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Summary

  1. merge master -Dorg -Ssuccess-only (details)
  2. Update component versions (details)
Commit f3bea36e5fd6578f570d700efada2e1a9ec17b27 by snoopycrimecop
merge master -Dorg -Ssuccess-only

Repository: ome/bio-formats-build
Excluded PRs:
  - PR 641 dependabot[bot] 'Bump bioformats from `e4ffbe8` to `e431517`' (status: None)
  - PR 632 dependabot[bot] 'Bump ZarrReader from `9a9e662` to `b17c3ab`' (status: failure)
Already up to date.

Merged PRs:
  - PR 640 dependabot[bot] 'Bump bio-formats-documentation from `d5ec673` to `e9f8a22`'

Repository: ome/ZarrReader
Excluded PRs:
  - PR 95 dgault 'Class cast exception when parsing metadata' (status: failure)
  - PR 20 dgault 'ZarrReader: Use chunk API' (exclude comment)
Updating 9a9e662..b17c3ab
Previously merged:
  - PR 93 dgault 'Bump version to 0.5.3-SNAPSHOT'
  - PR 92 dgault 'Bump version to 0.5.2'
  - PR 91 dgault 'Bump Bio-Formats version to 7.3.1'

Repository: ome/bio-formats-documentation
Already up to date.

Merged PRs:
  - PR 390 melissalinkert 'Update precompressed tile documentation'

Repository: ome/bio-formats-examples
Already up to date.

Merged PRs:
  - PR 69 dgault 'Add macro examples from OME 2020 NGFF workshop'
  - PR 127 jburel 'Matlab Examples'
  - PR 128 sbesson 'Relicense Bio-Formats examples under BSD 2-clause'

Repository: openmicroscopy/bioformats
Excluded PRs:
  - PR 4233 tstoeter 'Handle UnknownFormatException for batch processing multiple files.' (user: tstoeter)
  - PR 4217 marcobitplane 'Imaris IMS Reader: support for LZ4 compression and performance improvements' (user: marcobitplane)
  - PR 4196 melissalinkert 'DICOM: use FrameTimePointer to detect timelapse data' (label: exclude)
  - PR 4172 sbesson 'testSaneUsedFiles: check getCurrentFile is the first file in the getUsedFiles list' (stage: draft)
  - PR 4131 dgault 'VirtualImagePlus: Retain B&C settings for each slice' (status: failure)
  - PR 4092 NicoKiaru 'Commits an alternative Zeiss CZI Reader' (user: NicoKiaru)
  - PR 4000 XLEFReaderForBioformats 'Reworking LMSMetadata package and adding a new lif reader' (user: XLEFReaderForBioformats)
  - PR 3794 dgault 'Chunk API: Add new API and functionality for reading and writing chunks' (label: exclude)
  - PR 3618 dgault 'Memoizer: Persist caching to sub readers' (label: breaking)
Updating e4ffbe89ba..e431517dd4
Previously merged:
  - PR 4215 melissalinkert 'Fix DICOM export in ImageJ'
  - PR 4205 NicoKiaru 'OIRReader: Major performance improvement when reading a ROI within a plane'

Merged PRs:
  - PR 4130 carandraug 'matlab/bfGetPlane.m: avoid use of makeDataArray2D when Octave (ome/bio-formats-octave-docker#29)'
  - PR 4164 melissalinkert 'Reduce DICOM write time'
  - PR 4195 WalkerKnapp 'Andor SIF: Support files larger than 4 GB and with non-fixed-size footers'
  - PR 4219 melissalinkert 'ImageJ exporter: save original metadata'
  - PR 4234 sbesson 'CV7000: handle NullPointerException when resetting allFiles in close()'

Repository: ome/ome-codecs
Excluded PRs:
  - PR 40 atbest 'Implement Zstandard compression' (user: atbest)
Already up to date.

Merged PRs:
  - PR 37 melissalinkert 'JPEG: warn if quality is outside [0.25, 1.0]'
  - PR 41 rharkes 'Add LZ4 compression/decompression'

Repository: ome/ome-common-java
Excluded PRs:
  - PR 59 NicoKiaru 'adds AverageImageScaler implementation of IImageScaler' (user: NicoKiaru)
Already up to date.

Repository: ome/ome-jai
Already up to date.

Repository: ome/ome-mdbtools
Already up to date.

Repository: ome/ome-metakit
Already up to date.

Repository: ome/ome-model
Already up to date.

Conflicting PRs (not included):
  - PR 174 jburel 'Remove docs'

Repository: ome/ome-poi
Already up to date.

Repository: ome/ome-stubs
Already up to date.

Generated by BIOFORMATS-push#196 (https://merge-ci.openmicroscopy.org/jenkins/job/BIOFORMATS-push/196/)
The file was modified ome-common-java (diff)
The file was modified ome-model (diff)
The file was modified bio-formats-documentation (diff)
The file was modified ome-metakit (diff)
The file was modified ome-codecs (diff)
The file was modified ome-poi (diff)
The file was modified bio-formats-examples (diff)
The file was modified ome-mdbtools (diff)
The file was modified ome-jai (diff)
The file was modified ome-stubs (diff)
The file was modified .gitmodules (diff)
The file was modified bioformats (diff)
The file was modified ZarrReader (diff)
Commit c524d04f85c8901afbb0fa08311616a38a4f1d24 by snoopycrimecop
Update component versions
The file was modified ome-model (diff)
The file was modified bio-formats-examples (diff)
The file was modified bioformats (diff)
The file was modified ome-codecs (diff)
The file was modified ome-poi (diff)
The file was modified ome-metakit (diff)
The file was modified bio-formats-documentation (diff)