Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-06-05 00:33:51,860 [ scc.config] DEBUG Found github.token
2024-06-05 00:33:51,862 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-06-05 00:33:52,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:33:52,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:33:52,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-06-05 00:33:52,957 [ scc.gh] DEBUG 4322 remaining from 5000 (Reset at 00:06
2024-06-05 00:33:52,958 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-05 00:33:52,961 [ scc.git] DEBUG Check current status
2024-06-05 00:33:52,962 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-05 00:33:52,965 [ scc.git] DEBUG 05f561e Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542
2024-06-05 00:33:52,965 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-05 00:33:53,002 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-06-05 00:33:53,005 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-06-05 00:33:53,126 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421)
2024-06-05 00:33:53,130 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-06-05 00:33:53,133 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-06-05 00:33:53,138 [ scc.config] DEBUG Found remote.origin.url
2024-06-05 00:33:53,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-06-05 00:33:53,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-05 00:33:54,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-05 00:33:54,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-05 00:33:55,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-05 00:33:55,178 [ scc.git] DEBUG Resetting...
2024-06-05 00:33:55,179 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-06-05 00:33:55,189 [ scc.git] DEBUG HEAD is now at 05f561e Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542
2024-06-05 00:33:55,190 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-06-05 00:33:55,272 [ scc.git] DEBUG Check current status
2024-06-05 00:33:55,272 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-05 00:33:55,278 [ scc.git] DEBUG 05f561e Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542
2024-06-05 00:33:55,279 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-05 00:33:55,329 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-06-05 00:33:55,332 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-06-05 00:33:55,336 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421)
2024-06-05 00:33:55,341 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-06-05 00:33:55,347 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-06-05 00:33:55,348 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-06-05 00:33:55,349 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-06-05 00:33:55,349 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-06-05 00:33:55,349 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-06-05 00:33:55,349 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-06-05 00:33:55,349 [ scc.repo] DEBUG ## PRs found:
2024-06-05 00:33:55,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-06-05 00:33:55,617 [ scc.repo] DEBUG ## Branches found:
2024-06-05 00:33:55,617 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:33:55,617 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:33:55,622 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-05 00:33:55,626 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-05 00:33:55,626 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-05 00:33:55,632 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-05 00:33:55,637 [ scc.git] DEBUG Already up to date.
2024-06-05 00:33:55,637 [ scc.git] DEBUG ## Unique users: []
2024-06-05 00:33:55,637 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:33:55,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:33:55,641 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-05 00:33:55,688 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:33:55,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:33:55,692 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-05 00:33:55,828 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f543f9edd90> has no local changes
2024-06-05 00:33:55,828 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)'
2024-06-05 00:33:55,854 [ scc.git] DEBUG [detached HEAD dbfc10b] merge master -Dorg -Snone
2024-06-05 00:33:55,854 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-06-05 00:33:55,854 [ scc.merge] INFO Already up to date.
2024-06-05 00:33:55,854 [ scc.merge] INFO
2024-06-05 00:33:55,854 [ scc.merge] INFO
2024-06-05 00:33:55,855 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-06-05 00:33:55,855 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-06-05 00:33:58,359 [ scc.config] DEBUG Found github.token
2024-06-05 00:33:58,362 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-06-05 00:33:58,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:33:58,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:33:59,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-06-05 00:33:59,396 [ scc.gh] DEBUG 4314 remaining from 5000 (Reset at 00:06
2024-06-05 00:33:59,397 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-05 00:33:59,400 [ scc.git] DEBUG Check current status
2024-06-05 00:33:59,401 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-05 00:33:59,405 [ scc.git] DEBUG dbfc10b merge master -Dorg -Snone
2024-06-05 00:33:59,405 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-05 00:33:59,454 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-06-05 00:33:59,459 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-06-05 00:33:59,463 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421)
2024-06-05 00:33:59,467 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-06-05 00:33:59,471 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-06-05 00:33:59,476 [ scc.config] DEBUG Found remote.origin.url
2024-06-05 00:33:59,476 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-06-05 00:33:59,478 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-06-05 00:33:59,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-06-05 00:34:00,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-05 00:34:00,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-05 00:34:01,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-05 00:34:01,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-05 00:34:01,652 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-05 00:34:01,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-06-05 00:34:01,706 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-05 00:34:01,710 [ scc.git] DEBUG Check current status
2024-06-05 00:34:01,710 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-05 00:34:01,715 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-06-05 00:34:01,716 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-05 00:34:01,773 [ scc.config] DEBUG Found remote.origin.url
2024-06-05 00:34:02,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-06-05 00:34:02,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-05 00:34:03,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-05 00:34:03,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-05 00:34:03,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-05 00:34:03,863 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-05 00:34:03,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-05 00:34:03,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-06-05 00:34:03,905 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-05 00:34:03,909 [ scc.git] DEBUG Check current status
2024-06-05 00:34:03,909 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-05 00:34:03,913 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-06-05 00:34:03,914 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-05 00:34:03,960 [ scc.config] DEBUG Found remote.origin.url
2024-06-05 00:34:04,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-06-05 00:34:04,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-05 00:34:05,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-05 00:34:05,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-05 00:34:06,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-05 00:34:06,064 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-05 00:34:06,107 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-05 00:34:06,108 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-06-05 00:34:06,108 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-05 00:34:06,112 [ scc.git] DEBUG Check current status
2024-06-05 00:34:06,113 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-05 00:34:06,116 [ scc.git] DEBUG d3a65421 Merge pull request #410 from jburel/python_wheel
2024-06-05 00:34:06,117 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-05 00:34:06,160 [ scc.config] DEBUG Found remote.origin.url
2024-06-05 00:34:06,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-06-05 00:34:07,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-05 00:34:07,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-05 00:34:07,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-05 00:34:08,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-05 00:34:08,379 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-05 00:34:08,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-05 00:34:08,421 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-06-05 00:34:08,421 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-05 00:34:08,425 [ scc.git] DEBUG Check current status
2024-06-05 00:34:08,426 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-05 00:34:08,430 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-06-05 00:34:08,430 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-05 00:34:08,523 [ scc.config] DEBUG Found remote.origin.url
2024-06-05 00:34:08,525 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-06-05 00:34:08,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-06-05 00:34:09,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-05 00:34:09,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-05 00:34:10,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-05 00:34:10,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-05 00:34:10,585 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-05 00:34:10,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-05 00:34:10,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-06-05 00:34:10,627 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-05 00:34:10,632 [ scc.git] DEBUG Check current status
2024-06-05 00:34:10,632 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-05 00:34:10,636 [ scc.git] DEBUG 9c94fd493 Bump version: 5.26.0 → 5.26.1.dev0
2024-06-05 00:34:10,637 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-05 00:34:10,688 [ scc.config] DEBUG Found remote.origin.url
2024-06-05 00:34:11,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-06-05 00:34:11,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-05 00:34:11,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-05 00:34:12,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-05 00:34:12,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-05 00:34:12,776 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-05 00:34:12,824 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-05 00:34:12,824 [ scc.git] DEBUG Resetting...
2024-06-05 00:34:12,824 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-06-05 00:34:12,830 [ scc.git] DEBUG HEAD is now at dbfc10b merge master -Dorg -Snone
2024-06-05 00:34:12,830 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-06-05 00:34:12,883 [ scc.git] DEBUG Check current status
2024-06-05 00:34:12,883 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-05 00:34:12,887 [ scc.git] DEBUG dbfc10b merge master -Dorg -Snone
2024-06-05 00:34:12,888 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-05 00:34:12,928 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-06-05 00:34:12,931 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-06-05 00:34:12,935 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421)
2024-06-05 00:34:12,939 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-06-05 00:34:12,942 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-06-05 00:34:12,942 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-06-05 00:34:12,943 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-06-05 00:34:12,943 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-06-05 00:34:12,943 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-06-05 00:34:12,943 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-06-05 00:34:12,943 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-06-05 00:34:12,943 [ scc.repo] DEBUG ## PRs found:
2024-06-05 00:34:13,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-06-05 00:34:13,218 [ scc.repo] DEBUG ## Branches found:
2024-06-05 00:34:13,218 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:34:13,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:34:13,223 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-05 00:34:13,227 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-05 00:34:13,228 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-05 00:34:13,233 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-05 00:34:13,238 [ scc.git] DEBUG Already up to date.
2024-06-05 00:34:13,238 [ scc.git] DEBUG ## Unique users: []
2024-06-05 00:34:13,238 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:34:13,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:34:13,242 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-05 00:34:13,281 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:34:13,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:34:13,285 [ scc.repo] DEBUG ## PRs found:
2024-06-05 00:34:13,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-06-05 00:34:14,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-06-05 00:34:14,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-06-05 00:34:15,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-06-05 00:34:15,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-05 00:34:16,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-06-05 00:34:16,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-06-05 00:34:16,573 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-06-05 00:34:16,573 [ scc.repo] DEBUG ## Branches found:
2024-06-05 00:34:16,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-06-05 00:34:16,573 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:34:16,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:34:16,578 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-05 00:34:16,583 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-05 00:34:16,583 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-05 00:34:16,589 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-05 00:34:16,596 [ scc.git] DEBUG Already up to date.
2024-06-05 00:34:16,597 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-06-05 00:34:16,991 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-06-05 00:34:16,992 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-06-05 00:34:16,996 [ scc.git] DEBUG ## Unique users: []
2024-06-05 00:34:16,996 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:34:16,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:34:17,001 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-06-05 00:34:17,006 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:34:17,010 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-06-05 00:34:17,092 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-06-05 00:34:17,092 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-06-05 00:34:17,092 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-06-05 00:34:17,092 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-06-05 00:34:17,093 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-06-05 00:34:17,093 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-06-05 00:34:17,093 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-06-05 00:34:17,093 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-06-05 00:34:17,093 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-06-05 00:34:17,094 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-05 00:34:17,097 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-06-05 00:34:17,097 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-06-05 00:34:17,098 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-06-05 00:34:17,098 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-06-05 00:34:17,098 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-06-05 00:34:17,098 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-06-05 00:34:17,098 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-06-05 00:34:17,099 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-06-05 00:34:17,100 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-06-05 00:34:17,100 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-06-05 00:34:17,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:34:17,257 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-05 00:34:17,300 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:34:17,300 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:34:17,304 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-05 00:34:17,347 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-05 00:34:17,353 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6d6c86c460> has no local changes
2024-06-05 00:34:17,354 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)'
2024-06-05 00:34:17,362 [ scc.git] DEBUG [detached HEAD 571ef81] merge master -Dorg -Ssuccess-only
2024-06-05 00:34:17,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-05 00:34:17,363 [ scc.repo] DEBUG ## PRs found:
2024-06-05 00:34:17,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-06-05 00:34:18,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-06-05 00:34:18,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-06-05 00:34:19,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-06-05 00:34:19,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-05 00:34:20,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-05 00:34:20,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-06-05 00:34:21,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-06-05 00:34:21,060 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-06-05 00:34:21,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-06-05 00:34:22,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-06-05 00:34:22,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-06-05 00:34:22,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-06-05 00:34:22,976 [ scc.repo] DEBUG ## Branches found:
2024-06-05 00:34:22,977 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-06-05 00:34:22,977 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:34:22,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:34:22,981 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-05 00:34:22,985 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-05 00:34:22,985 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-05 00:34:22,991 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-05 00:34:22,997 [ scc.git] DEBUG Already up to date.
2024-06-05 00:34:22,997 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-06-05 00:34:23,417 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-06-05 00:34:23,417 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-06-05 00:34:23,422 [ scc.git] DEBUG ## Unique users: []
2024-06-05 00:34:23,422 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:34:23,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:34:23,427 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-06-05 00:34:23,432 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:34:23,436 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-06-05 00:34:23,447 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-06-05 00:34:23,448 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-05 00:34:23,451 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-06-05 00:34:23,452 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-06-05 00:34:23,452 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-06-05 00:34:23,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:34:23,616 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-05 00:34:23,659 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:34:23,659 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:34:23,664 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-05 00:34:23,705 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-05 00:34:23,711 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6d6b78bc40> has no local changes
2024-06-05 00:34:23,712 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)'
2024-06-05 00:34:23,720 [ scc.git] DEBUG [detached HEAD 4156514] merge master -Dorg -Ssuccess-only
2024-06-05 00:34:23,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-05 00:34:23,721 [ scc.repo] DEBUG ## PRs found:
2024-06-05 00:34:24,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-06-05 00:34:24,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-06-05 00:34:25,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-06-05 00:34:25,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-06-05 00:34:26,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-05 00:34:26,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-05 00:34:27,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-06-05 00:34:27,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-06-05 00:34:28,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-06-05 00:34:28,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-06-05 00:34:28,703 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-06-05 00:34:29,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-06-05 00:34:29,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-06-05 00:34:30,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-06-05 00:34:30,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-05 00:34:31,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-05 00:34:31,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-06-05 00:34:32,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-06-05 00:34:32,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-05 00:34:33,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-05 00:34:33,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-06-05 00:34:34,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-06-05 00:34:34,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-06-05 00:34:35,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-06-05 00:34:35,105 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-06-05 00:34:35,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-06-05 00:34:35,595 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-06-05 00:34:36,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378 HTTP/1.1" 200 None
2024-06-05 00:34:36,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378/comments HTTP/1.1" 200 None
2024-06-05 00:34:37,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-06-05 00:34:37,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-06-05 00:34:37,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-06-05 00:34:38,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-05 00:34:38,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-06-05 00:34:39,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-06-05 00:34:39,377 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-06-05 00:34:39,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-06-05 00:34:40,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-06-05 00:34:40,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-06-05 00:34:41,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-05 00:34:41,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-05 00:34:42,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-06-05 00:34:42,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-06-05 00:34:43,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-06-05 00:34:43,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-06-05 00:34:43,578 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-06-05 00:34:44,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-06-05 00:34:44,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-06-05 00:34:45,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-06-05 00:34:45,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-06-05 00:34:46,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-06-05 00:34:46,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-05 00:34:46,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-06-05 00:34:47,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-06-05 00:34:47,381 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-06-05 00:34:47,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-06-05 00:34:48,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-06-05 00:34:48,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-05 00:34:49,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-06-05 00:34:49,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-06-05 00:34:49,719 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-06-05 00:34:50,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-06-05 00:34:50,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-06-05 00:34:51,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-06-05 00:34:51,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-05 00:34:52,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-06-05 00:34:52,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-06-05 00:34:52,574 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-06-05 00:34:53,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-06-05 00:34:53,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-06-05 00:34:54,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-06-05 00:34:54,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-05 00:34:54,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-06-05 00:34:55,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-06-05 00:34:55,365 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-06-05 00:34:55,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-06-05 00:34:56,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-06-05 00:34:56,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-06-05 00:34:57,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-06-05 00:34:57,273 [ scc.repo] DEBUG ## Branches found:
2024-06-05 00:34:57,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-06-05 00:34:57,274 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:34:57,274 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:34:57,280 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-05 00:34:57,288 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-05 00:34:57,288 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-05 00:34:57,294 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-05 00:34:57,300 [ scc.git] DEBUG Already up to date.
2024-06-05 00:34:57,300 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-06-05 00:34:57,788 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-05 00:34:57,788 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-06-05 00:34:57,794 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-06-05 00:34:58,199 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-05 00:34:58,199 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-06-05 00:34:58,204 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-06-05 00:34:58,614 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-05 00:34:58,614 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-06-05 00:34:58,619 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-06-05 00:34:59,016 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-05 00:34:59,017 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-06-05 00:34:59,021 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-06-05 00:34:59,451 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-05 00:34:59,452 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-06-05 00:34:59,457 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-06-05 00:34:59,819 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-05 00:34:59,819 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-06-05 00:34:59,824 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-06-05 00:35:00,218 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-05 00:35:00,219 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-06-05 00:35:00,225 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-06-05 00:35:00,676 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-05 00:35:00,676 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-06-05 00:35:00,682 [ scc.git] DEBUG ## Unique users: []
2024-06-05 00:35:00,682 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:35:00,682 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:00,686 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-06-05 00:35:00,697 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:00,701 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-06-05 00:35:00,758 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-06-05 00:35:00,758 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-06-05 00:35:00,759 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-05 00:35:00,764 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-06-05 00:35:00,764 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-06-05 00:35:00,764 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-06-05 00:35:00,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:35:00,929 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-06-05 00:35:00,940 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:00,945 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-06-05 00:35:01,046 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-06-05 00:35:01,046 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-06-05 00:35:01,047 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-05 00:35:01,054 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-06-05 00:35:01,054 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-06-05 00:35:01,055 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-06-05 00:35:01,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:35:01,344 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-06-05 00:35:01,356 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:01,361 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-06-05 00:35:01,430 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-06-05 00:35:01,430 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-05 00:35:01,434 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-06-05 00:35:01,434 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-06-05 00:35:01,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:35:01,752 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-06-05 00:35:01,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:01,771 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-06-05 00:35:01,878 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-06-05 00:35:01,879 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-06-05 00:35:01,881 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-05 00:35:01,885 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-06-05 00:35:01,885 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-06-05 00:35:01,885 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-06-05 00:35:02,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:35:02,178 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-06-05 00:35:02,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:02,194 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-06-05 00:35:02,227 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-05 00:35:02,230 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-06-05 00:35:02,230 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-06-05 00:35:02,230 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-06-05 00:35:02,230 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-06-05 00:35:02,230 [ scc.git] DEBUG create mode 100644 connect.py
2024-06-05 00:35:02,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:35:02,593 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-06-05 00:35:02,603 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:02,607 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-06-05 00:35:02,663 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-06-05 00:35:02,664 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-05 00:35:02,667 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-06-05 00:35:02,667 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-06-05 00:35:03,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:35:03,042 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-06-05 00:35:03,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:03,057 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-06-05 00:35:03,129 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-06-05 00:35:03,131 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-05 00:35:03,135 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-06-05 00:35:03,135 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-06-05 00:35:03,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:35:03,460 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-06-05 00:35:03,471 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:03,476 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-06-05 00:35:03,524 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-06-05 00:35:03,525 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-05 00:35:03,533 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-06-05 00:35:03,533 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-06-05 00:35:03,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:35:03,880 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-05 00:35:03,924 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:35:03,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:03,933 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-05 00:35:03,974 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-05 00:35:03,983 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6d6c86c430> has no local changes
2024-06-05 00:35:03,984 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)'
2024-06-05 00:35:03,995 [ scc.git] DEBUG [detached HEAD fd4f6cad] merge master -Dorg -Ssuccess-only
2024-06-05 00:35:03,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-05 00:35:03,996 [ scc.git] INFO Overriding base-branch from master to develop
2024-06-05 00:35:03,996 [ scc.repo] DEBUG ## PRs found:
2024-06-05 00:35:04,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-06-05 00:35:05,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-06-05 00:35:05,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-06-05 00:35:06,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-06-05 00:35:06,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-06-05 00:35:07,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-06-05 00:35:07,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-06-05 00:35:07,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-06-05 00:35:08,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-05 00:35:08,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-06-05 00:35:09,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-06-05 00:35:09,376 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-06-05 00:35:09,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-06-05 00:35:10,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-06-05 00:35:10,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-06-05 00:35:11,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-06-05 00:35:11,374 [ scc.repo] DEBUG ## Branches found:
2024-06-05 00:35:11,374 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-06-05 00:35:11,374 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:35:11,374 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:11,379 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-06-05 00:35:11,384 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-05 00:35:11,384 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-06-05 00:35:11,389 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-06-05 00:35:11,395 [ scc.git] DEBUG Already up to date.
2024-06-05 00:35:11,396 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-06-05 00:35:11,978 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-06-05 00:35:11,979 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-06-05 00:35:11,983 [ scc.git] DEBUG ## Unique users: []
2024-06-05 00:35:11,984 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:35:11,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:11,988 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-05 00:35:11,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:12,000 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-05 00:35:12,043 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-06-05 00:35:12,043 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-06-05 00:35:12,043 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-05 00:35:12,044 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-05 00:35:12,048 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a'
2024-06-05 00:35:12,054 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-06-05 00:35:12,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:35:12,226 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-05 00:35:12,233 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a'
2024-06-05 00:35:12,238 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#81](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-06-05 00:35:12,243 [ scc.config] DEBUG Found github.token
2024-06-05 00:35:12,243 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-06-05 00:35:12,243 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-05 00:35:12,286 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:35:12,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:12,291 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-05 00:35:12,331 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-05 00:35:12,338 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6d6b767640> has no local changes
2024-06-05 00:35:12,338 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)'
2024-06-05 00:35:12,352 [ scc.git] DEBUG [detached HEAD 6cc90b8] merge master -Dorg -Ssuccess-only
2024-06-05 00:35:12,353 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-05 00:35:12,353 [ scc.repo] DEBUG ## PRs found:
2024-06-05 00:35:12,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-06-05 00:35:13,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/558 HTTP/1.1" 200 None
2024-06-05 00:35:13,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None
2024-06-05 00:35:14,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-05 00:35:14,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-05 00:35:15,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None
2024-06-05 00:35:15,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/575f7bbc72aad997963937297f08156ca6f7dd5e?per_page=1 HTTP/1.1" 200 None
2024-06-05 00:35:16,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None
2024-06-05 00:35:16,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/status HTTP/1.1" 200 None
2024-06-05 00:35:16,518 [ scc.repo] DEBUG - PR 558 jburel 'Update readme'
2024-06-05 00:35:17,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555 HTTP/1.1" 200 None
2024-06-05 00:35:17,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555/comments HTTP/1.1" 200 None
2024-06-05 00:35:17,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f HTTP/1.1" 200 None
2024-06-05 00:35:18,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-05 00:35:18,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-05 00:35:19,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f HTTP/1.1" 200 None
2024-06-05 00:35:19,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/59392ac61e24b2ee642c3cdcae6d3f8dd514394f?per_page=1 HTTP/1.1" 200 None
2024-06-05 00:35:20,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f HTTP/1.1" 200 None
2024-06-05 00:35:20,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f/status HTTP/1.1" 200 None
2024-06-05 00:35:20,824 [ scc.repo] DEBUG - PR 555 chris-allan 'Archive status'
2024-06-05 00:35:21,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554 HTTP/1.1" 200 None
2024-06-05 00:35:21,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-06-05 00:35:22,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-06-05 00:35:22,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-06-05 00:35:23,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-06-05 00:35:23,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-05 00:35:24,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-05 00:35:24,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-06-05 00:35:25,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-06-05 00:35:25,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-06-05 00:35:25,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-06-05 00:35:26,000 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-06-05 00:35:26,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-06-05 00:35:26,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-06-05 00:35:27,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-06-05 00:35:27,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-05 00:35:28,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-05 00:35:28,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-06-05 00:35:29,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-06-05 00:35:29,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-06-05 00:35:30,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-06-05 00:35:30,183 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-06-05 00:35:30,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-06-05 00:35:31,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-06-05 00:35:31,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-06-05 00:35:32,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-05 00:35:32,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-05 00:35:32,600 [ scc.repo] DEBUG ## Branches found:
2024-06-05 00:35:32,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-06-05 00:35:32,600 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:35:32,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:32,605 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-05 00:35:32,610 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-05 00:35:32,610 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-05 00:35:32,615 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-05 00:35:32,620 [ scc.git] DEBUG Already up to date.
2024-06-05 00:35:32,620 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-06-05 00:35:33,185 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-06-05 00:35:33,186 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-06-05 00:35:33,194 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-06-05 00:35:33,605 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-06-05 00:35:33,605 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-06-05 00:35:33,610 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head'
2024-06-05 00:35:34,327 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-06-05 00:35:34,327 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD
2024-06-05 00:35:34,332 [ scc.git] DEBUG Calling 'git fetch origin pull/558/head'
2024-06-05 00:35:35,082 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-06-05 00:35:35,082 [ scc.git] DEBUG * branch refs/pull/558/head -> FETCH_HEAD
2024-06-05 00:35:35,087 [ scc.git] DEBUG ## Unique users: []
2024-06-05 00:35:35,087 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:35:35,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:35,092 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-06-05 00:35:35,098 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:35,102 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-06-05 00:35:35,146 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-06-05 00:35:35,147 [ scc.git] DEBUG Auto-merging setup.py
2024-06-05 00:35:35,148 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-05 00:35:35,152 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-06-05 00:35:35,152 [ scc.git] DEBUG setup.py | 1 +
2024-06-05 00:35:35,152 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-06-05 00:35:35,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:35:35,323 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-06-05 00:35:35,330 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:35,335 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-06-05 00:35:35,432 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-06-05 00:35:35,433 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-06-05 00:35:35,434 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-05 00:35:35,439 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-06-05 00:35:35,439 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-06-05 00:35:35,439 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-06-05 00:35:35,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:35:35,742 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59392ac61e24b2ee642c3cdcae6d3f8dd514394f'
2024-06-05 00:35:35,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:35,754 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Archive status) 59392ac61e24b2ee642c3cdcae6d3f8dd514394f'
2024-06-05 00:35:35,809 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-06-05 00:35:35,811 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-05 00:35:35,816 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.tree.js | 3 +++
2024-06-05 00:35:35,816 [ scc.git] DEBUG .../templates/webclient/annotations/includes/core_metadata.html | 6 ++++++
2024-06-05 00:35:35,816 [ scc.git] DEBUG omeroweb/webclient/tree.py | 7 +++++--
2024-06-05 00:35:35,816 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 1 +
2024-06-05 00:35:35,817 [ scc.git] DEBUG 4 files changed, 15 insertions(+), 2 deletions(-)
2024-06-05 00:35:36,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:35:36,149 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...575f7bbc72aad997963937297f08156ca6f7dd5e'
2024-06-05 00:35:36,155 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:36,159 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 558 (Update readme) 575f7bbc72aad997963937297f08156ca6f7dd5e'
2024-06-05 00:35:36,176 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-05 00:35:36,179 [ scc.git] DEBUG README.rst | 42 +++++++++++++++++++++---------------------
2024-06-05 00:35:36,179 [ scc.git] DEBUG 1 file changed, 21 insertions(+), 21 deletions(-)
2024-06-05 00:35:36,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:35:36,566 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-05 00:35:36,609 [ scc.git] DEBUG Get sha1 of %s
2024-06-05 00:35:36,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-05 00:35:36,614 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-05 00:35:36,659 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-05 00:35:36,668 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6d686f03d0> has no local changes
2024-06-05 00:35:36,668 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 555 chris-allan 'Archive status'
- PR 558 jburel 'Update readme'
Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)'
2024-06-05 00:35:36,679 [ scc.git] DEBUG [detached HEAD 9c9faeb98] merge master -Dorg -Ssuccess-only
2024-06-05 00:35:36,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-05 00:35:36,680 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-05 00:35:36,736 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-06-05 00:35:36,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:35:36,986 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-06-05 00:35:37,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:35:37,391 [ scc.config] DEBUG Found submodule.omero-py.url
2024-06-05 00:35:37,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:35:37,799 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-06-05 00:35:38,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:35:38,203 [ scc.config] DEBUG Found submodule.omero-web.url
2024-06-05 00:35:38,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-05 00:35:38,602 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-05 00:35:38,631 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6d6c860d90> has local changes
2024-06-05 00:35:38,631 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 555 chris-allan 'Archive status'
- PR 558 jburel 'Update readme'
Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)'
2024-06-05 00:35:38,640 [ scc.git] DEBUG [detached HEAD 262be51] merge master -Dorg -Ssuccess-only
2024-06-05 00:35:38,641 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-06-05 00:35:38,641 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-06-05 00:35:38,641 [ scc.merge] INFO Already up to date.
2024-06-05 00:35:38,641 [ scc.merge] INFO
2024-06-05 00:35:38,641 [ scc.merge] INFO
2024-06-05 00:35:38,641 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-06-05 00:35:38,641 [ scc.merge] INFO Already up to date.
2024-06-05 00:35:38,641 [ scc.merge] INFO
2024-06-05 00:35:38,641 [ scc.merge] INFO Merged PRs:
2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-06-05 00:35:38,642 [ scc.merge] INFO
2024-06-05 00:35:38,642 [ scc.merge] INFO Repository: ome/omero-marshal
2024-06-05 00:35:38,642 [ scc.merge] INFO Excluded PRs:
2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-06-05 00:35:38,642 [ scc.merge] INFO Already up to date.
2024-06-05 00:35:38,642 [ scc.merge] INFO
2024-06-05 00:35:38,642 [ scc.merge] INFO Merged PRs:
2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-06-05 00:35:38,642 [ scc.merge] INFO
2024-06-05 00:35:38,642 [ scc.merge] INFO Repository: ome/omero-py
2024-06-05 00:35:38,642 [ scc.merge] INFO Excluded PRs:
2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-06-05 00:35:38,642 [ scc.merge] INFO Already up to date.
2024-06-05 00:35:38,642 [ scc.merge] INFO
2024-06-05 00:35:38,642 [ scc.merge] INFO Merged PRs:
2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-06-05 00:35:38,643 [ scc.merge] INFO
2024-06-05 00:35:38,643 [ scc.merge] INFO Repository: ome/omero-scripts
2024-06-05 00:35:38,643 [ scc.merge] INFO Excluded PRs:
2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-06-05 00:35:38,643 [ scc.merge] INFO Already up to date.
2024-06-05 00:35:38,643 [ scc.merge] INFO
2024-06-05 00:35:38,643 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-06-05 00:35:38,643 [ scc.merge] INFO
2024-06-05 00:35:38,643 [ scc.merge] INFO Repository: ome/omero-web
2024-06-05 00:35:38,643 [ scc.merge] INFO Excluded PRs:
2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-06-05 00:35:38,643 [ scc.merge] INFO Already up to date.
2024-06-05 00:35:38,643 [ scc.merge] INFO
2024-06-05 00:35:38,643 [ scc.merge] INFO Merged PRs:
2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 555 chris-allan 'Archive status'
2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 558 jburel 'Update readme'
2024-06-05 00:35:38,643 [ scc.merge] INFO
2024-06-05 00:35:38,643 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-06-05 00:35:38,643 [ scc.git] DEBUG Calling 'git remote'
2024-06-05 00:35:38,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-06-05 00:35:38,648 [ scc.git] DEBUG Calling 'git remote'
2024-06-05 00:35:38,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-05 00:35:38,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-06-05 00:35:38,652 [ scc.git] DEBUG Calling 'git remote'
2024-06-05 00:35:38,655 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-05 00:35:38,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-06-05 00:35:38,656 [ scc.git] DEBUG Calling 'git remote'
2024-06-05 00:35:38,659 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-05 00:35:38,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-06-05 00:35:38,660 [ scc.git] DEBUG Calling 'git remote'
2024-06-05 00:35:38,663 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-05 00:35:38,663 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-06-05 00:35:38,663 [ scc.git] DEBUG Calling 'git remote'
2024-06-05 00:35:38,668 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from d3a65421
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 5a90893
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 9c94fd493
nothing to commit, working tree clean
HEAD detached from 05f561e
nothing to commit, working tree clean
2024-06-05 00:36:08,614 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
![[Jenkins]](/jenkins/static/f5fa13f0/images/svgs/logo.svg){kind=logo}
