Skipping 122 KB..
Full Log already explicitly excluding 'omero_iviewer.__pycache__' via
01:00:16 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
01:00:16 you can try to use `exclude_package_data`, or `include-package-data=False` in
01:00:16 combination with a more fine grained `package-data` configuration.
01:00:16
01:00:16 You can read more about "package data files" on setuptools documentation page:
01:00:16
01:00:16 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
01:00:16
01:00:16
01:00:16 [^1]: For Python, any directory (with suitable naming) can be imported,
01:00:16 even if it does not contain any `.py` files.
01:00:16 On the other hand, currently there is no concept of package data
01:00:16 directory, all directories are treated like packages.
01:00:16 ********************************************************************************
01:00:16
01:00:16 !!
01:00:16 check.warn(importable)
01:00:16 /tmp/build-env-ddstrhok/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer' is absent from the `packages` configuration.
01:00:16 !!
01:00:16
01:00:16 ********************************************************************************
01:00:16 ############################
01:00:16 # Package would be ignored #
01:00:16 ############################
01:00:16 Python recognizes 'omero_iviewer.static.omero_iviewer' as an importable package[^1],
01:00:16 but it is absent from setuptools' `packages` configuration.
01:00:16
01:00:16 This leads to an ambiguous overall configuration. If you want to distribute this
01:00:16 package, please make sure that 'omero_iviewer.static.omero_iviewer' is explicitly added
01:00:16 to the `packages` configuration field.
01:00:16
01:00:16 Alternatively, you can also rely on setuptools' discovery methods
01:00:16 (for example by using `find_namespace_packages(...)`/`find_namespace:`
01:00:16 instead of `find_packages(...)`/`find:`).
01:00:16
01:00:16 You can read more about "package discovery" on setuptools documentation page:
01:00:16
01:00:16 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
01:00:16
01:00:16 If you don't want 'omero_iviewer.static.omero_iviewer' to be distributed and are
01:00:16 already explicitly excluding 'omero_iviewer.static.omero_iviewer' via
01:00:16 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
01:00:16 you can try to use `exclude_package_data`, or `include-package-data=False` in
01:00:16 combination with a more fine grained `package-data` configuration.
01:00:16
01:00:16 You can read more about "package data files" on setuptools documentation page:
01:00:16
01:00:16 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
01:00:16
01:00:16
01:00:16 [^1]: For Python, any directory (with suitable naming) can be imported,
01:00:16 even if it does not contain any `.py` files.
01:00:16 On the other hand, currently there is no concept of package data
01:00:16 directory, all directories are treated like packages.
01:00:16 ********************************************************************************
01:00:16
01:00:16 !!
01:00:16 check.warn(importable)
01:00:16 /tmp/build-env-ddstrhok/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer.css' is absent from the `packages` configuration.
01:00:16 !!
01:00:16
01:00:16 ********************************************************************************
01:00:16 ############################
01:00:16 # Package would be ignored #
01:00:16 ############################
01:00:16 Python recognizes 'omero_iviewer.static.omero_iviewer.css' as an importable package[^1],
01:00:16 but it is absent from setuptools' `packages` configuration.
01:00:16
01:00:16 This leads to an ambiguous overall configuration. If you want to distribute this
01:00:16 package, please make sure that 'omero_iviewer.static.omero_iviewer.css' is explicitly added
01:00:16 to the `packages` configuration field.
01:00:16
01:00:16 Alternatively, you can also rely on setuptools' discovery methods
01:00:16 (for example by using `find_namespace_packages(...)`/`find_namespace:`
01:00:16 instead of `find_packages(...)`/`find:`).
01:00:16
01:00:16 You can read more about "package discovery" on setuptools documentation page:
01:00:16
01:00:16 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
01:00:16
01:00:16 If you don't want 'omero_iviewer.static.omero_iviewer.css' to be distributed and are
01:00:16 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css' via
01:00:16 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
01:00:16 you can try to use `exclude_package_data`, or `include-package-data=False` in
01:00:16 combination with a more fine grained `package-data` configuration.
01:00:16
01:00:16 You can read more about "package data files" on setuptools documentation page:
01:00:16
01:00:16 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
01:00:16
01:00:16
01:00:16 [^1]: For Python, any directory (with suitable naming) can be imported,
01:00:16 even if it does not contain any `.py` files.
01:00:16 On the other hand, currently there is no concept of package data
01:00:16 directory, all directories are treated like packages.
01:00:16 ********************************************************************************
01:00:16
01:00:16 !!
01:00:16 check.warn(importable)
01:00:16 /tmp/build-env-ddstrhok/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer.css.fonts' is absent from the `packages` configuration.
01:00:16 !!
01:00:16
01:00:16 ********************************************************************************
01:00:16 ############################
01:00:16 # Package would be ignored #
01:00:16 ############################
01:00:16 Python recognizes 'omero_iviewer.static.omero_iviewer.css.fonts' as an importable package[^1],
01:00:16 but it is absent from setuptools' `packages` configuration.
01:00:16
01:00:16 This leads to an ambiguous overall configuration. If you want to distribute this
01:00:16 package, please make sure that 'omero_iviewer.static.omero_iviewer.css.fonts' is explicitly added
01:00:16 to the `packages` configuration field.
01:00:16
01:00:16 Alternatively, you can also rely on setuptools' discovery methods
01:00:16 (for example by using `find_namespace_packages(...)`/`find_namespace:`
01:00:16 instead of `find_packages(...)`/`find:`).
01:00:16
01:00:16 You can read more about "package discovery" on setuptools documentation page:
01:00:16
01:00:16 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
01:00:16
01:00:16 If you don't want 'omero_iviewer.static.omero_iviewer.css.fonts' to be distributed and are
01:00:16 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css.fonts' via
01:00:16 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
01:00:16 you can try to use `exclude_package_data`, or `include-package-data=False` in
01:00:16 combination with a more fine grained `package-data` configuration.
01:00:16
01:00:16 You can read more about "package data files" on setuptools documentation page:
01:00:16
01:00:16 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
01:00:16
01:00:16
01:00:16 [^1]: For Python, any directory (with suitable naming) can be imported,
01:00:16 even if it does not contain any `.py` files.
01:00:16 On the other hand, currently there is no concept of package data
01:00:16 directory, all directories are treated like packages.
01:00:16 ********************************************************************************
01:00:16
01:00:16 !!
01:00:16 check.warn(importable)
01:00:16 /tmp/build-env-ddstrhok/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer.css.images' is absent from the `packages` configuration.
01:00:16 !!
01:00:16
01:00:16 ********************************************************************************
01:00:16 ############################
01:00:16 # Package would be ignored #
01:00:16 ############################
01:00:16 Python recognizes 'omero_iviewer.static.omero_iviewer.css.images' as an importable package[^1],
01:00:16 but it is absent from setuptools' `packages` configuration.
01:00:16
01:00:16 This leads to an ambiguous overall configuration. If you want to distribute this
01:00:16 package, please make sure that 'omero_iviewer.static.omero_iviewer.css.images' is explicitly added
01:00:16 to the `packages` configuration field.
01:00:16
01:00:16 Alternatively, you can also rely on setuptools' discovery methods
01:00:16 (for example by using `find_namespace_packages(...)`/`find_namespace:`
01:00:16 instead of `find_packages(...)`/`find:`).
01:00:16
01:00:16 You can read more about "package discovery" on setuptools documentation page:
01:00:16
01:00:16 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
01:00:16
01:00:16 If you don't want 'omero_iviewer.static.omero_iviewer.css.images' to be distributed and are
01:00:16 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css.images' via
01:00:16 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
01:00:16 you can try to use `exclude_package_data`, or `include-package-data=False` in
01:00:16 combination with a more fine grained `package-data` configuration.
01:00:16
01:00:16 You can read more about "package data files" on setuptools documentation page:
01:00:16
01:00:16 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
01:00:16
01:00:16
01:00:16 [^1]: For Python, any directory (with suitable naming) can be imported,
01:00:16 even if it does not contain any `.py` files.
01:00:16 On the other hand, currently there is no concept of package data
01:00:16 directory, all directories are treated like packages.
01:00:16 ********************************************************************************
01:00:16
01:00:16 !!
01:00:16 check.warn(importable)
01:00:16 /tmp/build-env-ddstrhok/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.templates.omero_iviewer' is absent from the `packages` configuration.
01:00:16 !!
01:00:16
01:00:16 ********************************************************************************
01:00:16 ############################
01:00:16 # Package would be ignored #
01:00:16 ############################
01:00:16 Python recognizes 'omero_iviewer.templates.omero_iviewer' as an importable package[^1],
01:00:16 but it is absent from setuptools' `packages` configuration.
01:00:16
01:00:16 This leads to an ambiguous overall configuration. If you want to distribute this
01:00:16 package, please make sure that 'omero_iviewer.templates.omero_iviewer' is explicitly added
01:00:16 to the `packages` configuration field.
01:00:16
01:00:16 Alternatively, you can also rely on setuptools' discovery methods
01:00:16 (for example by using `find_namespace_packages(...)`/`find_namespace:`
01:00:16 instead of `find_packages(...)`/`find:`).
01:00:16
01:00:16 You can read more about "package discovery" on setuptools documentation page:
01:00:16
01:00:16 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
01:00:16
01:00:16 If you don't want 'omero_iviewer.templates.omero_iviewer' to be distributed and are
01:00:16 already explicitly excluding 'omero_iviewer.templates.omero_iviewer' via
01:00:16 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
01:00:16 you can try to use `exclude_package_data`, or `include-package-data=False` in
01:00:16 combination with a more fine grained `package-data` configuration.
01:00:16
01:00:16 You can read more about "package data files" on setuptools documentation page:
01:00:16
01:00:16 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
01:00:16
01:00:16
01:00:16 [^1]: For Python, any directory (with suitable naming) can be imported,
01:00:16 even if it does not contain any `.py` files.
01:00:16 On the other hand, currently there is no concept of package data
01:00:16 directory, all directories are treated like packages.
01:00:16 ********************************************************************************
01:00:16
01:00:16 !!
01:00:16 check.warn(importable)
01:00:16 copying omero_iviewer/README.rst -> build/lib/omero_iviewer
01:00:16 creating build/lib/omero_iviewer/__pycache__
01:00:16 copying omero_iviewer/__pycache__/__init__.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
01:00:16 copying omero_iviewer/__pycache__/utils.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
01:00:16 copying omero_iviewer/__pycache__/version.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
01:00:16 creating build/lib/omero_iviewer/static/omero_iviewer
01:00:16 copying omero_iviewer/static/omero_iviewer/deps.js -> build/lib/omero_iviewer/static/omero_iviewer
01:00:16 copying omero_iviewer/static/omero_iviewer/main.js -> build/lib/omero_iviewer/static/omero_iviewer
01:00:16 copying omero_iviewer/static/omero_iviewer/openwith.js -> build/lib/omero_iviewer/static/omero_iviewer
01:00:16 copying omero_iviewer/static/omero_iviewer/vendors.js -> build/lib/omero_iviewer/static/omero_iviewer
01:00:16 copying omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> build/lib/omero_iviewer/static/omero_iviewer
01:00:16 creating build/lib/omero_iviewer/static/omero_iviewer/css
01:00:16 copying omero_iviewer/static/omero_iviewer/css/all.min.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:00:16 copying omero_iviewer/static/omero_iviewer/css/app.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:00:16 copying omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:00:16 copying omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:00:16 copying omero_iviewer/static/omero_iviewer/css/slider.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:00:16 copying omero_iviewer/static/omero_iviewer/css/spectrum.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:00:16 copying omero_iviewer/static/omero_iviewer/css/spinner.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:00:16 copying omero_iviewer/static/omero_iviewer/css/theme.css -> build/lib/omero_iviewer/static/omero_iviewer/css
01:00:16 creating build/lib/omero_iviewer/static/omero_iviewer/css/fonts
01:00:16 copying omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> build/lib/omero_iviewer/static/omero_iviewer/css/fonts
01:00:16 creating build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/collapse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/expand.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/gradient.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/label.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/line.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/link.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/mask.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/point.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/polygon.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/polyline.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/projection.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/select.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/sortable.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
01:00:16 creating build/lib/omero_iviewer/templates/omero_iviewer
01:00:16 copying omero_iviewer/templates/omero_iviewer/index.html -> build/lib/omero_iviewer/templates/omero_iviewer
01:00:16 installing to build/bdist.linux-x86_64/wheel
01:00:16 running install
01:00:16 running install_lib
01:00:16 creating build/bdist.linux-x86_64/wheel
01:00:16 creating build/bdist.linux-x86_64/wheel/omero_iviewer
01:00:16 copying build/lib/omero_iviewer/__init__.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:00:16 copying build/lib/omero_iviewer/apps.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:00:16 copying build/lib/omero_iviewer/iviewer_settings.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:00:16 copying build/lib/omero_iviewer/urls.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:00:16 copying build/lib/omero_iviewer/utils.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:00:16 copying build/lib/omero_iviewer/version.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:00:16 copying build/lib/omero_iviewer/views.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:00:16 copying build/lib/omero_iviewer/README.rst -> build/bdist.linux-x86_64/wheel/./omero_iviewer
01:00:16 creating build/bdist.linux-x86_64/wheel/omero_iviewer/__pycache__
01:00:16 copying build/lib/omero_iviewer/__pycache__/__init__.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
01:00:16 copying build/lib/omero_iviewer/__pycache__/utils.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
01:00:16 copying build/lib/omero_iviewer/__pycache__/version.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
01:00:16 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static
01:00:16 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/deps.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/main.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/openwith.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/vendors.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
01:00:16 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/all.min.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/app.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/slider.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/spectrum.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/spinner.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/theme.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
01:00:16 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css/fonts
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/fonts
01:00:16 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/expand.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/gradient.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/label.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/line.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/link.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/mask.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/point.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/polygon.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/polyline.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/projection.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/select.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sortable.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
01:00:16 creating build/bdist.linux-x86_64/wheel/omero_iviewer/templates
01:00:16 creating build/bdist.linux-x86_64/wheel/omero_iviewer/templates/omero_iviewer
01:00:16 copying build/lib/omero_iviewer/templates/omero_iviewer/index.html -> build/bdist.linux-x86_64/wheel/./omero_iviewer/templates/omero_iviewer
01:00:16 running install_egg_info
01:00:16 Copying omero_iviewer.egg-info to build/bdist.linux-x86_64/wheel/./omero_iviewer-0.16.0.dev0-py3.11.egg-info
01:00:16 running install_scripts
01:00:16 creating build/bdist.linux-x86_64/wheel/omero_iviewer-0.16.0.dev0.dist-info/WHEEL
01:00:16 creating '/home/omero/workspace/OMERO-web/omero-iviewer/plugin/dist/.tmp-75266d5l/omero_iviewer-0.16.0.dev0-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
01:00:16 adding 'omero_iviewer/README.rst'
01:00:16 adding 'omero_iviewer/__init__.py'
01:00:16 adding 'omero_iviewer/apps.py'
01:00:16 adding 'omero_iviewer/iviewer_settings.py'
01:00:16 adding 'omero_iviewer/urls.py'
01:00:16 adding 'omero_iviewer/utils.py'
01:00:16 adding 'omero_iviewer/version.py'
01:00:16 adding 'omero_iviewer/views.py'
01:00:16 adding 'omero_iviewer/__pycache__/__init__.cpython-311.pyc'
01:00:16 adding 'omero_iviewer/__pycache__/utils.cpython-311.pyc'
01:00:16 adding 'omero_iviewer/__pycache__/version.cpython-311.pyc'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/deps.js'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/main.js'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/openwith.js'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/vendors.js'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/all.min.css'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/app.css'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/bootstrap.min.css'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/ol3-viewer.css'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/slider.css'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/spectrum.css'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/spinner.css'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/theme.css'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/arrow.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse-left.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse-right.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/crosshair.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/dim_locked.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/drag_handle.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_label.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_line.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_point.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/ellipse.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/expand.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/gradient.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/label.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/line.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/link.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/mask.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/point.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/polygon.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/polyline.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/projection.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/rectangle.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/select.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/sortable.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png'
01:00:16 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png'
01:00:16 adding 'omero_iviewer/templates/omero_iviewer/index.html'
01:00:16 adding 'omero_iviewer-0.16.0.dev0.dist-info/licenses/LICENSE'
01:00:16 adding 'omero_iviewer-0.16.0.dev0.dist-info/METADATA'
01:00:16 adding 'omero_iviewer-0.16.0.dev0.dist-info/WHEEL'
01:00:16 adding 'omero_iviewer-0.16.0.dev0.dist-info/top_level.txt'
01:00:16 adding 'omero_iviewer-0.16.0.dev0.dist-info/RECORD'
01:00:16 removing build/bdist.linux-x86_64/wheel
01:00:16 Successfully built omero_iviewer-0.16.0.dev0.tar.gz and omero_iviewer-0.16.0.dev0-py3-none-any.whl
01:00:16 + cd dist
01:00:16 + for x in *.tar.gz
01:00:16 + pip install -U omero_iviewer-0.16.0.dev0.tar.gz
01:00:17 Processing ./omero_iviewer-0.16.0.dev0.tar.gz
01:00:17 Preparing metadata (setup.py): started
01:00:17 Preparing metadata (setup.py): finished with status 'done'
01:00:17 Requirement already satisfied: omero-web>=5.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-iviewer==0.16.0.dev0) (5.29.3.dev0)
01:00:17 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (5.21.1)
01:00:17 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.9.28)
01:00:17 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (4.2.24)
01:00:17 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (4.1.0)
01:00:17 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.7.0)
01:00:17 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (4.0)
01:00:17 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (6.11.0)
01:00:17 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (23.0.0)
01:00:17 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.9.1.dev0)
01:00:17 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (11.3.0)
01:00:17 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2025.2)
01:00:17 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.2.0)
01:00:17 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (25.0)
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01:00:17 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.9.2)
01:00:17 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.5.3)
01:00:17 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (1.4.4)
01:00:17 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (1.0.0)
01:00:17 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2.3.3)
01:00:17 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (6.0.2)
01:00:17 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.6.5)
01:00:17 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2.32.5)
01:00:17 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (80.9.0)
01:00:17 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.45.1)
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01:00:17 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.10)
01:00:17 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2.5.0)
01:00:17 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2025.8.3)
01:00:17 Building wheels for collected packages: omero-iviewer
01:00:17 DEPRECATION: Building 'omero-iviewer' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-iviewer'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:00:17 Building wheel for omero-iviewer (setup.py): started
01:00:17 Building wheel for omero-iviewer (setup.py): finished with status 'done'
01:00:17 Created wheel for omero-iviewer: filename=omero_iviewer-0.16.0.dev0-py3-none-any.whl size=822093 sha256=a9e7e7ca8b063b25f5a6c4a8725c745b9c1e051b58b1b46c6f0a2dd64b968c73
01:00:17 Stored in directory: /home/omero/.cache/pip/wheels/39/0e/e1/26101d0e34e19a3b65418b90a4c6a4c7ac66e18727f68d4155
01:00:17 Successfully built omero-iviewer
01:00:17 Installing collected packages: omero-iviewer
01:00:17 Successfully installed omero-iviewer-0.16.0.dev0
01:00:18 + omero config set omero.web.use_x_forwarded_host true
01:00:18 + omero config set omero.web.secure_proxy_ssl_header '["HTTP_X_FORWARDED_PROTO", "https"]'
01:00:19 + omero config append omero.web.apps '"omero_iviewer"'
01:00:20 + omero config set omero.web.viewer.view omero_iviewer.views.index
01:00:21 + omero config append omero.web.open_with '["omero_iviewer", "omero_iviewer_index", {"supported_objects":["images", "dataset", "well"], "script_url": "omero_iviewer/openwith.js", "label": "OMERO.iviewer"}]'
01:00:22 + pip install git+https://github.com/snoopycrimecop/omero-figure.git@merge_ci#egg=omero-figure
01:00:22 Collecting omero-figure
01:00:22 Cloning https://github.com/snoopycrimecop/omero-figure.git (to revision merge_ci) to /tmp/pip-install-znya9wgx/omero-figure_848177c41d3c4aafbec550698ab69113
01:00:22 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-figure.git /tmp/pip-install-znya9wgx/omero-figure_848177c41d3c4aafbec550698ab69113
01:00:23 Resolved https://github.com/snoopycrimecop/omero-figure.git to commit 4994af2e7855fa63e16e8fa146ecb72def144533
01:00:23 Preparing metadata (setup.py): started
01:00:24 Preparing metadata (setup.py): finished with status 'done'
01:00:24 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-figure) (5.29.3.dev0)
01:00:24 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (5.21.1)
01:00:24 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (0.9.28)
01:00:24 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (4.2.24)
01:00:24 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (4.1.0)
01:00:24 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (3.7.0)
01:00:24 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (4.0)
01:00:24 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (6.11.0)
01:00:24 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (23.0.0)
01:00:24 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (0.9.1.dev0)
01:00:24 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (11.3.0)
01:00:24 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (2025.2)
01:00:24 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (3.2.0)
01:00:24 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (25.0)
01:00:24 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (6.5.2)
01:00:24 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-figure) (3.9.2)
01:00:24 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-figure) (0.5.3)
01:00:24 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (1.4.4)
01:00:24 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (1.0.0)
01:00:24 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (2.3.3)
01:00:24 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (6.0.2)
01:00:24 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (3.6.5)
01:00:24 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (2.32.5)
01:00:24 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-figure) (80.9.0)
01:00:24 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-figure) (0.45.1)
01:00:24 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (3.4.3)
01:00:24 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (3.10)
01:00:24 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (2.5.0)
01:00:24 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (2025.8.3)
01:00:24 Building wheels for collected packages: omero-figure
01:00:24 DEPRECATION: Building 'omero-figure' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-figure'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:00:24 Building wheel for omero-figure (setup.py): started
01:00:35 Building wheel for omero-figure (setup.py): finished with status 'done'
01:00:35 Created wheel for omero-figure: filename=omero_figure-7.2.2.dev0-py3-none-any.whl size=1240922 sha256=d80332ed7def3e8779afec402a180d3c719ef40fe16a807a759e2a88110f628f
01:00:35 Stored in directory: /tmp/pip-ephem-wheel-cache-n3h78toa/wheels/7a/dc/8b/d40cd89a9e4e8dd92668ddd6fe211eba320b7e8a12637ec527
01:00:35 Successfully built omero-figure
01:00:35 Installing collected packages: omero-figure
01:00:35 Successfully installed omero-figure-7.2.2.dev0
01:00:35 + omero config append omero.web.apps '"omero_figure"'
01:00:36 + omero config append omero.web.ui.top_links '["Figure", "figure_index", {"title": "Open Figure in new tab", "target": "_blank"}]'
01:00:37 + omero config append omero.web.open_with '["omero_figure", "new_figure", {"supported_objects":["images"], "target": "_blank", "label": "OMERO.figure"}]'
01:00:38 + pip install https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
01:00:38 Collecting https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
01:00:39 Downloading https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
01:00:39 - 72.8 kB 3.4 MB/s 0:00:00
01:00:39 Preparing metadata (setup.py): started
01:00:39 Preparing metadata (setup.py): finished with status 'done'
01:00:39 Requirement already satisfied: omero-web>=5.6.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-parade==0.2.5.dev0) (5.29.3.dev0)
01:00:39 Requirement already satisfied: numpy in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-parade==0.2.5.dev0) (2.3.3)
01:00:39 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (5.21.1)
01:00:39 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.9.28)
01:00:39 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.2.24)
01:00:39 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.1.0)
01:00:39 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.7.0)
01:00:39 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.0)
01:00:39 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.11.0)
01:00:39 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (23.0.0)
01:00:39 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.9.1.dev0)
01:00:39 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (11.3.0)
01:00:39 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2025.2)
01:00:39 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.2.0)
01:00:39 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (25.0)
01:00:39 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.5.2)
01:00:39 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.9.2)
01:00:39 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.5.3)
01:00:39 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (1.4.4)
01:00:39 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (1.0.0)
01:00:39 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.0.2)
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01:00:39 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2.32.5)
01:00:39 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (80.9.0)
01:00:39 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.45.1)
01:00:39 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.4.3)
01:00:39 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.10)
01:00:39 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2.5.0)
01:00:39 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2025.8.3)
01:00:39 Building wheels for collected packages: omero-parade
01:00:39 DEPRECATION: Building 'omero-parade' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-parade'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:00:39 Building wheel for omero-parade (setup.py): started
01:00:44 Building wheel for omero-parade (setup.py): finished with status 'done'
01:00:44 Created wheel for omero-parade: filename=omero_parade-0.2.5.dev0-py3-none-any.whl size=299596 sha256=bc17d6a85973a5141d81a20b39311712cd67898e3d8e49c21fe6449f8457f413
01:00:44 Stored in directory: /tmp/pip-ephem-wheel-cache-7b_y1ywa/wheels/bd/68/cc/5b4555362bd6182a2bab73b3ef3d25504d19ab613a30f04fea
01:00:44 Successfully built omero-parade
01:00:44 Installing collected packages: omero-parade
01:00:44 Successfully installed omero-parade-0.2.5.dev0
01:00:45 + omero config append omero.web.apps '"omero_parade"'
01:00:45 + omero config append omero.web.ui.center_plugins '["Parade", "omero_parade/init.js.html", "omero_parade"]'
01:00:46 + pip install git+https://github.com/snoopycrimecop/omero-fpbioimage.git@merge_ci#egg=omero-fpbioimage
01:00:47 Collecting omero-fpbioimage
01:00:47 Cloning https://github.com/snoopycrimecop/omero-fpbioimage.git (to revision merge_ci) to /tmp/pip-install-slhoxu_y/omero-fpbioimage_2085d07f056e4e40bc03d9891e5d1d56
01:00:47 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-fpbioimage.git /tmp/pip-install-slhoxu_y/omero-fpbioimage_2085d07f056e4e40bc03d9891e5d1d56
01:00:49 Running command git checkout -b merge_ci --track origin/merge_ci
01:00:49 Switched to a new branch 'merge_ci'
01:00:49 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:00:49 Resolved https://github.com/snoopycrimecop/omero-fpbioimage.git to commit c94d2faab0a938965cab97802d9aea4f9771e0dc
01:00:49 Preparing metadata (setup.py): started
01:00:49 Preparing metadata (setup.py): finished with status 'done'
01:00:49 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-fpbioimage) (5.29.3.dev0)
01:00:49 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (5.21.1)
01:00:49 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (0.9.28)
01:00:49 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.2.24)
01:00:49 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.1.0)
01:00:49 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (3.7.0)
01:00:49 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.0)
01:00:49 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (6.11.0)
01:00:50 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (23.0.0)
01:00:50 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (0.9.1.dev0)
01:00:50 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (11.3.0)
01:00:50 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (2025.2)
01:00:50 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (3.2.0)
01:00:50 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (25.0)
01:00:50 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (6.5.2)
01:00:50 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-fpbioimage) (3.9.2)
01:00:50 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-fpbioimage) (0.5.3)
01:00:50 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (1.4.4)
01:00:50 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (1.0.0)
01:00:50 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.3.3)
01:00:50 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (6.0.2)
01:00:50 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.6.5)
01:00:50 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.32.5)
01:00:50 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-fpbioimage) (80.9.0)
01:00:50 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-fpbioimage) (0.45.1)
01:00:50 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.4.3)
01:00:50 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.10)
01:00:50 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.5.0)
01:00:50 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2025.8.3)
01:00:50 Building wheels for collected packages: omero-fpbioimage
01:00:50 DEPRECATION: Building 'omero-fpbioimage' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-fpbioimage'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:00:50 Building wheel for omero-fpbioimage (setup.py): started
01:00:50 Building wheel for omero-fpbioimage (setup.py): finished with status 'done'
01:00:50 Created wheel for omero-fpbioimage: filename=omero_fpbioimage-0.4.2.dev0-py3-none-any.whl size=6923065 sha256=ae1be27b745fcd64eb2ad795b20be162f8b1d386ba6cf64c9600d04c9cee9ae4
01:00:50 Stored in directory: /tmp/pip-ephem-wheel-cache-0abm6pjn/wheels/7f/4c/02/4b9f833e501995681f93910cf0ef1e684e35d2352b62477460
01:00:50 Successfully built omero-fpbioimage
01:00:50 Installing collected packages: omero-fpbioimage
01:00:50 Successfully installed omero-fpbioimage-0.4.2.dev0
01:00:50 + omero config append omero.web.apps '"omero_fpbioimage"'
01:00:51 + omero config append omero.web.open_with '["omero_fpbioimage", "fpbioimage_index", {"script_url": "fpbioimage/openwith.js", "supported_objects": ["image"], "label": "FPBioimage"}]'
01:00:52 + pip install git+https://github.com/snoopycrimecop/omero-gallery.git@merge_ci#egg=omero-gallery
01:00:52 Collecting omero-gallery
01:00:52 Cloning https://github.com/snoopycrimecop/omero-gallery.git (to revision merge_ci) to /tmp/pip-install-uj63amtb/omero-gallery_040a98501fdd44e2ac18a954d7125b90
01:00:52 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-gallery.git /tmp/pip-install-uj63amtb/omero-gallery_040a98501fdd44e2ac18a954d7125b90
01:00:53 Resolved https://github.com/snoopycrimecop/omero-gallery.git to commit c200b285804b38de74ba1df41a35deb088401448
01:00:53 Preparing metadata (setup.py): started
01:00:53 Preparing metadata (setup.py): finished with status 'done'
01:00:53 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-gallery) (5.29.3.dev0)
01:00:53 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (5.21.1)
01:00:53 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (0.9.28)
01:00:53 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.2.24)
01:00:53 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.1.0)
01:00:53 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (3.7.0)
01:00:53 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.0)
01:00:53 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (6.11.0)
01:00:53 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (23.0.0)
01:00:53 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (0.9.1.dev0)
01:00:53 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (11.3.0)
01:00:53 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (2025.2)
01:00:53 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (3.2.0)
01:00:53 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (25.0)
01:00:53 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (6.5.2)
01:00:53 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-gallery) (3.9.2)
01:00:53 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-gallery) (0.5.3)
01:00:53 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (1.4.4)
01:00:53 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (1.0.0)
01:00:53 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.3.3)
01:00:53 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (6.0.2)
01:00:53 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.6.5)
01:00:53 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.32.5)
01:00:53 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-gallery) (80.9.0)
01:00:53 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-gallery) (0.45.1)
01:00:53 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.4.3)
01:00:53 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.10)
01:00:53 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.5.0)
01:00:53 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2025.8.3)
01:00:53 Building wheels for collected packages: omero-gallery
01:00:53 DEPRECATION: Building 'omero-gallery' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-gallery'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:00:53 Building wheel for omero-gallery (setup.py): started
01:00:54 Building wheel for omero-gallery (setup.py): finished with status 'done'
01:00:54 Created wheel for omero-gallery: filename=omero_gallery-3.4.4.dev0-py3-none-any.whl size=308014 sha256=1e978a37f08bc462186d5c56a473016e1a0da044cd5ce91efdc3187165421bad
01:00:54 Stored in directory: /tmp/pip-ephem-wheel-cache-ol5vt7qy/wheels/2f/43/25/64e360f70273008be68f22554e6bbc580d6058b34db2dc01fe
01:00:54 Successfully built omero-gallery
01:00:54 Installing collected packages: omero-gallery
01:00:54 Successfully installed omero-gallery-3.4.4.dev0
01:00:54 + omero config append omero.web.apps '"omero_gallery"'
01:00:55 + omero config append omero.web.ui.top_links '["Gallery", "webgallery_index", {"title": "Browse Gallery"}]'
01:00:55 + omero config set omero.web.gallery.category_queries '{"all":{"label":"All Studies", "index":0, "query":"FIRST50:Name"}}'
01:00:56 + pip install git+https://github.com/snoopycrimecop/omero-mapr.git@merge_ci#egg=omero-mapr
01:00:57 Collecting omero-mapr
01:00:57 Cloning https://github.com/snoopycrimecop/omero-mapr.git (to revision merge_ci) to /tmp/pip-install-psxto99l/omero-mapr_89db2d25bd764c88ba2053babe513ba9
01:00:57 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-mapr.git /tmp/pip-install-psxto99l/omero-mapr_89db2d25bd764c88ba2053babe513ba9
01:00:58 Resolved https://github.com/snoopycrimecop/omero-mapr.git to commit 4f15a2cfaa3337f8526c25fc3c857ffcdcc46a41
01:00:58 Preparing metadata (setup.py): started
01:00:58 Preparing metadata (setup.py): finished with status 'done'
01:00:58 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-mapr) (2.32.5)
01:00:58 Requirement already satisfied: omero-web>=5.16.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web[redis]>=5.16.0->omero-mapr) (5.29.3.dev0)
01:00:58 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (5.21.1)
01:00:58 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.9.28)
01:00:58 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (4.2.24)
01:00:58 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (4.1.0)
01:00:58 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.7.0)
01:00:58 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (4.0)
01:00:58 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (6.11.0)
01:00:58 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (23.0.0)
01:00:58 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.9.1.dev0)
01:00:58 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (11.3.0)
01:00:58 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (2025.2)
01:00:58 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.2.0)
01:00:58 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (25.0)
01:00:58 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (6.5.2)
01:00:58 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.9.2)
01:00:58 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.5.3)
01:00:58 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (1.4.4)
01:00:58 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (1.0.0)
01:00:58 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (2.3.3)
01:00:58 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (6.0.2)
01:00:58 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.6.5)
01:00:58 Collecting django-redis==5.3.0 (from omero-web[redis]>=5.16.0->omero-mapr)
01:00:58 Using cached django_redis-5.3.0-py3-none-any.whl.metadata (31 kB)
01:00:58 Collecting redis!=4.0.0,!=4.0.1,>=3 (from django-redis==5.3.0->omero-web[redis]>=5.16.0->omero-mapr)
01:00:58 Using cached redis-6.4.0-py3-none-any.whl.metadata (10 kB)
01:00:58 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (80.9.0)
01:00:58 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.45.1)
01:00:58 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (3.4.3)
01:00:58 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (3.10)
01:00:58 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (2.5.0)
01:00:58 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (2025.8.3)
01:00:58 Using cached django_redis-5.3.0-py3-none-any.whl (30 kB)
01:00:58 Using cached redis-6.4.0-py3-none-any.whl (279 kB)
01:00:58 Building wheels for collected packages: omero-mapr
01:00:58 DEPRECATION: Building 'omero-mapr' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-mapr'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:00:58 Building wheel for omero-mapr (setup.py): started
01:00:59 Building wheel for omero-mapr (setup.py): finished with status 'done'
01:00:59 Created wheel for omero-mapr: filename=omero_mapr-0.5.4.dev0-py3-none-any.whl size=67208 sha256=cb95c16d026b8b661b811b0b54c331eb9986da9e17ea7bb30bdc4865b151f0f5
01:00:59 Stored in directory: /tmp/pip-ephem-wheel-cache-yzj9yj85/wheels/4c/63/ca/d95f4dd3e08412d91be258a0a0164ddd07340dc39cfc1314b7
01:00:59 Successfully built omero-mapr
01:00:59 Installing collected packages: redis, django-redis, omero-mapr
01:00:59
01:00:59 Successfully installed django-redis-5.3.0 omero-mapr-0.5.4.dev0 redis-6.4.0
01:00:59 + omero config append omero.web.apps '"omero_mapr"'
01:01:00 + omero config append omero.web.mapr.config '{"menu": "anyvalue", "config":{"default":["Any Value"], "all":[], "ns":["openmicroscopy.org/omero/client/mapAnnotation"], "label":"Any"}}'
01:01:01 + omero config append omero.web.ui.top_links '["Any Map Value", {"viewname": "maprindex_anyvalue"}, {"title": "Search for values in any Key-Value pair"}]'
01:01:02 + pip install git+https://github.com/snoopycrimecop/omero-weberror.git@merge_ci#egg=omero-weberror
01:01:02 Collecting omero-weberror
01:01:02 Cloning https://github.com/snoopycrimecop/omero-weberror.git (to revision merge_ci) to /tmp/pip-install-hg_i7vq6/omero-weberror_52ae1b5dde024207ad2cfbf3e79b83c0
01:01:02 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-weberror.git /tmp/pip-install-hg_i7vq6/omero-weberror_52ae1b5dde024207ad2cfbf3e79b83c0
01:01:03 Running command git checkout -b merge_ci --track origin/merge_ci
01:01:03 Switched to a new branch 'merge_ci'
01:01:03 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:01:03 Resolved https://github.com/snoopycrimecop/omero-weberror.git to commit a1a2f629f42a118ce4dce0ce0b3e2e2c3b3ecfb3
01:01:03 Preparing metadata (setup.py): started
01:01:03 Preparing metadata (setup.py): finished with status 'done'
01:01:03 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-weberror) (5.29.3.dev0)
01:01:03 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (5.21.1)
01:01:03 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (0.9.28)
01:01:03 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.2.24)
01:01:03 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.1.0)
01:01:03 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (3.7.0)
01:01:03 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.0)
01:01:03 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (6.11.0)
01:01:03 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (23.0.0)
01:01:03 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (0.9.1.dev0)
01:01:03 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (11.3.0)
01:01:03 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (2025.2)
01:01:03 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (3.2.0)
01:01:03 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (25.0)
01:01:03 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (6.5.2)
01:01:03 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-weberror) (3.9.2)
01:01:03 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-weberror) (0.5.3)
01:01:03 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (1.4.4)
01:01:03 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (1.0.0)
01:01:03 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.3.3)
01:01:03 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (6.0.2)
01:01:03 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.6.5)
01:01:03 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.32.5)
01:01:03 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-weberror) (80.9.0)
01:01:03 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-weberror) (0.45.1)
01:01:03 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.4.3)
01:01:03 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.10)
01:01:03 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.5.0)
01:01:03 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2025.8.3)
01:01:03 Building wheels for collected packages: omero-weberror
01:01:03 DEPRECATION: Building 'omero-weberror' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-weberror'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:01:03 Building wheel for omero-weberror (setup.py): started
01:01:04 Building wheel for omero-weberror (setup.py): finished with status 'done'
01:01:04 Created wheel for omero-weberror: filename=omero_weberror-0.4.2.dev0-py3-none-any.whl size=18085 sha256=78b890a03a4eca8aa0b841dec76cc157c8fecc9f0984c66ab0c1d1d4e3b8332e
01:01:04 Stored in directory: /tmp/pip-ephem-wheel-cache-a0j12r_t/wheels/1b/c4/e6/04bca3174ab41b8b747e8bf10caebc5c9c15b7a2eacb8b65c6
01:01:04 Successfully built omero-weberror
01:01:04 Installing collected packages: omero-weberror
01:01:04 Successfully installed omero-weberror-0.4.2.dev0
01:01:04 + omero config append omero.web.apps '"omero_weberror"'
01:01:05 + pip install git+https://github.com/snoopycrimecop/omero-webtest.git@merge_ci#egg=omero-webtest
01:01:05 Collecting omero-webtest
01:01:05 Cloning https://github.com/snoopycrimecop/omero-webtest.git (to revision merge_ci) to /tmp/pip-install-1r5h9hav/omero-webtest_b06cb2f0ed524a7bb285d6aaf99e5280
01:01:05 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-webtest.git /tmp/pip-install-1r5h9hav/omero-webtest_b06cb2f0ed524a7bb285d6aaf99e5280
01:01:06 Running command git checkout -b merge_ci --track origin/merge_ci
01:01:06 Switched to a new branch 'merge_ci'
01:01:06 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:01:06 Resolved https://github.com/snoopycrimecop/omero-webtest.git to commit 37f2f2089f6664115b9f21183c6124114c4cb4ed
01:01:06 Preparing metadata (setup.py): started
01:01:06 Preparing metadata (setup.py): finished with status 'done'
01:01:06 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-webtest) (5.29.3.dev0)
01:01:06 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (5.21.1)
01:01:06 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (0.9.28)
01:01:06 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.2.24)
01:01:06 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.1.0)
01:01:06 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (3.7.0)
01:01:06 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.0)
01:01:06 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (6.11.0)
01:01:06 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (23.0.0)
01:01:06 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (0.9.1.dev0)
01:01:06 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (11.3.0)
01:01:06 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (2025.2)
01:01:06 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (3.2.0)
01:01:06 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (25.0)
01:01:06 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (6.5.2)
01:01:06 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-webtest) (3.9.2)
01:01:06 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-webtest) (0.5.3)
01:01:06 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (1.4.4)
01:01:06 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (1.0.0)
01:01:06 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.3.3)
01:01:06 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (6.0.2)
01:01:06 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.6.5)
01:01:06 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.32.5)
01:01:06 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-webtest) (80.9.0)
01:01:06 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-webtest) (0.45.1)
01:01:06 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.4.3)
01:01:06 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.10)
01:01:06 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.5.0)
01:01:06 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2025.8.3)
01:01:06 Building wheels for collected packages: omero-webtest
01:01:06 DEPRECATION: Building 'omero-webtest' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-webtest'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:01:06 Building wheel for omero-webtest (setup.py): started
01:01:07 Building wheel for omero-webtest (setup.py): finished with status 'done'
01:01:07 Created wheel for omero-webtest: filename=omero_webtest-0.4.3.dev0-py3-none-any.whl size=89791 sha256=9ba8c23570c8097cedaa8bd2d4bda75a1975d8ab62e359e6285b55d9fd5357c9
01:01:07 Stored in directory: /tmp/pip-ephem-wheel-cache-_mp2_cy6/wheels/fd/26/7d/043e6c0814544fd87c3c46a6e949604651b87f011c6af32975
01:01:07 Successfully built omero-webtest
01:01:07 Installing collected packages: omero-webtest
01:01:07 Successfully installed omero-webtest-0.4.3.dev0
01:01:07 + omero config append omero.web.apps '"omero_webtest"'
01:01:08 + pip install git+https://github.com/German-BioImaging/omero-autotag.git@master
01:01:08 Collecting git+https://github.com/German-BioImaging/omero-autotag.git@master
01:01:08 Cloning https://github.com/German-BioImaging/omero-autotag.git (to revision master) to /tmp/pip-req-build-h8e9deui
01:01:08 Running command git clone --filter=blob:none --quiet https://github.com/German-BioImaging/omero-autotag.git /tmp/pip-req-build-h8e9deui
01:01:09 Resolved https://github.com/German-BioImaging/omero-autotag.git to commit abbd98b087dc4064c3cf5b566b11b0b3fc623bd1
01:01:09 Preparing metadata (setup.py): started
01:01:09 Preparing metadata (setup.py): finished with status 'done'
01:01:09 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-autotag==4.1.0) (5.29.3.dev0)
01:01:09 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (5.21.1)
01:01:09 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (0.9.28)
01:01:09 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (4.2.24)
01:01:09 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (4.1.0)
01:01:09 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (3.7.0)
01:01:09 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (4.0)
01:01:09 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (6.11.0)
01:01:09 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (23.0.0)
01:01:09 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (0.9.1.dev0)
01:01:09 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (11.3.0)
01:01:09 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (2025.2)
01:01:09 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (3.2.0)
01:01:09 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (25.0)
01:01:09 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (6.5.2)
01:01:09 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-autotag==4.1.0) (3.9.2)
01:01:09 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-autotag==4.1.0) (0.5.3)
01:01:09 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (1.4.4)
01:01:09 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (1.0.0)
01:01:09 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (2.3.3)
01:01:09 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (6.0.2)
01:01:09 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (3.6.5)
01:01:09 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (2.32.5)
01:01:09 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-autotag==4.1.0) (80.9.0)
01:01:09 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-autotag==4.1.0) (0.45.1)
01:01:09 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (3.4.3)
01:01:09 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (3.10)
01:01:09 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (2.5.0)
01:01:09 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (2025.8.3)
01:01:09 Building wheels for collected packages: omero-autotag
01:01:09 DEPRECATION: Building 'omero-autotag' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-autotag'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:01:09 Building wheel for omero-autotag (setup.py): started
01:01:37 Building wheel for omero-autotag (setup.py): finished with status 'done'
01:01:37 Created wheel for omero-autotag: filename=omero_autotag-4.1.0-py3-none-any.whl size=617818 sha256=cb9c3efe39e1f05554420b44087714fec1fe654b9ea28d8f63f33e2ef494d0c9
01:01:37 Stored in directory: /tmp/pip-ephem-wheel-cache-7dygq1c0/wheels/05/82/4d/a3af657cf0a0f2014bb3f28257ed2d48d57fb0820c44fc0de6
01:01:37 Successfully built omero-autotag
01:01:37 Installing collected packages: omero-autotag
01:01:37 Successfully installed omero-autotag-4.1.0
01:01:37 + omero config append omero.web.apps '"omero_autotag"'
01:01:38 + omero config append omero.web.ui.center_plugins '["Auto Tag", "omero_autotag/auto_tag_init.js.html", "auto_tag_panel"]'
01:01:39 + pip install git+https://github.com/German-BioImaging/omero-tagsearch.git@refs/pull/16/head
01:01:40 Collecting git+https://github.com/German-BioImaging/omero-tagsearch.git@refs/pull/16/head
01:01:40 Cloning https://github.com/German-BioImaging/omero-tagsearch.git (to revision refs/pull/16/head) to /tmp/pip-req-build-33lfbtz1
01:01:40 Running command git clone --filter=blob:none --quiet https://github.com/German-BioImaging/omero-tagsearch.git /tmp/pip-req-build-33lfbtz1
01:01:40 Did not find branch or tag 'refs/pull/16/head', assuming revision or ref.
01:01:40 Running command git fetch -q https://github.com/German-BioImaging/omero-tagsearch.git refs/pull/16/head
01:01:41 Running command git checkout -q 4f011465d4a6a6b59f201d315f5376a438410684
01:01:41 Resolved https://github.com/German-BioImaging/omero-tagsearch.git to commit 4f011465d4a6a6b59f201d315f5376a438410684
01:01:41 Preparing metadata (setup.py): started
01:01:41 Preparing metadata (setup.py): finished with status 'done'
01:01:41 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-tagsearch==4.2.0) (5.29.3.dev0)
01:01:41 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (5.21.1)
01:01:41 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.9.28)
01:01:41 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (4.2.24)
01:01:41 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (4.1.0)
01:01:41 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.7.0)
01:01:41 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (4.0)
01:01:41 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (6.11.0)
01:01:41 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (23.0.0)
01:01:41 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.9.1.dev0)
01:01:41 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (11.3.0)
01:01:41 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (2025.2)
01:01:41 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.2.0)
01:01:41 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (25.0)
01:01:41 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (6.5.2)
01:01:41 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.9.2)
01:01:41 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.5.3)
01:01:41 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (1.4.4)
01:01:41 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (1.0.0)
01:01:41 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (2.3.3)
01:01:41 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (6.0.2)
01:01:41 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.6.5)
01:01:41 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (2.32.5)
01:01:41 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-tagsearch==4.2.0) (80.9.0)
01:01:41 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.45.1)
01:01:41 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.4.3)
01:01:41 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.10)
01:01:41 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (2.5.0)
01:01:41 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (2025.8.3)
01:01:41 Building wheels for collected packages: omero-tagsearch
01:01:41 DEPRECATION: Building 'omero-tagsearch' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-tagsearch'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:01:41 Building wheel for omero-tagsearch (setup.py): started
01:01:42 Building wheel for omero-tagsearch (setup.py): finished with status 'done'
01:01:42 Created wheel for omero-tagsearch: filename=omero_tagsearch-4.2.0-py3-none-any.whl size=132257 sha256=3729ebe6933634986e5c93fd3edd9e3042fb06d54304a96283b4162439a90428
01:01:42 Stored in directory: /tmp/pip-ephem-wheel-cache-57p5s4dd/wheels/9e/ee/29/cd5c9acc8a621fd035a8c40cb7a1d30371fd6412f2fbe5e166
01:01:42 Successfully built omero-tagsearch
01:01:42 Installing collected packages: omero-tagsearch
01:01:42 Successfully installed omero-tagsearch-4.2.0
01:01:42 + omero config append omero.web.apps '"omero_tagsearch"'
01:01:43 + omero config append omero.web.ui.top_links '["Tag Search", "tagsearch"]'
01:01:43 + pip install git+https://github.com/snoopycrimecop/omero-web-zarr.git@merge_ci#egg=omero-web-zarr
01:01:44 Collecting omero-web-zarr
01:01:44 Cloning https://github.com/snoopycrimecop/omero-web-zarr.git (to revision merge_ci) to /tmp/pip-install-6ubt0b4x/omero-web-zarr_b50002c44ab94dbb9ac68d0c6e74923c
01:01:44 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-web-zarr.git /tmp/pip-install-6ubt0b4x/omero-web-zarr_b50002c44ab94dbb9ac68d0c6e74923c
01:01:45 Running command git checkout -b merge_ci --track origin/merge_ci
01:01:45 Switched to a new branch 'merge_ci'
01:01:45 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:01:45 Resolved https://github.com/snoopycrimecop/omero-web-zarr.git to commit fbb942d3969018bc55ec3a4d70758cf21084878b
01:01:45 Preparing metadata (setup.py): started
01:01:45 Preparing metadata (setup.py): finished with status 'done'
01:01:45 Collecting omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr (from omero-web-zarr)
01:01:45 Cloning https://github.com/will-moore/omero-cli-zarr.git (to revision register_command) to /tmp/pip-install-6ubt0b4x/omero-cli-zarr_5eee7354931b4fada014b49fdfc5ace5
01:01:45 Running command git clone --filter=blob:none --quiet https://github.com/will-moore/omero-cli-zarr.git /tmp/pip-install-6ubt0b4x/omero-cli-zarr_5eee7354931b4fada014b49fdfc5ace5
01:01:46 Running command git checkout -b register_command --track origin/register_command
01:01:46 Switched to a new branch 'register_command'
01:01:46 branch 'register_command' set up to track 'origin/register_command'.
01:01:46 Resolved https://github.com/will-moore/omero-cli-zarr.git to commit d00ba5ed277c0b3d5f8756a9f08c4e123e813312
01:01:46 Preparing metadata (setup.py): started
01:01:47 Preparing metadata (setup.py): finished with status 'done'
01:01:47 Requirement already satisfied: omero-py>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (5.21.1)
01:01:48 Collecting ome-zarr<0.12.0,>=0.5.0 (from omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:48 Using cached ome_zarr-0.11.1-py3-none-any.whl.metadata (2.9 kB)
01:01:48 Requirement already satisfied: numpy in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.3.3)
01:01:48 Collecting dask (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:48 Using cached dask-2025.9.1-py3-none-any.whl.metadata (3.8 kB)
01:01:48 Collecting zarr<3,>=2.8.1 (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:48 Using cached zarr-2.18.7-py3-none-any.whl.metadata (5.8 kB)
01:01:48 Collecting fsspec!=2021.07.0,!=2023.9.0,>=0.8 (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:48 Using cached fsspec-2025.9.0-py3-none-any.whl.metadata (10 kB)
01:01:49 Collecting aiohttp<4 (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:49 Using cached aiohttp-3.12.15-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (7.7 kB)
01:01:49 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2.32.5)
01:01:49 Collecting scikit-image (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:49 Using cached scikit_image-0.25.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (14 kB)
01:01:49 Collecting toolz (from ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:49 Using cached toolz-1.0.0-py3-none-any.whl.metadata (5.1 kB)
01:01:49 Collecting aiohappyeyeballs>=2.5.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:49 Using cached aiohappyeyeballs-2.6.1-py3-none-any.whl.metadata (5.9 kB)
01:01:49 Collecting aiosignal>=1.4.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:49 Using cached aiosignal-1.4.0-py3-none-any.whl.metadata (3.7 kB)
01:01:50 Collecting attrs>=17.3.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:50 Using cached attrs-25.3.0-py3-none-any.whl.metadata (10 kB)
01:01:50 Collecting frozenlist>=1.1.1 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:50 Using cached frozenlist-1.7.0-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (18 kB)
01:01:50 Collecting multidict<7.0,>=4.5 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:50 Using cached multidict-6.6.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (5.3 kB)
01:01:50 Collecting propcache>=0.2.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:50 Using cached propcache-0.3.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (12 kB)
01:01:51 Collecting yarl<2.0,>=1.17.0 (from aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:51 Using cached yarl-1.20.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (73 kB)
01:01:51 Requirement already satisfied: idna>=2.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from yarl<2.0,>=1.17.0->aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.10)
01:01:51 Collecting asciitree (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:51 Using cached asciitree-0.3.3-py3-none-any.whl
01:01:51 Collecting fasteners (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:51 Using cached fasteners-0.20-py3-none-any.whl.metadata (4.8 kB)
01:01:51 Collecting numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0 (from zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:51 Using cached numcodecs-0.15.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.9 kB)
01:01:51 Collecting deprecated (from numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0->zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:51 Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB)
01:01:51 Collecting typing-extensions>=4.2 (from aiosignal>=1.4.0->aiohttp<4->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:51 Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
01:01:51 Collecting s3fs (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:51 Using cached s3fs-2025.9.0-py3-none-any.whl.metadata (1.4 kB)
01:01:51 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.4.4)
01:01:51 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (1.0.0)
01:01:51 Requirement already satisfied: Pillow>=10.0.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (11.3.0)
01:01:51 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (6.0.2)
01:01:51 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.6.5)
01:01:51 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.2.0)
01:01:51 Collecting click>=8.1 (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:51 Using cached click-8.3.0-py3-none-any.whl.metadata (2.6 kB)
01:01:51 Collecting cloudpickle>=3.0.0 (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:51 Using cached cloudpickle-3.1.1-py3-none-any.whl.metadata (7.1 kB)
01:01:51 Requirement already satisfied: packaging>=20.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (25.0)
01:01:51 Collecting partd>=1.4.0 (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:51 Using cached partd-1.4.2-py3-none-any.whl.metadata (4.6 kB)
01:01:51 Collecting importlib_metadata>=4.13.0 (from dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:51 Using cached importlib_metadata-8.7.0-py3-none-any.whl.metadata (4.8 kB)
01:01:52 Collecting zipp>=3.20 (from importlib_metadata>=4.13.0->dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:52 Using cached zipp-3.23.0-py3-none-any.whl.metadata (3.6 kB)
01:01:52 Collecting locket (from partd>=1.4.0->dask->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:52 Using cached locket-1.0.0-py2.py3-none-any.whl.metadata (2.8 kB)
01:01:52 Collecting wrapt<2,>=1.10 (from deprecated->numcodecs!=0.14.0,!=0.14.1,<0.16,>=0.10.0->zarr<3,>=2.8.1->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:52 Using cached wrapt-1.17.3-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (6.4 kB)
01:01:52 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (3.4.3)
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01:01:52 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr) (2025.8.3)
01:01:52 Collecting aiobotocore<3.0.0,>=2.5.4 (from s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:52 Using cached aiobotocore-2.24.2-py3-none-any.whl.metadata (25 kB)
01:01:52 Collecting aioitertools<1.0.0,>=0.5.1 (from aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
01:01:52 Using cached aioitertools-0.12.0-py3-none-any.whl.metadata (3.8 kB)
01:01:52 Collecting botocore<1.40.19,>=1.40.15 (from aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
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01:01:53 Collecting python-dateutil<3.0.0,>=2.1 (from aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
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01:01:53 Collecting jmespath<2.0.0,>=0.7.1 (from aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
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01:01:53 Collecting six>=1.5 (from python-dateutil<3.0.0,>=2.1->aiobotocore<3.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
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01:01:53 Collecting scipy>=1.11.4 (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
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01:01:54 Collecting tifffile>=2022.8.12 (from scikit-image->ome-zarr<0.12.0,>=0.5.0->omero-cli-zarr@ git+https://github.com/will-moore/omero-cli-zarr.git@register_command#egg=omero-cli-zarr->omero-web-zarr)
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01:01:54 Using cached yarl-1.20.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (348 kB)
01:01:54 Using cached zarr-2.18.7-py3-none-any.whl (211 kB)
01:01:54 Using cached numcodecs-0.15.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (8.9 MB)
01:01:55 Using cached aiohappyeyeballs-2.6.1-py3-none-any.whl (15 kB)
01:01:55 Using cached aiosignal-1.4.0-py3-none-any.whl (7.5 kB)
01:01:55 Using cached attrs-25.3.0-py3-none-any.whl (63 kB)
01:01:55 Using cached frozenlist-1.7.0-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (235 kB)
01:01:55 Using cached fsspec-2025.9.0-py3-none-any.whl (199 kB)
01:01:55 Using cached propcache-0.3.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (213 kB)
01:01:55 Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB)
01:01:55 Using cached dask-2025.9.1-py3-none-any.whl (1.5 MB)
01:01:55 Using cached click-8.3.0-py3-none-any.whl (107 kB)
01:01:55 Using cached cloudpickle-3.1.1-py3-none-any.whl (20 kB)
01:01:55 Using cached importlib_metadata-8.7.0-py3-none-any.whl (27 kB)
01:01:55 Using cached partd-1.4.2-py3-none-any.whl (18 kB)
01:01:55 Using cached toolz-1.0.0-py3-none-any.whl (56 kB)
01:01:55 Using cached zipp-3.23.0-py3-none-any.whl (10 kB)
01:01:55 Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB)
01:01:55 Using cached wrapt-1.17.3-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl (82 kB)
01:01:55 Using cached fasteners-0.20-py3-none-any.whl (18 kB)
01:01:55 Using cached locket-1.0.0-py2.py3-none-any.whl (4.4 kB)
01:01:55 Using cached s3fs-2025.9.0-py3-none-any.whl (30 kB)
01:01:55 Using cached aiobotocore-2.24.2-py3-none-any.whl (85 kB)
01:01:55 Using cached aioitertools-0.12.0-py3-none-any.whl (24 kB)
01:01:55 Using cached botocore-1.40.18-py3-none-any.whl (14.0 MB)
01:01:55 Using cached jmespath-1.0.1-py3-none-any.whl (20 kB)
01:01:55 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl (229 kB)
01:01:55 Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
01:01:55 Using cached scikit_image-0.25.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (14.8 MB)
01:01:56 Using cached imageio-2.37.0-py3-none-any.whl (315 kB)
01:01:56 Using cached lazy_loader-0.4-py3-none-any.whl (12 kB)
01:01:56 Using cached networkx-3.5-py3-none-any.whl (2.0 MB)
01:01:56 Using cached scipy-1.16.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (35.9 MB)
01:01:57 Using cached tifffile-2025.9.20-py3-none-any.whl (230 kB)
01:01:57 Building wheels for collected packages: omero-web-zarr, omero-cli-zarr
01:01:57 DEPRECATION: Building 'omero-web-zarr' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-web-zarr'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:01:57 Building wheel for omero-web-zarr (setup.py): started
01:01:57 Building wheel for omero-web-zarr (setup.py): finished with status 'done'
01:01:57 Created wheel for omero-web-zarr: filename=omero_web_zarr-0.1.2.dev0-py3-none-any.whl size=26589 sha256=12611bf467a22146ba0c454b79e3bba7b5fe64ea9b38d7cc55ebe197d992ed16
01:01:57 Stored in directory: /tmp/pip-ephem-wheel-cache-v0walhn3/wheels/97/92/0c/1f5befedf8dfe340e4f39c35149d27cd63d884ad999f237376
01:01:57 DEPRECATION: Building 'omero-cli-zarr' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-cli-zarr'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:01:57 Building wheel for omero-cli-zarr (setup.py): started
01:01:58 Building wheel for omero-cli-zarr (setup.py): finished with status 'done'
01:01:58 Created wheel for omero-cli-zarr: filename=omero_cli_zarr-0.1.dev558+gd00ba5e-py3-none-any.whl size=37301 sha256=488528228a838d99d0ed81a37d966b53c3ad5dd723222c6c3ec50bae528eec37
01:01:58 Stored in directory: /tmp/pip-ephem-wheel-cache-v0walhn3/wheels/32/e3/da/575f12ddf430a7257c1217df5cf4a5b6c12fbf5d645c6b4d3a
01:01:58 Successfully built omero-web-zarr omero-cli-zarr
01:01:58 Installing collected packages: asciitree, zipp, wrapt, typing-extensions, toolz, tifffile, six, scipy, propcache, networkx, multidict, locket, lazy-loader, jmespath, imageio, fsspec, frozenlist, fasteners, cloudpickle, click, attrs, aioitertools, aiohappyeyeballs, yarl, scikit-image, python-dateutil, partd, importlib_metadata, deprecated, aiosignal, numcodecs, dask, botocore, aiohttp, zarr, aiobotocore, s3fs, ome-zarr, omero-cli-zarr, omero-web-zarr
01:02:08
01:02:08 Successfully installed aiobotocore-2.24.2 aiohappyeyeballs-2.6.1 aiohttp-3.12.15 aioitertools-0.12.0 aiosignal-1.4.0 asciitree-0.3.3 attrs-25.3.0 botocore-1.40.18 click-8.3.0 cloudpickle-3.1.1 dask-2025.9.1 deprecated-1.2.18 fasteners-0.20 frozenlist-1.7.0 fsspec-2025.9.0 imageio-2.37.0 importlib_metadata-8.7.0 jmespath-1.0.1 lazy-loader-0.4 locket-1.0.0 multidict-6.6.4 networkx-3.5 numcodecs-0.15.1 ome-zarr-0.11.1 omero-cli-zarr-0.1.dev558+gd00ba5e omero-web-zarr-0.1.2.dev0 partd-1.4.2 propcache-0.3.2 python-dateutil-2.9.0.post0 s3fs-2025.9.0 scikit-image-0.25.2 scipy-1.16.2 six-1.17.0 tifffile-2025.9.20 toolz-1.0.0 typing-extensions-4.15.0 wrapt-1.17.3 yarl-1.20.1 zarr-2.18.7 zipp-3.23.0
01:02:08 + omero config append omero.web.apps '"omero_web_zarr"'
01:02:10 + omero config append omero.web.open_with '["web_zarr_import", "omero_web_zarr_import", {"supported_objects":["dataset"], "label": "Import OME-Zarr"}]'
01:02:11 + pip install git+https://github.com/BioNGFF/omero-biofilefinder.git@main#egg=omero-biofilefinder
01:02:12 Collecting omero-biofilefinder
01:02:12 Cloning https://github.com/BioNGFF/omero-biofilefinder.git (to revision main) to /tmp/pip-install-ldwwq9qp/omero-biofilefinder_066c7b1a222e4991bc1a662799924309
01:02:12 Running command git clone --filter=blob:none --quiet https://github.com/BioNGFF/omero-biofilefinder.git /tmp/pip-install-ldwwq9qp/omero-biofilefinder_066c7b1a222e4991bc1a662799924309
01:02:13 Resolved https://github.com/BioNGFF/omero-biofilefinder.git to commit e5c9133e7ae55ae643fc2505866b04a1149c28c3
01:02:13 Installing build dependencies: started
01:02:14 Installing build dependencies: finished with status 'done'
01:02:14 Getting requirements to build wheel: started
01:02:14 Getting requirements to build wheel: finished with status 'done'
01:02:14 Preparing metadata (pyproject.toml): started
01:02:14 Preparing metadata (pyproject.toml): finished with status 'done'
01:02:14 Requirement already satisfied: omero-web in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-biofilefinder) (5.29.3.dev0)
01:02:15 Collecting pyarrow (from omero-biofilefinder)
01:02:15 Using cached pyarrow-21.0.0-cp311-cp311-manylinux_2_28_x86_64.whl.metadata (3.3 kB)
01:02:15 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (5.21.1)
01:02:15 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (0.9.28)
01:02:15 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (4.2.24)
01:02:15 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (4.1.0)
01:02:15 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (3.7.0)
01:02:15 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (4.0)
01:02:15 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (6.11.0)
01:02:15 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (23.0.0)
01:02:15 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (0.9.1.dev0)
01:02:15 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (11.3.0)
01:02:15 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (2025.2)
01:02:15 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (3.2.0)
01:02:15 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (25.0)
01:02:15 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (6.5.2)
01:02:15 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web->omero-biofilefinder) (3.9.2)
01:02:15 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web->omero-biofilefinder) (0.5.3)
01:02:15 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (1.4.4)
01:02:15 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (1.0.0)
01:02:15 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (2.3.3)
01:02:15 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (6.0.2)
01:02:15 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (3.6.5)
01:02:15 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (2.32.5)
01:02:15 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web->omero-biofilefinder) (80.9.0)
01:02:15 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web->omero-biofilefinder) (0.45.1)
01:02:15 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (3.4.3)
01:02:15 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (3.10)
01:02:15 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (2.5.0)
01:02:15 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (2025.8.3)
01:02:15 Using cached pyarrow-21.0.0-cp311-cp311-manylinux_2_28_x86_64.whl (42.8 MB)
01:02:15 Building wheels for collected packages: omero-biofilefinder
01:02:15 Building wheel for omero-biofilefinder (pyproject.toml): started
01:02:16 Building wheel for omero-biofilefinder (pyproject.toml): finished with status 'done'
01:02:16 Created wheel for omero-biofilefinder: filename=omero_biofilefinder-0.1.0.dev0-py3-none-any.whl size=6333148 sha256=7ab8af6e7fb731fa22a47861d9f954281ad75eb1786919515568c039c95d79ec
01:02:16 Stored in directory: /tmp/pip-ephem-wheel-cache-_vtdkh1w/wheels/d5/6e/a2/d890a6f8bfe579c8dab0c5138dcc79f4395c0320b24aedff84
01:02:16 Successfully built omero-biofilefinder
01:02:16 Installing collected packages: pyarrow, omero-biofilefinder
01:02:17
01:02:17 Successfully installed omero-biofilefinder-0.1.0.dev0 pyarrow-21.0.0
01:02:18 + omero config append omero.web.apps '"omero_biofilefinder"'
01:02:19 + omero config set omero.web.bff.force_https True
01:02:20 + omero config append omero.web.open_with '["omero_bff", "omero_biofilefinder_openwith", {"supported_objects":["project"], "target": "_blank", "label": "BioFile Finder"}]'
01:02:22 + pip install git+https://github.com/snoopycrimecop/omero-signup.git@merge_ci#egg=omero-signup
01:02:22 Collecting omero-signup
01:02:22 Cloning https://github.com/snoopycrimecop/omero-signup.git (to revision merge_ci) to /tmp/pip-install-uhkkd7sf/omero-signup_b8893815602e4e1bbd8832963df8530e
01:02:22 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-signup.git /tmp/pip-install-uhkkd7sf/omero-signup_b8893815602e4e1bbd8832963df8530e
01:02:23 Running command git checkout -b merge_ci --track origin/merge_ci
01:02:23 Switched to a new branch 'merge_ci'
01:02:23 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:02:23 Resolved https://github.com/snoopycrimecop/omero-signup.git to commit cae7f830994675788ab777f37b183fec7d168870
01:02:23 Preparing metadata (setup.py): started
01:02:23 Preparing metadata (setup.py): finished with status 'done'
01:02:23 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-signup) (5.29.3.dev0)
01:02:23 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (5.21.1)
01:02:23 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (0.9.28)
01:02:23 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.2.24)
01:02:23 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.1.0)
01:02:23 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (3.7.0)
01:02:23 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.0)
01:02:23 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (6.11.0)
01:02:23 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (23.0.0)
01:02:23 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (0.9.1.dev0)
01:02:23 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (11.3.0)
01:02:23 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (2025.2)
01:02:23 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (3.2.0)
01:02:23 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (25.0)
01:02:23 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (6.5.2)
01:02:23 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-signup) (3.9.2)
01:02:23 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-signup) (0.5.3)
01:02:23 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (1.4.4)
01:02:23 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (1.0.0)
01:02:23 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.3.3)
01:02:23 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (6.0.2)
01:02:23 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.6.5)
01:02:23 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.32.5)
01:02:23 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-signup) (80.9.0)
01:02:23 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-signup) (0.45.1)
01:02:23 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.4.3)
01:02:23 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.10)
01:02:23 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.5.0)
01:02:23 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2025.8.3)
01:02:23 Building wheels for collected packages: omero-signup
01:02:23 DEPRECATION: Building 'omero-signup' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-signup'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:02:23 Building wheel for omero-signup (setup.py): started
01:02:24 Building wheel for omero-signup (setup.py): finished with status 'done'
01:02:24 Created wheel for omero-signup: filename=omero_signup-0.3.4.dev0-py3-none-any.whl size=24419 sha256=aad43a8d5bd94a5cdc87a95ab21f7262eeb53de32367b0b1f87b6a9335b24182
01:02:24 Stored in directory: /tmp/pip-ephem-wheel-cache-hhsloao3/wheels/47/cb/fe/b950fb8aeb3188c590a5e045d574b1614eac317e43fa840236
01:02:24 Successfully built omero-signup
01:02:24 Installing collected packages: omero-signup
01:02:24 Successfully installed omero-signup-0.3.4.dev0
01:02:24 + omero config append omero.web.apps '"omero_signup"'
01:02:25 + omero config set omero.web.signup.admin.user root
01:02:27 + omero config set omero.web.signup.admin.password omero
01:02:28 + omero config set omero.web.signup.group.name signup-test
01:02:30 + omero config set omero.web.signup.email.enabled True
01:02:31 + pip install git+https://github.com/snoopycrimecop/omero-virtual-microscope.git@merge_ci#egg=omero-virtual-microscope
01:02:31 Collecting omero-virtual-microscope
01:02:31 Cloning https://github.com/snoopycrimecop/omero-virtual-microscope.git (to revision merge_ci) to /tmp/pip-install-gd5f7qv0/omero-virtual-microscope_d575afa4e2ae4f1e9e696678806dbe6f
01:02:31 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-virtual-microscope.git /tmp/pip-install-gd5f7qv0/omero-virtual-microscope_d575afa4e2ae4f1e9e696678806dbe6f
01:02:32 Running command git checkout -b merge_ci --track origin/merge_ci
01:02:32 Switched to a new branch 'merge_ci'
01:02:32 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:02:32 Resolved https://github.com/snoopycrimecop/omero-virtual-microscope.git to commit 6b4fd1a6bd9351cc6d14d64a66d42738ec81384c
01:02:32 Preparing metadata (setup.py): started
01:02:33 Preparing metadata (setup.py): finished with status 'done'
01:02:33 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-virtual-microscope) (5.29.3.dev0)
01:02:33 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (5.21.1)
01:02:33 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (0.9.28)
01:02:33 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.2.24)
01:02:33 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.1.0)
01:02:33 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (3.7.0)
01:02:33 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.0)
01:02:33 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (6.11.0)
01:02:33 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (23.0.0)
01:02:33 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (0.9.1.dev0)
01:02:33 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (11.3.0)
01:02:33 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (2025.2)
01:02:33 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (3.2.0)
01:02:33 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (25.0)
01:02:33 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (6.5.2)
01:02:33 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-virtual-microscope) (3.9.2)
01:02:33 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-virtual-microscope) (0.5.3)
01:02:33 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (1.4.4)
01:02:33 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (1.0.0)
01:02:33 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.3.3)
01:02:33 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (6.0.2)
01:02:33 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.6.5)
01:02:33 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.32.5)
01:02:33 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-virtual-microscope) (80.9.0)
01:02:33 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-virtual-microscope) (0.45.1)
01:02:33 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.4.3)
01:02:33 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.10)
01:02:33 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.5.0)
01:02:33 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2025.8.3)
01:02:33 Building wheels for collected packages: omero-virtual-microscope
01:02:33 DEPRECATION: Building 'omero-virtual-microscope' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-virtual-microscope'. Discussion can be found at https://github.com/pypa/pip/issues/6334
01:02:33 Building wheel for omero-virtual-microscope (setup.py): started
01:02:33 Building wheel for omero-virtual-microscope (setup.py): finished with status 'done'
01:02:33 Created wheel for omero-virtual-microscope: filename=omero_virtual_microscope-1.1.2.dev0-py3-none-any.whl size=17375 sha256=d1161a4403811f1d399460bccebec0f0f1053d7afb05012d7299740cf0ceaa9a
01:02:33 Stored in directory: /tmp/pip-ephem-wheel-cache-uiy_g07a/wheels/0f/38/be/3c5aedfd619e2ce9f2ac800e8ad92e0b65117ebbf35f5b5bf6
01:02:33 Successfully built omero-virtual-microscope
01:02:33 Installing collected packages: omero-virtual-microscope
01:02:33 Successfully installed omero-virtual-microscope-1.1.2.dev0
01:02:33 + omero config append omero.web.apps '"virtualmicroscope"'
01:02:34 + omero config set omero.web.login_redirect '{"redirect": ["webindex"], "viewname": "webindex_custom"}'
01:02:36 + omero config append omero.web.apps '"corsheaders"'
01:02:37 + omero config append omero.web.middleware '{"index": 0.5, "class": "corsheaders.middleware.CorsMiddleware"}'
01:02:39 + omero config append omero.web.middleware '{"index": 10, "class": "corsheaders.middleware.CorsPostCsrfMiddleware"}'
01:02:40 + omero config set omero.web.cors_origin_allow_all True
01:02:42 + omero config append omero.web.csrf_trusted_origins '"https://merge-ci.openmicroscopy.org"'
01:02:43 + omero config set omero.web.sharing.opengraph '{"omero":"Open Microscopy"}'
01:02:45 + omero config set omero.web.sharing.twitter '{"omero":"@openmicroscopy"}'
01:02:46 + omero config set omero.web.public.enabled true
01:02:47 + omero config set omero.web.public.user public
01:02:49 + omero config set omero.web.public.password public
01:02:50 + omero config set omero.web.public.url_filter '^/'
01:02:52 + omero config set omero.web.feedback.comment.enabled false
01:02:53 + omero config set omero.web.feedback.error.enabled false
01:02:54 + BUILD_ID=DONT_KILL_ME
01:02:54 + omero web start
01:02:57
01:02:57 733 static files copied to '/home/omero/static/web', 2 post-processed.
01:02:58 Clearing expired sessions. This may take some time... [OK]
01:02:59 Starting OMERO.web... [OK]
01:02:59 + omero web diagnostics
01:03:00
01:03:00 ================================================================================
01:03:00 OMERO Diagnostics (web)
01:03:00 ================================================================================
01:03:00
01:03:00 OMERO.web status... [RUNNING] (PID 6825)
01:03:00 Django version: 4.2.24
01:03:00
01:03:00 Log dir: /home/omero/workspace/OMERO-web/OMERO.web/var/log exists
01:03:00 Log file : OMEROweb.log 2.5 KB
01:03:00 + deactivate
01:03:00 + '[' -n /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
01:03:00 + PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:03:00 + export PATH
01:03:00 + unset _OLD_VIRTUAL_PATH
01:03:00 + '[' -n '' ']'
01:03:00 + hash -r
01:03:00 + '[' -n '' ']'
01:03:00 + unset VIRTUAL_ENV
01:03:00 + unset VIRTUAL_ENV_PROMPT
01:03:00 + '[' '!' '' = nondestructive ']'
01:03:00 + unset -f deactivate
01:03:01 Finished: SUCCESS
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