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#14 293.8 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#14 293.8 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
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Downloaded from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (4.3 MB at 1.5 MB/s)
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#14 299.3 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Some input files use or override a deprecated API.
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#14 299.5 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java uses unchecked or unsafe operations.
#14 299.5 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: Recompile with -Xlint:unchecked for details.
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#14 299.6 [[1;34mINFO[m] -------------------------------------------------------
#14 299.6 [[1;34mINFO[m] T E S T S
#14 299.6 [[1;34mINFO[m] -------------------------------------------------------
#14 299.7 [[1;34mINFO[m] Running [1mTestSuite[m
#14 300.9 2025-05-15 00:13:32,528 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@24528a25 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 300.9 2025-05-15 00:13:32,531 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@46292372 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 301.0 2025-05-15 00:13:32,582 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@1f9d6c7b reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 301.0 2025-05-15 00:13:32,583 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@68ace111 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 301.0 2025-05-15 00:13:32,630 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@4c9e9fb8 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 301.0 2025-05-15 00:13:32,630 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@9ec531 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 301.1 2025-05-15 00:13:32,678 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@29006752 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 301.1 2025-05-15 00:13:32,678 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@534243e4 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 301.1 2025-05-15 00:13:32,722 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@2e647e59 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 301.1 2025-05-15 00:13:32,723 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@4bd2f0dc reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 301.2 2025-05-15 00:13:32,784 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@6bff19ff reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 301.2 2025-05-15 00:13:32,784 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@41e1455d reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 301.2 2025-05-15 00:13:32,831 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@35c09b94 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 301.2 2025-05-15 00:13:32,831 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@2d0bfb24 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 301.3 2025-05-15 00:13:32,873 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@59942b48 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 301.3 2025-05-15 00:13:32,873 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@1869f114 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 301.5 [[1;34mINFO[m] [1;32mTests run: [0;1;32m99[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.799 s - in [1mTestSuite[m
#14 301.9 [[1;34mINFO[m]
#14 301.9 [[1;34mINFO[m] Results:
#14 301.9 [[1;34mINFO[m]
#14 301.9 [[1;34mINFO[m] [1;32mTests run: 99, Failures: 0, Errors: 0, Skipped: 0[m
#14 301.9 [[1;34mINFO[m]
#14 301.9 [[1;34mINFO[m]
#14 301.9 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-mdb-test)[m @ [36mformats-gpl[0;1m ---[m
#14 301.9 [[1;34mINFO[m]
#14 301.9 [[1;34mINFO[m] -------------------------------------------------------
#14 301.9 [[1;34mINFO[m] T E S T S
#14 301.9 [[1;34mINFO[m] -------------------------------------------------------
#14 302.0 [[1;34mINFO[m] Running [1mTestSuite[m
#14 302.5 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.434 s - in [1mTestSuite[m
#14 302.8 [[1;34mINFO[m]
#14 302.8 [[1;34mINFO[m] Results:
#14 302.8 [[1;34mINFO[m]
#14 302.8 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 302.8 [[1;34mINFO[m]
#14 302.8 [[1;34mINFO[m]
#14 302.8 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-poi-test)[m @ [36mformats-gpl[0;1m ---[m
#14 302.8 [[1;34mINFO[m]
#14 302.8 [[1;34mINFO[m] -------------------------------------------------------
#14 302.8 [[1;34mINFO[m] T E S T S
#14 302.8 [[1;34mINFO[m] -------------------------------------------------------
#14 303.0 [[1;34mINFO[m] Running [1mTestSuite[m
#14 303.4 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.414 s - in [1mTestSuite[m
#14 303.7 [[1;34mINFO[m]
#14 303.7 [[1;34mINFO[m] Results:
#14 303.7 [[1;34mINFO[m]
#14 303.7 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 303.7 [[1;34mINFO[m]
#14 303.7 [[1;34mINFO[m]
#14 303.7 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-netcdf-test)[m @ [36mformats-gpl[0;1m ---[m
#14 303.7 [[1;34mINFO[m]
#14 303.7 [[1;34mINFO[m] -------------------------------------------------------
#14 303.7 [[1;34mINFO[m] T E S T S
#14 303.7 [[1;34mINFO[m] -------------------------------------------------------
#14 303.9 [[1;34mINFO[m] Running [1mTestSuite[m
#14 304.3 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.431 s - in [1mTestSuite[m
#14 304.6 [[1;34mINFO[m]
#14 304.6 [[1;34mINFO[m] Results:
#14 304.6 [[1;34mINFO[m]
#14 304.6 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 304.6 [[1;34mINFO[m]
#14 304.6 [[1;34mINFO[m]
#14 304.6 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mformats-gpl[0;1m ---[m
#14 304.7 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT.jar
#14 304.7 [[1;34mINFO[m]
#14 304.7 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m >>>[m
#14 304.7 [[1;34mINFO[m]
#14 304.7 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mformats-gpl[0;1m ---[m
#14 304.7 [[1;34mINFO[m]
#14 304.7 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 304.7 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 304.7 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 304.7 [[1;34mINFO[m] Storing buildNumber: 97759247f805df5b65152cb5c1259c0fd79b0fe9 at timestamp: 1747268016303
#14 304.7 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 304.7 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 304.7
#14 304.7 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 304.7 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 304.7 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 304.7 [[1;34mINFO[m]
#14 304.7 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m <<<[m
#14 304.7 [[1;34mINFO[m]
#14 304.7 [[1;34mINFO[m]
#14 304.7 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 304.8 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-sources.jar
#14 304.8 [[1;34mINFO[m]
#14 304.8 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 304.8 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-tests.jar
#14 304.8 [[1;34mINFO[m]
#14 304.8 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mformats-gpl[0;1m ---[m
#14 304.8 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#14 304.8 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#14 304.8 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT-sources.jar
#14 304.8 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT-tests.jar
#14 304.8 [[1;34mINFO[m]
#14 304.8 [[1;34mINFO[m] [1m----------------------< [0;36mome:bio-formats_plugins[0;1m >-----------------------[m
#14 304.8 [[1;34mINFO[m] [1mBuilding Bio-Formats Plugins for ImageJ 8.2.0-SNAPSHOT [17/24][m
#14 304.8 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 304.8 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom
#14 304.8 Progress (1): 4.1/7.9 kB
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#14 304.9 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar (2.5 MB at 12 MB/s)
#14 305.1 [[1;34mINFO[m]
#14 305.1 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 305.1 [[1;34mINFO[m]
#14 305.1 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 305.1 [[1;34mINFO[m]
#14 305.1 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 305.1 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 305.1 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 305.1 [[1;34mINFO[m] Storing buildNumber: 97759247f805df5b65152cb5c1259c0fd79b0fe9 at timestamp: 1747268016686
#14 305.1 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 305.1 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 305.1
#14 305.1 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 305.1 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 305.1 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 305.1 [[1;34mINFO[m]
#14 305.1 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 305.1 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 305.1 [[1;34mINFO[m] Copying 3 resources
#14 305.1 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-plugins/lib
#14 305.1 [[1;34mINFO[m] Copying 0 resource
#14 305.1 [[1;34mINFO[m] Copying 0 resource
#14 305.1 [[1;34mINFO[m]
#14 305.1 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 305.1 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 305.1 [[1;34mINFO[m] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/classes
#14 305.6 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Some input files use or override a deprecated API.
#14 305.6 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Recompile with -Xlint:deprecation for details.
#14 305.6 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#14 305.6 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: Recompile with -Xlint:unchecked for details.
#14 305.6 [[1;34mINFO[m]
#14 305.6 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 305.6 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 305.6 [[1;34mINFO[m] Copying 1 resource
#14 305.6 [[1;34mINFO[m]
#14 305.6 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 305.6 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 305.6 [[1;34mINFO[m] Compiling 3 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/test-classes
#14 305.8 [[1;34mINFO[m]
#14 305.8 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 305.8 [[1;34mINFO[m]
#14 305.8 [[1;34mINFO[m] -------------------------------------------------------
#14 305.8 [[1;34mINFO[m] T E S T S
#14 305.8 [[1;34mINFO[m] -------------------------------------------------------
#14 305.9 [[1;34mINFO[m] Running [1mTestSuite[m
#14 307.2 Warning: Data has too many channels for Colorized color mode
#14 307.2 Warning: Data has too many channels for Colorized color mode
#14 307.3 Warning: Data has too many channels for Colorized color mode
#14 307.3 Warning: Data has too many channels for Colorized color mode
#14 307.4 Warning: Data has too many channels for Colorized color mode
#14 307.4 Warning: Data has too many channels for Colorized color mode
#14 307.4 Warning: Data has too many channels for Colorized color mode
#14 307.5 Warning: Data has too many channels for Colorized color mode
#14 307.5 Warning: Data has too many channels for Composite color mode
#14 307.5 Warning: Data has too many channels for Composite color mode
#14 307.8 Warning: Data has too many channels for Composite color mode
#14 307.8 Warning: Data has too many channels for Composite color mode
#14 307.9 Warning: Data has too many channels for Composite color mode
#14 307.9 Warning: Data has too many channels for Composite color mode
#14 307.9 Warning: Data has too many channels for Composite color mode
#14 307.9 Warning: Data has too many channels for Composite color mode
#14 307.9 Warning: Data has too many channels for Composite color mode
#14 307.9 Warning: Data has too many channels for Composite color mode
#14 307.9 Warning: Data has too many channels for Composite color mode
#14 307.9 Warning: Data has too many channels for Composite color mode
#14 307.9 Warning: Data has too many channels for Composite color mode
#14 307.9 Warning: Data has too many channels for Composite color mode
#14 307.9 Warning: Data has too many channels for Composite color mode
#14 307.9 Warning: Data has too many channels for Composite color mode
#14 307.9 Warning: Data has too many channels for Composite color mode
#14 308.0 Warning: Data has too many channels for Composite color mode
#14 308.3 Warning: Data has too many channels for Composite color mode
#14 308.3 Warning: Data has too many channels for Composite color mode
#14 308.3 Warning: Data has too many channels for Composite color mode
#14 308.3 Warning: Data has too many channels for Composite color mode
#14 308.3 Warning: Data has too many channels for Composite color mode
#14 308.3 Warning: Data has too many channels for Composite color mode
#14 308.3 Warning: Data has too many channels for Composite color mode
#14 308.3 Warning: Data has too many channels for Composite color mode
#14 308.3 Warning: Data has too many channels for Composite color mode
#14 308.3 Warning: Data has too many channels for Composite color mode
#14 308.3 Warning: Data has too many channels for Composite color mode
#14 308.3 Warning: Data has too many channels for Composite color mode
#14 308.3 Warning: Data has too many channels for Composite color mode
#14 308.4 Warning: Data has too many channels for Composite color mode
#14 308.4 Warning: Data has too many channels for Composite color mode
#14 308.4 Warning: Data has too many channels for Composite color mode
#14 308.4 Warning: Data has too many channels for Composite color mode
#14 308.4 Warning: Data has too many channels for Composite color mode
#14 308.7 Warning: Data has too many channels for Composite color mode
#14 308.7 Warning: Data has too many channels for Composite color mode
#14 308.7 Warning: Data has too many channels for Composite color mode
#14 308.7 Warning: Data has too many channels for Composite color mode
#14 308.8 Warning: Data has too many channels for Composite color mode
#14 308.8 Warning: Data has too many channels for Composite color mode
#14 308.8 Warning: Data has too many channels for Composite color mode
#14 308.8 Warning: Data has too many channels for Composite color mode
#14 308.8 Warning: Data has too many channels for Composite color mode
#14 308.8 Warning: Data has too many channels for Composite color mode
#14 308.8 Warning: Data has too many channels for Composite color mode
#14 308.8 Warning: Data has too many channels for Composite color mode
#14 308.8 Warning: Data has too many channels for Composite color mode
#14 308.8 Warning: Data has too many channels for Composite color mode
#14 308.8 Warning: Data has too many channels for Composite color mode
#14 308.9 Warning: Data has too many channels for Composite color mode
#14 309.2 Warning: Data has too many channels for Composite color mode
#14 309.2 Warning: Data has too many channels for Composite color mode
#14 309.2 Warning: Data has too many channels for Composite color mode
#14 309.2 Warning: Data has too many channels for Composite color mode
#14 309.2 Warning: Data has too many channels for Composite color mode
#14 309.2 Warning: Data has too many channels for Composite color mode
#14 309.2 Warning: Data has too many channels for Composite color mode
#14 309.3 Warning: Data has too many channels for Composite color mode
#14 309.3 Warning: Data has too many channels for Composite color mode
#14 309.3 Warning: Data has too many channels for Composite color mode
#14 309.3 Warning: Data has too many channels for Composite color mode
#14 309.3 Warning: Data has too many channels for Composite color mode
#14 309.3 Warning: Data has too many channels for Composite color mode
#14 309.3 Warning: Data has too many channels for Composite color mode
#14 309.3 Warning: Data has too many channels for Composite color mode
#14 309.3 Warning: Data has too many channels for Composite color mode
#14 309.4 Warning: Data has too many channels for Custom color mode
#14 309.4 Warning: Data has too many channels for Custom color mode
#14 309.4 Warning: Data has too many channels for Custom color mode
#14 309.4 Warning: Data has too many channels for Custom color mode
#14 309.5 Warning: Data has too many channels for Custom color mode
#14 309.5 Warning: Data has too many channels for Custom color mode
#14 309.5 Warning: Data has too many channels for Custom color mode
#14 309.5 Warning: Data has too many channels for Custom color mode
#14 309.5 Warning: Data has too many channels for Default color mode
#14 309.6 Warning: Data has too many channels for Default color mode
#14 309.6 Warning: Data has too many channels for Default color mode
#14 309.6 Warning: Data has too many channels for Default color mode
#14 309.6 Warning: Data has too many channels for Default color mode
#14 309.6 Warning: Data has too many channels for Default color mode
#14 309.7 Warning: Data has too many channels for Default color mode
#14 309.7 Warning: Data has too many channels for Default color mode
#14 309.7 Warning: Data has too many channels for Default color mode
#14 309.7 Warning: Data has too many channels for Default color mode
#14 309.8 Warning: Data has too many channels for Default color mode
#14 309.8 Warning: Data has too many channels for Default color mode
#14 309.8 Warning: Data has too many channels for Default color mode
#14 309.8 Warning: Data has too many channels for Default color mode
#14 309.9 Warning: Data has too many channels for Default color mode
#14 309.9 Warning: Data has too many channels for Default color mode
#14 309.9 Warning: Data has too many channels for Grayscale color mode
#14 309.9 Warning: Data has too many channels for Grayscale color mode
#14 309.9 Warning: Data has too many channels for Grayscale color mode
#14 310.0 Warning: Data has too many channels for Grayscale color mode
#14 310.0 Warning: Data has too many channels for Grayscale color mode
#14 310.0 Warning: Data has too many channels for Grayscale color mode
#14 310.0 Warning: Data has too many channels for Grayscale color mode
#14 310.1 Warning: Data has too many channels for Grayscale color mode
#14 310.1 Warning: Data has too many channels for Colorized color mode
#14 310.1 Warning: Data has too many channels for Colorized color mode
#14 310.1 Warning: Data has too many channels for Colorized color mode
#14 310.7 Warning: Data has too many channels for Default color mode
#14 310.9 [[1;34mINFO[m] [1;32mTests run: [0;1;32m30[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 4.969 s - in [1mTestSuite[m
#14 311.3 [[1;34mINFO[m]
#14 311.3 [[1;34mINFO[m] Results:
#14 311.3 [[1;34mINFO[m]
#14 311.3 [[1;34mINFO[m] [1;32mTests run: 30, Failures: 0, Errors: 0, Skipped: 0[m
#14 311.3 [[1;34mINFO[m]
#14 311.3 [[1;34mINFO[m]
#14 311.3 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 311.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#14 311.3 [[1;34mINFO[m]
#14 311.3 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m >>>[m
#14 311.3 [[1;34mINFO[m]
#14 311.3 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 311.3 [[1;34mINFO[m]
#14 311.3 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 311.3 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 311.3 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 311.3 [[1;34mINFO[m] Storing buildNumber: 97759247f805df5b65152cb5c1259c0fd79b0fe9 at timestamp: 1747268022886
#14 311.3 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 311.3 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 311.3
#14 311.3 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 311.3 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 311.3 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 311.3 [[1;34mINFO[m]
#14 311.3 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m <<<[m
#14 311.3 [[1;34mINFO[m]
#14 311.3 [[1;34mINFO[m]
#14 311.3 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 311.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar
#14 311.3 [[1;34mINFO[m]
#14 311.3 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 311.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar
#14 311.4 [[1;34mINFO[m]
#14 311.4 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 311.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#14 311.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#14 311.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar
#14 311.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar
#14 311.4 [[1;34mINFO[m]
#14 311.4 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bio-formats-tools[0;1m >------------------------[m
#14 311.4 [[1;34mINFO[m] [1mBuilding Bio-Formats command line tools 8.2.0-SNAPSHOT [18/24][m
#14 311.4 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 311.4 [[1;34mINFO[m]
#14 311.4 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats-tools[0;1m ---[m
#14 311.4 [[1;34mINFO[m]
#14 311.4 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 311.4 [[1;34mINFO[m]
#14 311.4 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 311.4 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 311.4 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 311.4 [[1;34mINFO[m] Storing buildNumber: 97759247f805df5b65152cb5c1259c0fd79b0fe9 at timestamp: 1747268022976
#14 311.4 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 311.4 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 311.4
#14 311.4 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 311.4 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 311.4 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 311.4 [[1;34mINFO[m]
#14 311.4 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 311.4 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 311.4 [[1;34mINFO[m] Copying 0 resource
#14 311.4 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-tools/lib
#14 311.4 [[1;34mINFO[m] Copying 0 resource
#14 311.4 [[1;34mINFO[m] Copying 0 resource
#14 311.4 [[1;34mINFO[m]
#14 311.4 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 311.4 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 311.4 [[1;34mINFO[m] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/target/classes
#14 311.6 [[1;34mINFO[m]
#14 311.6 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 311.6 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 311.6 [[1;34mINFO[m] Copying 1 resource
#14 311.6 [[1;34mINFO[m]
#14 311.6 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 311.6 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 311.6 [[1;34mINFO[m] Compiling 1 source file to /bio-formats-build/bioformats/components/bio-formats-tools/target/test-classes
#14 311.7 [[1;34mINFO[m]
#14 311.7 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats-tools[0;1m ---[m
#14 311.7 [[1;34mINFO[m]
#14 311.7 [[1;34mINFO[m] -------------------------------------------------------
#14 311.7 [[1;34mINFO[m] T E S T S
#14 311.7 [[1;34mINFO[m] -------------------------------------------------------
#14 311.9 [[1;34mINFO[m] Running loci.formats.tools.[1mImageConverterTest[m
#14 402.1 [[1;34mINFO[m] [1;32mTests run: [0;1;32m55[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 90.175 s - in loci.formats.tools.[1mImageConverterTest[m
#14 402.4 [[1;34mINFO[m]
#14 402.4 [[1;34mINFO[m] Results:
#14 402.4 [[1;34mINFO[m]
#14 402.4 [[1;34mINFO[m] [1;32mTests run: 55, Failures: 0, Errors: 0, Skipped: 0[m
#14 402.4 [[1;34mINFO[m]
#14 402.4 [[1;34mINFO[m]
#14 402.4 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats-tools[0;1m ---[m
#14 402.4 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT.jar
#14 402.4 [[1;34mINFO[m]
#14 402.4 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m >>>[m
#14 402.4 [[1;34mINFO[m]
#14 402.4 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 402.4 [[1;34mINFO[m]
#14 402.4 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 402.4 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 402.4 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 402.4 [[1;34mINFO[m] Storing buildNumber: 97759247f805df5b65152cb5c1259c0fd79b0fe9 at timestamp: 1747268114023
#14 402.4 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 402.4 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 402.4
#14 402.4 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 402.4 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 402.4 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 402.4 [[1;34mINFO[m]
#14 402.4 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m <<<[m
#14 402.4 [[1;34mINFO[m]
#14 402.4 [[1;34mINFO[m]
#14 402.4 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 402.4 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-sources.jar
#14 402.4 [[1;34mINFO[m]
#14 402.4 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 402.5 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-tests.jar
#14 402.5 [[1;34mINFO[m]
#14 402.5 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats-tools[0;1m ---[m
#14 402.5 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#14 402.5 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#14 402.5 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT-sources.jar
#14 402.5 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT-tests.jar
#14 402.5 [[1;34mINFO[m]
#14 402.5 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bioformats_package[0;1m >-----------------------[m
#14 402.5 [[1;34mINFO[m] [1mBuilding bioformats_package bundle 8.2.0-SNAPSHOT [19/24][m
#14 402.5 [[1;34mINFO[m] [1m--------------------------------[ pom ]---------------------------------[m
#14 402.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.pom
#14 402.5 Progress (1): 4.1/16 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.pom (16 kB at 574 kB/s)
#14 402.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.jar
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#14 402.5 [[1;34mINFO[m]
#14 402.5 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbioformats_package[0;1m ---[m
#14 402.5 [[1;34mINFO[m]
#14 402.5 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbioformats_package[0;1m ---[m
#14 402.5 [[1;34mINFO[m]
#14 402.5 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbioformats_package[0;1m ---[m
#14 402.5 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 402.5 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 402.5 [[1;34mINFO[m] Storing buildNumber: 97759247f805df5b65152cb5c1259c0fd79b0fe9 at timestamp: 1747268114142
#14 402.6 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 402.6 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 402.6
#14 402.6 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 402.6 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 402.6 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 402.6 [[1;34mINFO[m]
#14 402.6 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbioformats_package[0;1m >>>[m
#14 402.6 [[1;34mINFO[m]
#14 402.6 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbioformats_package[0;1m ---[m
#14 402.6 [[1;34mINFO[m]
#14 402.6 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbioformats_package[0;1m ---[m
#14 402.6 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 402.6 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 402.6 [[1;34mINFO[m] Storing buildNumber: 97759247f805df5b65152cb5c1259c0fd79b0fe9 at timestamp: 1747268114160
#14 402.6 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 402.6 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 402.6
#14 402.6 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 402.6 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 402.6 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 402.6 [[1;34mINFO[m]
#14 402.6 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbioformats_package[0;1m <<<[m
#14 402.6 [[1;34mINFO[m]
#14 402.6 [[1;34mINFO[m]
#14 402.6 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbioformats_package[0;1m ---[m
#14 402.6 [[1;34mINFO[m]
#14 402.6 [[1;34mINFO[m] [1m--- [0;32mmaven-assembly-plugin:3.1.0:single[m [1m(make-assembly)[m @ [36mbioformats_package[0;1m ---[m
#14 402.6 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-t
#14 402.6 [output clipped, log limit 2MiB reached]
#14 519.5 SLF4J: No SLF4J providers were found.
#14 519.5 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 519.5 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 520.0 WARNING: A Java agent has been loaded dynamically (/home/build/.m2/repository/net/bytebuddy/byte-buddy-agent/1.10.19/byte-buddy-agent-1.10.19.jar)
#14 520.0 WARNING: If a serviceability tool is in use, please run with -XX:+EnableDynamicAgentLoading to hide this warning
#14 520.0 WARNING: If a serviceability tool is not in use, please run with -Djdk.instrument.traceUsage for more information
#14 520.0 WARNING: Dynamic loading of agents will be disallowed by default in a future release
#14 DONE 528.2s
#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.0s
#16 [12/13] RUN ant jars tools
#16 0.315 Buildfile: /bio-formats-build/bioformats/build.xml
#16 1.580 [echo] isSnapshot = true
#16 1.698
#16 1.698 copy-jars:
#16 1.698
#16 1.698 deps-formats-api:
#16 1.789 [echo] isSnapshot = true
#16 1.851
#16 1.851 install-pom:
#16 2.044 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/pom-bio-formats-8.2.0-SNAPSHOT.pom
#16 2.054 [resolver:install] Installing ome:pom-bio-formats:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 2.058 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 2.060
#16 2.060 jar-formats-api:
#16 2.180 [echo] isSnapshot = true
#16 2.347
#16 2.347 init-title:
#16 2.347 [echo] ----------=========== formats-api ===========----------
#16 2.347
#16 2.347 init-timestamp:
#16 2.354
#16 2.354 init:
#16 2.354
#16 2.354 copy-resources:
#16 2.355 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.369 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.371
#16 2.371 compile:
#16 2.554 [resolver:resolve] Resolving artifacts
#16 2.582 [javac] Compiling 54 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.803 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 2.803 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 2.803 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 2.803 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 3.404 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.404 [javac] import loci.common.ReflectedUniverse;
#16 3.404 [javac] ^
#16 3.704 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.704 [javac] int currentIndex = r.getCoreIndex();
#16 3.705 [javac] ^
#16 3.705 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.705 [javac] r.setCoreIndex(coreIndex);
#16 3.705 [javac] ^
#16 3.705 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.705 [javac] r.setCoreIndex(currentIndex);
#16 3.705 [javac] ^
#16 3.805 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.805 [javac] public void setCoreIndex(int no) {
#16 3.805 [javac] ^
#16 3.805 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.806 [javac] public int getCoreIndex() {
#16 3.806 [javac] ^
#16 3.806 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.806 [javac] public int coreIndexToSeries(int index)
#16 3.806 [javac] ^
#16 3.806 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.806 [javac] public int seriesToCoreIndex(int series)
#16 3.806 [javac] ^
#16 3.806 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.806 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 3.806 [javac] ^
#16 3.907 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.907 [javac] if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 3.907 [javac] ^
#16 3.907 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.907 [javac] if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 3.907 [javac] ^
#16 3.907 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.907 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 3.907 [javac] ^
#16 3.907 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.907 [javac] core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 3.907 [javac] ^
#16 4.008 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:266: warning: [deprecation] URL(String) in URL has been deprecated
#16 4.008 [javac] Manifest manifest = new Manifest(new URL(manifestPath).openStream());
#16 4.008 [javac] ^
#16 4.008 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.008 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 4.008 [javac] ^
#16 4.008 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.008 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 4.008 [javac] ^
#16 4.108 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.109 [javac] public void setCoreIndex(int no) {
#16 4.109 [javac] ^
#16 4.109 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.109 [javac] public int getCoreIndex() {
#16 4.109 [javac] ^
#16 4.109 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.109 [javac] public int coreIndexToSeries(int index) {
#16 4.109 [javac] ^
#16 4.109 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.109 [javac] public int seriesToCoreIndex(int series) {
#16 4.109 [javac] ^
#16 4.109 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.109 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 4.109 [javac] ^
#16 4.109 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.110 [javac] return getReader().getCoreMetadataList();
#16 4.110 [javac] ^
#16 4.110 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.110 [javac] return getReader().getCoreIndex();
#16 4.110 [javac] ^
#16 4.110 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.110 [javac] getReader().setCoreIndex(no);
#16 4.110 [javac] ^
#16 4.110 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.110 [javac] return getReader().seriesToCoreIndex(series);
#16 4.110 [javac] ^
#16 4.110 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.110 [javac] return getReader().coreIndexToSeries(index);
#16 4.110 [javac] ^
#16 4.211 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.211 [javac] public void setCoreIndex(int no) {
#16 4.211 [javac] ^
#16 4.211 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.211 [javac] public int getCoreIndex() {
#16 4.211 [javac] ^
#16 4.211 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.211 [javac] public int coreIndexToSeries(int index) {
#16 4.211 [javac] ^
#16 4.211 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.211 [javac] public int seriesToCoreIndex(int series) {
#16 4.211 [javac] ^
#16 4.211 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.211 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 4.212 [javac] ^
#16 4.212 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.212 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 4.212 [javac] ^
#16 4.212 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.212 [javac] return reader.getCoreIndex();
#16 4.212 [javac] ^
#16 4.212 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.212 [javac] reader.setCoreIndex(no);
#16 4.212 [javac] ^
#16 4.212 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.212 [javac] return reader.seriesToCoreIndex(series);
#16 4.212 [javac] ^
#16 4.212 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.212 [javac] return reader.coreIndexToSeries(index);
#16 4.212 [javac] ^
#16 4.313 [javac] Note: Some input files use unchecked or unsafe operations.
#16 4.313 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 4.313 [javac] 40 warnings
#16 4.358
#16 4.358 formats-api.jar:
#16 4.358 [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 4.385 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 4.422 [resolver:install] Using default POM (ome:formats-api:8.2.0-SNAPSHOT)
#16 4.426 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.pom
#16 4.471 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.jar
#16 4.473 [resolver:install] Installing ome:formats-api:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 4.475 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 4.476
#16 4.476 deps-turbojpeg:
#16 4.476
#16 4.476 jar-turbojpeg:
#16 4.583 [echo] isSnapshot = true
#16 4.737
#16 4.737 init-title:
#16 4.737 [echo] ----------=========== turbojpeg ===========----------
#16 4.737
#16 4.737 init-timestamp:
#16 4.737
#16 4.737 init:
#16 4.737
#16 4.737 copy-resources:
#16 4.738 [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 4.739
#16 4.739 compile:
#16 4.748 [resolver:resolve] Resolving artifacts
#16 4.751 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 4.954 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 4.954 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 4.954 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 4.954 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 5.655 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 5.655 [javac] protected void finalize() throws Throwable {
#16 5.655 [javac] ^
#16 5.655 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 5.655 [javac] super.finalize();
#16 5.655 [javac] ^
#16 5.655 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 5.656 [javac] protected void finalize() throws Throwable {
#16 5.656 [javac] ^
#16 5.656 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 5.656 [javac] super.finalize();
#16 5.656 [javac] ^
#16 5.685 [javac] 8 warnings
#16 5.685
#16 5.685 jar:
#16 5.689 [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 5.880 [resolver:install] Using default POM (ome:turbojpeg:8.2.0-SNAPSHOT)
#16 5.887 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.pom
#16 5.902 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar
#16 5.905 [resolver:install] Installing ome:turbojpeg:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 5.908 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 5.909
#16 5.909 deps-formats-bsd:
#16 5.909
#16 5.909 jar-formats-bsd:
#16 6.043 [echo] isSnapshot = true
#16 6.184
#16 6.184 init-title:
#16 6.184 [echo] ----------=========== formats-bsd ===========----------
#16 6.184
#16 6.184 init-timestamp:
#16 6.185
#16 6.185 init:
#16 6.185
#16 6.185 copy-resources:
#16 6.185 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.188 [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.189
#16 6.189 compile:
#16 6.407 [resolver:resolve] Resolving artifacts
#16 6.436 [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.645 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 6.645 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 6.645 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 6.645 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 7.846 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 7.846 [javac] import loci.common.ReflectedUniverse;
#16 7.846 [javac] ^
#16 8.247 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.247 [javac] core.size() != reader.getCoreMetadataList().size())
#16 8.247 [javac] ^
#16 8.247 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.247 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 8.247 [javac] ^
#16 8.247 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.247 [javac] int n = reader.getCoreMetadataList().size();
#16 8.247 [javac] ^
#16 8.247 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 8.247 [javac] reader.setCoreIndex(coreIndex);
#16 8.247 [javac] ^
#16 8.247 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.247 [javac] int n = reader.getCoreMetadataList().size();
#16 8.247 [javac] ^
#16 8.248 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.248 [javac] int n = reader.getCoreMetadataList().size();
#16 8.248 [javac] ^
#16 8.248 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 8.248 [javac] if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 8.248 [javac] ^
#16 8.248 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.248 [javac] int n = reader.getCoreMetadataList().size();
#16 8.248 [javac] ^
#16 8.248 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 8.248 [javac] if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 8.248 [javac] ^
#16 8.249 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.249 [javac] int n = reader.getCoreMetadataList().size();
#16 8.249 [javac] ^
#16 8.249 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 8.249 [javac] if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 8.249 [javac] ^
#16 8.249 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 8.249 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 8.249 [javac] ^
#16 8.249 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 8.249 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 8.249 [javac] ^
#16 8.249 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.249 [javac] return noStitch ? reader.getCoreMetadataList() : core;
#16 8.249 [javac] ^
#16 8.249 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.249 [javac] if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 8.249 [javac] ^
#16 8.249 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.249 [javac] seriesCount = reader.getCoreMetadataList().size();
#16 8.249 [javac] ^
#16 8.250 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.250 [javac] if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 8.250 [javac] ^
#16 8.250 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.250 [javac] if (reader.getCoreMetadataList().size() > 1) return 0;
#16 8.250 [javac] ^
#16 8.250 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.250 [javac] r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 8.250 [javac] ^
#16 8.350 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.350 [javac] int seriesCount = unwrap().getCoreMetadataList().size();
#16 8.351 [javac] ^
#16 8.451 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:230: warning: [deprecation] URL(String) in URL has been deprecated
#16 8.451 [javac] URLConnection conn = new URL(query.toString()).openConnection();
#16 8.451 [javac] ^
#16 8.451 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:314: warning: [deprecation] URL(String) in URL has been deprecated
#16 8.451 [javac] URL url = new URL(urlPath);
#16 8.451 [javac] ^
#16 8.551 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 8.551 [javac] BitWriter out = new BitWriter();
#16 8.551 [javac] ^
#16 8.551 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 8.551 [javac] BitWriter out = new BitWriter();
#16 8.552 [javac] ^
#16 8.652 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 8.652 [javac] return new Double(v);
#16 8.652 [javac] ^
#16 9.253 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2106: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 9.253 [javac] return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#16 9.253 [javac] ^
#16 9.253 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2113: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 9.253 [javac] return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#16 9.253 [javac] ^
#16 9.253 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2120: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 9.253 [javac] return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#16 9.253 [javac] ^
#16 9.354 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 9.354 [javac] channelNames.put(new Integer(channelNames.size()), value);
#16 9.354 [javac] ^
#16 9.554 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:618: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.554 [javac] OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 9.554 [javac] ^
#16 9.554 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 9.554 [javac] StreamTokenizer st = new StreamTokenizer(in);
#16 9.554 [javac] ^
#16 9.654 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.654 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 9.654 [javac] ^
#16 9.655 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 9.655 [javac] protected ReflectedUniverse r;
#16 9.655 [javac] ^
#16 9.655 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 9.655 [javac] r = new ReflectedUniverse();
#16 9.655 [javac] ^
#16 9.755 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1043: warning: [deprecation] NM in UNITS has been deprecated
#16 9.755 [javac] wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 9.755 [javac] ^
#16 9.755 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1075: warning: [deprecation] MM in UNITS has been deprecated
#16 9.755 [javac] sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 9.755 [javac] ^
#16 9.755 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1088: warning: [deprecation] MM in UNITS has been deprecated
#16 9.755 [javac] String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 9.755 [javac] ^
#16 9.756 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1089: warning: [deprecation] MM in UNITS has been deprecated
#16 9.756 [javac] String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 9.756 [javac] ^
#16 9.756 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1108: warning: [deprecation] MM in UNITS has been deprecated
#16 9.756 [javac] volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 9.756 [javac] ^
#16 9.756 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1112: warning: [deprecation] MM in UNITS has been deprecated
#16 9.756 [javac] volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 9.756 [javac] ^
#16 9.756 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1118: warning: [deprecation] MM in UNITS has been deprecated
#16 9.756 [javac] volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 9.756 [javac] ^
#16 9.756 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1166: warning: [deprecation] MM in UNITS has been deprecated
#16 9.756 [javac] offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 9.756 [javac] ^
#16 9.756 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1170: warning: [deprecation] MM in UNITS has been deprecated
#16 9.756 [javac] offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 9.756 [javac] ^
#16 9.756 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 9.756 [javac] ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 9.756 [javac] ^
#16 9.756 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 9.756 [javac] ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 9.756 [javac] ^
#16 9.756 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 9.756 [javac] ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 9.756 [javac] ^
#16 9.756 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 9.757 [javac] ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 9.757 [javac] ^
#16 9.857 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 9.857 [javac] libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 9.857 [javac] ^
#16 9.857 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:320: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 9.857 [javac] doubleResult[i] = new Double(result.get(i).doubleValue());
#16 9.857 [javac] ^
#16 9.857 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:342: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 9.857 [javac] result[i] = new Double(readNumber().doubleValue());
#16 9.857 [javac] ^
#16 9.857 [javac] Note: Some input files use unchecked or unsafe operations.
#16 9.857 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 9.857 [javac] 55 warnings
#16 9.895
#16 9.895 formats-bsd.jar:
#16 9.904 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 10.03 [resolver:install] Using default POM (ome:formats-bsd:8.2.0-SNAPSHOT)
#16 10.03 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.pom
#16 10.04 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar
#16 10.04 [resolver:install] Installing ome:formats-bsd:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 10.04 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 10.04
#16 10.04 deps-formats-gpl:
#16 10.04
#16 10.04 jar-formats-gpl:
#16 10.14 [echo] isSnapshot = true
#16 10.28
#16 10.28 init-title:
#16 10.28 [echo] ----------=========== formats-gpl ===========----------
#16 10.28
#16 10.28 init-timestamp:
#16 10.28
#16 10.28 init:
#16 10.28
#16 10.28 copy-resources:
#16 10.28 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 10.28 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 10.28
#16 10.28 compile:
#16 10.67 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 10.98 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 11.54 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom (0 B at 0.0 KB/sec)
#16 11.55 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 11.57 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 11.84 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom (0 B at 0.0 KB/sec)
#16 11.86 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 11.87 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 12.14 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom (0 B at 0.0 KB/sec)
#16 12.19 [resolver:resolve] Resolving artifacts
#16 12.20 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 12.20 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 12.24 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 12.24 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 12.38 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (0 B at 0.0 KB/sec)
#16 12.65 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (0 B at 0.0 KB/sec)
#16 12.67 [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 12.88 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 12.88 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 12.88 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 12.88 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 14.08 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 14.08 [javac] import loci.formats.codec.BitWriter;
#16 14.08 [javac] ^
#16 14.18 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 14.18 [javac] import loci.formats.codec.BitWriter;
#16 14.18 [javac] ^
#16 16.08 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 16.08 [javac] LOGGER.trace("Parsing tokens: {}", tokens);
#16 16.08 [javac] ^
#16 16.08 [javac] cast to Object for a varargs call
#16 16.08 [javac] cast to Object[] for a non-varargs call and to suppress this warning
#16 16.08 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1269: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 16.08 [javac] BitWriter bits = null;
#16 16.08 [javac] ^
#16 16.08 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1271: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 16.08 [javac] bits = new BitWriter(planes[index].length / 8);
#16 16.08 [javac] ^
#16 16.48 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 16.48 [javac] CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 16.48 [javac] ^
#16 16.88 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 16.88 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 16.88 [javac] ^
#16 16.88 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 16.88 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 16.88 [javac] ^
#16 17.18 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:170: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 17.18 [javac] Variable variable = group.findVariable(variableName);
#16 17.18 [javac] ^
#16 17.18 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:197: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 17.18 [javac] Variable variable = group.findVariable(variableName);
#16 17.18 [javac] ^
#16 17.18 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:200: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 17.18 [javac] List<Attribute> attributes = variable.getAttributes();
#16 17.18 [javac] ^
#16 17.18 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getName() in CDMNode has been deprecated
#16 17.18 [javac] String groupName = group.getName();
#16 17.19 [javac] ^
#16 17.19 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:239: warning: [deprecation] getAttributes() in Group has been deprecated
#16 17.19 [javac] List<Attribute> attributes = group.getAttributes();
#16 17.19 [javac] ^
#16 17.19 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:247: warning: [deprecation] getName() in CDMNode has been deprecated
#16 17.19 [javac] String variableName = variable.getName();
#16 17.19 [javac] ^
#16 17.19 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:270: warning: [deprecation] findGroup(String) in Group has been deprecated
#16 17.19 [javac] Group nextParent = parent.findGroup(token);
#16 17.19 [javac] ^
#16 17.19 [javac] Note: Some input files use unchecked or unsafe operations.
#16 17.19 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 17.19 [javac] 19 warnings
#16 17.19
#16 17.19 formats-gpl.jar:
#16 17.20 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 17.37 [resolver:install] Using default POM (ome:formats-gpl:8.2.0-SNAPSHOT)
#16 17.37 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#16 17.37 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#16 17.37 [resolver:install] Installing ome:formats-gpl:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 17.38 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 17.38
#16 17.38 deps-bio-formats-plugins:
#16 17.38
#16 17.38 jar-bio-formats-plugins:
#16 17.48 [echo] isSnapshot = true
#16 17.62
#16 17.62 init-title:
#16 17.62 [echo] ----------=========== bio-formats_plugins ===========----------
#16 17.62
#16 17.62 init-timestamp:
#16 17.62
#16 17.62 init:
#16 17.62
#16 17.62 copy-resources:
#16 17.62 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 17.62 [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 17.62
#16 17.62 compile:
#16 17.89 [resolver:resolve] Resolving artifacts
#16 17.91 [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.12 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 18.12 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 18.12 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 18.12 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 18.92 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.92 [javac] import loci.common.ReflectedUniverse;
#16 18.92 [javac] ^
#16 19.02 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.02 [javac] import loci.common.ReflectedUniverse;
#16 19.02 [javac] ^
#16 19.42 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 19.42 [javac] "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 19.42 [javac] ^
#16 19.52 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/InstallWizard.java:119: warning: [deprecation] URL(String) in URL has been deprecated
#16 19.52 [javac] URL url = new URL(urlPath);
#16 19.52 [javac] ^
#16 19.52 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.52 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 19.52 [javac] ^
#16 19.52 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.52 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 19.52 [javac] ^
#16 19.72 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.72 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 19.72 [javac] ^
#16 19.72 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.72 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 19.72 [javac] ^
#16 19.92 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/shortcut/ShortcutPanel.java:102: warning: [deprecation] URL(String) in URL has been deprecated
#16 19.92 [javac] url = new URL(path);
#16 19.92 [javac] ^
#16 20.07 [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 20.07 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 20.07 [javac] 13 warnings
#16 20.08
#16 20.08 bio-formats-plugins.jar:
#16 20.08 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 20.11 [resolver:install] Using default POM (ome:bio-formats_plugins:8.2.0-SNAPSHOT)
#16 20.12 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#16 20.14 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#16 20.14 [resolver:install] Installing ome:bio-formats_plugins:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 20.14 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 20.14
#16 20.14 deps-bio-formats-tools:
#16 20.14
#16 20.14 jar-bio-formats-tools:
#16 20.24 [echo] isSnapshot = true
#16 20.38
#16 20.38 init-title:
#16 20.38 [echo] ----------=========== bio-formats-tools ===========----------
#16 20.38
#16 20.38 init-timestamp:
#16 20.38
#16 20.38 init:
#16 20.38
#16 20.38 copy-resources:
#16 20.38 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 20.38
#16 20.38 compile:
#16 20.67 [resolver:resolve] Resolving artifacts
#16 20.68 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 20.89 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 20.89 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 20.89 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 20.89 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 22.07 [javac] 4 warnings
#16 22.07
#16 22.07 bio-formats-tools.jar:
#16 22.07 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 22.08 [resolver:install] Using default POM (ome:bio-formats-tools:8.2.0-SNAPSHOT)
#16 22.08 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#16 22.09 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#16 22.09 [resolver:install] Installing ome:bio-formats-tools:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 22.09 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 22.09
#16 22.09 deps-tests:
#16 22.09
#16 22.09 jar-tests:
#16 22.19 [echo] isSnapshot = true
#16 22.32
#16 22.32 init-title:
#16 22.32 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 22.32
#16 22.32 init-timestamp:
#16 22.32
#16 22.32 init:
#16 22.32
#16 22.32 copy-resources:
#16 22.32 [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 22.32
#16 22.32 compile:
#16 22.62 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 22.69 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 22.69 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.11 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.53 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#16 23.54 [resolver:resolve] Resolving artifacts
#16 23.55 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 23.59 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 23.60 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.00 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.27 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 24.28 [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 24.48 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 24.48 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 24.48 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 24.48 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 25.59 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:605: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 25.59 [javac] int index = unflattenedReader.getCoreIndex();
#16 25.59 [javac] ^
#16 25.59 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:606: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 25.59 [javac] reader.setCoreIndex(index);
#16 25.59 [javac] ^
#16 25.79 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2263: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 25.79 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 25.79 [javac] ^
#16 25.79 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2429: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 25.79 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 25.79 [javac] ^
#16 26.09 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 26.09 [javac] FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 26.09 [javac] ^
#16 26.09 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 26.09 [javac] FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 26.09 [javac] ^
#16 26.14 [javac] Note: Some input files use unchecked or unsafe operations.
#16 26.14 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 26.14 [javac] 10 warnings
#16 26.14
#16 26.14 tests.jar:
#16 26.14 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 26.16 [resolver:install] Using default POM (ome:test-suite:8.2.0-SNAPSHOT)
#16 26.16 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.pom
#16 26.16 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.jar
#16 26.16 [resolver:install] Installing ome:test-suite:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 26.17 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 26.17
#16 26.17 jars:
#16 26.17
#16 26.17 copy-jars:
#16 26.17
#16 26.17 deps-formats-api:
#16 26.21 [echo] isSnapshot = true
#16 26.26
#16 26.26 install-pom:
#16 26.42 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/pom-bio-formats-8.2.0-SNAPSHOT.pom
#16 26.42 [resolver:install] Installing ome:pom-bio-formats:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 26.42 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 26.42
#16 26.42 jar-formats-api:
#16 26.51 [echo] isSnapshot = true
#16 26.64
#16 26.64 init-title:
#16 26.64 [echo] ----------=========== formats-api ===========----------
#16 26.64
#16 26.64 init-timestamp:
#16 26.64
#16 26.64 init:
#16 26.64
#16 26.64 copy-resources:
#16 26.64
#16 26.64 compile:
#16 26.77 [resolver:resolve] Resolving artifacts
#16 26.78
#16 26.78 formats-api.jar:
#16 26.80 [resolver:install] Using default POM (ome:formats-api:8.2.0-SNAPSHOT)
#16 26.80 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.pom
#16 26.80 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.jar
#16 26.80 [resolver:install] Installing ome:formats-api:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 26.80 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 26.80
#16 26.80 deps-turbojpeg:
#16 26.80
#16 26.80 jar-turbojpeg:
#16 26.89 [echo] isSnapshot = true
#16 27.03
#16 27.03 init-title:
#16 27.03 [echo] ----------=========== turbojpeg ===========----------
#16 27.03
#16 27.03 init-timestamp:
#16 27.03
#16 27.03 init:
#16 27.03
#16 27.03 copy-resources:
#16 27.03
#16 27.03 compile:
#16 27.03 [resolver:resolve] Resolving artifacts
#16 27.04
#16 27.04 jar:
#16 27.04 [resolver:install] Using default POM (ome:turbojpeg:8.2.0-SNAPSHOT)
#16 27.05 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.pom
#16 27.05 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar
#16 27.05 [resolver:install] Installing ome:turbojpeg:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 27.05 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 27.06
#16 27.06 deps-formats-bsd:
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#16 27.14 [echo] isSnapshot = true
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#16 27.26 [echo] ----------=========== formats-bsd ===========----------
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#16 27.47 [resolver:resolve] Resolving artifacts
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#16 27.49 formats-bsd.jar:
#16 27.53 [resolver:install] Using default POM (ome:formats-bsd:8.2.0-SNAPSHOT)
#16 27.53 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.pom
#16 27.53 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar
#16 27.53 [resolver:install] Installing ome:formats-bsd:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 27.54 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 27.54
#16 27.54 deps-formats-gpl:
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#16 27.75 [echo] ----------=========== formats-gpl ===========----------
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#16 28.04 [resolver:install] Using default POM (ome:formats-gpl:8.2.0-SNAPSHOT)
#16 28.04 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#16 28.04 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#16 28.04 [resolver:install] Installing ome:formats-gpl:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 28.05 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
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#16 28.05 deps-bio-formats-plugins:
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#16 28.26 [echo] ----------=========== bio-formats_plugins ===========----------
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#16 28.55 [resolver:install] Using default POM (ome:bio-formats_plugins:8.2.0-SNAPSHOT)
#16 28.55 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#16 28.55 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#16 28.56 [resolver:install] Installing ome:bio-formats_plugins:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 28.56 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 28.56
#16 28.56 deps-bio-formats-tools:
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#16 28.56 jar-bio-formats-tools:
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#16 28.78 [echo] ----------=========== bio-formats-tools ===========----------
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#16 29.04 [resolver:install] Using default POM (ome:bio-formats-tools:8.2.0-SNAPSHOT)
#16 29.04 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#16 29.05 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#16 29.05 [resolver:install] Installing ome:bio-formats-tools:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 29.05 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
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#16 29.05 deps-tests:
#16 29.05
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#16 29.27
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#16 29.27 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 29.27
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#16 29.27
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#16 29.58
#16 29.58 tests.jar:
#16 29.58 [resolver:install] Using default POM (ome:test-suite:8.2.0-SNAPSHOT)
#16 29.59 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.pom
#16 29.59 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.jar
#16 29.59 [resolver:install] Installing ome:test-suite:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 29.59 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 29.59
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#16 29.59
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#16 29.59 [echo] ----------=========== bioformats_package ===========----------
#16 29.68 [echo] isSnapshot = true
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#16 30.07 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.11 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.26-SNAPSHOT/ome-common-6.0.26-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.13 [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.16 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.17 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 30.33 [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 30.61 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.67 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.69 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.76 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.77 [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.79 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.79 [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.7/joda-time-2.12.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.99 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.1-jre/guava-32.0.1-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 32.06 [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.15 [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 35.28 [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.29 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.30 [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.33 [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.81 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.15/logback-core-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.94 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.15/logback-classic-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.41 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 43.91 [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 44.70 [resolver:install] Using default POM (ome:bioformats_package:8.2.0-SNAPSHOT)
#16 44.71 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/bioformats_package-8.2.0-SNAPSHOT.pom
#16 44.71 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/bioformats_package-8.2.0-SNAPSHOT.jar
#16 44.75 [resolver:install] Installing ome:bioformats_package:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 44.76 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 44.76
#16 44.76 BUILD SUCCESSFUL
#16 44.76 Total time: 44 seconds
#16 DONE 45.3s
#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.1s
#18 exporting to image
#18 exporting layers
#18 exporting layers 4.0s done
#18 writing image sha256:0ec6b82d999650f7721eaaf043beb9a224d9fa2237702ac43c60ac11b5758c7b done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 4.2s
[33m1 warning found (use docker --debug to expand):
[0m - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS
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