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-09-18 00:42:09,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:09,475 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-18 00:42:09,513 [ scc.git] DEBUG Get sha1 of %s 2025-09-18 00:42:09,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-18 00:42:09,515 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:42:09,551 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:42:09,554 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f141c2e5ed0> has no local changes 2025-09-18 00:42:09,554 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..03b9116 Previously merged: - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:42:09,560 [ scc.git] DEBUG [detached HEAD 64604ab] merge master -Dorg -Ssuccess-only 2025-09-18 00:42:09,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:09,561 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-18 00:42:09,627 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2025-09-18 00:42:09,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:09,882 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2025-09-18 00:42:09,884 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2025-09-18 00:42:10,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:10,274 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2025-09-18 00:42:10,276 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2025-09-18 00:42:10,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:10,672 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2025-09-18 00:42:10,674 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2025-09-18 00:42:11,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:11,059 [ scc.config] DEBUG Found submodule.omero-figure.url 2025-09-18 00:42:11,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:11,451 [ scc.config] DEBUG Found submodule.omero-figure.branch 2025-09-18 00:42:11,453 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2025-09-18 00:42:11,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:11,860 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2025-09-18 00:42:11,862 [ scc.config] DEBUG Found submodule.omero-gallery.url 2025-09-18 00:42:12,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:12,274 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2025-09-18 00:42:12,275 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2025-09-18 00:42:12,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:12,664 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2025-09-18 00:42:12,666 [ scc.config] DEBUG Found submodule.omero-mapr.url 2025-09-18 00:42:13,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:13,064 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2025-09-18 00:42:13,066 [ scc.config] DEBUG Found submodule.omero-metadata.url 2025-09-18 00:42:13,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:13,458 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2025-09-18 00:42:13,460 [ scc.config] DEBUG Found submodule.omero-parade.url 2025-09-18 00:42:13,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:13,860 [ scc.config] DEBUG Found submodule.omero-parade.branch 2025-09-18 00:42:13,862 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2025-09-18 00:42:14,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:14,249 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2025-09-18 00:42:14,250 [ scc.config] DEBUG Found submodule.omero-rois.url 2025-09-18 00:42:14,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:14,646 [ scc.config] DEBUG Found submodule.omero-signup.url 2025-09-18 00:42:15,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:15,051 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2025-09-18 00:42:15,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:15,460 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2025-09-18 00:42:15,462 [ scc.config] DEBUG Found submodule.omero-upload.url 2025-09-18 00:42:15,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:15,850 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2025-09-18 00:42:16,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:16,250 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2025-09-18 00:42:16,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:16,688 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2025-09-18 00:42:16,690 [ scc.config] DEBUG Found submodule.omero-weberror.url 2025-09-18 00:42:17,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:17,085 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2025-09-18 00:42:17,087 [ scc.config] DEBUG Found submodule.omero-webtest.url 2025-09-18 00:42:17,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:17,482 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2025-09-18 00:42:17,484 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2025-09-18 00:42:17,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:17,880 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2025-09-18 00:42:17,882 [ scc.config] DEBUG Found submodule.scripts.url 2025-09-18 00:42:18,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-18 00:42:18,281 [ scc.config] DEBUG Found submodule.scripts.branch 2025-09-18 00:42:18,281 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-18 00:42:18,355 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1420066a50> has local changes 2025-09-18 00:42:18,355 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-zarr Excluded PRs: - PR 174 will-moore 'Skip wells' (stage: draft) - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..66607c99 Previously merged: - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 610 will-moore 'Add docs/contributing.rst' - PR 612 will-moore 'Script version' - PR 616 Rdornier 'Fix labels around border' Conflicting PRs (not included): - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 637 Rdornier 'Fix scalebar position' - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..00e0207 Previously merged: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..03b9116 Previously merged: - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/535/)' 2025-09-18 00:42:18,366 [ scc.git] DEBUG [detached HEAD 22a3860] merge master -Dorg -Ssuccess-only 2025-09-18 00:42:18,366 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2025-09-18 00:42:18,366 [ scc.merge] INFO Repository: ome/omero-plugins 2025-09-18 00:42:18,366 [ scc.merge] INFO Already up to date. 2025-09-18 00:42:18,366 [ scc.merge] INFO 2025-09-18 00:42:18,366 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,366 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-09-18 00:42:18,366 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-09-18 00:42:18,366 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-09-18 00:42:18,366 [ scc.merge] INFO 2025-09-18 00:42:18,366 [ scc.merge] INFO Repository: ome/minimal-omero-client 2025-09-18 00:42:18,366 [ scc.merge] INFO Already up to date. 2025-09-18 00:42:18,366 [ scc.merge] INFO 2025-09-18 00:42:18,366 [ scc.merge] INFO 2025-09-18 00:42:18,366 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2025-09-18 00:42:18,366 [ scc.merge] INFO Excluded PRs: 2025-09-18 00:42:18,366 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2025-09-18 00:42:18,366 [ scc.merge] INFO Already up to date. 2025-09-18 00:42:18,366 [ scc.merge] INFO 2025-09-18 00:42:18,366 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,366 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:42:18,366 [ scc.merge] INFO 2025-09-18 00:42:18,366 [ scc.merge] INFO Repository: ome/omero-cli-render 2025-09-18 00:42:18,367 [ scc.merge] INFO Excluded PRs: 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2025-09-18 00:42:18,367 [ scc.merge] INFO Already up to date. 2025-09-18 00:42:18,367 [ scc.merge] INFO 2025-09-18 00:42:18,367 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:42:18,367 [ scc.merge] INFO 2025-09-18 00:42:18,367 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2025-09-18 00:42:18,367 [ scc.merge] INFO Excluded PRs: 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' (stage: draft) 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment) 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2025-09-18 00:42:18,367 [ scc.merge] INFO Updating 11d3587..37ea700 2025-09-18 00:42:18,367 [ scc.merge] INFO Previously merged: 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-18 00:42:18,367 [ scc.merge] INFO 2025-09-18 00:42:18,367 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-09-18 00:42:18,367 [ scc.merge] INFO 2025-09-18 00:42:18,367 [ scc.merge] INFO Repository: ome/omero-figure 2025-09-18 00:42:18,367 [ scc.merge] INFO Excluded PRs: 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft) 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2025-09-18 00:42:18,367 [ scc.merge] INFO Updating 9cc36cde..66607c99 2025-09-18 00:42:18,367 [ scc.merge] INFO Previously merged: 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-18 00:42:18,367 [ scc.merge] INFO 2025-09-18 00:42:18,367 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,367 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2025-09-18 00:42:18,368 [ scc.merge] INFO 2025-09-18 00:42:18,368 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6' 2025-09-18 00:42:18,368 [ scc.merge] INFO 2025-09-18 00:42:18,368 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2025-09-18 00:42:18,368 [ scc.merge] INFO Already up to date. 2025-09-18 00:42:18,368 [ scc.merge] INFO 2025-09-18 00:42:18,368 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:42:18,368 [ scc.merge] INFO 2025-09-18 00:42:18,368 [ scc.merge] INFO Repository: ome/omero-gallery 2025-09-18 00:42:18,368 [ scc.merge] INFO Already up to date. 2025-09-18 00:42:18,368 [ scc.merge] INFO 2025-09-18 00:42:18,368 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-09-18 00:42:18,368 [ scc.merge] INFO 2025-09-18 00:42:18,368 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-09-18 00:42:18,368 [ scc.merge] INFO 2025-09-18 00:42:18,368 [ scc.merge] INFO Repository: ome/omero-iviewer 2025-09-18 00:42:18,368 [ scc.merge] INFO Excluded PRs: 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2025-09-18 00:42:18,368 [ scc.merge] INFO Updating 7a798ce..bb94cf8 2025-09-18 00:42:18,368 [ scc.merge] INFO Previously merged: 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-18 00:42:18,368 [ scc.merge] INFO 2025-09-18 00:42:18,368 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-09-18 00:42:18,368 [ scc.merge] INFO 2025-09-18 00:42:18,368 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-18 00:42:18,368 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-09-18 00:42:18,368 [ scc.merge] INFO 2025-09-18 00:42:18,368 [ scc.merge] INFO Repository: ome/omero-mapr 2025-09-18 00:42:18,369 [ scc.merge] INFO Excluded PRs: 2025-09-18 00:42:18,369 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2025-09-18 00:42:18,369 [ scc.merge] INFO Already up to date. 2025-09-18 00:42:18,369 [ scc.merge] INFO 2025-09-18 00:42:18,369 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,369 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2025-09-18 00:42:18,369 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-18 00:42:18,369 [ scc.merge] INFO 2025-09-18 00:42:18,369 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-18 00:42:18,369 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:42:18,369 [ scc.merge] INFO 2025-09-18 00:42:18,369 [ scc.merge] INFO Repository: ome/omero-metadata 2025-09-18 00:42:18,369 [ scc.merge] INFO Updating 3cd120c..55060a2 2025-09-18 00:42:18,369 [ scc.merge] INFO Previously merged: 2025-09-18 00:42:18,369 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-18 00:42:18,369 [ scc.merge] INFO 2025-09-18 00:42:18,369 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-18 00:42:18,369 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-09-18 00:42:18,369 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-09-18 00:42:18,369 [ scc.merge] INFO 2025-09-18 00:42:18,369 [ scc.merge] INFO Repository: ome/omero-parade 2025-09-18 00:42:18,369 [ scc.merge] INFO Excluded PRs: 2025-09-18 00:42:18,369 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2025-09-18 00:42:18,369 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2025-09-18 00:42:18,369 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2025-09-18 00:42:18,369 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2025-09-18 00:42:18,369 [ scc.merge] INFO Already up to date. 2025-09-18 00:42:18,369 [ scc.merge] INFO 2025-09-18 00:42:18,369 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,369 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-09-18 00:42:18,369 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-09-18 00:42:18,369 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-09-18 00:42:18,369 [ scc.merge] INFO 2025-09-18 00:42:18,369 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2025-09-18 00:42:18,369 [ scc.merge] INFO Already up to date. 2025-09-18 00:42:18,369 [ scc.merge] INFO 2025-09-18 00:42:18,369 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,369 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:42:18,369 [ scc.merge] INFO 2025-09-18 00:42:18,369 [ scc.merge] INFO Repository: ome/omero-rois 2025-09-18 00:42:18,369 [ scc.merge] INFO Excluded PRs: 2025-09-18 00:42:18,369 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-09-18 00:42:18,369 [ scc.merge] INFO Already up to date. 2025-09-18 00:42:18,369 [ scc.merge] INFO 2025-09-18 00:42:18,369 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,369 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2025-09-18 00:42:18,369 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:42:18,369 [ scc.merge] INFO 2025-09-18 00:42:18,369 [ scc.merge] INFO Repository: ome/omero-signup 2025-09-18 00:42:18,369 [ scc.merge] INFO Already up to date. 2025-09-18 00:42:18,369 [ scc.merge] INFO 2025-09-18 00:42:18,370 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,370 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:42:18,370 [ scc.merge] INFO 2025-09-18 00:42:18,370 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-18 00:42:18,370 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2025-09-18 00:42:18,370 [ scc.merge] INFO 2025-09-18 00:42:18,370 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2025-09-18 00:42:18,370 [ scc.merge] INFO Excluded PRs: 2025-09-18 00:42:18,370 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2025-09-18 00:42:18,370 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2025-09-18 00:42:18,370 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2025-09-18 00:42:18,370 [ scc.merge] INFO Already up to date. 2025-09-18 00:42:18,370 [ scc.merge] INFO 2025-09-18 00:42:18,370 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,370 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-09-18 00:42:18,370 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps' 2025-09-18 00:42:18,370 [ scc.merge] INFO 2025-09-18 00:42:18,370 [ scc.merge] INFO Repository: ome/omero-upload 2025-09-18 00:42:18,370 [ scc.merge] INFO Already up to date. 2025-09-18 00:42:18,370 [ scc.merge] INFO 2025-09-18 00:42:18,370 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,370 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:42:18,370 [ scc.merge] INFO 2025-09-18 00:42:18,370 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2025-09-18 00:42:18,370 [ scc.merge] INFO Updating deab817..160d894 2025-09-18 00:42:18,370 [ scc.merge] INFO Previously merged: 2025-09-18 00:42:18,370 [ scc.merge] INFO - PR 20 jburel 'Build' 2025-09-18 00:42:18,370 [ scc.merge] INFO 2025-09-18 00:42:18,370 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,370 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:42:18,370 [ scc.merge] INFO 2025-09-18 00:42:18,370 [ scc.merge] INFO Repository: ome/omero-web-zarr 2025-09-18 00:42:18,370 [ scc.merge] INFO Excluded PRs: 2025-09-18 00:42:18,370 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2025-09-18 00:42:18,370 [ scc.merge] INFO Updating 8f3c313..00e0207 2025-09-18 00:42:18,370 [ scc.merge] INFO Previously merged: 2025-09-18 00:42:18,370 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2025-09-18 00:42:18,370 [ scc.merge] INFO 2025-09-18 00:42:18,370 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,370 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2025-09-18 00:42:18,370 [ scc.merge] INFO 2025-09-18 00:42:18,370 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-18 00:42:18,370 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-09-18 00:42:18,370 [ scc.merge] INFO 2025-09-18 00:42:18,370 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2025-09-18 00:42:18,370 [ scc.merge] INFO Already up to date. 2025-09-18 00:42:18,370 [ scc.merge] INFO 2025-09-18 00:42:18,370 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,370 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:42:18,370 [ scc.merge] INFO 2025-09-18 00:42:18,370 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2025-09-18 00:42:18,370 [ scc.merge] INFO Already up to date. 2025-09-18 00:42:18,371 [ scc.merge] INFO 2025-09-18 00:42:18,371 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,371 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-18 00:42:18,371 [ scc.merge] INFO 2025-09-18 00:42:18,371 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2025-09-18 00:42:18,371 [ scc.merge] INFO Already up to date. 2025-09-18 00:42:18,371 [ scc.merge] INFO 2025-09-18 00:42:18,371 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-18 00:42:18,371 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2025-09-18 00:42:18,371 [ scc.merge] INFO 2025-09-18 00:42:18,371 [ scc.merge] INFO Repository: ome/scripts 2025-09-18 00:42:18,371 [ scc.merge] INFO Excluded PRs: 2025-09-18 00:42:18,371 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-09-18 00:42:18,371 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-09-18 00:42:18,371 [ scc.merge] INFO Updating 4b4c755..03b9116 2025-09-18 00:42:18,371 [ scc.merge] INFO Previously merged: 2025-09-18 00:42:18,371 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2025-09-18 00:42:18,371 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2025-09-18 00:42:18,371 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2025-09-18 00:42:18,371 [ scc.merge] INFO 2025-09-18 00:42:18,371 [ scc.merge] INFO Merged PRs: 2025-09-18 00:42:18,371 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-09-18 00:42:18,371 [ scc.merge] INFO 2025-09-18 00:42:18,371 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-18 00:42:18,371 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-09-18 00:42:18,371 [ scc.merge] INFO 2025-09-18 00:42:18,371 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-09-18 00:42:18,371 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-09-18 00:42:18,373 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-09-18 00:42:18,375 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,377 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,377 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-09-18 00:42:18,377 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-09-18 00:42:18,379 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,381 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,381 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-09-18 00:42:18,381 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-09-18 00:42:18,383 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-09-18 00:42:18,385 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,387 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,387 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-09-18 00:42:18,387 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-09-18 00:42:18,389 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-09-18 00:42:18,391 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-09-18 00:42:18,393 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-09-18 00:42:18,395 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,397 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,397 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-09-18 00:42:18,397 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-09-18 00:42:18,399 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-09-18 00:42:18,401 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,403 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,403 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-09-18 00:42:18,403 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,405 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,405 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-09-18 00:42:18,405 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-09-18 00:42:18,407 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-09-18 00:42:18,409 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-09-18 00:42:18,411 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-09-18 00:42:18,413 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-09-18 00:42:18,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-09-18 00:42:18,415 [ scc.git] DEBUG Calling 'git remote' 2025-09-18 00:42:18,417 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 63bf3b3] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 24d9c16] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-09-18 00:43:04,557 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-09-18 00:43:13,871 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-09-18 00:43:16,340 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-09-18 00:43:21,062 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-09-18 00:43:59,653 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS