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#14 601.1 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#14 601.1 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
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Downloaded from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (80 kB at 100 kB/s)
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Downloaded from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (4.3 MB at 24 kB/s)
#14 782.2 [[1;34mINFO[m]
#14 782.2 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mformats-gpl[0;1m ---[m
#14 782.2 [[1;34mINFO[m]
#14 782.2 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mformats-gpl[0;1m ---[m
#14 782.2 [[1;34mINFO[m]
#14 782.2 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 782.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 782.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 782.2 [[1;34mINFO[m] Storing buildNumber: 55487859c47c6e07764f09ec713aa9dc192b5a3a at timestamp: 1749708004263
#14 782.2 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 782.2 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 782.2
#14 782.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 782.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 782.2 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 782.2 [[1;34mINFO[m]
#14 782.2 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mformats-gpl[0;1m ---[m
#14 782.2 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 782.2 [[1;34mINFO[m] Copying 2 resources
#14 782.2 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/formats-gpl/lib
#14 782.2 [[1;34mINFO[m] Copying 0 resource
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#14 782.2 [[1;34mINFO[m]
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#14 782.2 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 782.2 [[1;34mINFO[m] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-gpl/target/classes
#14 784.5 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Some input files use or override a deprecated API.
#14 784.5 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Recompile with -Xlint:deprecation for details.
#14 784.5 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Some input files use unchecked or unsafe operations.
#14 784.5 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Recompile with -Xlint:unchecked for details.
#14 784.5 [[1;34mINFO[m]
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#14 784.5 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 784.5 [[1;34mINFO[m] Copying 24 resources
#14 784.5 [[1;34mINFO[m]
#14 784.5 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mformats-gpl[0;1m ---[m
#14 784.5 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 784.5 [[1;34mINFO[m] Compiling 23 source files to /bio-formats-build/bioformats/components/formats-gpl/target/test-classes
#14 784.7 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java uses unchecked or unsafe operations.
#14 784.7 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: Recompile with -Xlint:unchecked for details.
#14 784.7 [[1;34mINFO[m]
#14 784.7 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mformats-gpl[0;1m ---[m
#14 784.7 [[1;34mINFO[m]
#14 784.7 [[1;34mINFO[m] -------------------------------------------------------
#14 784.7 [[1;34mINFO[m] T E S T S
#14 784.7 [[1;34mINFO[m] -------------------------------------------------------
#14 784.9 [[1;34mINFO[m] Running [1mTestSuite[m
#14 786.1 2025-06-12 06:00:08,145 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@24528a25 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 786.1 2025-06-12 06:00:08,148 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@46292372 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 786.1 2025-06-12 06:00:08,199 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@1f9d6c7b reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 786.1 2025-06-12 06:00:08,200 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@68ace111 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 786.2 2025-06-12 06:00:08,247 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@4c9e9fb8 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 786.2 2025-06-12 06:00:08,247 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@9ec531 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 786.2 2025-06-12 06:00:08,294 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@29006752 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 786.2 2025-06-12 06:00:08,294 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@534243e4 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 786.3 2025-06-12 06:00:08,339 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@2e647e59 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 786.3 2025-06-12 06:00:08,339 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@4bd2f0dc reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 786.3 2025-06-12 06:00:08,400 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@6bff19ff reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 786.3 2025-06-12 06:00:08,400 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@41e1455d reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 786.4 2025-06-12 06:00:08,447 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@35c09b94 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 786.4 2025-06-12 06:00:08,447 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@2d0bfb24 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 786.4 2025-06-12 06:00:08,489 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@59942b48 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 786.4 2025-06-12 06:00:08,489 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@1869f114 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 786.7 [[1;34mINFO[m] [1;32mTests run: [0;1;32m99[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.786 s - in [1mTestSuite[m
#14 787.0 [[1;34mINFO[m]
#14 787.0 [[1;34mINFO[m] Results:
#14 787.0 [[1;34mINFO[m]
#14 787.0 [[1;34mINFO[m] [1;32mTests run: 99, Failures: 0, Errors: 0, Skipped: 0[m
#14 787.0 [[1;34mINFO[m]
#14 787.0 [[1;34mINFO[m]
#14 787.0 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-mdb-test)[m @ [36mformats-gpl[0;1m ---[m
#14 787.0 [[1;34mINFO[m]
#14 787.0 [[1;34mINFO[m] -------------------------------------------------------
#14 787.0 [[1;34mINFO[m] T E S T S
#14 787.0 [[1;34mINFO[m] -------------------------------------------------------
#14 787.2 [[1;34mINFO[m] Running [1mTestSuite[m
#14 787.6 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.432 s - in [1mTestSuite[m
#14 787.9 [[1;34mINFO[m]
#14 787.9 [[1;34mINFO[m] Results:
#14 787.9 [[1;34mINFO[m]
#14 787.9 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 787.9 [[1;34mINFO[m]
#14 787.9 [[1;34mINFO[m]
#14 787.9 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-poi-test)[m @ [36mformats-gpl[0;1m ---[m
#14 788.0 [[1;34mINFO[m]
#14 788.0 [[1;34mINFO[m] -------------------------------------------------------
#14 788.0 [[1;34mINFO[m] T E S T S
#14 788.0 [[1;34mINFO[m] -------------------------------------------------------
#14 788.1 [[1;34mINFO[m] Running [1mTestSuite[m
#14 788.6 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.441 s - in [1mTestSuite[m
#14 788.9 [[1;34mINFO[m]
#14 788.9 [[1;34mINFO[m] Results:
#14 788.9 [[1;34mINFO[m]
#14 788.9 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 788.9 [[1;34mINFO[m]
#14 788.9 [[1;34mINFO[m]
#14 788.9 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-netcdf-test)[m @ [36mformats-gpl[0;1m ---[m
#14 788.9 [[1;34mINFO[m]
#14 788.9 [[1;34mINFO[m] -------------------------------------------------------
#14 788.9 [[1;34mINFO[m] T E S T S
#14 788.9 [[1;34mINFO[m] -------------------------------------------------------
#14 789.1 [[1;34mINFO[m] Running [1mTestSuite[m
#14 789.5 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.417 s - in [1mTestSuite[m
#14 789.8 [[1;34mINFO[m]
#14 789.8 [[1;34mINFO[m] Results:
#14 789.8 [[1;34mINFO[m]
#14 789.8 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 789.8 [[1;34mINFO[m]
#14 789.8 [[1;34mINFO[m]
#14 789.8 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mformats-gpl[0;1m ---[m
#14 789.8 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.3.0-SNAPSHOT.jar
#14 789.9 [[1;34mINFO[m]
#14 789.9 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m >>>[m
#14 789.9 [[1;34mINFO[m]
#14 789.9 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mformats-gpl[0;1m ---[m
#14 789.9 [[1;34mINFO[m]
#14 789.9 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 789.9 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 789.9 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 789.9 [[1;34mINFO[m] Storing buildNumber: 55487859c47c6e07764f09ec713aa9dc192b5a3a at timestamp: 1749708011919
#14 789.9 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 789.9 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 789.9
#14 789.9 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 789.9 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 789.9 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 789.9 [[1;34mINFO[m]
#14 789.9 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m <<<[m
#14 789.9 [[1;34mINFO[m]
#14 789.9 [[1;34mINFO[m]
#14 789.9 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 789.9 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.3.0-SNAPSHOT-sources.jar
#14 790.0 [[1;34mINFO[m]
#14 790.0 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 790.0 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.3.0-SNAPSHOT-tests.jar
#14 790.0 [[1;34mINFO[m]
#14 790.0 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mformats-gpl[0;1m ---[m
#14 790.0 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.3.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.jar
#14 790.0 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.pom
#14 790.0 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.3.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT-sources.jar
#14 790.0 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.3.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT-tests.jar
#14 790.0 [[1;34mINFO[m]
#14 790.0 [[1;34mINFO[m] [1m----------------------< [0;36mome:bio-formats_plugins[0;1m >-----------------------[m
#14 790.0 [[1;34mINFO[m] [1mBuilding Bio-Formats Plugins for ImageJ 8.3.0-SNAPSHOT [17/24][m
#14 790.0 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 790.0 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom
#14 790.0 Progress (1): 4.1/7.9 kB
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#14 790.0 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar (2.5 MB at 20 MB/s)
#14 790.2 [[1;34mINFO[m]
#14 790.2 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 790.2 [[1;34mINFO[m]
#14 790.2 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 790.2 [[1;34mINFO[m]
#14 790.2 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 790.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 790.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 790.2 [[1;34mINFO[m] Storing buildNumber: 55487859c47c6e07764f09ec713aa9dc192b5a3a at timestamp: 1749708012221
#14 790.2 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 790.2 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 790.2
#14 790.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 790.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 790.2 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 790.2 [[1;34mINFO[m]
#14 790.2 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 790.2 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 790.2 [[1;34mINFO[m] Copying 3 resources
#14 790.2 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-plugins/lib
#14 790.2 [[1;34mINFO[m] Copying 0 resource
#14 790.2 [[1;34mINFO[m] Copying 0 resource
#14 790.2 [[1;34mINFO[m]
#14 790.2 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 790.2 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 790.2 [[1;34mINFO[m] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/classes
#14 790.6 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Some input files use or override a deprecated API.
#14 790.6 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Recompile with -Xlint:deprecation for details.
#14 790.6 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#14 790.7 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: Recompile with -Xlint:unchecked for details.
#14 790.7 [[1;34mINFO[m]
#14 790.7 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 790.7 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 790.7 [[1;34mINFO[m] Copying 1 resource
#14 790.7 [[1;34mINFO[m]
#14 790.7 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 790.7 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 790.7 [[1;34mINFO[m] Compiling 3 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/test-classes
#14 790.8 [[1;34mINFO[m]
#14 790.8 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 790.8 [[1;34mINFO[m]
#14 790.8 [[1;34mINFO[m] -------------------------------------------------------
#14 790.8 [[1;34mINFO[m] T E S T S
#14 790.8 [[1;34mINFO[m] -------------------------------------------------------
#14 791.0 [[1;34mINFO[m] Running [1mTestSuite[m
#14 792.2 Warning: Data has too many channels for Colorized color mode
#14 792.2 Warning: Data has too many channels for Colorized color mode
#14 792.3 Warning: Data has too many channels for Colorized color mode
#14 792.3 Warning: Data has too many channels for Colorized color mode
#14 792.4 Warning: Data has too many channels for Colorized color mode
#14 792.4 Warning: Data has too many channels for Colorized color mode
#14 792.5 Warning: Data has too many channels for Colorized color mode
#14 792.5 Warning: Data has too many channels for Colorized color mode
#14 792.5 Warning: Data has too many channels for Composite color mode
#14 792.6 Warning: Data has too many channels for Composite color mode
#14 792.9 Warning: Data has too many channels for Composite color mode
#14 792.9 Warning: Data has too many channels for Composite color mode
#14 792.9 Warning: Data has too many channels for Composite color mode
#14 792.9 Warning: Data has too many channels for Composite color mode
#14 792.9 Warning: Data has too many channels for Composite color mode
#14 792.9 Warning: Data has too many channels for Composite color mode
#14 792.9 Warning: Data has too many channels for Composite color mode
#14 792.9 Warning: Data has too many channels for Composite color mode
#14 792.9 Warning: Data has too many channels for Composite color mode
#14 792.9 Warning: Data has too many channels for Composite color mode
#14 792.9 Warning: Data has too many channels for Composite color mode
#14 793.0 Warning: Data has too many channels for Composite color mode
#14 793.0 Warning: Data has too many channels for Composite color mode
#14 793.0 Warning: Data has too many channels for Composite color mode
#14 793.0 Warning: Data has too many channels for Composite color mode
#14 793.0 Warning: Data has too many channels for Composite color mode
#14 793.3 Warning: Data has too many channels for Composite color mode
#14 793.3 Warning: Data has too many channels for Composite color mode
#14 793.3 Warning: Data has too many channels for Composite color mode
#14 793.3 Warning: Data has too many channels for Composite color mode
#14 793.3 Warning: Data has too many channels for Composite color mode
#14 793.3 Warning: Data has too many channels for Composite color mode
#14 793.3 Warning: Data has too many channels for Composite color mode
#14 793.3 Warning: Data has too many channels for Composite color mode
#14 793.3 Warning: Data has too many channels for Composite color mode
#14 793.4 Warning: Data has too many channels for Composite color mode
#14 793.4 Warning: Data has too many channels for Composite color mode
#14 793.4 Warning: Data has too many channels for Composite color mode
#14 793.4 Warning: Data has too many channels for Composite color mode
#14 793.4 Warning: Data has too many channels for Composite color mode
#14 793.4 Warning: Data has too many channels for Composite color mode
#14 793.4 Warning: Data has too many channels for Composite color mode
#14 793.4 Warning: Data has too many channels for Composite color mode
#14 793.4 Warning: Data has too many channels for Composite color mode
#14 793.7 Warning: Data has too many channels for Composite color mode
#14 793.8 Warning: Data has too many channels for Composite color mode
#14 793.8 Warning: Data has too many channels for Composite color mode
#14 793.8 Warning: Data has too many channels for Composite color mode
#14 793.8 Warning: Data has too many channels for Composite color mode
#14 793.8 Warning: Data has too many channels for Composite color mode
#14 793.8 Warning: Data has too many channels for Composite color mode
#14 793.8 Warning: Data has too many channels for Composite color mode
#14 793.8 Warning: Data has too many channels for Composite color mode
#14 793.8 Warning: Data has too many channels for Composite color mode
#14 793.8 Warning: Data has too many channels for Composite color mode
#14 793.8 Warning: Data has too many channels for Composite color mode
#14 793.9 Warning: Data has too many channels for Composite color mode
#14 793.9 Warning: Data has too many channels for Composite color mode
#14 793.9 Warning: Data has too many channels for Composite color mode
#14 793.9 Warning: Data has too many channels for Composite color mode
#14 794.2 Warning: Data has too many channels for Composite color mode
#14 794.2 Warning: Data has too many channels for Composite color mode
#14 794.2 Warning: Data has too many channels for Composite color mode
#14 794.2 Warning: Data has too many channels for Composite color mode
#14 794.2 Warning: Data has too many channels for Composite color mode
#14 794.3 Warning: Data has too many channels for Composite color mode
#14 794.3 Warning: Data has too many channels for Composite color mode
#14 794.3 Warning: Data has too many channels for Composite color mode
#14 794.3 Warning: Data has too many channels for Composite color mode
#14 794.3 Warning: Data has too many channels for Composite color mode
#14 794.3 Warning: Data has too many channels for Composite color mode
#14 794.3 Warning: Data has too many channels for Composite color mode
#14 794.3 Warning: Data has too many channels for Composite color mode
#14 794.3 Warning: Data has too many channels for Composite color mode
#14 794.3 Warning: Data has too many channels for Composite color mode
#14 794.4 Warning: Data has too many channels for Composite color mode
#14 794.4 Warning: Data has too many channels for Custom color mode
#14 794.4 Warning: Data has too many channels for Custom color mode
#14 794.4 Warning: Data has too many channels for Custom color mode
#14 794.4 Warning: Data has too many channels for Custom color mode
#14 794.5 Warning: Data has too many channels for Custom color mode
#14 794.5 Warning: Data has too many channels for Custom color mode
#14 794.5 Warning: Data has too many channels for Custom color mode
#14 794.5 Warning: Data has too many channels for Custom color mode
#14 794.6 Warning: Data has too many channels for Default color mode
#14 794.6 Warning: Data has too many channels for Default color mode
#14 794.6 Warning: Data has too many channels for Default color mode
#14 794.6 Warning: Data has too many channels for Default color mode
#14 794.6 Warning: Data has too many channels for Default color mode
#14 794.7 Warning: Data has too many channels for Default color mode
#14 794.7 Warning: Data has too many channels for Default color mode
#14 794.7 Warning: Data has too many channels for Default color mode
#14 794.7 Warning: Data has too many channels for Default color mode
#14 794.8 Warning: Data has too many channels for Default color mode
#14 794.8 Warning: Data has too many channels for Default color mode
#14 794.8 Warning: Data has too many channels for Default color mode
#14 794.8 Warning: Data has too many channels for Default color mode
#14 794.8 Warning: Data has too many channels for Default color mode
#14 794.9 Warning: Data has too many channels for Default color mode
#14 794.9 Warning: Data has too many channels for Default color mode
#14 794.9 Warning: Data has too many channels for Grayscale color mode
#14 794.9 Warning: Data has too many channels for Grayscale color mode
#14 795.0 Warning: Data has too many channels for Grayscale color mode
#14 795.0 Warning: Data has too many channels for Grayscale color mode
#14 795.0 Warning: Data has too many channels for Grayscale color mode
#14 795.0 Warning: Data has too many channels for Grayscale color mode
#14 795.1 Warning: Data has too many channels for Grayscale color mode
#14 795.1 Warning: Data has too many channels for Grayscale color mode
#14 795.1 Warning: Data has too many channels for Colorized color mode
#14 795.1 Warning: Data has too many channels for Colorized color mode
#14 795.2 Warning: Data has too many channels for Colorized color mode
#14 795.7 Warning: Data has too many channels for Default color mode
#14 796.0 [[1;34mINFO[m] [1;32mTests run: [0;1;32m30[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 4.966 s - in [1mTestSuite[m
#14 796.3 [[1;34mINFO[m]
#14 796.3 [[1;34mINFO[m] Results:
#14 796.3 [[1;34mINFO[m]
#14 796.3 [[1;34mINFO[m] [1;32mTests run: 30, Failures: 0, Errors: 0, Skipped: 0[m
#14 796.3 [[1;34mINFO[m]
#14 796.3 [[1;34mINFO[m]
#14 796.3 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 796.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.3.0-SNAPSHOT.jar
#14 796.3 [[1;34mINFO[m]
#14 796.3 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m >>>[m
#14 796.3 [[1;34mINFO[m]
#14 796.3 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 796.3 [[1;34mINFO[m]
#14 796.3 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 796.3 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 796.3 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 796.3 [[1;34mINFO[m] Storing buildNumber: 55487859c47c6e07764f09ec713aa9dc192b5a3a at timestamp: 1749708018369
#14 796.3 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 796.3 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 796.3
#14 796.3 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 796.3 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 796.3 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 796.3 [[1;34mINFO[m]
#14 796.3 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m <<<[m
#14 796.3 [[1;34mINFO[m]
#14 796.3 [[1;34mINFO[m]
#14 796.3 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 796.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.3.0-SNAPSHOT-sources.jar
#14 796.4 [[1;34mINFO[m]
#14 796.4 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 796.4 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.3.0-SNAPSHOT-tests.jar
#14 796.4 [[1;34mINFO[m]
#14 796.4 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 796.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.3.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.jar
#14 796.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.pom
#14 796.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.3.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT-sources.jar
#14 796.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.3.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT-tests.jar
#14 796.4 [[1;34mINFO[m]
#14 796.4 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bio-formats-tools[0;1m >------------------------[m
#14 796.4 [[1;34mINFO[m] [1mBuilding Bio-Formats command line tools 8.3.0-SNAPSHOT [18/24][m
#14 796.4 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 796.4 [[1;34mINFO[m]
#14 796.4 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats-tools[0;1m ---[m
#14 796.4 [[1;34mINFO[m]
#14 796.4 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 796.4 [[1;34mINFO[m]
#14 796.4 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 796.4 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 796.4 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 796.4 [[1;34mINFO[m] Storing buildNumber: 55487859c47c6e07764f09ec713aa9dc192b5a3a at timestamp: 1749708018454
#14 796.4 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 796.4 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 796.4
#14 796.4 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 796.4 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 796.4 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 796.4 [[1;34mINFO[m]
#14 796.4 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 796.4 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 796.4 [[1;34mINFO[m] Copying 0 resource
#14 796.4 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-tools/lib
#14 796.4 [[1;34mINFO[m] Copying 0 resource
#14 796.4 [[1;34mINFO[m] Copying 0 resource
#14 796.4 [[1;34mINFO[m]
#14 796.4 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 796.4 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 796.4 [[1;34mINFO[m] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/target/classes
#14 796.6 [[1;34mINFO[m]
#14 796.6 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 796.6 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 796.6 [[1;34mINFO[m] Copying 1 resource
#14 796.6 [[1;34mINFO[m]
#14 796.6 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 796.6 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 796.6 [[1;34mINFO[m] Compiling 1 source file to /bio-formats-build/bioformats/components/bio-formats-tools/target/test-classes
#14 796.7 [[1;34mINFO[m]
#14 796.7 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats-tools[0;1m ---[m
#14 796.7 [[1;34mINFO[m]
#14 796.7 [[1;34mINFO[m] -------------------------------------------------------
#14 796.7 [[1;34mINFO[m] T E S T S
#14 796.7 [[1;34mINFO[m] -------------------------------------------------------
#14 796.9 [[1;34mINFO[m] Running loci.formats.tools.[1mImageConverterTest[m
#14 886.4 [[1;34mINFO[m] [1;32mTests run: [0;1;32m55[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 89.552 s - in loci.formats.tools.[1mImageConverterTest[m
#14 886.7 [[1;34mINFO[m]
#14 886.7 [[1;34mINFO[m] Results:
#14 886.7 [[1;34mINFO[m]
#14 886.7 [[1;34mINFO[m] [1;32mTests run: 55, Failures: 0, Errors: 0, Skipped: 0[m
#14 886.7 [[1;34mINFO[m]
#14 886.7 [[1;34mINFO[m]
#14 886.7 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats-tools[0;1m ---[m
#14 886.7 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.3.0-SNAPSHOT.jar
#14 886.7 [[1;34mINFO[m]
#14 886.7 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m >>>[m
#14 886.8 [[1;34mINFO[m]
#14 886.8 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 886.8 [[1;34mINFO[m]
#14 886.8 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 886.8 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 886.8 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 886.8 [[1;34mINFO[m] Storing buildNumber: 55487859c47c6e07764f09ec713aa9dc192b5a3a at timestamp: 1749708108807
#14 886.8 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 886.8 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 886.8
#14 886.8 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 886.8 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 886.8 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 886.8 [[1;34mINFO[m]
#14 886.8 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m <<<[m
#14 886.8 [[1;34mINFO[m]
#14 886.8 [[1;34mINFO[m]
#14 886.8 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 886.8 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.3.0-SNAPSHOT-sources.jar
#14 886.8 [[1;34mINFO[m]
#14 886.8 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 886.8 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.3.0-SNAPSHOT-tests.jar
#14 886.8 [[1;34mINFO[m]
#14 886.8 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats-tools[0;1m ---[m
#14 886.8 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.3.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.jar
#14 886.8 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.pom
#14 886.8 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.3.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT-sources.jar
#14 886.8 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.3.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT-tests.jar
#14 886.8 [[1;34mINFO[m]
#14 886.8 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bioformats_package[0;1m >-----------------------[m
#14 886.8 [[1;34mINFO[m] [1mBuilding bioformats_package bundle 8.3.0-SNAPSHOT [19/24][m
#14 886.8 [[1;34mINFO[m] [1m--------------------------------[ pom ]---------------------------------[m
#14 886.8 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.pom
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#14 886.8 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.jar
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#14 886.9 [[1;34mINFO[m]
#14 886.9 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbioformats_package[0;1m ---[m
#14 886.9 [[1;34mINFO[m]
#14 886.9 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbioformats_package[0;1m ---[m
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#14 886.9 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 886.9 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 886.9 [[1;34mINFO[m] Storing buildNumber: 55487859c47c6e07764f09ec713aa9dc192b5a3a at timestamp: 1749708108922
#14 886.9 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 886.9 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 886.9
#14 886.9 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 886.9 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 886.9 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 886.9 [[1;34mINFO[m]
#14 886.9 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbioformats_package[0;1m >>>[m
#14 886.9 [[1;34mINFO[m]
#14 886.9 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbioformats_package[0;1m ---[m
#14 886.9 [[1;34mINFO[m]
#14 886.9 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbioformats_package[0;1m ---[m
#14 886.9 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 886.9 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 886.9 [[1;34mINFO[m] Storing buildNumber: 55487859c47c6e07764f09ec713aa9dc192b5a3a at timestamp: 1749708108940
#14 886.9 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 886.9 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 886.9
#14 886.9 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 886.9 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 886.9 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 886.9 [[1;34mINFO[m]
#14 886.9 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbioformats_package[0;1m <<<[m
#14 886.9 [[1;34mINFO[m]
#14 886.9 [[1;34mINFO[m]
#14 886.9 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbioformats_package[0;1m ---[m
#14 886.9 [[1;34mINFO[m]
#14 886.9 [[1;34mINFO[m] [1m--- [0;32mmaven-assembly-plugin:3.1.0:single[m [1m(make-assembly)[m @ [36mbioformats_package[0;1m ---[m
#14 886.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.pom
#14 886.9 Progress (1): 4.1/7.6 kB
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#14 886.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.jar
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#14 887.1 [[1;34mINFO[m] Reading assembly descriptor: assembly.xml
#14 887.4 [[1;33mWARNING[m] The following patterns were never triggered in this artifact exclusion filter:
#14 887.4 o 'gov.nih.imagej:imagej'
#14 887.4 o 'net.imagej:ij'
#14 887.4 o 'org.springframework:spring*'
#14 887.4 o 'aopalliance:aopalliance'
#14 887.4 o 'org.aspectj:aspectj*'
#14 887.4 o 'org.slf4j:slf4j-log4j12'
#14 887.4 o 'log4j:log4j'
#14 887.4 o 'org.testng:testng'
#14 887.4 o 'com.beust:jcommander'
#14 887.4 o 'o
#14 887.4 [output clipped, log limit 2MiB reached]
#14 1025.3 SLF4J: No SLF4J providers were found.
#14 1025.3 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 1025.3 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 1025.5 WARNING: A Java agent has been loaded dynamically (/home/build/.m2/repository/net/bytebuddy/byte-buddy-agent/1.10.19/byte-buddy-agent-1.10.19.jar)
#14 1025.5 WARNING: If a serviceability tool is in use, please run with -XX:+EnableDynamicAgentLoading to hide this warning
#14 1025.5 WARNING: If a serviceability tool is not in use, please run with -Djdk.instrument.traceUsage for more information
#14 1025.5 WARNING: Dynamic loading of agents will be disallowed by default in a future release
#14 DONE 1032.0s
#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.0s
#16 [12/13] RUN ant jars tools
#16 0.262 Buildfile: /bio-formats-build/bioformats/build.xml
#16 0.630 [echo] isSnapshot = true
#16 0.749
#16 0.749 copy-jars:
#16 0.749
#16 0.749 deps-formats-api:
#16 0.839 [echo] isSnapshot = true
#16 0.903
#16 0.903 install-pom:
#16 1.096 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.3.0-SNAPSHOT/pom-bio-formats-8.3.0-SNAPSHOT.pom
#16 1.144 [resolver:install] Installing ome:pom-bio-formats:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 1.148 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 1.150
#16 1.150 jar-formats-api:
#16 1.266 [echo] isSnapshot = true
#16 1.433
#16 1.433 init-title:
#16 1.433 [echo] ----------=========== formats-api ===========----------
#16 1.433
#16 1.433 init-timestamp:
#16 1.441
#16 1.441 init:
#16 1.441
#16 1.441 copy-resources:
#16 1.442 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 1.455 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 1.457
#16 1.457 compile:
#16 1.648 [resolver:resolve] Resolving artifacts
#16 1.676 [javac] Compiling 54 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 1.888 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 1.888 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 1.888 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 1.888 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 2.589 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 2.589 [javac] import loci.common.ReflectedUniverse;
#16 2.589 [javac] ^
#16 2.789 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 2.790 [javac] int currentIndex = r.getCoreIndex();
#16 2.790 [javac] ^
#16 2.790 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 2.790 [javac] r.setCoreIndex(coreIndex);
#16 2.790 [javac] ^
#16 2.790 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 2.790 [javac] r.setCoreIndex(currentIndex);
#16 2.790 [javac] ^
#16 2.991 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 2.991 [javac] public void setCoreIndex(int no) {
#16 2.991 [javac] ^
#16 2.991 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 2.991 [javac] public int getCoreIndex() {
#16 2.991 [javac] ^
#16 2.991 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 2.991 [javac] public int coreIndexToSeries(int index)
#16 2.991 [javac] ^
#16 2.992 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 2.992 [javac] public int seriesToCoreIndex(int series)
#16 2.992 [javac] ^
#16 2.992 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 2.992 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 2.992 [javac] ^
#16 2.992 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 2.992 [javac] if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 2.992 [javac] ^
#16 2.992 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 2.992 [javac] if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 2.992 [javac] ^
#16 2.993 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 2.993 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 2.993 [javac] ^
#16 2.993 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 2.993 [javac] core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 2.993 [javac] ^
#16 3.093 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:266: warning: [deprecation] URL(String) in URL has been deprecated
#16 3.094 [javac] Manifest manifest = new Manifest(new URL(manifestPath).openStream());
#16 3.094 [javac] ^
#16 3.094 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.094 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 3.094 [javac] ^
#16 3.094 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.094 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 3.094 [javac] ^
#16 3.195 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.195 [javac] public void setCoreIndex(int no) {
#16 3.195 [javac] ^
#16 3.195 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.195 [javac] public int getCoreIndex() {
#16 3.195 [javac] ^
#16 3.196 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.196 [javac] public int coreIndexToSeries(int index) {
#16 3.196 [javac] ^
#16 3.196 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.196 [javac] public int seriesToCoreIndex(int series) {
#16 3.196 [javac] ^
#16 3.196 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.196 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 3.196 [javac] ^
#16 3.196 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.197 [javac] return getReader().getCoreMetadataList();
#16 3.197 [javac] ^
#16 3.297 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.297 [javac] return getReader().getCoreIndex();
#16 3.297 [javac] ^
#16 3.297 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.297 [javac] getReader().setCoreIndex(no);
#16 3.297 [javac] ^
#16 3.297 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.298 [javac] return getReader().seriesToCoreIndex(series);
#16 3.298 [javac] ^
#16 3.298 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.298 [javac] return getReader().coreIndexToSeries(index);
#16 3.298 [javac] ^
#16 3.298 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.298 [javac] public void setCoreIndex(int no) {
#16 3.298 [javac] ^
#16 3.298 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.298 [javac] public int getCoreIndex() {
#16 3.298 [javac] ^
#16 3.298 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.298 [javac] public int coreIndexToSeries(int index) {
#16 3.298 [javac] ^
#16 3.298 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.298 [javac] public int seriesToCoreIndex(int series) {
#16 3.298 [javac] ^
#16 3.299 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.299 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 3.299 [javac] ^
#16 3.299 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.299 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 3.299 [javac] ^
#16 3.299 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.299 [javac] return reader.getCoreIndex();
#16 3.299 [javac] ^
#16 3.299 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.299 [javac] reader.setCoreIndex(no);
#16 3.299 [javac] ^
#16 3.299 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.299 [javac] return reader.seriesToCoreIndex(series);
#16 3.299 [javac] ^
#16 3.300 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.300 [javac] return reader.coreIndexToSeries(index);
#16 3.300 [javac] ^
#16 3.499 [javac] Note: Some input files use unchecked or unsafe operations.
#16 3.499 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 3.499 [javac] 40 warnings
#16 3.500
#16 3.500 formats-api.jar:
#16 3.500 [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 3.527 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 3.564 [resolver:install] Using default POM (ome:formats-api:8.3.0-SNAPSHOT)
#16 3.567 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/formats-api-8.3.0-SNAPSHOT.pom
#16 3.569 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/formats-api-8.3.0-SNAPSHOT.jar
#16 3.571 [resolver:install] Installing ome:formats-api:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 3.573 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 3.574
#16 3.574 deps-turbojpeg:
#16 3.574
#16 3.574 jar-turbojpeg:
#16 3.676 [echo] isSnapshot = true
#16 3.832
#16 3.832 init-title:
#16 3.832 [echo] ----------=========== turbojpeg ===========----------
#16 3.832
#16 3.832 init-timestamp:
#16 3.833
#16 3.833 init:
#16 3.833
#16 3.833 copy-resources:
#16 3.833 [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 3.834
#16 3.834 compile:
#16 3.844 [resolver:resolve] Resolving artifacts
#16 3.848 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 4.050 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 4.050 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 4.051 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 4.051 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 4.751 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 4.751 [javac] protected void finalize() throws Throwable {
#16 4.752 [javac] ^
#16 4.752 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 4.752 [javac] super.finalize();
#16 4.752 [javac] ^
#16 4.795 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 4.795 [javac] protected void finalize() throws Throwable {
#16 4.795 [javac] ^
#16 4.795 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 4.795 [javac] super.finalize();
#16 4.795 [javac] ^
#16 4.795 [javac] 8 warnings
#16 4.796
#16 4.796 jar:
#16 4.799 [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 4.992 [resolver:install] Using default POM (ome:turbojpeg:8.3.0-SNAPSHOT)
#16 5.000 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/turbojpeg-8.3.0-SNAPSHOT.pom
#16 5.037 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/turbojpeg-8.3.0-SNAPSHOT.jar
#16 5.040 [resolver:install] Installing ome:turbojpeg:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 5.043 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 5.044
#16 5.044 deps-formats-bsd:
#16 5.044
#16 5.044 jar-formats-bsd:
#16 5.187 [echo] isSnapshot = true
#16 5.329
#16 5.329 init-title:
#16 5.329 [echo] ----------=========== formats-bsd ===========----------
#16 5.329
#16 5.329 init-timestamp:
#16 5.329
#16 5.329 init:
#16 5.329
#16 5.329 copy-resources:
#16 5.330 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 5.333 [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 5.334
#16 5.334 compile:
#16 5.550 [resolver:resolve] Resolving artifacts
#16 5.578 [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 5.787 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 5.787 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 5.787 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 5.787 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 6.988 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 6.988 [javac] import loci.common.ReflectedUniverse;
#16 6.988 [javac] ^
#16 7.289 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.289 [javac] core.size() != reader.getCoreMetadataList().size())
#16 7.289 [javac] ^
#16 7.289 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.289 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 7.289 [javac] ^
#16 7.389 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.389 [javac] int n = reader.getCoreMetadataList().size();
#16 7.389 [javac] ^
#16 7.390 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 7.390 [javac] reader.setCoreIndex(coreIndex);
#16 7.390 [javac] ^
#16 7.390 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.390 [javac] int n = reader.getCoreMetadataList().size();
#16 7.390 [javac] ^
#16 7.390 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.390 [javac] int n = reader.getCoreMetadataList().size();
#16 7.390 [javac] ^
#16 7.390 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 7.390 [javac] if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 7.390 [javac] ^
#16 7.390 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.390 [javac] int n = reader.getCoreMetadataList().size();
#16 7.390 [javac] ^
#16 7.390 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 7.390 [javac] if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 7.390 [javac] ^
#16 7.390 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.390 [javac] int n = reader.getCoreMetadataList().size();
#16 7.390 [javac] ^
#16 7.390 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 7.390 [javac] if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 7.390 [javac] ^
#16 7.390 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 7.390 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 7.390 [javac] ^
#16 7.391 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 7.391 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 7.391 [javac] ^
#16 7.391 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.391 [javac] return noStitch ? reader.getCoreMetadataList() : core;
#16 7.391 [javac] ^
#16 7.391 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.391 [javac] if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 7.391 [javac] ^
#16 7.391 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.391 [javac] seriesCount = reader.getCoreMetadataList().size();
#16 7.391 [javac] ^
#16 7.391 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.391 [javac] if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 7.391 [javac] ^
#16 7.391 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.391 [javac] if (reader.getCoreMetadataList().size() > 1) return 0;
#16 7.391 [javac] ^
#16 7.391 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.391 [javac] r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 7.391 [javac] ^
#16 7.492 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.492 [javac] int seriesCount = unwrap().getCoreMetadataList().size();
#16 7.492 [javac] ^
#16 7.592 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:230: warning: [deprecation] URL(String) in URL has been deprecated
#16 7.592 [javac] URLConnection conn = new URL(query.toString()).openConnection();
#16 7.592 [javac] ^
#16 7.592 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:314: warning: [deprecation] URL(String) in URL has been deprecated
#16 7.592 [javac] URL url = new URL(urlPath);
#16 7.592 [javac] ^
#16 7.692 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 7.692 [javac] BitWriter out = new BitWriter();
#16 7.692 [javac] ^
#16 7.692 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 7.692 [javac] BitWriter out = new BitWriter();
#16 7.693 [javac] ^
#16 7.793 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 7.793 [javac] return new Double(v);
#16 7.793 [javac] ^
#16 8.394 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2106: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 8.394 [javac] return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#16 8.394 [javac] ^
#16 8.394 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2113: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 8.394 [javac] return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#16 8.394 [javac] ^
#16 8.394 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2120: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 8.394 [javac] return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#16 8.394 [javac] ^
#16 8.495 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 8.495 [javac] channelNames.put(new Integer(channelNames.size()), value);
#16 8.495 [javac] ^
#16 8.695 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:622: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.695 [javac] OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 8.695 [javac] ^
#16 8.695 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 8.695 [javac] StreamTokenizer st = new StreamTokenizer(in);
#16 8.695 [javac] ^
#16 8.796 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.796 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 8.796 [javac] ^
#16 8.796 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 8.796 [javac] protected ReflectedUniverse r;
#16 8.796 [javac] ^
#16 8.796 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 8.796 [javac] r = new ReflectedUniverse();
#16 8.796 [javac] ^
#16 8.896 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1043: warning: [deprecation] NM in UNITS has been deprecated
#16 8.896 [javac] wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 8.896 [javac] ^
#16 8.896 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1075: warning: [deprecation] MM in UNITS has been deprecated
#16 8.896 [javac] sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 8.897 [javac] ^
#16 8.897 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1088: warning: [deprecation] MM in UNITS has been deprecated
#16 8.897 [javac] String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 8.897 [javac] ^
#16 8.897 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1089: warning: [deprecation] MM in UNITS has been deprecated
#16 8.897 [javac] String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 8.897 [javac] ^
#16 8.897 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1108: warning: [deprecation] MM in UNITS has been deprecated
#16 8.897 [javac] volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 8.897 [javac] ^
#16 8.897 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1112: warning: [deprecation] MM in UNITS has been deprecated
#16 8.897 [javac] volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 8.897 [javac] ^
#16 8.897 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1118: warning: [deprecation] MM in UNITS has been deprecated
#16 8.897 [javac] volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 8.897 [javac] ^
#16 8.897 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1166: warning: [deprecation] MM in UNITS has been deprecated
#16 8.897 [javac] offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 8.897 [javac] ^
#16 8.897 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1170: warning: [deprecation] MM in UNITS has been deprecated
#16 8.897 [javac] offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 8.897 [javac] ^
#16 8.998 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 8.998 [javac] ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 8.998 [javac] ^
#16 8.998 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 8.998 [javac] ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 8.998 [javac] ^
#16 8.998 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 8.998 [javac] ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 8.998 [javac] ^
#16 8.998 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 8.998 [javac] ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 8.998 [javac] ^
#16 8.998 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 8.998 [javac] libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 8.998 [javac] ^
#16 8.998 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:320: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 8.999 [javac] doubleResult[i] = new Double(result.get(i).doubleValue());
#16 8.999 [javac] ^
#16 8.999 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:342: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 8.999 [javac] result[i] = new Double(readNumber().doubleValue());
#16 8.999 [javac] ^
#16 9.074 [javac] Note: Some input files use unchecked or unsafe operations.
#16 9.074 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 9.074 [javac] 55 warnings
#16 9.075
#16 9.075 formats-bsd.jar:
#16 9.084 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 9.209 [resolver:install] Using default POM (ome:formats-bsd:8.3.0-SNAPSHOT)
#16 9.213 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/formats-bsd-8.3.0-SNAPSHOT.pom
#16 9.231 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/formats-bsd-8.3.0-SNAPSHOT.jar
#16 9.233 [resolver:install] Installing ome:formats-bsd:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 9.235 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 9.235
#16 9.235 deps-formats-gpl:
#16 9.235
#16 9.235 jar-formats-gpl:
#16 9.332 [echo] isSnapshot = true
#16 9.470
#16 9.470 init-title:
#16 9.470 [echo] ----------=========== formats-gpl ===========----------
#16 9.470
#16 9.470 init-timestamp:
#16 9.470
#16 9.470 init:
#16 9.470
#16 9.470 copy-resources:
#16 9.471 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 9.472 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 9.473
#16 9.473 compile:
#16 9.840 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 10.27 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 10.72 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom (0 B at 0.0 KB/sec)
#16 10.73 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 10.83 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 10.95 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom (0 B at 0.0 KB/sec)
#16 11.02 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 11.14 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 11.26 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom (0 B at 0.0 KB/sec)
#16 11.30 [resolver:resolve] Resolving artifacts
#16 11.31 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 11.31 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 11.45 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 11.45 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 11.79 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (0 B at 0.0 KB/sec)
#16 11.79 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (0 B at 0.0 KB/sec)
#16 11.81 [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 12.02 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 12.02 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 12.02 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 12.02 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 13.32 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 13.32 [javac] import loci.formats.codec.BitWriter;
#16 13.32 [javac] ^
#16 13.32 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 13.32 [javac] import loci.formats.codec.BitWriter;
#16 13.32 [javac] ^
#16 15.33 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 15.33 [javac] LOGGER.trace("Parsing tokens: {}", tokens);
#16 15.33 [javac] ^
#16 15.33 [javac] cast to Object for a varargs call
#16 15.33 [javac] cast to Object[] for a non-varargs call and to suppress this warning
#16 15.43 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1269: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.43 [javac] BitWriter bits = null;
#16 15.43 [javac] ^
#16 15.43 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1271: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.43 [javac] bits = new BitWriter(planes[index].length / 8);
#16 15.43 [javac] ^
#16 15.73 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 15.73 [javac] CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 15.73 [javac] ^
#16 16.13 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 16.13 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 16.13 [javac] ^
#16 16.13 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 16.13 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 16.13 [javac] ^
#16 16.43 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:170: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 16.43 [javac] Variable variable = group.findVariable(variableName);
#16 16.43 [javac] ^
#16 16.43 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:197: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 16.43 [javac] Variable variable = group.findVariable(variableName);
#16 16.43 [javac] ^
#16 16.43 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:200: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 16.43 [javac] List<Attribute> attributes = variable.getAttributes();
#16 16.43 [javac] ^
#16 16.43 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getName() in CDMNode has been deprecated
#16 16.43 [javac] String groupName = group.getName();
#16 16.43 [javac] ^
#16 16.43 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:239: warning: [deprecation] getAttributes() in Group has been deprecated
#16 16.43 [javac] List<Attribute> attributes = group.getAttributes();
#16 16.43 [javac] ^
#16 16.43 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:247: warning: [deprecation] getName() in CDMNode has been deprecated
#16 16.43 [javac] String variableName = variable.getName();
#16 16.43 [javac] ^
#16 16.43 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:270: warning: [deprecation] findGroup(String) in Group has been deprecated
#16 16.43 [javac] Group nextParent = parent.findGroup(token);
#16 16.43 [javac] ^
#16 16.43 [javac] Note: Some input files use unchecked or unsafe operations.
#16 16.43 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 16.47 [javac] 19 warnings
#16 16.47
#16 16.47 formats-gpl.jar:
#16 16.48 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 16.64 [resolver:install] Using default POM (ome:formats-gpl:8.3.0-SNAPSHOT)
#16 16.65 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.pom
#16 16.65 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.jar
#16 16.65 [resolver:install] Installing ome:formats-gpl:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 16.65 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 16.65
#16 16.65 deps-bio-formats-plugins:
#16 16.65
#16 16.65 jar-bio-formats-plugins:
#16 16.77 [echo] isSnapshot = true
#16 16.92
#16 16.92 init-title:
#16 16.92 [echo] ----------=========== bio-formats_plugins ===========----------
#16 16.92
#16 16.92 init-timestamp:
#16 16.92
#16 16.92 init:
#16 16.92
#16 16.92 copy-resources:
#16 16.92 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 16.92 [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 16.92
#16 16.92 compile:
#16 17.18 [resolver:resolve] Resolving artifacts
#16 17.20 [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 17.42 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 17.42 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 17.42 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 17.42 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 18.32 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.32 [javac] import loci.common.ReflectedUniverse;
#16 18.32 [javac] ^
#16 18.32 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.32 [javac] import loci.common.ReflectedUniverse;
#16 18.32 [javac] ^
#16 18.72 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 18.72 [javac] "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 18.72 [javac] ^
#16 18.82 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/InstallWizard.java:119: warning: [deprecation] URL(String) in URL has been deprecated
#16 18.82 [javac] URL url = new URL(urlPath);
#16 18.82 [javac] ^
#16 18.92 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.92 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 18.92 [javac] ^
#16 18.92 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.92 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 18.92 [javac] ^
#16 19.02 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.02 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 19.02 [javac] ^
#16 19.02 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.02 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 19.02 [javac] ^
#16 19.22 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/shortcut/ShortcutPanel.java:102: warning: [deprecation] URL(String) in URL has been deprecated
#16 19.22 [javac] url = new URL(path);
#16 19.22 [javac] ^
#16 19.42 [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 19.42 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 19.42 [javac] 13 warnings
#16 19.42
#16 19.42 bio-formats-plugins.jar:
#16 19.42 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 19.46 [resolver:install] Using default POM (ome:bio-formats_plugins:8.3.0-SNAPSHOT)
#16 19.46 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.pom
#16 19.52 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.jar
#16 19.52 [resolver:install] Installing ome:bio-formats_plugins:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 19.52 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 19.52
#16 19.52 deps-bio-formats-tools:
#16 19.52
#16 19.52 jar-bio-formats-tools:
#16 19.62 [echo] isSnapshot = true
#16 19.75
#16 19.75 init-title:
#16 19.75 [echo] ----------=========== bio-formats-tools ===========----------
#16 19.75
#16 19.75 init-timestamp:
#16 19.75
#16 19.75 init:
#16 19.75
#16 19.75 copy-resources:
#16 19.75 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 19.75
#16 19.75 compile:
#16 20.02 [resolver:resolve] Resolving artifacts
#16 20.03 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 20.23 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 20.23 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 20.23 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 20.23 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 21.33 [javac] 4 warnings
#16 21.35
#16 21.35 bio-formats-tools.jar:
#16 21.36 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 21.37 [resolver:install] Using default POM (ome:bio-formats-tools:8.3.0-SNAPSHOT)
#16 21.37 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.pom
#16 21.37 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.jar
#16 21.37 [resolver:install] Installing ome:bio-formats-tools:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 21.38 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 21.38
#16 21.38 deps-tests:
#16 21.38
#16 21.38 jar-tests:
#16 21.49 [echo] isSnapshot = true
#16 21.64
#16 21.64 init-title:
#16 21.65 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 21.65
#16 21.65 init-timestamp:
#16 21.65
#16 21.65 init:
#16 21.65
#16 21.65 copy-resources:
#16 21.65 [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 21.65
#16 21.65 compile:
#16 21.98 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 22.06 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 22.40 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 22.42 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.61 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.05 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#16 24.06 [resolver:resolve] Resolving artifacts
#16 24.07 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.11 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.45 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.46 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.86 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.23 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 25.23 [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 25.44 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 25.44 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 25.44 [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 25.44 [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 26.44 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:676: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 26.44 [javac] int index = unflattenedReader.getCoreIndex();
#16 26.44 [javac] ^
#16 26.44 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:677: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 26.44 [javac] reader.setCoreIndex(index);
#16 26.44 [javac] ^
#16 26.64 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2339: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 26.64 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 26.64 [javac] ^
#16 26.74 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2505: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 26.74 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 26.74 [javac] ^
#16 26.94 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 26.94 [javac] FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 26.94 [javac] ^
#16 26.94 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 26.94 [javac] FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 26.94 [javac] ^
#16 26.98 [javac] Note: Some input files use unchecked or unsafe operations.
#16 26.98 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 26.98 [javac] 10 warnings
#16 26.98
#16 26.98 tests.jar:
#16 26.98 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 27.00 [resolver:install] Using default POM (ome:test-suite:8.3.0-SNAPSHOT)
#16 27.00 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.3.0-SNAPSHOT/test-suite-8.3.0-SNAPSHOT.pom
#16 27.06 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.3.0-SNAPSHOT/test-suite-8.3.0-SNAPSHOT.jar
#16 27.06 [resolver:install] Installing ome:test-suite:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 27.06 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 27.06
#16 27.06 jars:
#16 27.06
#16 27.06 copy-jars:
#16 27.06
#16 27.06 deps-formats-api:
#16 27.11 [echo] isSnapshot = true
#16 27.16
#16 27.16 install-pom:
#16 27.29 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.3.0-SNAPSHOT/pom-bio-formats-8.3.0-SNAPSHOT.pom
#16 27.29 [resolver:install] Installing ome:pom-bio-formats:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 27.29 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 27.29
#16 27.29 jar-formats-api:
#16 27.43 [echo] isSnapshot = true
#16 27.57
#16 27.57 init-title:
#16 27.57 [echo] ----------=========== formats-api ===========----------
#16 27.57
#16 27.57 init-timestamp:
#16 27.57
#16 27.57 init:
#16 27.57
#16 27.57 copy-resources:
#16 27.57
#16 27.57 compile:
#16 27.71 [resolver:resolve] Resolving artifacts
#16 27.72
#16 27.72 formats-api.jar:
#16 27.74 [resolver:install] Using default POM (ome:formats-api:8.3.0-SNAPSHOT)
#16 27.74 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/formats-api-8.3.0-SNAPSHOT.pom
#16 27.74 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/formats-api-8.3.0-SNAPSHOT.jar
#16 27.75 [resolver:install] Installing ome:formats-api:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 27.75 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 27.75
#16 27.75 deps-turbojpeg:
#16 27.75
#16 27.75 jar-turbojpeg:
#16 27.84 [echo] isSnapshot = true
#16 27.97
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#16 27.99 [echo] ----------=========== turbojpeg ===========----------
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#16 28.01 [resolver:install] Using default POM (ome:turbojpeg:8.3.0-SNAPSHOT)
#16 28.01 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/turbojpeg-8.3.0-SNAPSHOT.pom
#16 28.01 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/turbojpeg-8.3.0-SNAPSHOT.jar
#16 28.02 [resolver:install] Installing ome:turbojpeg:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 28.02 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
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#16 28.11 [echo] isSnapshot = true
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#16 28.24 [echo] ----------=========== formats-bsd ===========----------
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#16 28.52 [resolver:install] Using default POM (ome:formats-bsd:8.3.0-SNAPSHOT)
#16 28.53 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/formats-bsd-8.3.0-SNAPSHOT.pom
#16 28.53 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/formats-bsd-8.3.0-SNAPSHOT.jar
#16 28.53 [resolver:install] Installing ome:formats-bsd:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 28.53 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
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#16 28.75 [echo] ----------=========== formats-gpl ===========----------
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#16 29.04 [resolver:install] Using default POM (ome:formats-gpl:8.3.0-SNAPSHOT)
#16 29.04 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.pom
#16 29.05 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.jar
#16 29.05 [resolver:install] Installing ome:formats-gpl:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 29.05 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
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#16 29.28
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#16 29.28 [echo] ----------=========== bio-formats_plugins ===========----------
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#16 29.58 [resolver:install] Using default POM (ome:bio-formats_plugins:8.3.0-SNAPSHOT)
#16 29.59 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.pom
#16 29.59 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.jar
#16 29.59 [resolver:install] Installing ome:bio-formats_plugins:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 29.59 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
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#16 29.59 deps-bio-formats-tools:
#16 29.59
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#16 29.82
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#16 29.82 [echo] ----------=========== bio-formats-tools ===========----------
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#16 30.08 [resolver:install] Using default POM (ome:bio-formats-tools:8.3.0-SNAPSHOT)
#16 30.08 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.pom
#16 30.08 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.jar
#16 30.08 [resolver:install] Installing ome:bio-formats-tools:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 30.08 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
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#16 30.09
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#16 30.32
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#16 30.32 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 30.32
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#16 30.59 [resolver:install] Using default POM (ome:test-suite:8.3.0-SNAPSHOT)
#16 30.59 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.3.0-SNAPSHOT/test-suite-8.3.0-SNAPSHOT.pom
#16 30.59 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.3.0-SNAPSHOT/test-suite-8.3.0-SNAPSHOT.jar
#16 30.60 [resolver:install] Installing ome:test-suite:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 30.60 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 30.60
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#16 30.60
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#16 30.60 [echo] ----------=========== bioformats_package ===========----------
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#16 31.14 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.18 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.26-SNAPSHOT/ome-common-6.0.26-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.20 [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.23 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.24 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.31 [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 31.40 [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 31.67 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.73 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.75 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 31.85 [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.7/joda-time-2.12.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 32.72 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.5.0-SNAPSHOT/ome-xml-6.5.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 35.77 [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.49.1.0/sqlite-jdbc-3.49.1.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.21 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.23 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.40 [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.42 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.42 [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.45 [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.91 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.15/logback-core-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.03 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.15/logback-classic-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.49 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 45.04 [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 45.91 [resolver:install] Using default POM (ome:bioformats_package:8.3.0-SNAPSHOT)
#16 45.92 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.3.0-SNAPSHOT/bioformats_package-8.3.0-SNAPSHOT.pom
#16 45.97 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.3.0-SNAPSHOT/bioformats_package-8.3.0-SNAPSHOT.jar
#16 46.01 [resolver:install] Installing ome:bioformats_package:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 46.01 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 46.02
#16 46.02 BUILD SUCCESSFUL
#16 46.02 Total time: 45 seconds
#16 DONE 47.1s
#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.0s
#18 exporting to image
#18 exporting layers
#18 exporting layers 4.0s done
#18 writing image sha256:b468caa3dfc3a191da0b3d00f8470c4290b06a60d25ce37ad7d1aa6105dd3faa done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 4.1s
[33m1 warning found (use docker --debug to expand):
[0m - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS