Skip to content

Console Output

+ export BASE_REPO=omero-matlab.git
+ BASE_REPO=omero-matlab.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-matlab-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-matlab-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-07-28 00:59:19,106 [  scc.config] DEBUG Found github.token
2025-07-28 00:59:19,107 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:19,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-28 00:59:19,555 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:19,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-28 00:59:19,982 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:20,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-07-28 00:59:20,148 [      scc.gh] DEBUG 4886 remaining from 5000 (Reset at 01:07
2025-07-28 00:59:20,149 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-28 00:59:20,152 [     scc.git] DEBUG Check current status
2025-07-28 00:59:20,152 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-28 00:59:20,154 [     scc.git] DEBUG 7d4ddff change date
2025-07-28 00:59:20,154 [     scc.git] DEBUG Calling 'git submodule status'
2025-07-28 00:59:20,195 [  scc.config] DEBUG Found remote.origin.url
2025-07-28 00:59:20,399 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:20,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-07-28 00:59:20,905 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:21,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-28 00:59:21,375 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:21,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-28 00:59:21,800 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:21,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-28 00:59:22,233 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:22,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-28 00:59:22,440 [     scc.git] DEBUG Resetting...
2025-07-28 00:59:22,440 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-07-28 00:59:22,444 [     scc.git] DEBUG HEAD is now at 7d4ddff change date
2025-07-28 00:59:22,445 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-07-28 00:59:22,485 [     scc.git] DEBUG Check current status
2025-07-28 00:59:22,485 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-28 00:59:22,487 [     scc.git] DEBUG 7d4ddff change date
2025-07-28 00:59:22,488 [     scc.git] DEBUG Calling 'git submodule status'
2025-07-28 00:59:22,527 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-07-28 00:59:22,527 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-07-28 00:59:22,527 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-07-28 00:59:22,527 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-07-28 00:59:22,528 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-07-28 00:59:22,528 [    scc.repo] DEBUG ## PRs found:
2025-07-28 00:59:22,691 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:22,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-07-28 00:59:23,209 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:23,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-07-28 00:59:23,439 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-07-28 00:59:23,439 [    scc.repo] DEBUG ## Branches found:
2025-07-28 00:59:23,439 [     scc.git] DEBUG Get sha1 of %s
2025-07-28 00:59:23,439 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-28 00:59:23,441 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-28 00:59:23,443 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-28 00:59:23,443 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-28 00:59:23,446 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-28 00:59:23,449 [     scc.git] DEBUG Already up to date.

2025-07-28 00:59:23,449 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-07-28 00:59:23,730 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-07-28 00:59:23,730 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-07-28 00:59:23,734 [     scc.git] DEBUG ## Unique users: []
2025-07-28 00:59:23,734 [     scc.git] DEBUG Get sha1 of %s
2025-07-28 00:59:23,734 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-28 00:59:23,736 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-07-28 00:59:23,739 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-28 00:59:23,741 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-07-28 00:59:23,750 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-28 00:59:23,753 [     scc.git] DEBUG  .github/workflows/gradle.yml | 19 ++++++++++++-------
2025-07-28 00:59:23,753 [     scc.git] DEBUG  build.gradle                 |  4 ++--
2025-07-28 00:59:23,753 [     scc.git] DEBUG  2 files changed, 14 insertions(+), 9 deletions(-)
2025-07-28 00:59:23,754 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:23,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-28 00:59:23,964 [     scc.git] DEBUG Calling 'git submodule update'
2025-07-28 00:59:24,006 [     scc.git] DEBUG Get sha1 of %s
2025-07-28 00:59:24,006 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-28 00:59:24,008 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-07-28 00:59:24,012 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f1423af3310> has no local changes
2025-07-28 00:59:24,012 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#443 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/443/)'
2025-07-28 00:59:24,019 [     scc.git] DEBUG [detached HEAD 8e968ff] merge master -Dorg -Snone
2025-07-28 00:59:24,019 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-07-28 00:59:24,020 [   scc.merge] INFO  Already up to date.
2025-07-28 00:59:24,020 [   scc.merge] INFO  
2025-07-28 00:59:24,020 [   scc.merge] INFO  Merged PRs:
2025-07-28 00:59:24,020 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-07-28 00:59:24,020 [   scc.merge] INFO  
2025-07-28 00:59:24,020 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-07-28 00:59:24,020 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2025-07-28 00:59:24,469 [  scc.config] DEBUG Found github.token
2025-07-28 00:59:24,470 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:24,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-28 00:59:24,894 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:25,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-28 00:59:25,336 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:25,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-07-28 00:59:25,505 [      scc.gh] DEBUG 4876 remaining from 5000 (Reset at 01:07
2025-07-28 00:59:25,505 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-28 00:59:25,508 [     scc.git] DEBUG Check current status
2025-07-28 00:59:25,508 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-28 00:59:25,510 [     scc.git] DEBUG 8e968ff merge master -Dorg -Snone
2025-07-28 00:59:25,510 [     scc.git] DEBUG Calling 'git submodule status'
2025-07-28 00:59:25,553 [  scc.config] DEBUG Found remote.origin.url
2025-07-28 00:59:25,756 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:26,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-07-28 00:59:26,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:26,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-28 00:59:26,754 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:26,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-28 00:59:27,218 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:27,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-28 00:59:27,685 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:27,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-28 00:59:27,867 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-28 00:59:27,908 [     scc.git] DEBUG Resetting...
2025-07-28 00:59:27,908 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-07-28 00:59:27,912 [     scc.git] DEBUG HEAD is now at 8e968ff merge master -Dorg -Snone
2025-07-28 00:59:27,913 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-07-28 00:59:27,953 [     scc.git] DEBUG Check current status
2025-07-28 00:59:27,953 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-28 00:59:27,956 [     scc.git] DEBUG 8e968ff merge master -Dorg -Snone
2025-07-28 00:59:27,956 [     scc.git] DEBUG Calling 'git submodule status'
2025-07-28 00:59:27,994 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-07-28 00:59:27,994 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-07-28 00:59:27,994 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-07-28 00:59:27,994 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-07-28 00:59:27,995 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-07-28 00:59:27,995 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2025-07-28 00:59:27,995 [    scc.repo] DEBUG ## PRs found:
2025-07-28 00:59:28,118 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:28,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-07-28 00:59:28,656 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:28,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-07-28 00:59:29,166 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:29,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-07-28 00:59:29,738 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:30,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-28 00:59:30,288 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:30,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-28 00:59:30,773 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:31,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-07-28 00:59:31,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:31,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/statuses/a8d38c69bde53075007fff870c8bb5f671b87737?per_page=1 HTTP/1.1" 200 2
2025-07-28 00:59:31,498 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-07-28 00:59:31,498 [    scc.repo] DEBUG ## Branches found:
2025-07-28 00:59:31,498 [     scc.git] DEBUG Get sha1 of %s
2025-07-28 00:59:31,498 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-28 00:59:31,501 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-28 00:59:31,503 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-28 00:59:31,503 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-28 00:59:31,506 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-28 00:59:31,509 [     scc.git] DEBUG Already up to date.

2025-07-28 00:59:31,509 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-07-28 00:59:31,794 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-07-28 00:59:31,794 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-07-28 00:59:31,798 [     scc.git] DEBUG ## Unique users: []
2025-07-28 00:59:31,798 [     scc.git] DEBUG Get sha1 of %s
2025-07-28 00:59:31,798 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-28 00:59:31,801 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-07-28 00:59:31,804 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-28 00:59:31,806 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-07-28 00:59:31,809 [     scc.git] DEBUG Already up to date.
2025-07-28 00:59:31,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-28 00:59:31,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-28 00:59:31,992 [     scc.git] DEBUG Calling 'git submodule update'
2025-07-28 00:59:32,032 [     scc.git] DEBUG Get sha1 of %s
2025-07-28 00:59:32,032 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-28 00:59:32,034 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-28 00:59:32,074 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-07-28 00:59:32,078 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f65f2555510> has no local changes
2025-07-28 00:59:32,078 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#443 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/443/)'
2025-07-28 00:59:32,084 [     scc.git] DEBUG [detached HEAD 6ab4ccb] merge master -Dorg -Ssuccess-only
2025-07-28 00:59:32,084 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-07-28 00:59:32,084 [   scc.merge] INFO  Already up to date.
2025-07-28 00:59:32,084 [   scc.merge] INFO  
2025-07-28 00:59:32,084 [   scc.merge] INFO  Merged PRs:
2025-07-28 00:59:32,084 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-07-28 00:59:32,084 [   scc.merge] INFO  
2025-07-28 00:59:32,084 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-07-28 00:59:32,084 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.10.1 to 5.10.4-SNAPSHOT
Commit all component version changes
[detached HEAD d3f649d] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2025-07-28 00:59:38,289 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-matlab/tree/merge_ci