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+ export BASE_REPO=omero-matlab.git
+ BASE_REPO=omero-matlab.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-matlab-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-matlab-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-07-26 00:58:32,056 [  scc.config] DEBUG Found github.token
2025-07-26 00:58:32,058 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:32,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-26 00:58:32,507 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:32,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-26 00:58:32,963 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:33,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-07-26 00:58:33,134 [      scc.gh] DEBUG 4494 remaining from 5000 (Reset at 01:07
2025-07-26 00:58:33,135 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-26 00:58:33,137 [     scc.git] DEBUG Check current status
2025-07-26 00:58:33,137 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-26 00:58:33,140 [     scc.git] DEBUG 7d4ddff change date
2025-07-26 00:58:33,140 [     scc.git] DEBUG Calling 'git submodule status'
2025-07-26 00:58:33,183 [  scc.config] DEBUG Found remote.origin.url
2025-07-26 00:58:33,385 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:33,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-07-26 00:58:33,914 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:34,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-26 00:58:34,386 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:34,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-26 00:58:34,813 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:34,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-26 00:58:35,240 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:35,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-26 00:58:35,413 [     scc.git] DEBUG Resetting...
2025-07-26 00:58:35,413 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-07-26 00:58:35,418 [     scc.git] DEBUG HEAD is now at 7d4ddff change date
2025-07-26 00:58:35,418 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-07-26 00:58:35,459 [     scc.git] DEBUG Check current status
2025-07-26 00:58:35,459 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-26 00:58:35,462 [     scc.git] DEBUG 7d4ddff change date
2025-07-26 00:58:35,462 [     scc.git] DEBUG Calling 'git submodule status'
2025-07-26 00:58:35,501 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-07-26 00:58:35,501 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-07-26 00:58:35,502 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-07-26 00:58:35,502 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-07-26 00:58:35,502 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-07-26 00:58:35,502 [    scc.repo] DEBUG ## PRs found:
2025-07-26 00:58:35,663 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:35,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-07-26 00:58:36,164 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:36,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-07-26 00:58:36,398 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-07-26 00:58:36,398 [    scc.repo] DEBUG ## Branches found:
2025-07-26 00:58:36,398 [     scc.git] DEBUG Get sha1 of %s
2025-07-26 00:58:36,398 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-26 00:58:36,400 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-26 00:58:36,402 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-26 00:58:36,402 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-26 00:58:36,405 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-26 00:58:36,408 [     scc.git] DEBUG Already up to date.

2025-07-26 00:58:36,409 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-07-26 00:58:36,681 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-07-26 00:58:36,681 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-07-26 00:58:36,686 [     scc.git] DEBUG ## Unique users: []
2025-07-26 00:58:36,686 [     scc.git] DEBUG Get sha1 of %s
2025-07-26 00:58:36,686 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-26 00:58:36,688 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-07-26 00:58:36,691 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-26 00:58:36,693 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-07-26 00:58:36,701 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-26 00:58:36,704 [     scc.git] DEBUG  .github/workflows/gradle.yml | 19 ++++++++++++-------
2025-07-26 00:58:36,704 [     scc.git] DEBUG  build.gradle                 |  4 ++--
2025-07-26 00:58:36,704 [     scc.git] DEBUG  2 files changed, 14 insertions(+), 9 deletions(-)
2025-07-26 00:58:36,706 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:36,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-26 00:58:36,871 [     scc.git] DEBUG Calling 'git submodule update'
2025-07-26 00:58:36,912 [     scc.git] DEBUG Get sha1 of %s
2025-07-26 00:58:36,912 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-26 00:58:36,914 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-07-26 00:58:36,918 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f8c894fbc90> has no local changes
2025-07-26 00:58:36,918 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#441 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/441/)'
2025-07-26 00:58:36,924 [     scc.git] DEBUG [detached HEAD d798890] merge master -Dorg -Snone
2025-07-26 00:58:36,925 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-07-26 00:58:36,925 [   scc.merge] INFO  Already up to date.
2025-07-26 00:58:36,925 [   scc.merge] INFO  
2025-07-26 00:58:36,925 [   scc.merge] INFO  Merged PRs:
2025-07-26 00:58:36,925 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-07-26 00:58:36,925 [   scc.merge] INFO  
2025-07-26 00:58:36,925 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-07-26 00:58:36,925 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2025-07-26 00:58:37,361 [  scc.config] DEBUG Found github.token
2025-07-26 00:58:37,362 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:37,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-26 00:58:37,813 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:38,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-26 00:58:38,258 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:38,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-07-26 00:58:38,417 [      scc.gh] DEBUG 4470 remaining from 5000 (Reset at 01:07
2025-07-26 00:58:38,418 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-26 00:58:38,420 [     scc.git] DEBUG Check current status
2025-07-26 00:58:38,420 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-26 00:58:38,423 [     scc.git] DEBUG d798890 merge master -Dorg -Snone
2025-07-26 00:58:38,423 [     scc.git] DEBUG Calling 'git submodule status'
2025-07-26 00:58:38,467 [  scc.config] DEBUG Found remote.origin.url
2025-07-26 00:58:38,668 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:38,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-07-26 00:58:39,160 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:39,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-26 00:58:39,636 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:39,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-26 00:58:40,066 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:40,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-26 00:58:40,500 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:40,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-26 00:58:40,678 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-26 00:58:40,719 [     scc.git] DEBUG Resetting...
2025-07-26 00:58:40,720 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-07-26 00:58:40,724 [     scc.git] DEBUG HEAD is now at d798890 merge master -Dorg -Snone
2025-07-26 00:58:40,724 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-07-26 00:58:40,763 [     scc.git] DEBUG Check current status
2025-07-26 00:58:40,763 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-26 00:58:40,766 [     scc.git] DEBUG d798890 merge master -Dorg -Snone
2025-07-26 00:58:40,766 [     scc.git] DEBUG Calling 'git submodule status'
2025-07-26 00:58:40,805 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-07-26 00:58:40,805 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-07-26 00:58:40,805 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-07-26 00:58:40,805 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-07-26 00:58:40,805 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-07-26 00:58:40,805 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2025-07-26 00:58:40,805 [    scc.repo] DEBUG ## PRs found:
2025-07-26 00:58:40,928 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:41,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-07-26 00:58:41,438 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:41,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-07-26 00:58:41,911 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:42,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-07-26 00:58:42,441 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:42,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-26 00:58:42,964 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:43,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-26 00:58:43,422 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:43,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-07-26 00:58:43,906 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:44,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/statuses/a8d38c69bde53075007fff870c8bb5f671b87737?per_page=1 HTTP/1.1" 200 2
2025-07-26 00:58:44,081 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-07-26 00:58:44,081 [    scc.repo] DEBUG ## Branches found:
2025-07-26 00:58:44,081 [     scc.git] DEBUG Get sha1 of %s
2025-07-26 00:58:44,081 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-26 00:58:44,083 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-26 00:58:44,086 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-26 00:58:44,086 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-26 00:58:44,089 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-26 00:58:44,092 [     scc.git] DEBUG Already up to date.

2025-07-26 00:58:44,092 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-07-26 00:58:44,370 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-07-26 00:58:44,370 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-07-26 00:58:44,374 [     scc.git] DEBUG ## Unique users: []
2025-07-26 00:58:44,374 [     scc.git] DEBUG Get sha1 of %s
2025-07-26 00:58:44,374 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-26 00:58:44,377 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-07-26 00:58:44,380 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-26 00:58:44,382 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-07-26 00:58:44,384 [     scc.git] DEBUG Already up to date.
2025-07-26 00:58:44,386 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-26 00:58:44,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-26 00:58:44,568 [     scc.git] DEBUG Calling 'git submodule update'
2025-07-26 00:58:44,609 [     scc.git] DEBUG Get sha1 of %s
2025-07-26 00:58:44,609 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-26 00:58:44,611 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-26 00:58:44,651 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-07-26 00:58:44,654 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8a37afe10> has no local changes
2025-07-26 00:58:44,654 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#441 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/441/)'
2025-07-26 00:58:44,661 [     scc.git] DEBUG [detached HEAD 4056109] merge master -Dorg -Ssuccess-only
2025-07-26 00:58:44,661 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-07-26 00:58:44,661 [   scc.merge] INFO  Already up to date.
2025-07-26 00:58:44,661 [   scc.merge] INFO  
2025-07-26 00:58:44,661 [   scc.merge] INFO  Merged PRs:
2025-07-26 00:58:44,661 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-07-26 00:58:44,661 [   scc.merge] INFO  
2025-07-26 00:58:44,661 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-07-26 00:58:44,661 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.10.1 to 5.10.4-SNAPSHOT
Commit all component version changes
[detached HEAD c1fbb25] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2025-07-26 00:58:50,817 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-matlab/tree/merge_ci