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+ export BASE_REPO=omero-matlab.git
+ BASE_REPO=omero-matlab.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-matlab-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-matlab-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-07-18 00:44:35,887 [  scc.config] DEBUG Found github.token
2025-07-18 00:44:35,889 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:36,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-18 00:44:36,321 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:36,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-18 00:44:36,741 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:36,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-07-18 00:44:36,893 [      scc.gh] DEBUG 2887 remaining from 5000 (Reset at 00:07
2025-07-18 00:44:36,893 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-18 00:44:36,896 [     scc.git] DEBUG Check current status
2025-07-18 00:44:36,896 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-18 00:44:36,898 [     scc.git] DEBUG 7d4ddff change date
2025-07-18 00:44:36,899 [     scc.git] DEBUG Calling 'git submodule status'
2025-07-18 00:44:36,940 [  scc.config] DEBUG Found remote.origin.url
2025-07-18 00:44:37,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:37,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-07-18 00:44:37,703 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:37,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-18 00:44:38,227 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:38,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-18 00:44:38,664 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:38,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-18 00:44:39,135 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:39,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-18 00:44:39,326 [     scc.git] DEBUG Resetting...
2025-07-18 00:44:39,326 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-07-18 00:44:39,330 [     scc.git] DEBUG HEAD is now at 7d4ddff change date
2025-07-18 00:44:39,330 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-07-18 00:44:39,371 [     scc.git] DEBUG Check current status
2025-07-18 00:44:39,371 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-18 00:44:39,373 [     scc.git] DEBUG 7d4ddff change date
2025-07-18 00:44:39,373 [     scc.git] DEBUG Calling 'git submodule status'
2025-07-18 00:44:39,413 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-07-18 00:44:39,413 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-07-18 00:44:39,413 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-07-18 00:44:39,413 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-07-18 00:44:39,413 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-07-18 00:44:39,413 [    scc.repo] DEBUG ## PRs found:
2025-07-18 00:44:39,577 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:39,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-07-18 00:44:40,096 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:40,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-07-18 00:44:40,325 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-07-18 00:44:40,325 [    scc.repo] DEBUG ## Branches found:
2025-07-18 00:44:40,325 [     scc.git] DEBUG Get sha1 of %s
2025-07-18 00:44:40,325 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-18 00:44:40,328 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-18 00:44:40,330 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-18 00:44:40,330 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-18 00:44:40,333 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-18 00:44:40,336 [     scc.git] DEBUG Already up to date.

2025-07-18 00:44:40,336 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-07-18 00:44:40,635 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-07-18 00:44:40,635 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-07-18 00:44:40,640 [     scc.git] DEBUG ## Unique users: []
2025-07-18 00:44:40,640 [     scc.git] DEBUG Get sha1 of %s
2025-07-18 00:44:40,640 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-18 00:44:40,642 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-07-18 00:44:40,645 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-18 00:44:40,648 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-07-18 00:44:40,656 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-18 00:44:40,659 [     scc.git] DEBUG  .github/workflows/gradle.yml | 19 ++++++++++++-------
2025-07-18 00:44:40,659 [     scc.git] DEBUG  build.gradle                 |  4 ++--
2025-07-18 00:44:40,659 [     scc.git] DEBUG  2 files changed, 14 insertions(+), 9 deletions(-)
2025-07-18 00:44:40,660 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:40,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-18 00:44:40,846 [     scc.git] DEBUG Calling 'git submodule update'
2025-07-18 00:44:40,886 [     scc.git] DEBUG Get sha1 of %s
2025-07-18 00:44:40,886 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-18 00:44:40,888 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-07-18 00:44:40,892 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f6398d0fe90> has no local changes
2025-07-18 00:44:40,892 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#436 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/436/)'
2025-07-18 00:44:40,899 [     scc.git] DEBUG [detached HEAD 04bb856] merge master -Dorg -Snone
2025-07-18 00:44:40,899 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-07-18 00:44:40,899 [   scc.merge] INFO  Already up to date.
2025-07-18 00:44:40,900 [   scc.merge] INFO  
2025-07-18 00:44:40,900 [   scc.merge] INFO  Merged PRs:
2025-07-18 00:44:40,900 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-07-18 00:44:40,900 [   scc.merge] INFO  
2025-07-18 00:44:40,900 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-07-18 00:44:40,900 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2025-07-18 00:44:41,342 [  scc.config] DEBUG Found github.token
2025-07-18 00:44:41,343 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:41,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-18 00:44:41,765 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:41,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-18 00:44:42,191 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:42,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-07-18 00:44:42,362 [      scc.gh] DEBUG 2877 remaining from 5000 (Reset at 00:07
2025-07-18 00:44:42,363 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-18 00:44:42,365 [     scc.git] DEBUG Check current status
2025-07-18 00:44:42,366 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-18 00:44:42,368 [     scc.git] DEBUG 04bb856 merge master -Dorg -Snone
2025-07-18 00:44:42,368 [     scc.git] DEBUG Calling 'git submodule status'
2025-07-18 00:44:42,410 [  scc.config] DEBUG Found remote.origin.url
2025-07-18 00:44:42,614 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:42,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-07-18 00:44:43,180 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:43,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-18 00:44:43,677 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:43,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-18 00:44:44,139 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:44,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-18 00:44:44,561 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:44,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-18 00:44:44,769 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-18 00:44:44,810 [     scc.git] DEBUG Resetting...
2025-07-18 00:44:44,810 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-07-18 00:44:44,814 [     scc.git] DEBUG HEAD is now at 04bb856 merge master -Dorg -Snone
2025-07-18 00:44:44,814 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-07-18 00:44:44,855 [     scc.git] DEBUG Check current status
2025-07-18 00:44:44,855 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-18 00:44:44,857 [     scc.git] DEBUG 04bb856 merge master -Dorg -Snone
2025-07-18 00:44:44,857 [     scc.git] DEBUG Calling 'git submodule status'
2025-07-18 00:44:44,896 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-07-18 00:44:44,896 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-07-18 00:44:44,896 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-07-18 00:44:44,896 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-07-18 00:44:44,896 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-07-18 00:44:44,896 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2025-07-18 00:44:44,896 [    scc.repo] DEBUG ## PRs found:
2025-07-18 00:44:45,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:45,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-07-18 00:44:45,530 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:45,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-07-18 00:44:46,035 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:46,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-07-18 00:44:46,586 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:46,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-18 00:44:47,101 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:47,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-18 00:44:47,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:47,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-07-18 00:44:48,160 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:48,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/statuses/a8d38c69bde53075007fff870c8bb5f671b87737?per_page=1 HTTP/1.1" 200 2
2025-07-18 00:44:48,357 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-07-18 00:44:48,357 [    scc.repo] DEBUG ## Branches found:
2025-07-18 00:44:48,357 [     scc.git] DEBUG Get sha1 of %s
2025-07-18 00:44:48,357 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-18 00:44:48,359 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-18 00:44:48,362 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-18 00:44:48,362 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-18 00:44:48,365 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-18 00:44:48,368 [     scc.git] DEBUG Already up to date.

2025-07-18 00:44:48,368 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-07-18 00:44:48,652 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-07-18 00:44:48,652 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-07-18 00:44:48,657 [     scc.git] DEBUG ## Unique users: []
2025-07-18 00:44:48,657 [     scc.git] DEBUG Get sha1 of %s
2025-07-18 00:44:48,657 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-18 00:44:48,659 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-07-18 00:44:48,662 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-18 00:44:48,664 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-07-18 00:44:48,667 [     scc.git] DEBUG Already up to date.
2025-07-18 00:44:48,668 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-18 00:44:48,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-18 00:44:48,850 [     scc.git] DEBUG Calling 'git submodule update'
2025-07-18 00:44:48,889 [     scc.git] DEBUG Get sha1 of %s
2025-07-18 00:44:48,889 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-18 00:44:48,891 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-18 00:44:48,930 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-07-18 00:44:48,934 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fd0d6591b50> has no local changes
2025-07-18 00:44:48,934 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#436 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/436/)'
2025-07-18 00:44:48,940 [     scc.git] DEBUG [detached HEAD b6ec64b] merge master -Dorg -Ssuccess-only
2025-07-18 00:44:48,940 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-07-18 00:44:48,940 [   scc.merge] INFO  Already up to date.
2025-07-18 00:44:48,940 [   scc.merge] INFO  
2025-07-18 00:44:48,940 [   scc.merge] INFO  Merged PRs:
2025-07-18 00:44:48,940 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-07-18 00:44:48,940 [   scc.merge] INFO  
2025-07-18 00:44:48,940 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-07-18 00:44:48,940 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.10.1 to 5.10.4-SNAPSHOT
Commit all component version changes
[detached HEAD 658dba8] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2025-07-18 00:44:55,120 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-matlab/tree/merge_ci