Skipping 144 KB..
Full LogTestTestTestTestTestTestTestTestTestTestTestTestTest
2024-11-26 00:40:22,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2024-11-26 00:40:22,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:40:22,472 [ scc.repo] DEBUG - PR 18 jburel 'default size z value'
2024-11-26 00:40:22,472 [ scc.repo] DEBUG ## Branches found:
2024-11-26 00:40:22,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-11-26 00:40:22,472 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:40:22,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:22,478 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-26 00:40:22,482 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-26 00:40:22,483 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-26 00:40:22,488 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-26 00:40:22,497 [ scc.git] DEBUG Updating e5b3ca3..3b6c05a
2024-11-26 00:40:23,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls/30 HTTP/1.1" 200 None
2024-11-26 00:40:23,154 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2024-11-26 00:40:23,470 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2024-11-26 00:40:23,470 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD
2024-11-26 00:40:23,474 [ scc.git] DEBUG ## Unique users: []
2024-11-26 00:40:23,474 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:40:23,475 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:23,480 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2024-11-26 00:40:23,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:23,490 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2024-11-26 00:40:23,499 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2024-11-26 00:40:23,499 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-26 00:40:23,501 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++
2024-11-26 00:40:23,501 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-11-26 00:40:23,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:40:23,645 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-26 00:40:23,685 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:40:23,685 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:23,690 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-26 00:40:23,727 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-26 00:40:23,733 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe7c9bb6d90> has no local changes
2024-11-26 00:40:23,733 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-fpbioimage
Updating e5b3ca3..3b6c05a
Previously merged:
- PR 30 jburel 'Build'
Merged PRs:
- PR 18 jburel 'default size z value'
Generated by OMERO-plugins-push#258 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/)'
2024-11-26 00:40:23,741 [ scc.git] DEBUG [detached HEAD 1a89435] merge master -Dorg -Ssuccess-only
2024-11-26 00:40:23,741 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:40:23,741 [ scc.repo] DEBUG ## PRs found:
2024-11-26 00:40:24,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2024-11-26 00:40:24,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/112 HTTP/1.1" 200 None
2024-11-26 00:40:25,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/54df1054c2422d028a55d54c0a412c2568656a42 HTTP/1.1" 200 None
2024-11-26 00:40:25,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/54df1054c2422d028a55d54c0a412c2568656a42/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:40:26,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/54df1054c2422d028a55d54c0a412c2568656a42/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-26 00:40:26,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/54df1054c2422d028a55d54c0a412c2568656a42 HTTP/1.1" 200 None
2024-11-26 00:40:26,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/54df1054c2422d028a55d54c0a412c2568656a42?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:40:26,954 [ scc.repo] DEBUG - PR 112 jburel 'Build'
2024-11-26 00:40:26,954 [ scc.repo] DEBUG ## Branches found:
2024-11-26 00:40:26,954 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-11-26 00:40:26,954 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:40:26,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:26,961 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-26 00:40:26,966 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-26 00:40:26,966 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-26 00:40:26,971 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-26 00:40:26,976 [ scc.git] DEBUG Already up to date.
2024-11-26 00:40:26,976 [ scc.git] DEBUG Calling 'git fetch origin pull/112/head'
2024-11-26 00:40:27,632 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-11-26 00:40:27,633 [ scc.git] DEBUG * branch refs/pull/112/head -> FETCH_HEAD
2024-11-26 00:40:27,637 [ scc.git] DEBUG ## Unique users: []
2024-11-26 00:40:27,637 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:40:27,637 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:27,643 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...54df1054c2422d028a55d54c0a412c2568656a42'
2024-11-26 00:40:27,649 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:27,653 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 112 (Build) 54df1054c2422d028a55d54c0a412c2568656a42'
2024-11-26 00:40:27,750 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-26 00:40:27,752 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-11-26 00:40:27,752 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-11-26 00:40:27,752 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++
2024-11-26 00:40:27,753 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-)
2024-11-26 00:40:27,753 [ scc.git] DEBUG create mode 100755 .omeroci/app-build
2024-11-26 00:40:27,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:40:27,897 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-26 00:40:27,938 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:40:27,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:27,942 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-26 00:40:27,981 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-26 00:40:27,987 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe7c9bb8eb0> has no local changes
2024-11-26 00:40:27,987 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 112 jburel 'Build'
Generated by OMERO-plugins-push#258 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/)'
2024-11-26 00:40:27,995 [ scc.git] DEBUG [detached HEAD 6db9f87] merge master -Dorg -Ssuccess-only
2024-11-26 00:40:27,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:40:27,996 [ scc.repo] DEBUG ## PRs found:
2024-11-26 00:40:28,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2024-11-26 00:40:28,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None
2024-11-26 00:40:29,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None
2024-11-26 00:40:29,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/496 HTTP/1.1" 200 None
2024-11-26 00:40:30,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/496/comments HTTP/1.1" 200 None
2024-11-26 00:40:30,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2be10ae76782b80eec916a57ba8656bf0a476b24 HTTP/1.1" 200 None
2024-11-26 00:40:31,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2be10ae76782b80eec916a57ba8656bf0a476b24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:40:31,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2be10ae76782b80eec916a57ba8656bf0a476b24/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-26 00:40:32,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2be10ae76782b80eec916a57ba8656bf0a476b24 HTTP/1.1" 200 None
2024-11-26 00:40:32,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/2be10ae76782b80eec916a57ba8656bf0a476b24?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:40:32,703 [ scc.repo] DEBUG - PR 496 will-moore 'Add changelog 0.15.0'
2024-11-26 00:40:33,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2024-11-26 00:40:33,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2024-11-26 00:40:34,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-11-26 00:40:34,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:40:35,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-26 00:40:35,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-11-26 00:40:35,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:40:35,999 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2024-11-26 00:40:36,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2024-11-26 00:40:36,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2024-11-26 00:40:37,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-11-26 00:40:37,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:40:38,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-26 00:40:38,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-11-26 00:40:39,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:40:39,391 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2024-11-26 00:40:39,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2024-11-26 00:40:40,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2024-11-26 00:40:40,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-11-26 00:40:41,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:40:41,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-11-26 00:40:42,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:40:42,063 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2024-11-26 00:40:42,064 [ scc.repo] DEBUG ## Branches found:
2024-11-26 00:40:42,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-11-26 00:40:42,064 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:40:42,064 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:42,070 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-26 00:40:42,074 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-26 00:40:42,075 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-26 00:40:42,080 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-26 00:40:42,096 [ scc.git] DEBUG Updating 387b490..6f1597f
2024-11-26 00:40:42,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/488 HTTP/1.1" 200 None
2024-11-26 00:40:42,733 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2024-11-26 00:40:43,300 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-11-26 00:40:43,301 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2024-11-26 00:40:43,305 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2024-11-26 00:40:44,458 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-11-26 00:40:44,458 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2024-11-26 00:40:44,463 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2024-11-26 00:40:44,803 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-11-26 00:40:44,803 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2024-11-26 00:40:44,808 [ scc.git] DEBUG Calling 'git fetch origin pull/496/head'
2024-11-26 00:40:45,094 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-11-26 00:40:45,095 [ scc.git] DEBUG * branch refs/pull/496/head -> FETCH_HEAD
2024-11-26 00:40:45,099 [ scc.git] DEBUG ## Unique users: []
2024-11-26 00:40:45,099 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:40:45,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:45,105 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-11-26 00:40:45,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:45,117 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-11-26 00:40:45,195 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2024-11-26 00:40:45,196 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-26 00:40:45,200 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2024-11-26 00:40:45,200 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2024-11-26 00:40:45,200 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2024-11-26 00:40:45,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:40:45,340 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2024-11-26 00:40:45,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:45,354 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2024-11-26 00:40:45,585 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2024-11-26 00:40:45,585 [ scc.git] DEBUG Auto-merging src/app/context.js
2024-11-26 00:40:45,585 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2024-11-26 00:40:45,585 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2024-11-26 00:40:45,634 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-26 00:40:45,638 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2024-11-26 00:40:45,638 [ scc.git] DEBUG src/app/context.js | 6 +-
2024-11-26 00:40:45,638 [ scc.git] DEBUG src/app/header.html | 5 +
2024-11-26 00:40:45,639 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2024-11-26 00:40:45,639 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2024-11-26 00:40:45,639 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2024-11-26 00:40:45,639 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2024-11-26 00:40:45,639 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2024-11-26 00:40:45,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:40:45,773 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2024-11-26 00:40:45,781 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:45,786 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2024-11-26 00:40:45,899 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2024-11-26 00:40:45,960 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-26 00:40:45,963 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2024-11-26 00:40:45,963 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2024-11-26 00:40:45,963 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2024-11-26 00:40:46,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:40:46,170 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2be10ae76782b80eec916a57ba8656bf0a476b24'
2024-11-26 00:40:46,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:46,185 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 496 (Add changelog 0.15.0) 2be10ae76782b80eec916a57ba8656bf0a476b24'
2024-11-26 00:40:46,204 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-26 00:40:46,207 [ scc.git] DEBUG CHANGELOG.md | 9 +++++++++
2024-11-26 00:40:46,207 [ scc.git] DEBUG 1 file changed, 9 insertions(+)
2024-11-26 00:40:46,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:40:46,554 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-26 00:40:46,595 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:40:46,595 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:46,600 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-26 00:40:46,639 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-26 00:40:46,645 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe7c8318580> has no local changes
2024-11-26 00:40:46,645 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Updating 387b490..6f1597f
Previously merged:
- PR 488 will-moore 'Mobile layout'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 496 will-moore 'Add changelog 0.15.0'
Generated by OMERO-plugins-push#258 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/)'
2024-11-26 00:40:46,653 [ scc.git] DEBUG [detached HEAD 9f25c0c] merge master -Dorg -Ssuccess-only
2024-11-26 00:40:46,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:40:46,654 [ scc.repo] DEBUG ## PRs found:
2024-11-26 00:40:47,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2024-11-26 00:40:47,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/93 HTTP/1.1" 200 None
2024-11-26 00:40:47,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/93/comments HTTP/1.1" 200 None
2024-11-26 00:40:48,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/4585fcd2bf424623bba63f97686c965a9e90782c HTTP/1.1" 200 None
2024-11-26 00:40:49,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/4585fcd2bf424623bba63f97686c965a9e90782c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:40:49,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/4585fcd2bf424623bba63f97686c965a9e90782c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-26 00:40:50,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/4585fcd2bf424623bba63f97686c965a9e90782c HTTP/1.1" 200 None
2024-11-26 00:40:50,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/4585fcd2bf424623bba63f97686c965a9e90782c?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:40:50,597 [ scc.repo] DEBUG - PR 93 will-moore 'changelog 0.5.3'
2024-11-26 00:40:51,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2024-11-26 00:40:51,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2024-11-26 00:40:52,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-11-26 00:40:52,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:40:53,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-11-26 00:40:53,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:40:53,415 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2024-11-26 00:40:53,415 [ scc.repo] DEBUG ## Branches found:
2024-11-26 00:40:53,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-11-26 00:40:53,415 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:40:53,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:53,421 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-26 00:40:53,425 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-26 00:40:53,425 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-26 00:40:53,431 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-26 00:40:53,436 [ scc.git] DEBUG Already up to date.
2024-11-26 00:40:53,436 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2024-11-26 00:40:53,740 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2024-11-26 00:40:53,740 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2024-11-26 00:40:53,744 [ scc.git] DEBUG Calling 'git fetch origin pull/93/head'
2024-11-26 00:40:54,414 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2024-11-26 00:40:54,415 [ scc.git] DEBUG * branch refs/pull/93/head -> FETCH_HEAD
2024-11-26 00:40:54,417 [ scc.git] DEBUG ## Unique users: []
2024-11-26 00:40:54,417 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:40:54,417 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:54,423 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-11-26 00:40:54,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:54,435 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-11-26 00:40:54,446 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-26 00:40:54,449 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2024-11-26 00:40:54,449 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2024-11-26 00:40:54,449 [ scc.git] DEBUG requirements.txt | 2 +-
2024-11-26 00:40:54,449 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2024-11-26 00:40:54,449 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2024-11-26 00:40:54,449 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2024-11-26 00:40:54,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:40:54,582 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4585fcd2bf424623bba63f97686c965a9e90782c'
2024-11-26 00:40:54,589 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:54,593 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 93 (changelog 0.5.3) 4585fcd2bf424623bba63f97686c965a9e90782c'
2024-11-26 00:40:54,641 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-26 00:40:54,643 [ scc.git] DEBUG CHANGELOG.md | 12 ++++++++++++
2024-11-26 00:40:54,643 [ scc.git] DEBUG 1 file changed, 12 insertions(+)
2024-11-26 00:40:55,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:40:55,001 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-26 00:40:55,042 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:40:55,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:40:55,047 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-26 00:40:55,086 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-26 00:40:55,094 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe7c83296a0> has no local changes
2024-11-26 00:40:55,094 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 93 will-moore 'changelog 0.5.3'
Generated by OMERO-plugins-push#258 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/)'
2024-11-26 00:40:55,102 [ scc.git] DEBUG [detached HEAD c75c6fb] merge master -Dorg -Ssuccess-only
2024-11-26 00:40:55,103 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:40:55,103 [ scc.repo] DEBUG ## PRs found:
2024-11-26 00:40:55,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2024-11-26 00:40:56,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/89 HTTP/1.1" 200 None
2024-11-26 00:40:56,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175 HTTP/1.1" 200 None
2024-11-26 00:40:57,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:40:57,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-26 00:40:58,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175 HTTP/1.1" 200 None
2024-11-26 00:40:58,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/dfc227486da13c78bc278fc534e59b40cbc97175?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:40:58,431 [ scc.repo] DEBUG - PR 89 jburel 'Build'
2024-11-26 00:40:58,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2024-11-26 00:40:59,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2024-11-26 00:40:59,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-11-26 00:41:00,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:41:00,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-11-26 00:41:01,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:41:01,238 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-11-26 00:41:01,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2024-11-26 00:41:02,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2024-11-26 00:41:02,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-11-26 00:41:03,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:41:03,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-11-26 00:41:04,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:41:04,079 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-11-26 00:41:04,079 [ scc.repo] DEBUG ## Branches found:
2024-11-26 00:41:04,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-11-26 00:41:04,079 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:04,079 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:04,087 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-26 00:41:04,095 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-26 00:41:04,095 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-26 00:41:04,101 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-26 00:41:04,107 [ scc.git] DEBUG Already up to date.
2024-11-26 00:41:04,107 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2024-11-26 00:41:05,039 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-11-26 00:41:05,039 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2024-11-26 00:41:05,044 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2024-11-26 00:41:05,563 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-11-26 00:41:05,563 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2024-11-26 00:41:05,568 [ scc.git] DEBUG Calling 'git fetch origin pull/89/head'
2024-11-26 00:41:06,191 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-11-26 00:41:06,192 [ scc.git] DEBUG * branch refs/pull/89/head -> FETCH_HEAD
2024-11-26 00:41:06,197 [ scc.git] DEBUG ## Unique users: []
2024-11-26 00:41:06,197 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:06,197 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:06,202 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-11-26 00:41:06,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:06,213 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-11-26 00:41:06,525 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2024-11-26 00:41:06,525 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2024-11-26 00:41:06,525 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-11-26 00:41:06,525 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-11-26 00:41:06,525 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-26 00:41:06,526 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-26 00:41:06,532 [ scc.git] DEBUG Calling 'git reset --hard fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-11-26 00:41:06,538 [ scc.git] DEBUG HEAD is now at fc20959 Bump version: 0.13.0 → 0.13.1.dev0
2024-11-26 00:41:06,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:41:06,669 [ scc.git] DEBUG Calling 'git merge-base fc2095901f5dfd24ecd29a99092283f136de04d5 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-11-26 00:41:06,677 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-11-26 00:41:06,809 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#258](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/cli.py
- src/omero_metadata/populate.py
--conflicts
2024-11-26 00:41:06,815 [ scc.config] DEBUG Found github.token
2024-11-26 00:41:06,815 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2024-11-26 00:41:06,815 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2024-11-26 00:41:06,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:06,827 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2024-11-26 00:41:06,848 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-11-26 00:41:06,848 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-11-26 00:41:06,848 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2024-11-26 00:41:06,848 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-26 00:41:06,848 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-26 00:41:06,853 [ scc.git] DEBUG Calling 'git reset --hard fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-11-26 00:41:06,860 [ scc.git] DEBUG HEAD is now at fc20959 Bump version: 0.13.0 → 0.13.1.dev0
2024-11-26 00:41:07,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:41:07,069 [ scc.git] DEBUG Calling 'git merge-base fc2095901f5dfd24ecd29a99092283f136de04d5 78e55539b68e351ed5ef202854718b49a37729a7'
2024-11-26 00:41:07,077 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-11-26 00:41:07,082 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#258](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2024-11-26 00:41:07,087 [ scc.config] DEBUG Found github.token
2024-11-26 00:41:07,087 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2024-11-26 00:41:07,087 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dfc227486da13c78bc278fc534e59b40cbc97175'
2024-11-26 00:41:07,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:07,098 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 89 (Build) dfc227486da13c78bc278fc534e59b40cbc97175'
2024-11-26 00:41:07,126 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-26 00:41:07,128 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-11-26 00:41:07,128 [ scc.git] DEBUG 1 file changed, 7 insertions(+), 5 deletions(-)
2024-11-26 00:41:07,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:41:07,453 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-26 00:41:07,493 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:07,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:07,498 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-26 00:41:07,535 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-26 00:41:07,541 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe7c82d0700> has no local changes
2024-11-26 00:41:07,541 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Already up to date.
Merged PRs:
- PR 89 jburel 'Build'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#258 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/)'
2024-11-26 00:41:07,549 [ scc.git] DEBUG [detached HEAD cc9c1a3] merge master -Dorg -Ssuccess-only
2024-11-26 00:41:07,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:41:07,549 [ scc.repo] DEBUG ## PRs found:
2024-11-26 00:41:08,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2024-11-26 00:41:08,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2024-11-26 00:41:08,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2024-11-26 00:41:09,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2024-11-26 00:41:09,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2024-11-26 00:41:10,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2024-11-26 00:41:10,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2024-11-26 00:41:10,934 [ scc.repo] DEBUG ## Branches found:
2024-11-26 00:41:10,934 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-11-26 00:41:10,934 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:10,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:10,940 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-26 00:41:10,945 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-26 00:41:10,945 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-26 00:41:10,952 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-26 00:41:10,964 [ scc.git] DEBUG Updating 5d441c2..fb5ae86
2024-11-26 00:41:11,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/133 HTTP/1.1" 200 None
2024-11-26 00:41:12,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/129 HTTP/1.1" 200 None
2024-11-26 00:41:12,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/131 HTTP/1.1" 200 None
2024-11-26 00:41:13,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/128 HTTP/1.1" 200 None
2024-11-26 00:41:13,546 [ scc.git] DEBUG ## Unique users: []
2024-11-26 00:41:13,546 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:13,546 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:13,552 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-26 00:41:13,594 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:13,594 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:13,600 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-26 00:41:13,642 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-26 00:41:13,650 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe7c82d05e0> has no local changes
2024-11-26 00:41:13,650 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Updating 5d441c2..fb5ae86
Previously merged:
- PR 133 jburel 'Build'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
Generated by OMERO-plugins-push#258 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/)'
2024-11-26 00:41:13,659 [ scc.git] DEBUG [detached HEAD e624fd8] merge master -Dorg -Ssuccess-only
2024-11-26 00:41:13,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:41:13,660 [ scc.repo] DEBUG ## PRs found:
2024-11-26 00:41:14,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2024-11-26 00:41:14,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/15 HTTP/1.1" 200 None
2024-11-26 00:41:14,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332 HTTP/1.1" 200 None
2024-11-26 00:41:15,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:41:15,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-26 00:41:16,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None
2024-11-26 00:41:16,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-11-26 00:41:17,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:41:17,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-11-26 00:41:18,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:41:18,331 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel'
2024-11-26 00:41:18,331 [ scc.repo] DEBUG ## Branches found:
2024-11-26 00:41:18,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-11-26 00:41:18,331 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:18,332 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:18,338 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-26 00:41:18,343 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-26 00:41:18,343 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-26 00:41:18,348 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-26 00:41:18,353 [ scc.git] DEBUG Already up to date.
2024-11-26 00:41:18,353 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-11-26 00:41:18,671 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2024-11-26 00:41:18,671 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-11-26 00:41:18,676 [ scc.git] DEBUG ## Unique users: []
2024-11-26 00:41:18,676 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:18,676 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:18,681 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-11-26 00:41:18,686 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:18,691 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-11-26 00:41:18,699 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-26 00:41:18,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:41:18,838 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-26 00:41:18,879 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:18,879 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:18,884 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-26 00:41:18,923 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-26 00:41:18,930 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe7c8336b50> has no local changes
2024-11-26 00:41:18,930 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Excluded PRs:
- PR 15 jburel 'Build' (status: failure)
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Generated by OMERO-plugins-push#258 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/)'
2024-11-26 00:41:18,939 [ scc.git] DEBUG [detached HEAD a5f2767] merge master -Dorg -Ssuccess-only
2024-11-26 00:41:18,939 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:41:18,940 [ scc.repo] DEBUG ## PRs found:
2024-11-26 00:41:19,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2024-11-26 00:41:19,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/29 HTTP/1.1" 200 None
2024-11-26 00:41:20,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-11-26 00:41:20,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:41:21,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-11-26 00:41:21,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24?per_page=1 HTTP/1.1" 200 None
2024-11-26 00:41:22,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-11-26 00:41:22,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/status HTTP/1.1" 200 None
2024-11-26 00:41:22,693 [ scc.repo] DEBUG - PR 29 jburel 'Build'
2024-11-26 00:41:23,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None
2024-11-26 00:41:23,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None
2024-11-26 00:41:24,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None
2024-11-26 00:41:24,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-11-26 00:41:25,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:41:25,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-11-26 00:41:26,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:41:26,176 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-11-26 00:41:26,176 [ scc.repo] DEBUG ## Branches found:
2024-11-26 00:41:26,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-11-26 00:41:26,176 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:26,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:26,183 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-26 00:41:26,189 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-26 00:41:26,189 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-26 00:41:26,196 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-26 00:41:26,203 [ scc.git] DEBUG Already up to date.
2024-11-26 00:41:26,203 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head'
2024-11-26 00:41:26,720 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-11-26 00:41:26,721 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD
2024-11-26 00:41:26,725 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head'
2024-11-26 00:41:27,145 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-11-26 00:41:27,145 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD
2024-11-26 00:41:27,150 [ scc.git] DEBUG ## Unique users: []
2024-11-26 00:41:27,150 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:27,150 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:27,156 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61'
2024-11-26 00:41:27,162 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:27,166 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61'
2024-11-26 00:41:27,176 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py
2024-11-26 00:41:27,177 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-26 00:41:27,179 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++
2024-11-26 00:41:27,179 [ scc.git] DEBUG 1 file changed, 33 insertions(+)
2024-11-26 00:41:27,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:41:27,334 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24'
2024-11-26 00:41:27,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:27,346 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Build) 92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24'
2024-11-26 00:41:27,424 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-26 00:41:27,426 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-11-26 00:41:27,426 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-11-26 00:41:27,426 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 6 deletions(-)
2024-11-26 00:41:27,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:41:27,724 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-26 00:41:27,762 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:27,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:27,768 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-26 00:41:27,804 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-26 00:41:27,810 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe7c828a940> has no local changes
2024-11-26 00:41:27,810 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
- PR 29 jburel 'Build'
Generated by OMERO-plugins-push#258 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/)'
2024-11-26 00:41:27,818 [ scc.git] DEBUG [detached HEAD 1c1f0f1] merge master -Dorg -Ssuccess-only
2024-11-26 00:41:27,818 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:41:27,819 [ scc.repo] DEBUG ## PRs found:
2024-11-26 00:41:28,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2024-11-26 00:41:28,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/21 HTTP/1.1" 200 None
2024-11-26 00:41:29,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None
2024-11-26 00:41:29,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:41:30,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-26 00:41:30,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None
2024-11-26 00:41:31,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:41:31,198 [ scc.repo] DEBUG - PR 21 jburel 'Build'
2024-11-26 00:41:31,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2024-11-26 00:41:32,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2024-11-26 00:41:32,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-11-26 00:41:33,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:41:33,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-11-26 00:41:34,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:41:34,129 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2024-11-26 00:41:34,129 [ scc.repo] DEBUG ## Branches found:
2024-11-26 00:41:34,129 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-11-26 00:41:34,129 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:34,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:34,136 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-26 00:41:34,140 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-26 00:41:34,140 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-26 00:41:34,145 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-26 00:41:34,151 [ scc.git] DEBUG Already up to date.
2024-11-26 00:41:34,151 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-11-26 00:41:34,473 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-11-26 00:41:34,474 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-11-26 00:41:34,479 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head'
2024-11-26 00:41:34,877 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-11-26 00:41:34,877 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD
2024-11-26 00:41:34,882 [ scc.git] DEBUG ## Unique users: []
2024-11-26 00:41:34,882 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:34,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:34,888 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-11-26 00:41:34,894 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:34,898 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-11-26 00:41:34,937 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2024-11-26 00:41:34,937 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2024-11-26 00:41:34,937 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2024-11-26 00:41:34,937 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2024-11-26 00:41:34,937 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2024-11-26 00:41:34,937 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2024-11-26 00:41:34,937 [ scc.git] DEBUG Auto-merging setup.py
2024-11-26 00:41:34,937 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2024-11-26 00:41:34,937 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-26 00:41:34,938 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-26 00:41:34,945 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319'
2024-11-26 00:41:34,952 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0
2024-11-26 00:41:35,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:41:35,087 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-11-26 00:41:35,094 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319'
2024-11-26 00:41:35,100 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#258](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/consoleText) for more details.
Possible conflicts:
- Upstream changes
- setup.py
- omero_signup/signup_settings.py
- omero_signup/urls.py
- omero_signup/views.py
--conflicts
2024-11-26 00:41:35,105 [ scc.config] DEBUG Found github.token
2024-11-26 00:41:35,105 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2024-11-26 00:41:35,106 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8cd79097b8e36aef506d1589aa1bc281a0fc1b1'
2024-11-26 00:41:35,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:35,117 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Build) d8cd79097b8e36aef506d1589aa1bc281a0fc1b1'
2024-11-26 00:41:35,128 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-26 00:41:35,130 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-11-26 00:41:35,130 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-11-26 00:41:35,130 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++
2024-11-26 00:41:35,130 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-)
2024-11-26 00:41:35,130 [ scc.git] DEBUG create mode 100755 .omeroci/app-build
2024-11-26 00:41:35,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:41:35,474 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-26 00:41:35,515 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:35,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:35,521 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-26 00:41:35,561 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-26 00:41:35,567 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe7c82e2bb0> has no local changes
2024-11-26 00:41:35,567 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 21 jburel 'Build'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#258 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/)'
2024-11-26 00:41:35,576 [ scc.git] DEBUG [detached HEAD b40ff5d] merge master -Dorg -Ssuccess-only
2024-11-26 00:41:35,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:41:35,577 [ scc.repo] DEBUG ## PRs found:
2024-11-26 00:41:35,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2024-11-26 00:41:36,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2024-11-26 00:41:36,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2024-11-26 00:41:37,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-11-26 00:41:37,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:41:38,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-11-26 00:41:38,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:41:38,788 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-11-26 00:41:38,788 [ scc.repo] DEBUG ## Branches found:
2024-11-26 00:41:38,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-11-26 00:41:38,789 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:38,789 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:38,795 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-26 00:41:38,800 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-26 00:41:38,800 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-26 00:41:38,805 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-26 00:41:38,810 [ scc.git] DEBUG Already up to date.
2024-11-26 00:41:38,811 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2024-11-26 00:41:39,119 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2024-11-26 00:41:39,119 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2024-11-26 00:41:39,123 [ scc.git] DEBUG ## Unique users: []
2024-11-26 00:41:39,124 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:39,124 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:39,129 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2024-11-26 00:41:39,136 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:39,140 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2024-11-26 00:41:39,284 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-26 00:41:39,287 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2024-11-26 00:41:39,288 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2024-11-26 00:41:39,288 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2024-11-26 00:41:39,288 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2024-11-26 00:41:39,288 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2024-11-26 00:41:39,288 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2024-11-26 00:41:39,288 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2024-11-26 00:41:39,288 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2024-11-26 00:41:39,288 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2024-11-26 00:41:39,288 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2024-11-26 00:41:39,288 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2024-11-26 00:41:39,288 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2024-11-26 00:41:39,288 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2024-11-26 00:41:39,290 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2024-11-26 00:41:39,290 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2024-11-26 00:41:39,290 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2024-11-26 00:41:39,290 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2024-11-26 00:41:39,290 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2024-11-26 00:41:39,290 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2024-11-26 00:41:39,290 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2024-11-26 00:41:39,290 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2024-11-26 00:41:39,290 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2024-11-26 00:41:39,290 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2024-11-26 00:41:39,290 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2024-11-26 00:41:39,290 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2024-11-26 00:41:39,290 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2024-11-26 00:41:39,291 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2024-11-26 00:41:39,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:41:39,426 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-26 00:41:39,468 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:39,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:39,474 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-26 00:41:39,513 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-26 00:41:39,519 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe7c829bb80> has no local changes
2024-11-26 00:41:39,520 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Generated by OMERO-plugins-push#258 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/)'
2024-11-26 00:41:39,529 [ scc.git] DEBUG [detached HEAD 67deb8b] merge master -Dorg -Ssuccess-only
2024-11-26 00:41:39,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:41:39,529 [ scc.repo] DEBUG ## PRs found:
2024-11-26 00:41:39,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2024-11-26 00:41:39,857 [ scc.repo] DEBUG ## Branches found:
2024-11-26 00:41:39,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-11-26 00:41:39,857 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:39,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:39,863 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-26 00:41:39,868 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-26 00:41:39,868 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-26 00:41:39,874 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-26 00:41:39,884 [ scc.git] DEBUG Updating aca9e9c..100f6ae
2024-11-26 00:41:40,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls/13 HTTP/1.1" 200 None
2024-11-26 00:41:40,524 [ scc.git] DEBUG ## Unique users: []
2024-11-26 00:41:40,524 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:40,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:40,530 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-26 00:41:40,571 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:40,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:40,577 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-26 00:41:40,618 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-26 00:41:40,626 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe7c8261370> has no local changes
2024-11-26 00:41:40,626 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Updating aca9e9c..100f6ae
Previously merged:
- PR 13 jburel 'Build'
Generated by OMERO-plugins-push#258 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/)'
2024-11-26 00:41:40,635 [ scc.git] DEBUG [detached HEAD 039de3d] merge master -Dorg -Ssuccess-only
2024-11-26 00:41:40,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:41:40,635 [ scc.repo] DEBUG ## PRs found:
2024-11-26 00:41:41,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None
2024-11-26 00:41:41,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None
2024-11-26 00:41:42,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None
2024-11-26 00:41:42,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:41:42,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-26 00:41:43,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None
2024-11-26 00:41:43,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:41:43,896 [ scc.repo] DEBUG - PR 20 jburel 'Build'
2024-11-26 00:41:43,896 [ scc.repo] DEBUG ## Branches found:
2024-11-26 00:41:43,896 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-11-26 00:41:43,896 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:43,896 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:43,902 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-26 00:41:43,907 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-26 00:41:43,907 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-26 00:41:43,913 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-26 00:41:43,922 [ scc.git] DEBUG Already up to date.
2024-11-26 00:41:43,922 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head'
2024-11-26 00:41:44,357 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope
2024-11-26 00:41:44,357 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD
2024-11-26 00:41:44,359 [ scc.git] DEBUG ## Unique users: []
2024-11-26 00:41:44,359 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:44,359 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:44,365 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea'
2024-11-26 00:41:44,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:44,375 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea'
2024-11-26 00:41:44,384 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-26 00:41:44,386 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-11-26 00:41:44,386 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-11-26 00:41:44,386 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++
2024-11-26 00:41:44,386 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-)
2024-11-26 00:41:44,386 [ scc.git] DEBUG create mode 100755 .omeroci/app-build
2024-11-26 00:41:44,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:41:44,522 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-26 00:41:44,563 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:44,564 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:44,569 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-26 00:41:44,612 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-26 00:41:44,620 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe7c8308ee0> has no local changes
2024-11-26 00:41:44,620 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Already up to date.
Merged PRs:
- PR 20 jburel 'Build'
Generated by OMERO-plugins-push#258 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/)'
2024-11-26 00:41:44,629 [ scc.git] DEBUG [detached HEAD dac18c9] merge master -Dorg -Ssuccess-only
2024-11-26 00:41:44,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:41:44,629 [ scc.git] INFO Overriding base-branch from master to main
2024-11-26 00:41:44,630 [ scc.repo] DEBUG ## PRs found:
2024-11-26 00:41:45,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2024-11-26 00:41:45,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None
2024-11-26 00:41:45,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None
2024-11-26 00:41:46,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None
2024-11-26 00:41:47,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:41:47,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-26 00:41:47,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17 HTTP/1.1" 200 None
2024-11-26 00:41:48,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17/comments HTTP/1.1" 200 None
2024-11-26 00:41:48,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95 HTTP/1.1" 200 None
2024-11-26 00:41:49,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:41:49,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-26 00:41:50,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2024-11-26 00:41:50,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2024-11-26 00:41:51,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2024-11-26 00:41:51,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-11-26 00:41:52,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:41:52,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-11-26 00:41:53,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:41:53,316 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-11-26 00:41:53,316 [ scc.repo] DEBUG ## Branches found:
2024-11-26 00:41:53,316 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-11-26 00:41:53,316 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:53,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:53,323 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2024-11-26 00:41:53,328 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-26 00:41:53,328 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2024-11-26 00:41:53,333 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2024-11-26 00:41:53,339 [ scc.git] DEBUG Already up to date.
2024-11-26 00:41:53,339 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2024-11-26 00:41:53,665 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2024-11-26 00:41:53,665 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2024-11-26 00:41:53,669 [ scc.git] DEBUG ## Unique users: []
2024-11-26 00:41:53,669 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:53,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:53,675 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-11-26 00:41:53,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:53,686 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-11-26 00:41:53,836 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2024-11-26 00:41:53,837 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-26 00:41:53,838 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2024-11-26 00:41:53,840 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-26 00:41:53,843 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-11-26 00:41:53,848 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0
2024-11-26 00:41:53,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:41:53,990 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-11-26 00:41:53,996 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-11-26 00:41:54,001 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#258](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2024-11-26 00:41:54,006 [ scc.config] DEBUG Found github.token
2024-11-26 00:41:54,007 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2024-11-26 00:41:54,007 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-26 00:41:54,046 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:54,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:54,052 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-26 00:41:54,090 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-26 00:41:54,096 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe7c82e8be0> has no local changes
2024-11-26 00:41:54,096 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 17 jburel 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#258 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/)'
2024-11-26 00:41:54,103 [ scc.git] DEBUG [detached HEAD 4c54b94] merge master -Dorg -Ssuccess-only
2024-11-26 00:41:54,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:41:54,104 [ scc.repo] DEBUG ## PRs found:
2024-11-26 00:41:54,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2024-11-26 00:41:54,412 [ scc.repo] DEBUG ## Branches found:
2024-11-26 00:41:54,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-11-26 00:41:54,412 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:54,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:54,417 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-26 00:41:54,422 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-26 00:41:54,422 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-26 00:41:54,427 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-26 00:41:54,436 [ scc.git] DEBUG Updating adfa132..70b01ed
2024-11-26 00:41:55,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls/24 HTTP/1.1" 200 None
2024-11-26 00:41:55,058 [ scc.git] DEBUG ## Unique users: []
2024-11-26 00:41:55,058 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:55,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:55,065 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-26 00:41:55,104 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:55,104 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:55,110 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-26 00:41:55,149 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-26 00:41:55,155 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe7c8272fa0> has no local changes
2024-11-26 00:41:55,156 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Updating adfa132..70b01ed
Previously merged:
- PR 24 jburel 'Build'
Generated by OMERO-plugins-push#258 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/)'
2024-11-26 00:41:55,164 [ scc.git] DEBUG [detached HEAD 40d3cf8] merge master -Dorg -Ssuccess-only
2024-11-26 00:41:55,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:41:55,165 [ scc.repo] DEBUG ## PRs found:
2024-11-26 00:41:55,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2024-11-26 00:41:55,471 [ scc.repo] DEBUG ## Branches found:
2024-11-26 00:41:55,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-11-26 00:41:55,471 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:55,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:55,478 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-26 00:41:55,483 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-26 00:41:55,483 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-26 00:41:55,488 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-26 00:41:55,497 [ scc.git] DEBUG Updating 8da48e1..5bfef29
2024-11-26 00:41:56,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls/36 HTTP/1.1" 200 None
2024-11-26 00:41:56,131 [ scc.git] DEBUG ## Unique users: []
2024-11-26 00:41:56,131 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:56,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:56,138 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-26 00:41:56,180 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:56,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:56,186 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-26 00:41:56,227 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-26 00:41:56,236 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe7c828ceb0> has no local changes
2024-11-26 00:41:56,236 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Updating 8da48e1..5bfef29
Previously merged:
- PR 36 jburel 'Build'
Generated by OMERO-plugins-push#258 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/)'
2024-11-26 00:41:56,245 [ scc.git] DEBUG [detached HEAD 4d271de] merge master -Dorg -Ssuccess-only
2024-11-26 00:41:56,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:41:56,246 [ scc.repo] DEBUG ## PRs found:
2024-11-26 00:41:56,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2024-11-26 00:41:57,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2024-11-26 00:41:57,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2024-11-26 00:41:58,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-11-26 00:41:58,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:41:59,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-11-26 00:41:59,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:41:59,437 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2024-11-26 00:41:59,437 [ scc.repo] DEBUG ## Branches found:
2024-11-26 00:41:59,437 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-11-26 00:41:59,437 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:59,437 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:59,444 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-26 00:41:59,448 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-26 00:41:59,449 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-26 00:41:59,453 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-26 00:41:59,459 [ scc.git] DEBUG Already up to date.
2024-11-26 00:41:59,459 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2024-11-26 00:41:59,862 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2024-11-26 00:41:59,862 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2024-11-26 00:41:59,867 [ scc.git] DEBUG ## Unique users: []
2024-11-26 00:41:59,867 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:41:59,867 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:59,873 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-11-26 00:41:59,878 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:41:59,882 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-11-26 00:41:59,986 [ scc.git] DEBUG Auto-merging Dockerfile
2024-11-26 00:41:59,987 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2024-11-26 00:41:59,987 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-26 00:41:59,987 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-26 00:41:59,994 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-11-26 00:42:00,001 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2024-11-26 00:42:00,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:00,137 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-11-26 00:42:00,143 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-11-26 00:42:00,148 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#258](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2024-11-26 00:42:00,154 [ scc.config] DEBUG Found github.token
2024-11-26 00:42:00,154 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2024-11-26 00:42:00,154 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-26 00:42:00,193 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:42:00,193 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:42:00,198 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-26 00:42:00,237 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-26 00:42:00,243 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe7c82177f0> has no local changes
2024-11-26 00:42:00,243 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#258 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/)'
2024-11-26 00:42:00,251 [ scc.git] DEBUG [detached HEAD dc1aa89] merge master -Dorg -Ssuccess-only
2024-11-26 00:42:00,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:00,252 [ scc.git] INFO Overriding base-branch from master to develop
2024-11-26 00:42:00,252 [ scc.repo] DEBUG ## PRs found:
2024-11-26 00:42:00,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-11-26 00:42:01,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-11-26 00:42:01,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-11-26 00:42:02,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-11-26 00:42:02,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:42:02,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-26 00:42:03,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-11-26 00:42:03,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:42:03,767 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-11-26 00:42:04,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-11-26 00:42:04,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-11-26 00:42:05,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None
2024-11-26 00:42:05,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-11-26 00:42:06,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-11-26 00:42:06,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-11-26 00:42:07,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-11-26 00:42:07,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-11-26 00:42:07,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-26 00:42:08,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-11-26 00:42:08,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-11-26 00:42:08,847 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-11-26 00:42:09,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-11-26 00:42:09,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-11-26 00:42:10,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-11-26 00:42:10,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-11-26 00:42:10,902 [ scc.repo] DEBUG ## Branches found:
2024-11-26 00:42:10,903 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-11-26 00:42:10,903 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:42:10,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:42:10,908 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-11-26 00:42:10,913 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-26 00:42:10,913 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-11-26 00:42:10,918 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-11-26 00:42:10,923 [ scc.git] DEBUG Already up to date.
2024-11-26 00:42:10,923 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-11-26 00:42:11,535 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-11-26 00:42:11,535 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-11-26 00:42:11,540 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-11-26 00:42:11,946 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-11-26 00:42:11,946 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-11-26 00:42:11,950 [ scc.git] DEBUG ## Unique users: []
2024-11-26 00:42:11,950 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:42:11,950 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:42:11,955 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-11-26 00:42:11,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:42:11,966 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-11-26 00:42:12,005 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-11-26 00:42:12,005 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-11-26 00:42:12,005 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-26 00:42:12,005 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-26 00:42:12,010 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-11-26 00:42:12,018 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-11-26 00:42:12,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:12,186 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-11-26 00:42:12,193 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-11-26 00:42:12,198 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#258](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-11-26 00:42:12,203 [ scc.config] DEBUG Found github.token
2024-11-26 00:42:12,203 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-11-26 00:42:12,203 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-11-26 00:42:12,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:42:12,214 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-11-26 00:42:12,235 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-26 00:42:12,237 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-11-26 00:42:12,237 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-11-26 00:42:12,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:12,586 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-26 00:42:12,626 [ scc.git] DEBUG Get sha1 of %s
2024-11-26 00:42:12,627 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-26 00:42:12,631 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-26 00:42:12,670 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-26 00:42:12,677 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe7c8260af0> has no local changes
2024-11-26 00:42:12,677 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#258 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/)'
2024-11-26 00:42:12,685 [ scc.git] DEBUG [detached HEAD 95f34ee] merge master -Dorg -Ssuccess-only
2024-11-26 00:42:12,686 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:12,686 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-26 00:42:12,760 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2024-11-26 00:42:12,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:12,980 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2024-11-26 00:42:12,985 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2024-11-26 00:42:13,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:13,369 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2024-11-26 00:42:13,374 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2024-11-26 00:42:13,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:13,759 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2024-11-26 00:42:13,763 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2024-11-26 00:42:14,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:14,157 [ scc.config] DEBUG Found submodule.omero-figure.url
2024-11-26 00:42:14,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:14,541 [ scc.config] DEBUG Found submodule.omero-figure.branch
2024-11-26 00:42:14,547 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2024-11-26 00:42:14,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:14,956 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2024-11-26 00:42:14,961 [ scc.config] DEBUG Found submodule.omero-gallery.url
2024-11-26 00:42:15,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:15,340 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2024-11-26 00:42:15,345 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2024-11-26 00:42:15,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:15,730 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2024-11-26 00:42:15,737 [ scc.config] DEBUG Found submodule.omero-mapr.url
2024-11-26 00:42:16,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:16,144 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2024-11-26 00:42:16,149 [ scc.config] DEBUG Found submodule.omero-metadata.url
2024-11-26 00:42:16,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:16,534 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2024-11-26 00:42:16,539 [ scc.config] DEBUG Found submodule.omero-parade.url
2024-11-26 00:42:16,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:16,933 [ scc.config] DEBUG Found submodule.omero-parade.branch
2024-11-26 00:42:16,937 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2024-11-26 00:42:17,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:17,360 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2024-11-26 00:42:17,365 [ scc.config] DEBUG Found submodule.omero-rois.url
2024-11-26 00:42:17,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:17,765 [ scc.config] DEBUG Found submodule.omero-signup.url
2024-11-26 00:42:18,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:18,166 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2024-11-26 00:42:18,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:18,540 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2024-11-26 00:42:18,545 [ scc.config] DEBUG Found submodule.omero-upload.url
2024-11-26 00:42:18,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:18,935 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2024-11-26 00:42:19,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:19,325 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2024-11-26 00:42:19,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:19,702 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2024-11-26 00:42:19,706 [ scc.config] DEBUG Found submodule.omero-weberror.url
2024-11-26 00:42:20,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:20,112 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2024-11-26 00:42:20,116 [ scc.config] DEBUG Found submodule.omero-webtest.url
2024-11-26 00:42:20,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:20,494 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2024-11-26 00:42:20,498 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2024-11-26 00:42:20,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:20,891 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2024-11-26 00:42:20,896 [ scc.config] DEBUG Found submodule.scripts.url
2024-11-26 00:42:21,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-26 00:42:21,290 [ scc.config] DEBUG Found submodule.scripts.branch
2024-11-26 00:42:21,291 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-26 00:42:21,364 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe7cae84a60> has local changes
2024-11-26 00:42:21,365 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 400 dependabot[bot] 'Bump omero-figure from `24444fe` to `e0b0d1a`'
- PR 401 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `387b490`'
- PR 402 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `369753f`'
- PR 403 dependabot[bot] 'Bump omero-gallery from `56f4435` to `acd798d`'
- PR 404 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `c45d76c`'
Repository: ome/minimal-omero-client
Already up to date.
Merged PRs:
- PR 66 jburel 'Gateway 5 9 2'
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Updating 027b3e6..4777ef8
Previously merged:
- PR 27 jburel 'Build'
- PR 25 jburel 'review message'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
- PR 59 will-moore 'Apply settings to Plate' (status: failure)
- PR 54 dominikl 'Change rendering settings spec' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
- PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
Already up to date.
Merged PRs:
- PR 67 sbesson 'omero render set: clarify help around settings for disabled channels'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Updating 9b73dd9..11d3587
Previously merged:
- PR 165 jburel 'Build'
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 102 will-moore 'Zarr export tests'
- PR 123 will-moore 'Support export of Fileset:ID'
Repository: ome/omero-figure
Excluded PRs:
- PR 600 Rdornier 'Label on rois' (user: Rdornier)
- PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Already up to date.
Merged PRs:
- PR 578 Rdornier 'Image outline'
- PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality'
- PR 592 will-moore 'Filter owners and groups dropdown lists'
- PR 596 Tom-TBT 'Dynamic lut for figure'
- PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled'
- PR 599 Tom-TBT 'Patch label text selection and cue for dragging'
Conflicting PRs (not included):
- PR 595 Rdornier 'Rotate image panel by 90°'
Repository: ome/omero-fpbioimage
Updating e5b3ca3..3b6c05a
Previously merged:
- PR 30 jburel 'Build'
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 112 jburel 'Build'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Updating 387b490..6f1597f
Previously merged:
- PR 488 will-moore 'Mobile layout'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 496 will-moore 'Add changelog 0.15.0'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 93 will-moore 'changelog 0.5.3'
Repository: ome/omero-metadata
Already up to date.
Merged PRs:
- PR 89 jburel 'Build'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Updating 5d441c2..fb5ae86
Previously merged:
- PR 133 jburel 'Build'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
Repository: ome/omero-prometheus-tools
Excluded PRs:
- PR 15 jburel 'Build' (status: failure)
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
- PR 29 jburel 'Build'
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 21 jburel 'Build'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Repository: ome/omero-upload
Updating aca9e9c..100f6ae
Previously merged:
- PR 13 jburel 'Build'
Repository: ome/omero-virtual-microscope
Already up to date.
Merged PRs:
- PR 20 jburel 'Build'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 17 jburel 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Updating adfa132..70b01ed
Previously merged:
- PR 24 jburel 'Build'
Repository: openmicroscopy/omero-webtest
Updating 8da48e1..5bfef29
Previously merged:
- PR 36 jburel 'Build'
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#258 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/258/)'
2024-11-26 00:42:21,437 [ scc.git] DEBUG [detached HEAD cc5ba7b] merge master -Dorg -Ssuccess-only
2024-11-26 00:42:21,437 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2024-11-26 00:42:21,437 [ scc.merge] INFO Repository: ome/omero-plugins
2024-11-26 00:42:21,437 [ scc.merge] INFO Already up to date.
2024-11-26 00:42:21,437 [ scc.merge] INFO
2024-11-26 00:42:21,437 [ scc.merge] INFO Merged PRs:
2024-11-26 00:42:21,437 [ scc.merge] INFO - PR 400 dependabot[bot] 'Bump omero-figure from `24444fe` to `e0b0d1a`'
2024-11-26 00:42:21,437 [ scc.merge] INFO - PR 401 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `387b490`'
2024-11-26 00:42:21,437 [ scc.merge] INFO - PR 402 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `369753f`'
2024-11-26 00:42:21,437 [ scc.merge] INFO - PR 403 dependabot[bot] 'Bump omero-gallery from `56f4435` to `acd798d`'
2024-11-26 00:42:21,437 [ scc.merge] INFO - PR 404 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `c45d76c`'
2024-11-26 00:42:21,437 [ scc.merge] INFO
2024-11-26 00:42:21,437 [ scc.merge] INFO Repository: ome/minimal-omero-client
2024-11-26 00:42:21,438 [ scc.merge] INFO Already up to date.
2024-11-26 00:42:21,438 [ scc.merge] INFO
2024-11-26 00:42:21,438 [ scc.merge] INFO Merged PRs:
2024-11-26 00:42:21,438 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2'
2024-11-26 00:42:21,438 [ scc.merge] INFO
2024-11-26 00:42:21,438 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2024-11-26 00:42:21,438 [ scc.merge] INFO Excluded PRs:
2024-11-26 00:42:21,438 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2024-11-26 00:42:21,438 [ scc.merge] INFO Updating 027b3e6..4777ef8
2024-11-26 00:42:21,438 [ scc.merge] INFO Previously merged:
2024-11-26 00:42:21,438 [ scc.merge] INFO - PR 27 jburel 'Build'
2024-11-26 00:42:21,438 [ scc.merge] INFO - PR 25 jburel 'review message'
2024-11-26 00:42:21,438 [ scc.merge] INFO
2024-11-26 00:42:21,438 [ scc.merge] INFO
2024-11-26 00:42:21,438 [ scc.merge] INFO Repository: ome/omero-cli-render
2024-11-26 00:42:21,438 [ scc.merge] INFO Excluded PRs:
2024-11-26 00:42:21,438 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
2024-11-26 00:42:21,438 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' (status: failure)
2024-11-26 00:42:21,438 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft)
2024-11-26 00:42:21,438 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2024-11-26 00:42:21,438 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
2024-11-26 00:42:21,438 [ scc.merge] INFO Already up to date.
2024-11-26 00:42:21,438 [ scc.merge] INFO
2024-11-26 00:42:21,438 [ scc.merge] INFO Merged PRs:
2024-11-26 00:42:21,438 [ scc.merge] INFO - PR 67 sbesson 'omero render set: clarify help around settings for disabled channels'
2024-11-26 00:42:21,438 [ scc.merge] INFO
2024-11-26 00:42:21,438 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2024-11-26 00:42:21,438 [ scc.merge] INFO Excluded PRs:
2024-11-26 00:42:21,438 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-11-26 00:42:21,438 [ scc.merge] INFO Updating 9b73dd9..11d3587
2024-11-26 00:42:21,438 [ scc.merge] INFO Previously merged:
2024-11-26 00:42:21,438 [ scc.merge] INFO - PR 165 jburel 'Build'
2024-11-26 00:42:21,438 [ scc.merge] INFO
2024-11-26 00:42:21,438 [ scc.merge] INFO Merged PRs:
2024-11-26 00:42:21,438 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2024-11-26 00:42:21,438 [ scc.merge] INFO
2024-11-26 00:42:21,438 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-26 00:42:21,438 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests'
2024-11-26 00:42:21,438 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID'
2024-11-26 00:42:21,439 [ scc.merge] INFO
2024-11-26 00:42:21,439 [ scc.merge] INFO Repository: ome/omero-figure
2024-11-26 00:42:21,439 [ scc.merge] INFO Excluded PRs:
2024-11-26 00:42:21,439 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier)
2024-11-26 00:42:21,439 [ scc.merge] INFO - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier)
2024-11-26 00:42:21,439 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2024-11-26 00:42:21,439 [ scc.merge] INFO Already up to date.
2024-11-26 00:42:21,439 [ scc.merge] INFO
2024-11-26 00:42:21,439 [ scc.merge] INFO Merged PRs:
2024-11-26 00:42:21,439 [ scc.merge] INFO - PR 578 Rdornier 'Image outline'
2024-11-26 00:42:21,439 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality'
2024-11-26 00:42:21,439 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists'
2024-11-26 00:42:21,439 [ scc.merge] INFO - PR 596 Tom-TBT 'Dynamic lut for figure'
2024-11-26 00:42:21,439 [ scc.merge] INFO - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled'
2024-11-26 00:42:21,439 [ scc.merge] INFO - PR 599 Tom-TBT 'Patch label text selection and cue for dragging'
2024-11-26 00:42:21,439 [ scc.merge] INFO
2024-11-26 00:42:21,439 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-26 00:42:21,439 [ scc.merge] INFO - PR 595 Rdornier 'Rotate image panel by 90°'
2024-11-26 00:42:21,439 [ scc.merge] INFO
2024-11-26 00:42:21,439 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2024-11-26 00:42:21,439 [ scc.merge] INFO Updating e5b3ca3..3b6c05a
2024-11-26 00:42:21,439 [ scc.merge] INFO Previously merged:
2024-11-26 00:42:21,439 [ scc.merge] INFO - PR 30 jburel 'Build'
2024-11-26 00:42:21,439 [ scc.merge] INFO
2024-11-26 00:42:21,439 [ scc.merge] INFO Merged PRs:
2024-11-26 00:42:21,439 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2024-11-26 00:42:21,439 [ scc.merge] INFO
2024-11-26 00:42:21,439 [ scc.merge] INFO Repository: ome/omero-gallery
2024-11-26 00:42:21,439 [ scc.merge] INFO Already up to date.
2024-11-26 00:42:21,439 [ scc.merge] INFO
2024-11-26 00:42:21,439 [ scc.merge] INFO Merged PRs:
2024-11-26 00:42:21,439 [ scc.merge] INFO - PR 112 jburel 'Build'
2024-11-26 00:42:21,439 [ scc.merge] INFO
2024-11-26 00:42:21,439 [ scc.merge] INFO Repository: ome/omero-iviewer
2024-11-26 00:42:21,439 [ scc.merge] INFO Excluded PRs:
2024-11-26 00:42:21,439 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2024-11-26 00:42:21,439 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2024-11-26 00:42:21,439 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2024-11-26 00:42:21,439 [ scc.merge] INFO Updating 387b490..6f1597f
2024-11-26 00:42:21,439 [ scc.merge] INFO Previously merged:
2024-11-26 00:42:21,440 [ scc.merge] INFO - PR 488 will-moore 'Mobile layout'
2024-11-26 00:42:21,440 [ scc.merge] INFO
2024-11-26 00:42:21,440 [ scc.merge] INFO Merged PRs:
2024-11-26 00:42:21,440 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2024-11-26 00:42:21,440 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2024-11-26 00:42:21,440 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2024-11-26 00:42:21,440 [ scc.merge] INFO - PR 496 will-moore 'Add changelog 0.15.0'
2024-11-26 00:42:21,440 [ scc.merge] INFO
2024-11-26 00:42:21,440 [ scc.merge] INFO Repository: ome/omero-mapr
2024-11-26 00:42:21,440 [ scc.merge] INFO Excluded PRs:
2024-11-26 00:42:21,440 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2024-11-26 00:42:21,440 [ scc.merge] INFO Already up to date.
2024-11-26 00:42:21,440 [ scc.merge] INFO
2024-11-26 00:42:21,440 [ scc.merge] INFO Merged PRs:
2024-11-26 00:42:21,440 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2024-11-26 00:42:21,440 [ scc.merge] INFO - PR 93 will-moore 'changelog 0.5.3'
2024-11-26 00:42:21,440 [ scc.merge] INFO
2024-11-26 00:42:21,440 [ scc.merge] INFO Repository: ome/omero-metadata
2024-11-26 00:42:21,440 [ scc.merge] INFO Already up to date.
2024-11-26 00:42:21,440 [ scc.merge] INFO
2024-11-26 00:42:21,440 [ scc.merge] INFO Merged PRs:
2024-11-26 00:42:21,440 [ scc.merge] INFO - PR 89 jburel 'Build'
2024-11-26 00:42:21,440 [ scc.merge] INFO
2024-11-26 00:42:21,440 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-26 00:42:21,440 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-11-26 00:42:21,440 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-11-26 00:42:21,440 [ scc.merge] INFO
2024-11-26 00:42:21,440 [ scc.merge] INFO Repository: ome/omero-parade
2024-11-26 00:42:21,440 [ scc.merge] INFO Excluded PRs:
2024-11-26 00:42:21,440 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2024-11-26 00:42:21,440 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2024-11-26 00:42:21,440 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2024-11-26 00:42:21,440 [ scc.merge] INFO Updating 5d441c2..fb5ae86
2024-11-26 00:42:21,440 [ scc.merge] INFO Previously merged:
2024-11-26 00:42:21,440 [ scc.merge] INFO - PR 133 jburel 'Build'
2024-11-26 00:42:21,440 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-11-26 00:42:21,440 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-11-26 00:42:21,440 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-11-26 00:42:21,440 [ scc.merge] INFO
2024-11-26 00:42:21,440 [ scc.merge] INFO
2024-11-26 00:42:21,441 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2024-11-26 00:42:21,441 [ scc.merge] INFO Excluded PRs:
2024-11-26 00:42:21,441 [ scc.merge] INFO - PR 15 jburel 'Build' (status: failure)
2024-11-26 00:42:21,441 [ scc.merge] INFO Already up to date.
2024-11-26 00:42:21,441 [ scc.merge] INFO
2024-11-26 00:42:21,441 [ scc.merge] INFO Merged PRs:
2024-11-26 00:42:21,441 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel'
2024-11-26 00:42:21,441 [ scc.merge] INFO
2024-11-26 00:42:21,441 [ scc.merge] INFO Repository: ome/omero-rois
2024-11-26 00:42:21,441 [ scc.merge] INFO Excluded PRs:
2024-11-26 00:42:21,441 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-11-26 00:42:21,441 [ scc.merge] INFO Already up to date.
2024-11-26 00:42:21,441 [ scc.merge] INFO
2024-11-26 00:42:21,441 [ scc.merge] INFO Merged PRs:
2024-11-26 00:42:21,441 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-11-26 00:42:21,441 [ scc.merge] INFO - PR 29 jburel 'Build'
2024-11-26 00:42:21,441 [ scc.merge] INFO
2024-11-26 00:42:21,441 [ scc.merge] INFO Repository: ome/omero-signup
2024-11-26 00:42:21,441 [ scc.merge] INFO Already up to date.
2024-11-26 00:42:21,441 [ scc.merge] INFO
2024-11-26 00:42:21,441 [ scc.merge] INFO Merged PRs:
2024-11-26 00:42:21,441 [ scc.merge] INFO - PR 21 jburel 'Build'
2024-11-26 00:42:21,441 [ scc.merge] INFO
2024-11-26 00:42:21,441 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-26 00:42:21,441 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2024-11-26 00:42:21,441 [ scc.merge] INFO
2024-11-26 00:42:21,441 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2024-11-26 00:42:21,441 [ scc.merge] INFO Already up to date.
2024-11-26 00:42:21,441 [ scc.merge] INFO
2024-11-26 00:42:21,441 [ scc.merge] INFO Merged PRs:
2024-11-26 00:42:21,441 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-11-26 00:42:21,441 [ scc.merge] INFO
2024-11-26 00:42:21,441 [ scc.merge] INFO Repository: ome/omero-upload
2024-11-26 00:42:21,441 [ scc.merge] INFO Updating aca9e9c..100f6ae
2024-11-26 00:42:21,441 [ scc.merge] INFO Previously merged:
2024-11-26 00:42:21,441 [ scc.merge] INFO - PR 13 jburel 'Build'
2024-11-26 00:42:21,441 [ scc.merge] INFO
2024-11-26 00:42:21,441 [ scc.merge] INFO
2024-11-26 00:42:21,441 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2024-11-26 00:42:21,441 [ scc.merge] INFO Already up to date.
2024-11-26 00:42:21,442 [ scc.merge] INFO
2024-11-26 00:42:21,442 [ scc.merge] INFO Merged PRs:
2024-11-26 00:42:21,442 [ scc.merge] INFO - PR 20 jburel 'Build'
2024-11-26 00:42:21,442 [ scc.merge] INFO
2024-11-26 00:42:21,442 [ scc.merge] INFO Repository: ome/omero-web-zarr
2024-11-26 00:42:21,442 [ scc.merge] INFO Excluded PRs:
2024-11-26 00:42:21,442 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure)
2024-11-26 00:42:21,442 [ scc.merge] INFO - PR 17 jburel 'Build' (status: failure)
2024-11-26 00:42:21,442 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2024-11-26 00:42:21,442 [ scc.merge] INFO Already up to date.
2024-11-26 00:42:21,442 [ scc.merge] INFO
2024-11-26 00:42:21,442 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-26 00:42:21,442 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-11-26 00:42:21,442 [ scc.merge] INFO
2024-11-26 00:42:21,442 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2024-11-26 00:42:21,442 [ scc.merge] INFO Updating adfa132..70b01ed
2024-11-26 00:42:21,442 [ scc.merge] INFO Previously merged:
2024-11-26 00:42:21,442 [ scc.merge] INFO - PR 24 jburel 'Build'
2024-11-26 00:42:21,442 [ scc.merge] INFO
2024-11-26 00:42:21,442 [ scc.merge] INFO
2024-11-26 00:42:21,442 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2024-11-26 00:42:21,442 [ scc.merge] INFO Updating 8da48e1..5bfef29
2024-11-26 00:42:21,442 [ scc.merge] INFO Previously merged:
2024-11-26 00:42:21,442 [ scc.merge] INFO - PR 36 jburel 'Build'
2024-11-26 00:42:21,442 [ scc.merge] INFO
2024-11-26 00:42:21,442 [ scc.merge] INFO
2024-11-26 00:42:21,442 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2024-11-26 00:42:21,442 [ scc.merge] INFO Already up to date.
2024-11-26 00:42:21,442 [ scc.merge] INFO
2024-11-26 00:42:21,442 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-26 00:42:21,442 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2024-11-26 00:42:21,442 [ scc.merge] INFO
2024-11-26 00:42:21,442 [ scc.merge] INFO Repository: ome/scripts
2024-11-26 00:42:21,442 [ scc.merge] INFO Excluded PRs:
2024-11-26 00:42:21,442 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-11-26 00:42:21,442 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-11-26 00:42:21,442 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-11-26 00:42:21,442 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-11-26 00:42:21,442 [ scc.merge] INFO Already up to date.
2024-11-26 00:42:21,442 [ scc.merge] INFO
2024-11-26 00:42:21,443 [ scc.merge] INFO Merged PRs:
2024-11-26 00:42:21,443 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-11-26 00:42:21,443 [ scc.merge] INFO
2024-11-26 00:42:21,443 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-26 00:42:21,443 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-11-26 00:42:21,443 [ scc.merge] INFO
2024-11-26 00:42:21,443 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-11-26 00:42:21,443 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,449 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-11-26 00:42:21,449 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,454 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,454 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-11-26 00:42:21,454 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-11-26 00:42:21,459 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-11-26 00:42:21,464 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-11-26 00:42:21,469 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-11-26 00:42:21,474 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-11-26 00:42:21,478 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-11-26 00:42:21,483 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-11-26 00:42:21,488 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,492 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-11-26 00:42:21,493 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-11-26 00:42:21,498 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,502 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,502 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-11-26 00:42:21,502 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,508 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-11-26 00:42:21,508 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,513 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-11-26 00:42:21,513 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-11-26 00:42:21,517 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-11-26 00:42:21,522 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-11-26 00:42:21,527 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-11-26 00:42:21,532 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-11-26 00:42:21,537 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-11-26 00:42:21,541 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-11-26 00:42:21,546 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,550 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-26 00:42:21,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-11-26 00:42:21,551 [ scc.git] DEBUG Calling 'git remote'
2024-11-26 00:42:21,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
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WARNING: The wheel package is not available.
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WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.9.2 to 5.10.1-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 9bce91d] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 027b3e6
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from 369753f
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 9b73dd9
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from e0b0d1ae
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from e5b3ca3
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from acd798d
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from 387b490
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from c45d76c
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from fc20959
nothing to commit, working tree clean
Entering 'omero-parade'
HEAD detached from 5d441c2
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from 18bccb6
nothing to commit, working tree clean
Entering 'omero-rois'
HEAD detached from 5c752d5
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from c8610db
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from cda3ec6
nothing to commit, working tree clean
Entering 'omero-upload'
HEAD detached from aca9e9c
nothing to commit, working tree clean
Entering 'omero-virtual-microscope'
HEAD detached from deab817
nothing to commit, working tree clean
Entering 'omero-web-zarr'
HEAD detached from 67bb245
nothing to commit, working tree clean
Entering 'omero-weberror'
HEAD detached from adfa132
nothing to commit, working tree clean
Entering 'omero-webtest'
HEAD detached from 8da48e1
nothing to commit, working tree clean
Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
nothing to commit, working tree clean
Entering 'scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
[detached HEAD 1370984] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-11-26 00:43:07,916 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-11-26 00:43:16,762 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-11-26 00:43:19,108 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-11-26 00:43:23,564 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-11-26 00:44:08,338 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS
![[Jenkins]](/jenkins/static/f6f303f9/images/svgs/logo.svg){kind=logo}
