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+ export BASE_REPO=omero-matlab.git
+ BASE_REPO=omero-matlab.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-matlab-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-matlab-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-08-31 01:01:37,122 [  scc.config] DEBUG Found github.token
2025-08-31 01:01:37,123 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:37,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-31 01:01:37,619 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:37,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-31 01:01:38,060 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:38,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-31 01:01:38,272 [      scc.gh] DEBUG 4998 remaining from 5000 (Reset at 02:08
2025-08-31 01:01:38,272 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-31 01:01:38,275 [     scc.git] DEBUG Check current status
2025-08-31 01:01:38,275 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-31 01:01:38,277 [     scc.git] DEBUG 7d4ddff change date
2025-08-31 01:01:38,278 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-31 01:01:38,321 [  scc.config] DEBUG Found remote.origin.url
2025-08-31 01:01:38,524 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:38,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-08-31 01:01:39,091 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:39,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-31 01:01:39,585 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:39,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-31 01:01:40,046 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:40,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-31 01:01:40,514 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:40,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-31 01:01:40,723 [     scc.git] DEBUG Resetting...
2025-08-31 01:01:40,723 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-31 01:01:40,727 [     scc.git] DEBUG HEAD is now at 7d4ddff change date
2025-08-31 01:01:40,727 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-31 01:01:40,768 [     scc.git] DEBUG Check current status
2025-08-31 01:01:40,768 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-31 01:01:40,771 [     scc.git] DEBUG 7d4ddff change date
2025-08-31 01:01:40,771 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-31 01:01:40,811 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-08-31 01:01:40,811 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-08-31 01:01:40,811 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-08-31 01:01:40,811 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-08-31 01:01:40,811 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-08-31 01:01:40,811 [    scc.repo] DEBUG ## PRs found:
2025-08-31 01:01:40,974 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:41,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-08-31 01:01:41,520 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:41,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-08-31 01:01:41,767 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-08-31 01:01:41,768 [    scc.repo] DEBUG ## Branches found:
2025-08-31 01:01:41,768 [     scc.git] DEBUG Get sha1 of %s
2025-08-31 01:01:41,768 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-31 01:01:41,770 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-31 01:01:41,773 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-31 01:01:41,773 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-31 01:01:41,776 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-31 01:01:41,779 [     scc.git] DEBUG Already up to date.

2025-08-31 01:01:41,779 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-08-31 01:01:42,064 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-08-31 01:01:42,064 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-08-31 01:01:42,068 [     scc.git] DEBUG ## Unique users: []
2025-08-31 01:01:42,068 [     scc.git] DEBUG Get sha1 of %s
2025-08-31 01:01:42,068 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-31 01:01:42,071 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-31 01:01:42,074 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-31 01:01:42,076 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-31 01:01:42,084 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-31 01:01:42,087 [     scc.git] DEBUG  .github/workflows/gradle.yml | 19 ++++++++++++-------
2025-08-31 01:01:42,088 [     scc.git] DEBUG  build.gradle                 |  4 ++--
2025-08-31 01:01:42,088 [     scc.git] DEBUG  2 files changed, 14 insertions(+), 9 deletions(-)
2025-08-31 01:01:42,090 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:42,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-31 01:01:42,322 [     scc.git] DEBUG Calling 'git submodule update'
2025-08-31 01:01:42,364 [     scc.git] DEBUG Get sha1 of %s
2025-08-31 01:01:42,364 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-31 01:01:42,367 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-08-31 01:01:42,371 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fb67f8af350> has no local changes
2025-08-31 01:01:42,371 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#468 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/468/)'
2025-08-31 01:01:42,378 [     scc.git] DEBUG [detached HEAD 7a7279c] merge master -Dorg -Snone
2025-08-31 01:01:42,378 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-08-31 01:01:42,378 [   scc.merge] INFO  Already up to date.
2025-08-31 01:01:42,378 [   scc.merge] INFO  
2025-08-31 01:01:42,378 [   scc.merge] INFO  Merged PRs:
2025-08-31 01:01:42,378 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-08-31 01:01:42,378 [   scc.merge] INFO  
2025-08-31 01:01:42,378 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-31 01:01:42,378 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2025-08-31 01:01:42,823 [  scc.config] DEBUG Found github.token
2025-08-31 01:01:42,824 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:43,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-31 01:01:43,314 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:43,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-31 01:01:43,752 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:43,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-31 01:01:43,950 [      scc.gh] DEBUG 4988 remaining from 5000 (Reset at 02:08
2025-08-31 01:01:43,950 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-31 01:01:43,953 [     scc.git] DEBUG Check current status
2025-08-31 01:01:43,953 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-31 01:01:43,955 [     scc.git] DEBUG 7a7279c merge master -Dorg -Snone
2025-08-31 01:01:43,955 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-31 01:01:43,997 [  scc.config] DEBUG Found remote.origin.url
2025-08-31 01:01:44,202 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:44,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-08-31 01:01:44,755 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:45,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-31 01:01:45,254 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:45,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-31 01:01:45,702 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:45,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-31 01:01:46,159 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:46,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-31 01:01:46,380 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-31 01:01:46,421 [     scc.git] DEBUG Resetting...
2025-08-31 01:01:46,421 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-31 01:01:46,425 [     scc.git] DEBUG HEAD is now at 7a7279c merge master -Dorg -Snone
2025-08-31 01:01:46,425 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-31 01:01:46,465 [     scc.git] DEBUG Check current status
2025-08-31 01:01:46,465 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-31 01:01:46,467 [     scc.git] DEBUG 7a7279c merge master -Dorg -Snone
2025-08-31 01:01:46,467 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-31 01:01:46,506 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-08-31 01:01:46,506 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-08-31 01:01:46,506 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-08-31 01:01:46,506 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-08-31 01:01:46,506 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-08-31 01:01:46,506 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2025-08-31 01:01:46,506 [    scc.repo] DEBUG ## PRs found:
2025-08-31 01:01:46,632 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:46,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-08-31 01:01:47,215 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:47,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-08-31 01:01:47,736 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:48,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-08-31 01:01:48,337 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:48,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-31 01:01:48,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:49,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-31 01:01:49,417 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:49,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-08-31 01:01:49,883 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:50,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/statuses/a8d38c69bde53075007fff870c8bb5f671b87737?per_page=1 HTTP/1.1" 200 2
2025-08-31 01:01:50,129 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-08-31 01:01:50,129 [    scc.repo] DEBUG ## Branches found:
2025-08-31 01:01:50,129 [     scc.git] DEBUG Get sha1 of %s
2025-08-31 01:01:50,129 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-31 01:01:50,132 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-31 01:01:50,135 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-31 01:01:50,135 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-31 01:01:50,138 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-31 01:01:50,141 [     scc.git] DEBUG Already up to date.

2025-08-31 01:01:50,141 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-08-31 01:01:50,421 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-08-31 01:01:50,421 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-08-31 01:01:50,425 [     scc.git] DEBUG ## Unique users: []
2025-08-31 01:01:50,425 [     scc.git] DEBUG Get sha1 of %s
2025-08-31 01:01:50,425 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-31 01:01:50,428 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-31 01:01:50,431 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-31 01:01:50,433 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-31 01:01:50,436 [     scc.git] DEBUG Already up to date.
2025-08-31 01:01:50,438 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-31 01:01:50,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-31 01:01:50,641 [     scc.git] DEBUG Calling 'git submodule update'
2025-08-31 01:01:50,682 [     scc.git] DEBUG Get sha1 of %s
2025-08-31 01:01:50,682 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-31 01:01:50,684 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-31 01:01:50,722 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-08-31 01:01:50,726 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7ff3bad1c710> has no local changes
2025-08-31 01:01:50,726 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#468 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/468/)'
2025-08-31 01:01:50,732 [     scc.git] DEBUG [detached HEAD c468182] merge master -Dorg -Ssuccess-only
2025-08-31 01:01:50,733 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-08-31 01:01:50,733 [   scc.merge] INFO  Already up to date.
2025-08-31 01:01:50,733 [   scc.merge] INFO  
2025-08-31 01:01:50,733 [   scc.merge] INFO  Merged PRs:
2025-08-31 01:01:50,733 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-08-31 01:01:50,733 [   scc.merge] INFO  
2025-08-31 01:01:50,733 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-31 01:01:50,733 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.10.1 to 5.10.4-SNAPSHOT
Commit all component version changes
[detached HEAD ecb1af6] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-31 01:01:57,197 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-matlab/tree/merge_ci