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Downloaded from central: https://repo.maven.apache.org/maven2/commons-math/commons-math/1.2/commons-math-1.2.jar (338 kB at 3.2 MB/s)
#14 616.0 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.jar (780 kB at 7.4 MB/s)
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Downloaded from central: https://repo.maven.apache.org/maven2/org/xerial/sqlite-jdbc/3.49.1.0/sqlite-jdbc-3.49.1.0.jar (14 MB at 20 MB/s)
#14 616.6 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#14 616.6 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#14 616.9 Progress (1): 0/4.3 MB
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Downloaded from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (80 kB at 100 kB/s)
#14 617.5 Progress (1): 0.7/4.3 MB
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#14 619.4 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 619.4 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 619.4 [[1;34mINFO[m] Storing buildNumber: 99431ee1ac9fd407df1014c660ca06598c283686 at timestamp: 1754785099666
#14 619.4 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 619.4 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 619.4
#14 619.4 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 619.4 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 619.4 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
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#14 619.4 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
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#14 619.4 [[1;34mINFO[m] Compiling 177 source files with javac [debug release 8] to target/classes
#14 621.7 [[1;33mWARNING[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:[1321,42] non-varargs call of varargs method with inexact argument type for last parameter;
#14 621.7 cast to java.lang.Object for a varargs call
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#14 621.7 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Some input files use or override a deprecated API.
#14 621.7 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Recompile with -Xlint:deprecation for details.
#14 621.7 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Some input files use unchecked or unsafe operations.
#14 621.7 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Recompile with -Xlint:unchecked for details.
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#14 621.8 [[1;34mINFO[m] Compiling 23 source files with javac [debug release 8] to target/test-classes
#14 622.0 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java uses unchecked or unsafe operations.
#14 622.0 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: Recompile with -Xlint:unchecked for details.
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#14 622.0 [[1;34mINFO[m] -------------------------------------------------------
#14 622.0 [[1;34mINFO[m] T E S T S
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#14 622.2 [[1;34mINFO[m] Running [1mTestSuite[m
#14 623.2 2025-08-10 00:18:23,505 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@78aea4b9 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 623.2 2025-08-10 00:18:23,509 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@69c79f09 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 623.3 2025-08-10 00:18:23,589 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@48e64352 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 623.3 2025-08-10 00:18:23,590 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@7249dadf reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 623.4 2025-08-10 00:18:23,644 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@7048f722 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 623.4 2025-08-10 00:18:23,644 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@c074c0c reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 623.4 2025-08-10 00:18:23,692 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@3c1e3314 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 623.4 2025-08-10 00:18:23,692 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@26f143ed reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 623.5 2025-08-10 00:18:23,805 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@22d6cac2 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 623.5 2025-08-10 00:18:23,805 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@30cdae70 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 623.6 2025-08-10 00:18:23,844 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@28782602 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 623.6 2025-08-10 00:18:23,844 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@c96a4ea reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 623.6 2025-08-10 00:18:23,882 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@6622a690 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 623.6 2025-08-10 00:18:23,882 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@6b9c69a9 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 623.7 2025-08-10 00:18:23,916 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@5d05ef57 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 623.7 2025-08-10 00:18:23,917 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@213deac2 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 624.0 [[1;34mINFO[m] [1;32mTests run: [0;1;32m99[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.806 s - in [1mTestSuite[m
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#14 624.3 [[1;34mINFO[m] Results:
#14 624.3 [[1;34mINFO[m]
#14 624.3 [[1;34mINFO[m] [1;32mTests run: 99, Failures: 0, Errors: 0, Skipped: 0[m
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#14 624.3 [[1;34mINFO[m] T E S T S
#14 624.3 [[1;34mINFO[m] -------------------------------------------------------
#14 624.5 [[1;34mINFO[m] Running [1mTestSuite[m
#14 624.9 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.399 s - in [1mTestSuite[m
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#14 625.2 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
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#14 625.2 [[1;34mINFO[m] -------------------------------------------------------
#14 625.2 [[1;34mINFO[m] T E S T S
#14 625.2 [[1;34mINFO[m] -------------------------------------------------------
#14 625.4 [[1;34mINFO[m] Running [1mTestSuite[m
#14 625.8 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.395 s - in [1mTestSuite[m
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#14 626.1 [[1;34mINFO[m] Results:
#14 626.1 [[1;34mINFO[m]
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#14 626.1 [[1;34mINFO[m]
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#14 626.1 [[1;34mINFO[m] -------------------------------------------------------
#14 626.1 [[1;34mINFO[m] T E S T S
#14 626.1 [[1;34mINFO[m] -------------------------------------------------------
#14 626.2 [[1;34mINFO[m] Running [1mTestSuite[m
#14 626.7 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.412 s - in [1mTestSuite[m
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#14 627.0 [[1;34mINFO[m]
#14 627.0 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 627.0 [[1;34mINFO[m]
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#14 627.0 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.4.0-SNAPSHOT.jar
#14 627.0 [[1;34mINFO[m]
#14 627.0 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m >>>[m
#14 627.0 [[1;34mINFO[m]
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#14 627.1 [[1;34mINFO[m]
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#14 627.1 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 627.1 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 627.1 [[1;34mINFO[m] Storing buildNumber: 99431ee1ac9fd407df1014c660ca06598c283686 at timestamp: 1754785107316
#14 627.1 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 627.1 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 627.1
#14 627.1 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 627.1 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 627.1 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 627.1 [[1;34mINFO[m]
#14 627.1 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m <<<[m
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#14 627.1 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.4.0-SNAPSHOT-sources.jar
#14 627.1 [[1;34mINFO[m]
#14 627.1 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 627.2 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.4.0-SNAPSHOT-tests.jar
#14 627.2 [[1;34mINFO[m]
#14 627.2 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mformats-gpl[0;1m ---[m
#14 627.2 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.4.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/formats-gpl/8.4.0-SNAPSHOT/formats-gpl-8.4.0-SNAPSHOT.jar
#14 627.2 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.4.0-SNAPSHOT/formats-gpl-8.4.0-SNAPSHOT.pom
#14 627.2 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.4.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/formats-gpl/8.4.0-SNAPSHOT/formats-gpl-8.4.0-SNAPSHOT-sources.jar
#14 627.2 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.4.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/formats-gpl/8.4.0-SNAPSHOT/formats-gpl-8.4.0-SNAPSHOT-tests.jar
#14 627.2 [[1;34mINFO[m]
#14 627.2 [[1;34mINFO[m] [1m----------------------< [0;36mome:bio-formats_plugins[0;1m >-----------------------[m
#14 627.2 [[1;34mINFO[m] [1mBuilding Bio-Formats Plugins for ImageJ 8.4.0-SNAPSHOT [17/24][m
#14 627.2 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 627.2 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom
#14 627.2 Progress (1): 4.1/7.9 kB
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#14 627.2 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar (2.5 MB at 20 MB/s)
#14 627.3 [[1;34mINFO[m]
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#14 627.3 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 627.3 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 627.4 [[1;34mINFO[m] Storing buildNumber: 99431ee1ac9fd407df1014c660ca06598c283686 at timestamp: 1754785107613
#14 627.4 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 627.4 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 627.4
#14 627.4 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 627.4 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 627.4 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 627.4 [[1;34mINFO[m]
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#14 627.4 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 627.4 [[1;34mINFO[m] Copying 3 resources
#14 627.4 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-plugins/lib
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#14 627.4 [[1;34mINFO[m] Recompiling the module because of [1mchanged dependency[m.
#14 627.4 [[1;34mINFO[m] Compiling 70 source files with javac [debug release 8] to target/classes
#14 627.9 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Some input files use or override a deprecated API.
#14 627.9 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Recompile with -Xlint:deprecation for details.
#14 627.9 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#14 627.9 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: Recompile with -Xlint:unchecked for details.
#14 627.9 [[1;34mINFO[m]
#14 627.9 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 627.9 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 627.9 [[1;34mINFO[m] Copying 1 resource
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#14 627.9 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.14.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 627.9 [[1;34mINFO[m] Recompiling the module because of [1mchanged dependency[m.
#14 627.9 [[1;34mINFO[m] Compiling 3 source files with javac [debug release 8] to target/test-classes
#14 628.0 [[1;34mINFO[m]
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#14 628.0 [[1;34mINFO[m]
#14 628.0 [[1;34mINFO[m] -------------------------------------------------------
#14 628.0 [[1;34mINFO[m] T E S T S
#14 628.0 [[1;34mINFO[m] -------------------------------------------------------
#14 628.2 [[1;34mINFO[m] Running [1mTestSuite[m
#14 629.4 Warning: Data has too many channels for Colorized color mode
#14 629.5 Warning: Data has too many channels for Colorized color mode
#14 629.5 Warning: Data has too many channels for Colorized color mode
#14 629.6 Warning: Data has too many channels for Colorized color mode
#14 629.6 Warning: Data has too many channels for Colorized color mode
#14 629.7 Warning: Data has too many channels for Colorized color mode
#14 629.7 Warning: Data has too many channels for Colorized color mode
#14 629.7 Warning: Data has too many channels for Colorized color mode
#14 629.8 Warning: Data has too many channels for Composite color mode
#14 629.8 Warning: Data has too many channels for Composite color mode
#14 630.1 Warning: Data has too many channels for Composite color mode
#14 630.1 Warning: Data has too many channels for Composite color mode
#14 630.1 Warning: Data has too many channels for Composite color mode
#14 630.1 Warning: Data has too many channels for Composite color mode
#14 630.1 Warning: Data has too many channels for Composite color mode
#14 630.1 Warning: Data has too many channels for Composite color mode
#14 630.1 Warning: Data has too many channels for Composite color mode
#14 630.1 Warning: Data has too many channels for Composite color mode
#14 630.1 Warning: Data has too many channels for Composite color mode
#14 630.2 Warning: Data has too many channels for Composite color mode
#14 630.2 Warning: Data has too many channels for Composite color mode
#14 630.2 Warning: Data has too many channels for Composite color mode
#14 630.2 Warning: Data has too many channels for Composite color mode
#14 630.2 Warning: Data has too many channels for Composite color mode
#14 630.2 Warning: Data has too many channels for Composite color mode
#14 630.2 Warning: Data has too many channels for Composite color mode
#14 630.5 Warning: Data has too many channels for Composite color mode
#14 630.5 Warning: Data has too many channels for Composite color mode
#14 630.5 Warning: Data has too many channels for Composite color mode
#14 630.5 Warning: Data has too many channels for Composite color mode
#14 630.5 Warning: Data has too many channels for Composite color mode
#14 630.5 Warning: Data has too many channels for Composite color mode
#14 630.5 Warning: Data has too many channels for Composite color mode
#14 630.6 Warning: Data has too many channels for Composite color mode
#14 630.6 Warning: Data has too many channels for Composite color mode
#14 630.6 Warning: Data has too many channels for Composite color mode
#14 630.6 Warning: Data has too many channels for Composite color mode
#14 630.6 Warning: Data has too many channels for Composite color mode
#14 630.6 Warning: Data has too many channels for Composite color mode
#14 630.6 Warning: Data has too many channels for Composite color mode
#14 630.6 Warning: Data has too many channels for Composite color mode
#14 630.6 Warning: Data has too many channels for Composite color mode
#14 630.6 Warning: Data has too many channels for Composite color mode
#14 630.7 Warning: Data has too many channels for Composite color mode
#14 631.0 Warning: Data has too many channels for Composite color mode
#14 631.0 Warning: Data has too many channels for Composite color mode
#14 631.0 Warning: Data has too many channels for Composite color mode
#14 631.0 Warning: Data has too many channels for Composite color mode
#14 631.0 Warning: Data has too many channels for Composite color mode
#14 631.0 Warning: Data has too many channels for Composite color mode
#14 631.0 Warning: Data has too many channels for Composite color mode
#14 631.1 Warning: Data has too many channels for Composite color mode
#14 631.1 Warning: Data has too many channels for Composite color mode
#14 631.1 Warning: Data has too many channels for Composite color mode
#14 631.1 Warning: Data has too many channels for Composite color mode
#14 631.1 Warning: Data has too many channels for Composite color mode
#14 631.1 Warning: Data has too many channels for Composite color mode
#14 631.1 Warning: Data has too many channels for Composite color mode
#14 631.1 Warning: Data has too many channels for Composite color mode
#14 631.1 Warning: Data has too many channels for Composite color mode
#14 631.5 Warning: Data has too many channels for Composite color mode
#14 631.5 Warning: Data has too many channels for Composite color mode
#14 631.5 Warning: Data has too many channels for Composite color mode
#14 631.5 Warning: Data has too many channels for Composite color mode
#14 631.5 Warning: Data has too many channels for Composite color mode
#14 631.5 Warning: Data has too many channels for Composite color mode
#14 631.5 Warning: Data has too many channels for Composite color mode
#14 631.5 Warning: Data has too many channels for Composite color mode
#14 631.5 Warning: Data has too many channels for Composite color mode
#14 631.6 Warning: Data has too many channels for Composite color mode
#14 631.6 Warning: Data has too many channels for Composite color mode
#14 631.6 Warning: Data has too many channels for Composite color mode
#14 631.6 Warning: Data has too many channels for Composite color mode
#14 631.6 Warning: Data has too many channels for Composite color mode
#14 631.6 Warning: Data has too many channels for Composite color mode
#14 631.6 Warning: Data has too many channels for Composite color mode
#14 631.7 Warning: Data has too many channels for Custom color mode
#14 631.7 Warning: Data has too many channels for Custom color mode
#14 631.7 Warning: Data has too many channels for Custom color mode
#14 631.7 Warning: Data has too many channels for Custom color mode
#14 631.7 Warning: Data has too many channels for Custom color mode
#14 631.8 Warning: Data has too many channels for Custom color mode
#14 631.8 Warning: Data has too many channels for Custom color mode
#14 631.8 Warning: Data has too many channels for Custom color mode
#14 631.8 Warning: Data has too many channels for Default color mode
#14 631.9 Warning: Data has too many channels for Default color mode
#14 631.9 Warning: Data has too many channels for Default color mode
#14 631.9 Warning: Data has too many channels for Default color mode
#14 631.9 Warning: Data has too many channels for Default color mode
#14 631.9 Warning: Data has too many channels for Default color mode
#14 632.0 Warning: Data has too many channels for Default color mode
#14 632.0 Warning: Data has too many channels for Default color mode
#14 632.0 Warning: Data has too many channels for Default color mode
#14 632.0 Warning: Data has too many channels for Default color mode
#14 632.1 Warning: Data has too many channels for Default color mode
#14 632.1 Warning: Data has too many channels for Default color mode
#14 632.1 Warning: Data has too many channels for Default color mode
#14 632.1 Warning: Data has too many channels for Default color mode
#14 632.2 Warning: Data has too many channels for Default color mode
#14 632.2 Warning: Data has too many channels for Default color mode
#14 632.2 Warning: Data has too many channels for Grayscale color mode
#14 632.2 Warning: Data has too many channels for Grayscale color mode
#14 632.2 Warning: Data has too many channels for Grayscale color mode
#14 632.3 Warning: Data has too many channels for Grayscale color mode
#14 632.3 Warning: Data has too many channels for Grayscale color mode
#14 632.3 Warning: Data has too many channels for Grayscale color mode
#14 632.3 Warning: Data has too many channels for Grayscale color mode
#14 632.4 Warning: Data has too many channels for Grayscale color mode
#14 632.4 Warning: Data has too many channels for Colorized color mode
#14 632.4 Warning: Data has too many channels for Colorized color mode
#14 632.4 Warning: Data has too many channels for Colorized color mode
#14 633.0 Warning: Data has too many channels for Default color mode
#14 633.3 [[1;34mINFO[m] [1;32mTests run: [0;1;32m30[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 5.048 s - in [1mTestSuite[m
#14 633.6 [[1;34mINFO[m]
#14 633.6 [[1;34mINFO[m] Results:
#14 633.6 [[1;34mINFO[m]
#14 633.6 [[1;34mINFO[m] [1;32mTests run: 30, Failures: 0, Errors: 0, Skipped: 0[m
#14 633.6 [[1;34mINFO[m]
#14 633.6 [[1;34mINFO[m]
#14 633.6 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 633.6 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.4.0-SNAPSHOT.jar
#14 633.6 [[1;34mINFO[m]
#14 633.6 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m >>>[m
#14 633.6 [[1;34mINFO[m]
#14 633.6 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 633.6 [[1;34mINFO[m]
#14 633.6 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 633.6 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 633.6 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 633.6 [[1;34mINFO[m] Storing buildNumber: 99431ee1ac9fd407df1014c660ca06598c283686 at timestamp: 1754785113879
#14 633.6 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 633.6 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 633.6
#14 633.6 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 633.6 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 633.6 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 633.6 [[1;34mINFO[m]
#14 633.6 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m <<<[m
#14 633.6 [[1;34mINFO[m]
#14 633.6 [[1;34mINFO[m]
#14 633.6 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 633.6 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.4.0-SNAPSHOT-sources.jar
#14 633.7 [[1;34mINFO[m]
#14 633.7 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 633.7 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.4.0-SNAPSHOT-tests.jar
#14 633.7 [[1;34mINFO[m]
#14 633.7 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 633.7 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.4.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.4.0-SNAPSHOT/bio-formats_plugins-8.4.0-SNAPSHOT.jar
#14 633.7 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.4.0-SNAPSHOT/bio-formats_plugins-8.4.0-SNAPSHOT.pom
#14 633.7 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.4.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.4.0-SNAPSHOT/bio-formats_plugins-8.4.0-SNAPSHOT-sources.jar
#14 633.7 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.4.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.4.0-SNAPSHOT/bio-formats_plugins-8.4.0-SNAPSHOT-tests.jar
#14 633.7 [[1;34mINFO[m]
#14 633.7 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bio-formats-tools[0;1m >------------------------[m
#14 633.7 [[1;34mINFO[m] [1mBuilding Bio-Formats command line tools 8.4.0-SNAPSHOT [18/24][m
#14 633.7 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 633.7 [[1;34mINFO[m]
#14 633.7 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats-tools[0;1m ---[m
#14 633.7 [[1;34mINFO[m]
#14 633.7 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 633.7 [[1;34mINFO[m]
#14 633.7 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 633.7 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 633.7 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 633.7 [[1;34mINFO[m] Storing buildNumber: 99431ee1ac9fd407df1014c660ca06598c283686 at timestamp: 1754785113969
#14 633.7 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 633.7 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 633.7
#14 633.7 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 633.7 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 633.7 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 633.7 [[1;34mINFO[m]
#14 633.7 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 633.7 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 633.7 [[1;34mINFO[m] Copying 0 resource
#14 633.7 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-tools/lib
#14 633.7 [[1;34mINFO[m] Copying 0 resource
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#14 633.7 [[1;34mINFO[m] Recompiling the module because of [1mchanged dependency[m.
#14 633.7 [[1;34mINFO[m] Compiling 10 source files with javac [debug release 8] to target/classes
#14 633.9 [[1;34mINFO[m]
#14 633.9 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 633.9 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 633.9 [[1;34mINFO[m] Copying 1 resource
#14 633.9 [[1;34mINFO[m]
#14 633.9 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.14.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 633.9 [[1;34mINFO[m] Recompiling the module because of [1mchanged dependency[m.
#14 633.9 [[1;34mINFO[m] Compiling 1 source file with javac [debug release 8] to target/test-classes
#14 634.1 [[1;34mINFO[m]
#14 634.1 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats-tools[0;1m ---[m
#14 634.1 [[1;34mINFO[m]
#14 634.1 [[1;34mINFO[m] -------------------------------------------------------
#14 634.1 [[1;34mINFO[m] T E S T S
#14 634.1 [[1;34mINFO[m] -------------------------------------------------------
#14 634.3 [[1;34mINFO[m] Running loci.formats.tools.[1mImageConverterTest[m
#14 719.5 [[1;34mINFO[m] [1;32mTests run: [0;1;32m55[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 85.196 s - in loci.formats.tools.[1mImageConverterTest[m
#14 719.8 [[1;34mINFO[m]
#14 719.8 [[1;34mINFO[m] Results:
#14 719.8 [[1;34mINFO[m]
#14 719.8 [[1;34mINFO[m] [1;32mTests run: 55, Failures: 0, Errors: 0, Skipped: 0[m
#14 719.8 [[1;34mINFO[m]
#14 719.8 [[1;34mINFO[m]
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#14 719.8 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.4.0-SNAPSHOT.jar
#14 719.8 [[1;34mINFO[m]
#14 719.8 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m >>>[m
#14 719.8 [[1;34mINFO[m]
#14 719.8 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 719.8 [[1;34mINFO[m]
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#14 719.8 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 719.8 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 719.8 [[1;34mINFO[m] Storing buildNumber: 99431ee1ac9fd407df1014c660ca06598c283686 at timestamp: 1754785200101
#14 719.8 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 719.8 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 719.8
#14 719.8 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 719.8 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 719.8 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 719.8 [[1;34mINFO[m]
#14 719.8 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m <<<[m
#14 719.8 [[1;34mINFO[m]
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#14 719.9 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.4.0-SNAPSHOT-sources.jar
#14 719.9 [[1;34mINFO[m]
#14 719.9 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 719.9 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.4.0-SNAPSHOT-tests.jar
#14 719.9 [[1;34mINFO[m]
#14 719.9 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats-tools[0;1m ---[m
#14 719.9 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.4.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.4.0-SNAPSHOT/bio-formats-tools-8.4.0-SNAPSHOT.jar
#14 719.9 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.4.0-SNAPSHOT/bio-formats-tools-8.4.0-SNAPSHOT.pom
#14 719.9 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.4.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.4.0-SNAPSHOT/bio-formats-tools-8.4.0-SNAPSHOT-sources.jar
#14 719.9 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.4.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.4.0-SNAPSHOT/bio-formats-tools-8.4.0-SNAPSHOT-tests.jar
#14 719.9 [[1;34mINFO[m]
#14 719.9 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bioformats_package[0;1m >-----------------------[m
#14 719.9 [[1;34mINFO[m] [1mBuilding bioformats_package bundle 8.4.0-SNAPSHOT [19/24][m
#14 719.9 [[1;34mINFO[m] [1m--------------------------------[ pom ]---------------------------------[m
#14 719.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.pom
#14 719.9 Progress (1): 4.1/16 kB
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#14 719.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.jar
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#14 719.9 [[1;34mINFO[m]
#14 719.9 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbioformats_package[0;1m ---[m
#14 719.9 [[1;34mINFO[m]
#14 719.9 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbioformats_package[0;1m ---[m
#14 719.9 [[1;34mINFO[m]
#14 719.9 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbioformats_package[0;1m ---[m
#14 719.9 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 719.9 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 720.0 [[1;34mINFO[m] Storing buildNumber: 99431ee1ac9fd407df1014c660ca06598c283686 at timestamp: 1754785200215
#14 720.0 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 720.0 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 720.0
#14 720.0 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 720.0 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 720.0 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 720.0 [[1;34mINFO[m]
#14 720.0 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbioformats_package[0;1m >>>[m
#14 720.0 [[1;34mINFO[m]
#14 720.0 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbioformats_package[0;1m ---[m
#14 720.0 [[1;34mINFO[m]
#14 720.0 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbioformats_package[0;1m ---[m
#14 720.0 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 720.0 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 720.0 [[1;34mINFO[m] Storing buildNumber: 99431ee1ac9fd407df1014c660ca06598c283686 at timestamp: 1754785200234
#14 720.0 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 720.0 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 720.0
#14 720.0 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 720.0 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 720.0 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 720.0 [[1;34mINFO[m]
#14 720.0 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbioformats_package[0;1m <<<[m
#14 720.0 [[1;34mINFO[m]
#14 720.0 [[1;34mINFO[m]
#14 720.0 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbioformats_package[0;1m ---[m
#14 720.0 [[1;34mINFO[m]
#14 720.0 [[1;34mINFO[m] [1m--- [0;32mmaven-assembly-plugin:3.1.0:single[m [1m(make-assembly)[m @ [36mbioformats_package[0;1m ---[m
#14 720.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.pom
#14 720.0 Progress (1): 4.1/7.6 kB
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#14 720.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.jar
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#14 720.1 [[1;34mINFO[m] Reading assembly descriptor: assembly.xml
#14 720.4 [[1;33mWARNING[m] The following patterns were never triggered in this artifact exclusion filter:
#14 720.4 o 'gov.nih.imagej:imagej'
#14 720.4 o 'net.imagej:ij'
#14 720.4 o 'org.springframework:spring*'
#14 720.4 o 'aopalliance:aopalliance'
#14 720.4 o 'org.aspectj:aspectj*'
#14 720.4 o 'org.slf4j:slf4j-log4j12'
#14 720.4 o 'log4j:log4j'
#14 720.4 o 'org.testng:testng'
#14 720.4 o 'com.beust:jcommander'
#14 720.4 o 'org.beanshell:bsh'
#14 720.4 o 'edu.princeton.cup:java-cup'
#14 720.4 o 'org.apache.bcel:bcel'
#14 720.4 o 'regexp:regexp'
#14 720.4 o 'org.apache.ant:ant-trax'
#14 720.4 o 'edu.ucar:udunits'
#14 720.4 o 'javax.servlet:servlet-api'
#14 720.4
#14 720.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/5.1.8/maven-bundle-plugin-5.1.8.pom
#14 720.5 Progress (1): 4.1/11 kB
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#14 720.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/felix-parent/7/felix-parent-7.pom
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#14 720.5 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.core/6.0.0/org.osgi.core-6.0.0.pom
#14 720.5 Progress (1): 1.1 kB
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#14 720.5 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/biz.aQute.bndlib/6.3.1/biz.aQute.bndlib-6.3.1.pom
#14 720.6 Progress (1): 4.1/5.2 kB
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#14 720.6 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.dto/1.0.0/org.osgi.dto-1.0.0.pom
#14 720.6 Progress (1): 1.3 kB
D
#14 720.6 [output clipped, log limit 2MiB reached]
#14 837.9 SLF4J: No SLF4J providers were found.
#14 837.9 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 837.9 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 DONE 845.4s
#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.1s
#16 [12/13] RUN ant jars tools
#16 0.298 Buildfile: /bio-formats-build/bioformats/build.xml
#16 0.631 [echo] isSnapshot = true
#16 2.738
#16 2.738 copy-jars:
#16 2.738
#16 2.738 deps-formats-api:
#16 2.818 [echo] isSnapshot = true
#16 2.879
#16 2.879 install-pom:
#16 3.051 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.4.0-SNAPSHOT/pom-bio-formats-8.4.0-SNAPSHOT.pom
#16 3.060 [resolver:install] Installing ome:pom-bio-formats:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 3.064 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 3.066
#16 3.066 jar-formats-api:
#16 3.177 [echo] isSnapshot = true
#16 3.337
#16 3.337 init-title:
#16 3.338 [echo] ----------=========== formats-api ===========----------
#16 3.338
#16 3.338 init-timestamp:
#16 3.344
#16 3.344 init:
#16 3.344
#16 3.344 copy-resources:
#16 3.346 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 3.358 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 3.361
#16 3.361 compile:
#16 3.545 [resolver:resolve] Resolving artifacts
#16 3.571 [javac] Compiling 54 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 3.782 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 4.483 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.483 [javac] import loci.common.ReflectedUniverse;
#16 4.483 [javac] ^
#16 4.684 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.684 [javac] int currentIndex = r.getCoreIndex();
#16 4.684 [javac] ^
#16 4.684 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.684 [javac] r.setCoreIndex(coreIndex);
#16 4.684 [javac] ^
#16 4.684 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.684 [javac] r.setCoreIndex(currentIndex);
#16 4.684 [javac] ^
#16 4.885 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.885 [javac] public void setCoreIndex(int no) {
#16 4.885 [javac] ^
#16 4.885 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.885 [javac] public int getCoreIndex() {
#16 4.885 [javac] ^
#16 4.885 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.885 [javac] public int coreIndexToSeries(int index)
#16 4.885 [javac] ^
#16 4.885 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.885 [javac] public int seriesToCoreIndex(int series)
#16 4.885 [javac] ^
#16 4.885 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.885 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 4.885 [javac] ^
#16 4.885 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.886 [javac] if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 4.886 [javac] ^
#16 4.886 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.886 [javac] if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 4.886 [javac] ^
#16 4.886 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.886 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 4.886 [javac] ^
#16 4.886 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.886 [javac] core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 4.886 [javac] ^
#16 4.987 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.987 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 4.987 [javac] ^
#16 4.987 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.987 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 4.987 [javac] ^
#16 5.087 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.087 [javac] public void setCoreIndex(int no) {
#16 5.087 [javac] ^
#16 5.087 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.087 [javac] public int getCoreIndex() {
#16 5.087 [javac] ^
#16 5.087 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.087 [javac] public int coreIndexToSeries(int index) {
#16 5.087 [javac] ^
#16 5.087 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.088 [javac] public int seriesToCoreIndex(int series) {
#16 5.088 [javac] ^
#16 5.088 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.088 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 5.088 [javac] ^
#16 5.188 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.188 [javac] return getReader().getCoreMetadataList();
#16 5.188 [javac] ^
#16 5.188 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.188 [javac] return getReader().getCoreIndex();
#16 5.188 [javac] ^
#16 5.188 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.188 [javac] getReader().setCoreIndex(no);
#16 5.188 [javac] ^
#16 5.188 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.189 [javac] return getReader().seriesToCoreIndex(series);
#16 5.189 [javac] ^
#16 5.189 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.189 [javac] return getReader().coreIndexToSeries(index);
#16 5.189 [javac] ^
#16 5.189 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.189 [javac] public void setCoreIndex(int no) {
#16 5.189 [javac] ^
#16 5.189 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.189 [javac] public int getCoreIndex() {
#16 5.189 [javac] ^
#16 5.189 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.189 [javac] public int coreIndexToSeries(int index) {
#16 5.189 [javac] ^
#16 5.189 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.189 [javac] public int seriesToCoreIndex(int series) {
#16 5.189 [javac] ^
#16 5.189 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.189 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 5.189 [javac] ^
#16 5.189 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.190 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 5.190 [javac] ^
#16 5.190 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.190 [javac] return reader.getCoreIndex();
#16 5.190 [javac] ^
#16 5.190 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.190 [javac] reader.setCoreIndex(no);
#16 5.190 [javac] ^
#16 5.190 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.190 [javac] return reader.seriesToCoreIndex(series);
#16 5.190 [javac] ^
#16 5.190 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.190 [javac] return reader.coreIndexToSeries(index);
#16 5.190 [javac] ^
#16 5.391 [javac] Note: Some input files use unchecked or unsafe operations.
#16 5.391 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 5.391 [javac] 36 warnings
#16 5.420
#16 5.420 formats-api.jar:
#16 5.420 [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 5.443 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 5.477 [resolver:install] Using default POM (ome:formats-api:8.4.0-SNAPSHOT)
#16 5.480 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.4.0-SNAPSHOT/formats-api-8.4.0-SNAPSHOT.pom
#16 5.487 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.4.0-SNAPSHOT/formats-api-8.4.0-SNAPSHOT.jar
#16 5.489 [resolver:install] Installing ome:formats-api:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 5.491 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 5.492
#16 5.492 deps-turbojpeg:
#16 5.492
#16 5.492 jar-turbojpeg:
#16 5.592 [echo] isSnapshot = true
#16 5.737
#16 5.737 init-title:
#16 5.737 [echo] ----------=========== turbojpeg ===========----------
#16 5.737
#16 5.737 init-timestamp:
#16 5.738
#16 5.738 init:
#16 5.738
#16 5.738 copy-resources:
#16 5.738 [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 5.739
#16 5.739 compile:
#16 5.749 [resolver:resolve] Resolving artifacts
#16 5.752 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 5.955 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 6.637 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [deprecation] finalize() in Object has been deprecated
#16 6.637 [javac] protected void finalize() throws Throwable {
#16 6.637 [javac] ^
#16 6.637 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [deprecation] finalize() in Object has been deprecated
#16 6.637 [javac] super.finalize();
#16 6.637 [javac] ^
#16 6.637 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [deprecation] finalize() in Object has been deprecated
#16 6.637 [javac] protected void finalize() throws Throwable {
#16 6.637 [javac] ^
#16 6.637 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [deprecation] finalize() in Object has been deprecated
#16 6.637 [javac] super.finalize();
#16 6.637 [javac] ^
#16 6.637 [javac] 5 warnings
#16 6.637
#16 6.637 jar:
#16 6.642 [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 6.837 [resolver:install] Using default POM (ome:turbojpeg:8.4.0-SNAPSHOT)
#16 6.844 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.4.0-SNAPSHOT/turbojpeg-8.4.0-SNAPSHOT.pom
#16 6.847 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.4.0-SNAPSHOT/turbojpeg-8.4.0-SNAPSHOT.jar
#16 6.849 [resolver:install] Installing ome:turbojpeg:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 6.852 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 6.853
#16 6.853 deps-formats-bsd:
#16 6.853
#16 6.853 jar-formats-bsd:
#16 6.978 [echo] isSnapshot = true
#16 7.117
#16 7.117 init-title:
#16 7.117 [echo] ----------=========== formats-bsd ===========----------
#16 7.117
#16 7.117 init-timestamp:
#16 7.118
#16 7.118 init:
#16 7.118
#16 7.118 copy-resources:
#16 7.118 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 7.121 [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 7.122
#16 7.122 compile:
#16 7.335 [resolver:resolve] Resolving artifacts
#16 7.362 [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 7.571 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 8.672 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 8.672 [javac] import loci.common.ReflectedUniverse;
#16 8.672 [javac] ^
#16 9.073 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.073 [javac] core.size() != reader.getCoreMetadataList().size())
#16 9.073 [javac] ^
#16 9.073 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.073 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 9.073 [javac] ^
#16 9.173 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.173 [javac] int n = reader.getCoreMetadataList().size();
#16 9.173 [javac] ^
#16 9.173 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 9.173 [javac] reader.setCoreIndex(coreIndex);
#16 9.173 [javac] ^
#16 9.174 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.174 [javac] int n = reader.getCoreMetadataList().size();
#16 9.174 [javac] ^
#16 9.174 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.174 [javac] int n = reader.getCoreMetadataList().size();
#16 9.174 [javac] ^
#16 9.174 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 9.174 [javac] if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 9.174 [javac] ^
#16 9.174 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.174 [javac] int n = reader.getCoreMetadataList().size();
#16 9.174 [javac] ^
#16 9.174 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 9.174 [javac] if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 9.174 [javac] ^
#16 9.174 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.174 [javac] int n = reader.getCoreMetadataList().size();
#16 9.174 [javac] ^
#16 9.174 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 9.174 [javac] if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 9.174 [javac] ^
#16 9.174 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 9.174 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 9.174 [javac] ^
#16 9.175 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 9.175 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 9.175 [javac] ^
#16 9.175 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.175 [javac] return noStitch ? reader.getCoreMetadataList() : core;
#16 9.175 [javac] ^
#16 9.175 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.175 [javac] if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 9.175 [javac] ^
#16 9.175 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.175 [javac] seriesCount = reader.getCoreMetadataList().size();
#16 9.175 [javac] ^
#16 9.175 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.175 [javac] if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 9.176 [javac] ^
#16 9.176 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.176 [javac] if (reader.getCoreMetadataList().size() > 1) return 0;
#16 9.176 [javac] ^
#16 9.176 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.176 [javac] r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 9.176 [javac] ^
#16 9.276 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.276 [javac] int seriesCount = unwrap().getCoreMetadataList().size();
#16 9.276 [javac] ^
#16 9.477 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 9.477 [javac] BitWriter out = new BitWriter();
#16 9.477 [javac] ^
#16 9.477 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 9.477 [javac] BitWriter out = new BitWriter();
#16 9.477 [javac] ^
#16 9.577 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 9.577 [javac] return new Double(v);
#16 9.577 [javac] ^
#16 10.28 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2106: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 10.28 [javac] return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#16 10.28 [javac] ^
#16 10.28 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2113: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 10.28 [javac] return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#16 10.28 [javac] ^
#16 10.28 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2120: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 10.28 [javac] return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#16 10.28 [javac] ^
#16 10.38 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 10.38 [javac] channelNames.put(new Integer(channelNames.size()), value);
#16 10.38 [javac] ^
#16 10.58 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:622: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.58 [javac] OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 10.58 [javac] ^
#16 10.68 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 10.68 [javac] StreamTokenizer st = new StreamTokenizer(in);
#16 10.68 [javac] ^
#16 10.78 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/SlideBook7Reader.java:3095: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 10.78 [javac] store.setPlaneExposureTime(new Time(new Double(expTime), UNITS.MILLISECOND), capture, imageIndex);
#16 10.78 [javac] ^
#16 10.78 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.78 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 10.78 [javac] ^
#16 10.78 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 10.78 [javac] protected ReflectedUniverse r;
#16 10.78 [javac] ^
#16 10.78 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 10.78 [javac] r = new ReflectedUniverse();
#16 10.78 [javac] ^
#16 10.88 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1043: warning: [deprecation] NM in UNITS has been deprecated
#16 10.88 [javac] wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 10.88 [javac] ^
#16 10.88 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1075: warning: [deprecation] MM in UNITS has been deprecated
#16 10.88 [javac] sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 10.88 [javac] ^
#16 10.88 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1088: warning: [deprecation] MM in UNITS has been deprecated
#16 10.88 [javac] String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 10.88 [javac] ^
#16 10.88 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1089: warning: [deprecation] MM in UNITS has been deprecated
#16 10.88 [javac] String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 10.88 [javac] ^
#16 10.88 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1108: warning: [deprecation] MM in UNITS has been deprecated
#16 10.88 [javac] volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 10.88 [javac] ^
#16 10.88 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1112: warning: [deprecation] MM in UNITS has been deprecated
#16 10.88 [javac] volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 10.88 [javac] ^
#16 10.88 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1118: warning: [deprecation] MM in UNITS has been deprecated
#16 10.88 [javac] volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 10.88 [javac] ^
#16 10.88 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1166: warning: [deprecation] MM in UNITS has been deprecated
#16 10.88 [javac] offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 10.88 [javac] ^
#16 10.88 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1170: warning: [deprecation] MM in UNITS has been deprecated
#16 10.88 [javac] offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 10.88 [javac] ^
#16 10.98 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 10.98 [javac] ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 10.98 [javac] ^
#16 10.98 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 10.98 [javac] ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 10.98 [javac] ^
#16 10.98 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 10.98 [javac] ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 10.98 [javac] ^
#16 10.98 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 10.98 [javac] ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 10.98 [javac] ^
#16 10.98 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 10.98 [javac] libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 10.98 [javac] ^
#16 11.07 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:320: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 11.07 [javac] doubleResult[i] = new Double(result.get(i).doubleValue());
#16 11.07 [javac] ^
#16 11.07 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:342: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 11.07 [javac] result[i] = new Double(readNumber().doubleValue());
#16 11.07 [javac] ^
#16 11.07 [javac] Note: Some input files use unchecked or unsafe operations.
#16 11.07 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 11.07 [javac] 51 warnings
#16 11.07
#16 11.07 formats-bsd.jar:
#16 11.08 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 11.20 [resolver:install] Using default POM (ome:formats-bsd:8.4.0-SNAPSHOT)
#16 11.20 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.4.0-SNAPSHOT/formats-bsd-8.4.0-SNAPSHOT.pom
#16 11.21 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.4.0-SNAPSHOT/formats-bsd-8.4.0-SNAPSHOT.jar
#16 11.21 [resolver:install] Installing ome:formats-bsd:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 11.21 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 11.21
#16 11.21 deps-formats-gpl:
#16 11.21
#16 11.21 jar-formats-gpl:
#16 11.30 [echo] isSnapshot = true
#16 11.44
#16 11.44 init-title:
#16 11.44 [echo] ----------=========== formats-gpl ===========----------
#16 11.44
#16 11.44 init-timestamp:
#16 11.44
#16 11.44 init:
#16 11.44
#16 11.44 copy-resources:
#16 11.44 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 11.44 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 11.44
#16 11.44 compile:
#16 11.82 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 12.07 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 12.46 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom (0 B at 0.0 KB/sec)
#16 12.47 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 12.48 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 12.60 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom (0 B at 0.0 KB/sec)
#16 12.61 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 12.62 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 12.74 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom (0 B at 0.0 KB/sec)
#16 12.78 [resolver:resolve] Resolving artifacts
#16 12.79 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 12.79 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 12.84 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 12.84 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 13.19 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (0 B at 0.0 KB/sec)
#16 13.23 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (0 B at 0.0 KB/sec)
#16 13.25 [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 13.46 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 14.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 14.76 [javac] import loci.formats.codec.BitWriter;
#16 14.76 [javac] ^
#16 14.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 14.76 [javac] import loci.formats.codec.BitWriter;
#16 14.76 [javac] ^
#16 16.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 16.76 [javac] LOGGER.trace("Parsing tokens: {}", tokens);
#16 16.76 [javac] ^
#16 16.76 [javac] cast to Object for a varargs call
#16 16.76 [javac] cast to Object[] for a non-varargs call and to suppress this warning
#16 16.86 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1269: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 16.86 [javac] BitWriter bits = null;
#16 16.86 [javac] ^
#16 16.86 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1271: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 16.86 [javac] bits = new BitWriter(planes[index].length / 8);
#16 16.86 [javac] ^
#16 17.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 17.16 [javac] CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 17.16 [javac] ^
#16 17.46 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.46 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 17.46 [javac] ^
#16 17.46 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.46 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 17.46 [javac] ^
#16 17.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:170: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 17.76 [javac] Variable variable = group.findVariable(variableName);
#16 17.76 [javac] ^
#16 17.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:197: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 17.76 [javac] Variable variable = group.findVariable(variableName);
#16 17.76 [javac] ^
#16 17.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:200: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 17.76 [javac] List<Attribute> attributes = variable.getAttributes();
#16 17.76 [javac] ^
#16 17.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getName() in CDMNode has been deprecated
#16 17.76 [javac] String groupName = group.getName();
#16 17.76 [javac] ^
#16 17.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:239: warning: [deprecation] getAttributes() in Group has been deprecated
#16 17.76 [javac] List<Attribute> attributes = group.getAttributes();
#16 17.76 [javac] ^
#16 17.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:247: warning: [deprecation] getName() in CDMNode has been deprecated
#16 17.76 [javac] String variableName = variable.getName();
#16 17.76 [javac] ^
#16 17.76 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:270: warning: [deprecation] findGroup(String) in Group has been deprecated
#16 17.76 [javac] Group nextParent = parent.findGroup(token);
#16 17.76 [javac] ^
#16 17.80 [javac] Note: Some input files use unchecked or unsafe operations.
#16 17.80 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 17.80 [javac] 16 warnings
#16 17.80
#16 17.80 formats-gpl.jar:
#16 17.81 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 17.96 [resolver:install] Using default POM (ome:formats-gpl:8.4.0-SNAPSHOT)
#16 17.97 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.4.0-SNAPSHOT/formats-gpl-8.4.0-SNAPSHOT.pom
#16 17.97 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.4.0-SNAPSHOT/formats-gpl-8.4.0-SNAPSHOT.jar
#16 17.97 [resolver:install] Installing ome:formats-gpl:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 17.97 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 17.98
#16 17.98 deps-bio-formats-plugins:
#16 17.98
#16 17.98 jar-bio-formats-plugins:
#16 18.07 [echo] isSnapshot = true
#16 18.20
#16 18.20 init-title:
#16 18.20 [echo] ----------=========== bio-formats_plugins ===========----------
#16 18.20
#16 18.20 init-timestamp:
#16 18.20
#16 18.20 init:
#16 18.20
#16 18.20 copy-resources:
#16 18.20 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.20 [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.21
#16 18.21 compile:
#16 18.45 [resolver:resolve] Resolving artifacts
#16 18.47 [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.68 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 19.48 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.48 [javac] import loci.common.ReflectedUniverse;
#16 19.48 [javac] ^
#16 19.48 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.48 [javac] import loci.common.ReflectedUniverse;
#16 19.48 [javac] ^
#16 19.98 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 19.98 [javac] "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 19.98 [javac] ^
#16 20.08 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.08 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 20.08 [javac] ^
#16 20.08 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.08 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 20.08 [javac] ^
#16 20.18 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.18 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 20.18 [javac] ^
#16 20.18 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.18 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 20.18 [javac] ^
#16 20.58 [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 20.58 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 20.58 [javac] 8 warnings
#16 20.63
#16 20.63 bio-formats-plugins.jar:
#16 20.63 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 20.67 [resolver:install] Using default POM (ome:bio-formats_plugins:8.4.0-SNAPSHOT)
#16 20.67 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.4.0-SNAPSHOT/bio-formats_plugins-8.4.0-SNAPSHOT.pom
#16 20.67 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.4.0-SNAPSHOT/bio-formats_plugins-8.4.0-SNAPSHOT.jar
#16 20.67 [resolver:install] Installing ome:bio-formats_plugins:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 20.68 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 20.68
#16 20.68 deps-bio-formats-tools:
#16 20.68
#16 20.68 jar-bio-formats-tools:
#16 20.78 [echo] isSnapshot = true
#16 20.90
#16 20.90 init-title:
#16 20.90 [echo] ----------=========== bio-formats-tools ===========----------
#16 20.90
#16 20.90 init-timestamp:
#16 20.90
#16 20.90 init:
#16 20.90
#16 20.90 copy-resources:
#16 20.90 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 20.91
#16 20.91 compile:
#16 21.14 [resolver:resolve] Resolving artifacts
#16 21.15 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 21.36 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 22.46 [javac] 1 warning
#16 22.46
#16 22.46 bio-formats-tools.jar:
#16 22.46 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 22.47 [resolver:install] Using default POM (ome:bio-formats-tools:8.4.0-SNAPSHOT)
#16 22.47 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.4.0-SNAPSHOT/bio-formats-tools-8.4.0-SNAPSHOT.pom
#16 22.47 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.4.0-SNAPSHOT/bio-formats-tools-8.4.0-SNAPSHOT.jar
#16 22.48 [resolver:install] Installing ome:bio-formats-tools:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 22.48 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 22.48
#16 22.48 deps-tests:
#16 22.48
#16 22.48 jar-tests:
#16 22.57 [echo] isSnapshot = true
#16 22.70
#16 22.70 init-title:
#16 22.70 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 22.70
#16 22.70 init-timestamp:
#16 22.70
#16 22.70 init:
#16 22.70
#16 22.70 copy-resources:
#16 22.70 [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 22.70
#16 22.70 compile:
#16 22.99 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.06 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.42 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.44 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.85 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.28 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#16 24.30 [resolver:resolve] Resolving artifacts
#16 24.31 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.35 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.70 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.71 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.11 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.47 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 25.47 [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 25.68 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 26.68 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:676: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 26.68 [javac] int index = unflattenedReader.getCoreIndex();
#16 26.68 [javac] ^
#16 26.68 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:677: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 26.68 [javac] reader.setCoreIndex(index);
#16 26.68 [javac] ^
#16 26.88 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2341: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 26.88 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 26.88 [javac] ^
#16 26.88 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2507: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 26.88 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 26.88 [javac] ^
#16 27.18 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 27.18 [javac] FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 27.18 [javac] ^
#16 27.18 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 27.18 [javac] FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 27.18 [javac] ^
#16 27.18 [javac] Note: Some input files use unchecked or unsafe operations.
#16 27.18 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 27.18 [javac] 7 warnings
#16 27.26
#16 27.26 tests.jar:
#16 27.26 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 27.27 [resolver:install] Using default POM (ome:test-suite:8.4.0-SNAPSHOT)
#16 27.28 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.4.0-SNAPSHOT/test-suite-8.4.0-SNAPSHOT.pom
#16 27.28 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.4.0-SNAPSHOT/test-suite-8.4.0-SNAPSHOT.jar
#16 27.28 [resolver:install] Installing ome:test-suite:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 27.28 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 27.28
#16 27.28 jars:
#16 27.28
#16 27.28 copy-jars:
#16 27.28
#16 27.28 deps-formats-api:
#16 27.33 [echo] isSnapshot = true
#16 27.37
#16 27.37 install-pom:
#16 27.51 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.4.0-SNAPSHOT/pom-bio-formats-8.4.0-SNAPSHOT.pom
#16 27.51 [resolver:install] Installing ome:pom-bio-formats:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 27.51 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 27.51
#16 27.51 jar-formats-api:
#16 27.60 [echo] isSnapshot = true
#16 27.73
#16 27.73 init-title:
#16 27.73 [echo] ----------=========== formats-api ===========----------
#16 27.73
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#16 27.73
#16 27.73 init:
#16 27.73
#16 27.73 copy-resources:
#16 27.73
#16 27.73 compile:
#16 27.86 [resolver:resolve] Resolving artifacts
#16 27.86
#16 27.86 formats-api.jar:
#16 27.88 [resolver:install] Using default POM (ome:formats-api:8.4.0-SNAPSHOT)
#16 27.89 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.4.0-SNAPSHOT/formats-api-8.4.0-SNAPSHOT.pom
#16 27.89 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.4.0-SNAPSHOT/formats-api-8.4.0-SNAPSHOT.jar
#16 27.89 [resolver:install] Installing ome:formats-api:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 27.89 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 27.89
#16 27.89 deps-turbojpeg:
#16 27.89
#16 27.89 jar-turbojpeg:
#16 27.98 [echo] isSnapshot = true
#16 28.10
#16 28.10 init-title:
#16 28.10 [echo] ----------=========== turbojpeg ===========----------
#16 28.10
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#16 28.10
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#16 28.10
#16 28.10 compile:
#16 28.11 [resolver:resolve] Resolving artifacts
#16 28.11
#16 28.11 jar:
#16 28.12 [resolver:install] Using default POM (ome:turbojpeg:8.4.0-SNAPSHOT)
#16 28.12 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.4.0-SNAPSHOT/turbojpeg-8.4.0-SNAPSHOT.pom
#16 28.12 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.4.0-SNAPSHOT/turbojpeg-8.4.0-SNAPSHOT.jar
#16 28.13 [resolver:install] Installing ome:turbojpeg:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 28.13 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 28.13
#16 28.13 deps-formats-bsd:
#16 28.13
#16 28.13 jar-formats-bsd:
#16 28.22 [echo] isSnapshot = true
#16 28.35
#16 28.35 init-title:
#16 28.35 [echo] ----------=========== formats-bsd ===========----------
#16 28.35
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#16 28.35
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#16 28.35
#16 28.35 copy-resources:
#16 28.35
#16 28.35 compile:
#16 28.55 [resolver:resolve] Resolving artifacts
#16 28.57
#16 28.57 formats-bsd.jar:
#16 28.60 [resolver:install] Using default POM (ome:formats-bsd:8.4.0-SNAPSHOT)
#16 28.60 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.4.0-SNAPSHOT/formats-bsd-8.4.0-SNAPSHOT.pom
#16 28.60 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.4.0-SNAPSHOT/formats-bsd-8.4.0-SNAPSHOT.jar
#16 28.60 [resolver:install] Installing ome:formats-bsd:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 28.61 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 28.61
#16 28.61 deps-formats-gpl:
#16 28.61
#16 28.61 jar-formats-gpl:
#16 28.69 [echo] isSnapshot = true
#16 28.82
#16 28.82 init-title:
#16 28.82 [echo] ----------=========== formats-gpl ===========----------
#16 28.82
#16 28.82 init-timestamp:
#16 28.82
#16 28.82 init:
#16 28.82
#16 28.82 copy-resources:
#16 28.82
#16 28.82 compile:
#16 29.04 [resolver:resolve] Resolving artifacts
#16 29.06
#16 29.06 formats-gpl.jar:
#16 29.15 [resolver:install] Using default POM (ome:formats-gpl:8.4.0-SNAPSHOT)
#16 29.15 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.4.0-SNAPSHOT/formats-gpl-8.4.0-SNAPSHOT.pom
#16 29.15 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.4.0-SNAPSHOT/formats-gpl-8.4.0-SNAPSHOT.jar
#16 29.15 [resolver:install] Installing ome:formats-gpl:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 29.15 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 29.16
#16 29.16 deps-bio-formats-plugins:
#16 29.16
#16 29.16 jar-bio-formats-plugins:
#16 29.24 [echo] isSnapshot = true
#16 29.37
#16 29.37 init-title:
#16 29.37 [echo] ----------=========== bio-formats_plugins ===========----------
#16 29.37
#16 29.37 init-timestamp:
#16 29.37
#16 29.37 init:
#16 29.37
#16 29.37 copy-resources:
#16 29.37
#16 29.37 compile:
#16 29.60 [resolver:resolve] Resolving artifacts
#16 29.61
#16 29.61 bio-formats-plugins.jar:
#16 29.62 [resolver:install] Using default POM (ome:bio-formats_plugins:8.4.0-SNAPSHOT)
#16 29.63 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.4.0-SNAPSHOT/bio-formats_plugins-8.4.0-SNAPSHOT.pom
#16 29.63 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.4.0-SNAPSHOT/bio-formats_plugins-8.4.0-SNAPSHOT.jar
#16 29.63 [resolver:install] Installing ome:bio-formats_plugins:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 29.63 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 29.63
#16 29.63 deps-bio-formats-tools:
#16 29.63
#16 29.63 jar-bio-formats-tools:
#16 29.72 [echo] isSnapshot = true
#16 29.84
#16 29.84 init-title:
#16 29.84 [echo] ----------=========== bio-formats-tools ===========----------
#16 29.84
#16 29.84 init-timestamp:
#16 29.84
#16 29.84 init:
#16 29.84
#16 29.84 copy-resources:
#16 29.85
#16 29.85 compile:
#16 30.09 [resolver:resolve] Resolving artifacts
#16 30.10
#16 30.10 bio-formats-tools.jar:
#16 30.11 [resolver:install] Using default POM (ome:bio-formats-tools:8.4.0-SNAPSHOT)
#16 30.11 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.4.0-SNAPSHOT/bio-formats-tools-8.4.0-SNAPSHOT.pom
#16 30.11 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.4.0-SNAPSHOT/bio-formats-tools-8.4.0-SNAPSHOT.jar
#16 30.11 [resolver:install] Installing ome:bio-formats-tools:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 30.11 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 30.11
#16 30.11 deps-tests:
#16 30.11
#16 30.11 jar-tests:
#16 30.20 [echo] isSnapshot = true
#16 30.32
#16 30.32 init-title:
#16 30.32 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 30.32
#16 30.32 init-timestamp:
#16 30.33
#16 30.33 init:
#16 30.33
#16 30.33 copy-resources:
#16 30.33
#16 30.33 compile:
#16 30.55 [resolver:resolve] Resolving artifacts
#16 30.56
#16 30.56 tests.jar:
#16 30.57 [resolver:install] Using default POM (ome:test-suite:8.4.0-SNAPSHOT)
#16 30.57 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.4.0-SNAPSHOT/test-suite-8.4.0-SNAPSHOT.pom
#16 30.57 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.4.0-SNAPSHOT/test-suite-8.4.0-SNAPSHOT.jar
#16 30.57 [resolver:install] Installing ome:test-suite:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 30.57 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 30.57
#16 30.57 jars:
#16 30.57
#16 30.57 tools:
#16 30.57 [echo] ----------=========== bioformats_package ===========----------
#16 30.66 [echo] isSnapshot = true
#16 30.78
#16 30.78 init-timestamp:
#16 30.78
#16 30.78 bundle:
#16 31.02 [resolver:resolve] Resolving artifacts
#16 31.03 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.4.0-SNAPSHOT/bio-formats_plugins-8.4.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.06 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.1.1-SNAPSHOT/ome-common-6.1.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.09 [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.12 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.13 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.20 [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.22 [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.28 [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.30 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.14.2/jackson-databind-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.56 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.62 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.64 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.71 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.72 [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.73 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.73 [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.7/joda-time-2.12.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.93 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.1-jre/guava-32.0.1-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.50 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.50 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.50 [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.51 [unzip] Expanding: /home/build/.m2/repository/org/checkerframework/checker-qual/3.33.0/checker-qual-3.33.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.60 [unzip] Expanding: /home/build/.m2/repository/com/google/errorprone/error_prone_annotations/2.18.0/error_prone_annotations-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.61 [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.62 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.5.1-SNAPSHOT/ome-xml-6.5.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.69 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.5.1-SNAPSHOT/specification-6.5.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.76 [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/8.4.0-SNAPSHOT/formats-api-8.4.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.78 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.1.2-SNAPSHOT/ome-codecs-1.1.2-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.79 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-jai/0.1.6-SNAPSHOT/ome-jai-0.1.6-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.95 [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.4.0-SNAPSHOT/formats-bsd-8.4.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.04 [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.4.0-SNAPSHOT/turbojpeg-8.4.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.09 [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.10 [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-lang3/3.18.0/commons-lang3-3.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.22 [unzip] Expanding: /home/build/.m2/repository/org/perf4j/perf4j/0.9.16/perf4j-0.9.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.24 [unzip] Expanding: /home/build/.m2/repository/cisd/jhdf5/19.04.1/jhdf5-19.04.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.79 [unzip] Expanding: /home/build/.m2/repository/cisd/base/18.09.0/base-18.09.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.81 [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.85 [unzip] Expanding: /home/build/.m2/repository/com/drewnoakes/metadata-extractor/2.18.0/metadata-extractor-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.97 [unzip] Expanding: /home/build/.m2/repository/com/adobe/xmp/xmpcore/6.1.11/xmpcore-6.1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.99 [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.01 [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.02 [unzip] Expanding: /home/build/.m2/repository/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.29 [unzip] Expanding: /home/build/.m2/repository/xml-apis/xml-apis/1.4.01/xml-apis-1.4.01.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.38 [unzip] Expanding: /home/build/.m2/repository/org/yaml/snakeyaml/2.0/snakeyaml-2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.44 [unzip] Expanding: /home/build/.m2/repository/ome/formats-gpl/8.4.0-SNAPSHOT/formats-gpl-8.4.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.56 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-mdbtools/5.3.5-SNAPSHOT/ome-mdbtools-5.3.5-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.58 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/metakit/5.3.10-SNAPSHOT/metakit-5.3.10-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.58 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-poi/5.3.11-SNAPSHOT/ome-poi-5.3.11-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.74 [unzip] Expanding: /home/build/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.75 [unzip] Expanding: /home/build/.m2/repository/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.29 [unzip] Expanding: /home/build/.m2/repository/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.31 [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.44 [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.50 [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.13/httpmime-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.51 [unzip] Expanding: /home/build/.m2/repository/com/google/re2j/re2j/1.3/re2j-1.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.52 [unzip] Expanding: /home/build/.m2/repository/commons-math/commons-math/1.2/commons-math-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.59 [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/0.27/aircompressor-0.27.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.62 [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.49.1.0/sqlite-jdbc-3.49.1.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.05 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.07 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.08 [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.09 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.4.0-SNAPSHOT/bio-formats-tools-8.4.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.10 [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.13 [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.58 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.15/logback-core-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.70 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.15/logback-classic-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.14 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 44.36 [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 45.18 [resolver:install] Using default POM (ome:bioformats_package:8.4.0-SNAPSHOT)
#16 45.18 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.4.0-SNAPSHOT/bioformats_package-8.4.0-SNAPSHOT.pom
#16 45.19 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.4.0-SNAPSHOT/bioformats_package-8.4.0-SNAPSHOT.jar
#16 45.23 [resolver:install] Installing ome:bioformats_package:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 45.23 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 45.24
#16 45.24 BUILD SUCCESSFUL
#16 45.24 Total time: 44 seconds
#16 DONE 45.4s
#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.0s
#18 exporting to image
#18 exporting layers
#18 exporting layers 4.0s done
#18 writing image sha256:cf0443f46a4602738fdcd5036368d8f02317294a1ad0d05d92c32e8be273acf9 done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 4.0s
[33m1 warning found (use docker --debug to expand):
[0m - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS
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