Skipping 225 KB..
Full LogTestTestTestTestTestTestTestTestTestTestTestTestTest
2025-08-25 00:40:54,468 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:54,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-08-25 00:40:54,942 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:55,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:40:55,185 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-25 00:40:55,437 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:55,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2025-08-25 00:40:55,955 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:56,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2025-08-25 00:40:56,455 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:56,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-08-25 00:40:57,017 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:57,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:40:57,559 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:57,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-08-25 00:40:58,128 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:58,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:40:58,358 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2025-08-25 00:40:58,358 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:40:58,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-08-25 00:40:58,358 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:40:58,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:58,361 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:40:58,364 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:40:58,364 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:40:58,367 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:40:58,370 [ scc.git] DEBUG Already up to date.
2025-08-25 00:40:58,370 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2025-08-25 00:40:58,656 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-08-25 00:40:58,656 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2025-08-25 00:40:58,661 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head'
2025-08-25 00:40:58,934 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-08-25 00:40:58,934 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD
2025-08-25 00:40:58,939 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:40:58,939 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:40:58,939 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:58,941 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-08-25 00:40:58,946 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:58,948 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-08-25 00:40:58,957 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:40:58,961 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2025-08-25 00:40:58,961 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2025-08-25 00:40:58,961 [ scc.git] DEBUG requirements.txt | 2 +-
2025-08-25 00:40:58,961 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2025-08-25 00:40:58,961 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2025-08-25 00:40:58,961 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2025-08-25 00:40:58,963 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:59,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:40:59,154 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-08-25 00:40:59,158 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:59,161 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-08-25 00:40:59,170 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:40:59,173 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-08-25 00:40:59,173 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-25 00:40:59,406 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:59,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:40:59,606 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:40:59,648 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:40:59,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:59,651 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:40:59,693 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:40:59,697 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693a558950> has no local changes
2025-08-25 00:40:59,697 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:40:59,704 [ scc.git] DEBUG [detached HEAD 5412bbb] merge master -Dorg -Ssuccess-only
2025-08-25 00:40:59,705 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:40:59,705 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:40:59,858 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:00,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2025-08-25 00:41:00,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:00,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2025-08-25 00:41:00,962 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:01,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2025-08-25 00:41:01,476 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:01,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-08-25 00:41:02,045 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:02,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:02,535 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:02,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-08-25 00:41:03,119 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:03,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:41:03,358 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-08-25 00:41:03,610 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:03,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2025-08-25 00:41:04,138 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:04,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2025-08-25 00:41:04,641 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:04,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-08-25 00:41:05,198 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:05,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:05,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:06,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-08-25 00:41:06,292 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:06,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:41:06,829 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-08-25 00:41:06,829 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:06,829 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-08-25 00:41:06,830 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:06,830 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:06,832 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:06,834 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:06,835 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:06,838 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:06,846 [ scc.git] DEBUG Updating 3cd120c..55060a2
2025-08-25 00:41:07,081 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:07,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None
2025-08-25 00:41:07,535 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2025-08-25 00:41:07,820 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-08-25 00:41:07,820 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2025-08-25 00:41:07,824 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2025-08-25 00:41:08,098 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-08-25 00:41:08,098 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2025-08-25 00:41:08,103 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:08,103 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:08,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:08,105 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-08-25 00:41:08,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:08,112 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-08-25 00:41:08,126 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2025-08-25 00:41:08,126 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2025-08-25 00:41:08,126 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-08-25 00:41:08,126 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-08-25 00:41:08,126 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:41:08,126 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:41:08,129 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-25 00:41:08,134 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-08-25 00:41:08,136 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:08,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:08,357 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-08-25 00:41:08,362 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-25 00:41:08,365 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/populate.py
- src/omero_metadata/cli.py
--conflicts
2025-08-25 00:41:08,367 [ scc.config] DEBUG Found github.token
2025-08-25 00:41:08,367 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2025-08-25 00:41:08,367 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2025-08-25 00:41:08,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:08,375 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2025-08-25 00:41:08,390 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-08-25 00:41:08,390 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-08-25 00:41:08,390 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2025-08-25 00:41:08,390 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:41:08,390 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:41:08,393 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-25 00:41:08,399 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-08-25 00:41:08,609 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:08,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:08,818 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7'
2025-08-25 00:41:08,823 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-25 00:41:08,826 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2025-08-25 00:41:08,828 [ scc.config] DEBUG Found github.token
2025-08-25 00:41:08,828 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2025-08-25 00:41:08,828 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:08,871 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:08,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:08,873 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:08,913 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:08,918 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693a626610> has no local changes
2025-08-25 00:41:08,918 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:08,925 [ scc.git] DEBUG [detached HEAD 2736057] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:08,926 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:08,926 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:09,071 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:09,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2025-08-25 00:41:09,685 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:10,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None
2025-08-25 00:41:10,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:10,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-08-25 00:41:10,817 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:11,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:11,316 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:11,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:41:11,850 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:12,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-08-25 00:41:12,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:12,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:41:12,616 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-25 00:41:12,868 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:13,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None
2025-08-25 00:41:13,170 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:41:13,422 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:13,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-08-25 00:41:13,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:14,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:14,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:14,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:41:15,103 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:15,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-08-25 00:41:15,587 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:15,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:41:15,796 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-08-25 00:41:16,048 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:16,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None
2025-08-25 00:41:16,336 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:41:16,588 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:16,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-08-25 00:41:17,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:17,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:17,703 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:17,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:41:18,242 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:18,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-08-25 00:41:18,741 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:18,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:41:18,959 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-08-25 00:41:19,212 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:19,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None
2025-08-25 00:41:19,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:19,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2025-08-25 00:41:20,235 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:20,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2025-08-25 00:41:20,720 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:20,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2025-08-25 00:41:21,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:21,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2025-08-25 00:41:21,719 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:21,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2025-08-25 00:41:22,212 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:22,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2025-08-25 00:41:22,473 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:22,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-08-25 00:41:22,473 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:22,473 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:22,476 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:22,478 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:22,478 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:22,481 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:22,484 [ scc.git] DEBUG Already up to date.
2025-08-25 00:41:22,485 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head'
2025-08-25 00:41:22,798 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-08-25 00:41:22,799 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD
2025-08-25 00:41:22,803 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head'
2025-08-25 00:41:23,080 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-08-25 00:41:23,080 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD
2025-08-25 00:41:23,085 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head'
2025-08-25 00:41:23,362 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-08-25 00:41:23,363 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD
2025-08-25 00:41:23,367 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:23,367 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:23,367 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:23,369 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0'
2025-08-25 00:41:23,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:23,375 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0'
2025-08-25 00:41:23,383 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:41:23,386 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++----------------------------
2025-08-25 00:41:23,386 [ scc.git] DEBUG package.json | 2 +-
2025-08-25 00:41:23,387 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-)
2025-08-25 00:41:23,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:23,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:23,625 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80'
2025-08-25 00:41:23,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:23,631 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80'
2025-08-25 00:41:23,642 [ scc.git] DEBUG Auto-merging package-lock.json
2025-08-25 00:41:23,642 [ scc.git] DEBUG Auto-merging package.json
2025-08-25 00:41:23,643 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:41:23,646 [ scc.git] DEBUG package-lock.json | 18 ++++++++++--------
2025-08-25 00:41:23,646 [ scc.git] DEBUG package.json | 2 +-
2025-08-25 00:41:23,646 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-)
2025-08-25 00:41:23,877 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:24,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:24,099 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-08-25 00:41:24,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:24,104 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-08-25 00:41:24,113 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:41:24,116 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-08-25 00:41:24,116 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-25 00:41:24,351 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:24,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:24,551 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:24,593 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:24,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:24,595 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:24,636 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:24,640 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693a5ece90> has no local changes
2025-08-25 00:41:24,640 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:24,647 [ scc.git] DEBUG [detached HEAD 674e2b7] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:24,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:24,647 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:24,803 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:25,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2
2025-08-25 00:41:25,018 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:25,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-08-25 00:41:25,018 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:25,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:25,021 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:25,023 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:25,023 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:25,026 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:25,029 [ scc.git] DEBUG Already up to date.
2025-08-25 00:41:25,029 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:25,029 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:25,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:25,032 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:25,074 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:25,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:25,076 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:25,117 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:25,120 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693842ce50> has no local changes
2025-08-25 00:41:25,120 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:25,127 [ scc.git] DEBUG [detached HEAD 1794818] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:25,127 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:25,127 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:25,270 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:25,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2025-08-25 00:41:25,853 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:26,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None
2025-08-25 00:41:26,383 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:26,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None
2025-08-25 00:41:26,938 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:27,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-08-25 00:41:27,510 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:27,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:28,013 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:28,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:41:28,556 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:28,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-08-25 00:41:29,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:29,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:29,598 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:29,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-08-25 00:41:30,111 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:30,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None
2025-08-25 00:41:30,348 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions'
2025-08-25 00:41:30,600 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:30,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None
2025-08-25 00:41:30,906 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:30,906 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-08-25 00:41:30,906 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:30,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:30,909 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:30,911 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:30,911 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:30,914 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:30,917 [ scc.git] DEBUG Already up to date.
2025-08-25 00:41:30,917 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head'
2025-08-25 00:41:31,210 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2025-08-25 00:41:31,210 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD
2025-08-25 00:41:31,215 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:31,215 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:31,215 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:31,217 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3'
2025-08-25 00:41:31,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:31,223 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3'
2025-08-25 00:41:31,232 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:41:31,235 [ scc.git] DEBUG setup.py | 4 +-
2025-08-25 00:41:31,235 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 +
2025-08-25 00:41:31,235 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++--
2025-08-25 00:41:31,235 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-)
2025-08-25 00:41:31,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:31,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:31,438 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:31,481 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:31,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:31,483 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:31,524 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:31,528 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6938446ed0> has no local changes
2025-08-25 00:41:31,528 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:31,535 [ scc.git] DEBUG [detached HEAD 9b276a4] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:31,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:31,535 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:31,691 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:32,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2025-08-25 00:41:32,260 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:32,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2025-08-25 00:41:32,762 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:33,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2025-08-25 00:41:33,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:33,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-08-25 00:41:33,924 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:34,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:34,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:34,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-08-25 00:41:35,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:35,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:41:35,229 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2025-08-25 00:41:35,229 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:35,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-08-25 00:41:35,229 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:35,229 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:35,232 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:35,234 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:35,234 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:35,237 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:35,241 [ scc.git] DEBUG Already up to date.
2025-08-25 00:41:35,241 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-08-25 00:41:35,530 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-08-25 00:41:35,530 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-08-25 00:41:35,534 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:35,534 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:35,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:35,536 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-08-25 00:41:35,540 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:35,542 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-08-25 00:41:35,552 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2025-08-25 00:41:35,552 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2025-08-25 00:41:35,552 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2025-08-25 00:41:35,552 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2025-08-25 00:41:35,552 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2025-08-25 00:41:35,552 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2025-08-25 00:41:35,552 [ scc.git] DEBUG Auto-merging setup.py
2025-08-25 00:41:35,552 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2025-08-25 00:41:35,552 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:41:35,552 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:41:35,555 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e'
2025-08-25 00:41:35,560 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build
2025-08-25 00:41:35,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:35,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:35,770 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-08-25 00:41:35,773 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e'
2025-08-25 00:41:35,776 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/signup_settings.py
- setup.py
- omero_signup/views.py
- omero_signup/urls.py
--conflicts
2025-08-25 00:41:35,778 [ scc.config] DEBUG Found github.token
2025-08-25 00:41:35,778 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2025-08-25 00:41:35,778 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:35,823 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:35,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:35,825 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:35,867 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:35,871 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6938435250> has no local changes
2025-08-25 00:41:35,871 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:35,878 [ scc.git] DEBUG [detached HEAD 04552d9] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:35,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:35,878 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:36,022 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:36,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2025-08-25 00:41:36,649 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:36,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None
2025-08-25 00:41:37,192 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:37,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-08-25 00:41:37,805 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:38,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:38,360 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:38,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:41:38,880 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:39,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-08-25 00:41:39,473 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:39,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:41:39,689 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps'
2025-08-25 00:41:39,941 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:40,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None
2025-08-25 00:41:40,488 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:40,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None
2025-08-25 00:41:40,988 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:41,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None
2025-08-25 00:41:41,512 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:41,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:42,078 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:42,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:41:42,580 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:42,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None
2025-08-25 00:41:43,121 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:43,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None
2025-08-25 00:41:43,612 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:43,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2025-08-25 00:41:44,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:44,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2025-08-25 00:41:44,631 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:44,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-08-25 00:41:45,177 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:45,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:45,681 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:45,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-08-25 00:41:46,161 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:46,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:41:46,378 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-08-25 00:41:46,379 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:46,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-08-25 00:41:46,379 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:46,379 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:46,382 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:46,384 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:46,384 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:46,387 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:46,390 [ scc.git] DEBUG Already up to date.
2025-08-25 00:41:46,390 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2025-08-25 00:41:46,683 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-08-25 00:41:46,683 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2025-08-25 00:41:46,688 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head'
2025-08-25 00:41:46,987 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-08-25 00:41:46,987 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD
2025-08-25 00:41:46,992 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:46,992 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:46,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:46,995 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2025-08-25 00:41:46,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:47,001 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2025-08-25 00:41:47,014 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:41:47,018 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2025-08-25 00:41:47,018 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2025-08-25 00:41:47,018 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2025-08-25 00:41:47,019 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2025-08-25 00:41:47,019 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2025-08-25 00:41:47,019 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2025-08-25 00:41:47,019 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2025-08-25 00:41:47,019 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2025-08-25 00:41:47,019 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2025-08-25 00:41:47,021 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2025-08-25 00:41:47,021 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2025-08-25 00:41:47,021 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2025-08-25 00:41:47,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:47,211 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-08-25 00:41:47,215 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:47,218 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-08-25 00:41:47,228 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:41:47,231 [ scc.git] DEBUG docker | 1 +
2025-08-25 00:41:47,231 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2025-08-25 00:41:47,463 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:47,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:47,822 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:47,865 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:47,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:47,868 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:47,907 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:47,912 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693843be10> has no local changes
2025-08-25 00:41:47,912 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:47,920 [ scc.git] DEBUG [detached HEAD a61a2d6] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:47,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:47,920 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:48,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:48,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2025-08-25 00:41:48,300 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:48,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-08-25 00:41:48,301 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:48,301 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:48,303 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:48,306 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:48,306 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:48,308 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:48,312 [ scc.git] DEBUG Already up to date.
2025-08-25 00:41:48,312 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:48,312 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:48,312 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:48,314 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:48,355 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:48,356 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:48,358 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:48,399 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:48,402 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693841ed10> has no local changes
2025-08-25 00:41:48,402 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:48,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:48,409 [ scc.git] DEBUG [detached HEAD 285f3f2] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:48,409 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:48,553 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:48,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2
2025-08-25 00:41:48,788 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:48,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-08-25 00:41:48,788 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:48,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:48,791 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:48,793 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:48,793 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:48,796 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:48,805 [ scc.git] DEBUG Updating deab817..160d894
2025-08-25 00:41:49,041 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:49,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None
2025-08-25 00:41:49,504 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:49,504 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:49,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:49,507 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:49,550 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:49,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:49,552 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:49,593 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:49,596 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693a648590> has no local changes
2025-08-25 00:41:49,596 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:49,603 [ scc.git] DEBUG [detached HEAD 2fc5e3a] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:49,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:49,603 [ scc.git] INFO Overriding base-branch from master to main
2025-08-25 00:41:49,603 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:49,756 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:50,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2025-08-25 00:41:50,343 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:50,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None
2025-08-25 00:41:50,873 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:51,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None
2025-08-25 00:41:51,374 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:51,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None
2025-08-25 00:41:51,948 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:52,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:52,453 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:52,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:41:52,960 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:53,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2025-08-25 00:41:53,492 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:53,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2025-08-25 00:41:54,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:54,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2025-08-25 00:41:54,534 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:54,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-08-25 00:41:55,095 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:55,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:55,637 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:55,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-08-25 00:41:56,145 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:56,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:41:56,372 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-08-25 00:41:56,373 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:56,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-08-25 00:41:56,373 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:56,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:56,376 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2025-08-25 00:41:56,378 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:56,378 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2025-08-25 00:41:56,381 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2025-08-25 00:41:56,384 [ scc.git] DEBUG Already up to date.
2025-08-25 00:41:56,384 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2025-08-25 00:41:56,681 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-08-25 00:41:56,681 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2025-08-25 00:41:56,685 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:56,685 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:56,685 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:56,687 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-08-25 00:41:56,690 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:56,692 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-08-25 00:41:56,701 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2025-08-25 00:41:56,701 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2025-08-25 00:41:56,702 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:41:56,702 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:41:56,705 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-08-25 00:41:56,709 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build
2025-08-25 00:41:56,712 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:56,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:56,891 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-08-25 00:41:56,894 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-08-25 00:41:56,897 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2025-08-25 00:41:56,900 [ scc.config] DEBUG Found github.token
2025-08-25 00:41:56,900 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2025-08-25 00:41:56,900 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:56,941 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:56,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:56,944 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:56,984 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:56,988 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693a596490> has no local changes
2025-08-25 00:41:56,988 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:56,994 [ scc.git] DEBUG [detached HEAD 9190387] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:56,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:56,995 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:57,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:57,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2025-08-25 00:41:57,376 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:57,376 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-08-25 00:41:57,376 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:57,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:57,378 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:57,381 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:57,381 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:57,384 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:57,387 [ scc.git] DEBUG Already up to date.
2025-08-25 00:41:57,387 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:57,387 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:57,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:57,389 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:57,430 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:57,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:57,432 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:57,472 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:57,476 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f69384860d0> has no local changes
2025-08-25 00:41:57,476 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:57,482 [ scc.git] DEBUG [detached HEAD cf58ac7] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:57,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:57,483 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:57,628 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:57,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2025-08-25 00:41:57,881 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:57,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-08-25 00:41:57,881 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:57,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:57,883 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:57,886 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:57,886 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:57,889 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:57,892 [ scc.git] DEBUG Already up to date.
2025-08-25 00:41:57,892 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:57,892 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:57,892 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:57,894 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:57,933 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:57,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:57,936 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:57,973 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:57,977 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693a808610> has no local changes
2025-08-25 00:41:57,977 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:57,983 [ scc.git] DEBUG [detached HEAD 7a34113] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:57,984 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:57,984 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:58,133 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:58,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2025-08-25 00:41:58,658 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:58,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2025-08-25 00:41:59,181 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:59,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2025-08-25 00:41:59,720 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:00,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-08-25 00:42:00,294 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:00,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:42:00,788 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:01,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-08-25 00:42:01,405 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:01,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:42:01,626 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2025-08-25 00:42:01,626 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:42:01,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-08-25 00:42:01,626 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:42:01,626 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:42:01,629 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:42:01,631 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:42:01,631 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:42:01,634 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:42:01,637 [ scc.git] DEBUG Already up to date.
2025-08-25 00:42:01,637 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2025-08-25 00:42:01,922 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2025-08-25 00:42:01,922 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2025-08-25 00:42:01,926 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:42:01,926 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:42:01,926 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:42:01,928 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-08-25 00:42:01,931 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:42:01,933 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-08-25 00:42:01,943 [ scc.git] DEBUG Auto-merging Dockerfile
2025-08-25 00:42:01,943 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2025-08-25 00:42:01,943 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:42:01,944 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:42:01,947 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-08-25 00:42:01,952 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-08-25 00:42:01,954 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:02,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:02,150 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-08-25 00:42:02,153 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-08-25 00:42:02,156 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2025-08-25 00:42:02,158 [ scc.config] DEBUG Found github.token
2025-08-25 00:42:02,158 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2025-08-25 00:42:02,158 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:42:02,201 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:42:02,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:42:02,203 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:42:02,246 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:42:02,250 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693ce57110> has no local changes
2025-08-25 00:42:02,250 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:42:02,257 [ scc.git] DEBUG [detached HEAD 74c15e3] merge master -Dorg -Ssuccess-only
2025-08-25 00:42:02,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:02,257 [ scc.git] INFO Overriding base-branch from master to develop
2025-08-25 00:42:02,257 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:42:02,402 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:02,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-08-25 00:42:02,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:03,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-08-25 00:42:03,515 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:03,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-08-25 00:42:04,011 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:04,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-08-25 00:42:04,478 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:04,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:42:05,193 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:05,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:42:05,701 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:05,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-08-25 00:42:06,201 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:06,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:42:06,423 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-08-25 00:42:06,675 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:06,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-08-25 00:42:07,224 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:07,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-08-25 00:42:07,731 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:08,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-08-25 00:42:08,272 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:08,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:42:08,775 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:09,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-08-25 00:42:09,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:09,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:42:09,544 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-08-25 00:42:09,795 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:10,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-08-25 00:42:10,293 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:10,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-08-25 00:42:10,809 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:11,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-08-25 00:42:11,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:11,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-08-25 00:42:11,570 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:42:11,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-08-25 00:42:11,570 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:42:11,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:42:11,573 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-08-25 00:42:11,575 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:42:11,576 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-08-25 00:42:11,579 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-08-25 00:42:11,590 [ scc.git] DEBUG Updating 4b4c755..573db34
2025-08-25 00:42:11,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:12,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None
2025-08-25 00:42:12,506 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:12,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None
2025-08-25 00:42:12,997 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-08-25 00:42:13,294 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-08-25 00:42:13,294 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-08-25 00:42:13,299 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-08-25 00:42:13,594 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-08-25 00:42:13,594 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-08-25 00:42:13,599 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:42:13,599 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:42:13,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:42:13,602 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-25 00:42:13,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:42:13,610 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-25 00:42:13,621 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-08-25 00:42:13,622 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:42:13,622 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:42:13,625 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150'
2025-08-25 00:42:13,629 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0
2025-08-25 00:42:13,631 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:13,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:13,832 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-25 00:42:13,838 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150'
2025-08-25 00:42:13,842 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-08-25 00:42:13,844 [ scc.config] DEBUG Found github.token
2025-08-25 00:42:13,844 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-08-25 00:42:13,845 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-08-25 00:42:13,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:42:13,852 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-08-25 00:42:13,862 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:42:13,866 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-08-25 00:42:13,866 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-08-25 00:42:14,084 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:14,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:14,280 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:42:14,321 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:42:14,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:42:14,324 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:42:14,364 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:42:14,368 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6938446890> has no local changes
2025-08-25 00:42:14,368 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..573db34
Previously merged:
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:42:14,375 [ scc.git] DEBUG [detached HEAD c09466d] merge master -Dorg -Ssuccess-only
2025-08-25 00:42:14,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:14,375 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:42:14,456 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2025-08-25 00:42:14,532 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:14,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:14,722 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2025-08-25 00:42:14,724 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2025-08-25 00:42:14,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:15,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:15,179 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2025-08-25 00:42:15,181 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2025-08-25 00:42:15,427 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:15,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:15,630 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2025-08-25 00:42:15,632 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2025-08-25 00:42:15,877 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:16,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:16,063 [ scc.config] DEBUG Found submodule.omero-figure.url
2025-08-25 00:42:16,309 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:16,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:16,523 [ scc.config] DEBUG Found submodule.omero-figure.branch
2025-08-25 00:42:16,525 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2025-08-25 00:42:16,770 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:16,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:16,965 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2025-08-25 00:42:16,967 [ scc.config] DEBUG Found submodule.omero-gallery.url
2025-08-25 00:42:17,212 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:17,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:17,432 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2025-08-25 00:42:17,434 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2025-08-25 00:42:17,680 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:17,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:17,880 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2025-08-25 00:42:17,881 [ scc.config] DEBUG Found submodule.omero-mapr.url
2025-08-25 00:42:18,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:18,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:18,340 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2025-08-25 00:42:18,342 [ scc.config] DEBUG Found submodule.omero-metadata.url
2025-08-25 00:42:18,587 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:18,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:18,782 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2025-08-25 00:42:18,784 [ scc.config] DEBUG Found submodule.omero-parade.url
2025-08-25 00:42:19,029 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:19,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:19,225 [ scc.config] DEBUG Found submodule.omero-parade.branch
2025-08-25 00:42:19,227 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2025-08-25 00:42:19,472 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:19,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:19,685 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2025-08-25 00:42:19,687 [ scc.config] DEBUG Found submodule.omero-rois.url
2025-08-25 00:42:19,932 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:20,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:20,172 [ scc.config] DEBUG Found submodule.omero-signup.url
2025-08-25 00:42:20,417 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:20,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:20,603 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2025-08-25 00:42:20,848 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:21,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:21,059 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2025-08-25 00:42:21,061 [ scc.config] DEBUG Found submodule.omero-upload.url
2025-08-25 00:42:21,306 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:21,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:21,498 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2025-08-25 00:42:21,744 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:21,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:21,941 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2025-08-25 00:42:22,187 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:22,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:22,407 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2025-08-25 00:42:22,409 [ scc.config] DEBUG Found submodule.omero-weberror.url
2025-08-25 00:42:22,654 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:22,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:22,879 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2025-08-25 00:42:22,881 [ scc.config] DEBUG Found submodule.omero-webtest.url
2025-08-25 00:42:23,126 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:23,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:23,336 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2025-08-25 00:42:23,338 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2025-08-25 00:42:23,583 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:23,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:23,782 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2025-08-25 00:42:23,784 [ scc.config] DEBUG Found submodule.scripts.url
2025-08-25 00:42:24,029 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:24,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:24,238 [ scc.config] DEBUG Found submodule.scripts.branch
2025-08-25 00:42:24,238 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:42:24,331 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693c462210> has local changes
2025-08-25 00:42:24,331 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 180 will-moore 'Register command' (status: failure)
- PR 174 will-moore 'Skip wells' (stage: draft)
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..f7eea7c
Previously merged:
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
Repository: ome/omero-figure
Excluded PRs:
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..d2c6f5bc
Previously merged:
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 612 will-moore 'Script version'
- PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
Conflicting PRs (not included):
- PR 616 Rdornier 'Fix labels around border'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 637 Rdornier 'Fix scalebar position'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..bb94cf8
Previously merged:
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-prometheus-tools
Already up to date.
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Repository: ome/omero-upload
Already up to date.
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Repository: openmicroscopy/omero-webtest
Already up to date.
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..573db34
Previously merged:
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:42:24,345 [ scc.git] DEBUG [detached HEAD 67b465e] merge master -Dorg -Ssuccess-only
2025-08-25 00:42:24,345 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2025-08-25 00:42:24,345 [ scc.merge] INFO Repository: ome/omero-plugins
2025-08-25 00:42:24,345 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,345 [ scc.merge] INFO
2025-08-25 00:42:24,346 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-08-25 00:42:24,346 [ scc.merge] INFO
2025-08-25 00:42:24,346 [ scc.merge] INFO Repository: ome/minimal-omero-client
2025-08-25 00:42:24,346 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,346 [ scc.merge] INFO
2025-08-25 00:42:24,346 [ scc.merge] INFO
2025-08-25 00:42:24,346 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2025-08-25 00:42:24,346 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2025-08-25 00:42:24,346 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,346 [ scc.merge] INFO
2025-08-25 00:42:24,346 [ scc.merge] INFO
2025-08-25 00:42:24,346 [ scc.merge] INFO Repository: ome/omero-cli-render
2025-08-25 00:42:24,346 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2025-08-25 00:42:24,346 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,346 [ scc.merge] INFO
2025-08-25 00:42:24,346 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands'
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names'
2025-08-25 00:42:24,346 [ scc.merge] INFO
2025-08-25 00:42:24,346 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2025-08-25 00:42:24,346 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 180 will-moore 'Register command' (status: failure)
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' (stage: draft)
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure)
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft)
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft)
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft)
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
2025-08-25 00:42:24,346 [ scc.merge] INFO Updating 11d3587..f7eea7c
2025-08-25 00:42:24,346 [ scc.merge] INFO Previously merged:
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-25 00:42:24,347 [ scc.merge] INFO
2025-08-25 00:42:24,347 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-08-25 00:42:24,347 [ scc.merge] INFO
2025-08-25 00:42:24,347 [ scc.merge] INFO Repository: ome/omero-figure
2025-08-25 00:42:24,347 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft)
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2025-08-25 00:42:24,347 [ scc.merge] INFO Updating 9cc36cde..d2c6f5bc
2025-08-25 00:42:24,347 [ scc.merge] INFO Previously merged:
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-25 00:42:24,347 [ scc.merge] INFO
2025-08-25 00:42:24,347 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 612 will-moore 'Script version'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
2025-08-25 00:42:24,347 [ scc.merge] INFO
2025-08-25 00:42:24,347 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position'
2025-08-25 00:42:24,347 [ scc.merge] INFO
2025-08-25 00:42:24,347 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2025-08-25 00:42:24,347 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,347 [ scc.merge] INFO
2025-08-25 00:42:24,347 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2025-08-25 00:42:24,347 [ scc.merge] INFO
2025-08-25 00:42:24,347 [ scc.merge] INFO Repository: ome/omero-gallery
2025-08-25 00:42:24,348 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,348 [ scc.merge] INFO
2025-08-25 00:42:24,348 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-08-25 00:42:24,348 [ scc.merge] INFO
2025-08-25 00:42:24,348 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-08-25 00:42:24,348 [ scc.merge] INFO
2025-08-25 00:42:24,348 [ scc.merge] INFO Repository: ome/omero-iviewer
2025-08-25 00:42:24,348 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure)
2025-08-25 00:42:24,348 [ scc.merge] INFO Updating 7a798ce..bb94cf8
2025-08-25 00:42:24,348 [ scc.merge] INFO Previously merged:
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-25 00:42:24,348 [ scc.merge] INFO
2025-08-25 00:42:24,348 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-08-25 00:42:24,348 [ scc.merge] INFO
2025-08-25 00:42:24,348 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-08-25 00:42:24,348 [ scc.merge] INFO
2025-08-25 00:42:24,348 [ scc.merge] INFO Repository: ome/omero-mapr
2025-08-25 00:42:24,348 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2025-08-25 00:42:24,348 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,348 [ scc.merge] INFO
2025-08-25 00:42:24,348 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Repository: ome/omero-metadata
2025-08-25 00:42:24,349 [ scc.merge] INFO Updating 3cd120c..55060a2
2025-08-25 00:42:24,349 [ scc.merge] INFO Previously merged:
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Repository: ome/omero-parade
2025-08-25 00:42:24,349 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2025-08-25 00:42:24,349 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2025-08-25 00:42:24,349 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Repository: ome/omero-rois
2025-08-25 00:42:24,349 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-08-25 00:42:24,349 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions'
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Repository: ome/omero-signup
2025-08-25 00:42:24,349 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2025-08-25 00:42:24,350 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles)
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
2025-08-25 00:42:24,350 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps'
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO Repository: ome/omero-upload
2025-08-25 00:42:24,350 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2025-08-25 00:42:24,350 [ scc.merge] INFO Updating deab817..160d894
2025-08-25 00:42:24,350 [ scc.merge] INFO Previously merged:
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 20 jburel 'Build'
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO Repository: ome/omero-web-zarr
2025-08-25 00:42:24,350 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure)
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2025-08-25 00:42:24,350 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2025-08-25 00:42:24,350 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2025-08-25 00:42:24,350 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2025-08-25 00:42:24,350 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,351 [ scc.merge] INFO Repository: ome/scripts
2025-08-25 00:42:24,351 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,351 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-08-25 00:42:24,351 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-08-25 00:42:24,351 [ scc.merge] INFO Updating 4b4c755..573db34
2025-08-25 00:42:24,351 [ scc.merge] INFO Previously merged:
2025-08-25 00:42:24,351 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes'
2025-08-25 00:42:24,351 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests'
2025-08-25 00:42:24,351 [ scc.merge] INFO
2025-08-25 00:42:24,351 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,351 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-08-25 00:42:24,351 [ scc.merge] INFO
2025-08-25 00:42:24,351 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-25 00:42:24,351 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-08-25 00:42:24,351 [ scc.merge] INFO
2025-08-25 00:42:24,351 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-25 00:42:24,351 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,353 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-08-25 00:42:24,353 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-08-25 00:42:24,356 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-08-25 00:42:24,358 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-08-25 00:42:24,360 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-08-25 00:42:24,363 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-08-25 00:42:24,365 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,367 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-08-25 00:42:24,368 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-08-25 00:42:24,370 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,372 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,372 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-08-25 00:42:24,372 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,374 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-08-25 00:42:24,375 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,377 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,377 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-08-25 00:42:24,377 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-08-25 00:42:24,379 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,381 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,382 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-08-25 00:42:24,382 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-08-25 00:42:24,384 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-08-25 00:42:24,386 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,388 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,388 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-08-25 00:42:24,389 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-08-25 00:42:24,391 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-08-25 00:42:24,393 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-08-25 00:42:24,395 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-08-25 00:42:24,398 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-08-25 00:42:24,400 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-08-25 00:42:24,402 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,405 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD f1a45fb] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 4777ef8
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from ce6e13c
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 11d3587
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 9cc36cde
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from 3b6c05a
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 2a621da
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from 7a798ce
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 0a557da
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from 3cd120c
nothing to commit, working tree clean
Entering 'omero-parade'
HEAD detached from fb5ae86
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from eb47378
nothing to commit, working tree clean
Entering 'omero-rois'
HEAD detached from bdfeb5e
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from be76813
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from cda3ec6
nothing to commit, working tree clean
Entering 'omero-upload'
HEAD detached from 100f6ae
nothing to commit, working tree clean
Entering 'omero-virtual-microscope'
HEAD detached from deab817
nothing to commit, working tree clean
Entering 'omero-web-zarr'
HEAD detached from 8f3c313
nothing to commit, working tree clean
Entering 'omero-weberror'
HEAD detached from 70b01ed
nothing to commit, working tree clean
Entering 'omero-webtest'
HEAD detached from 5bfef29
nothing to commit, working tree clean
Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
nothing to commit, working tree clean
Entering 'scripts'
HEAD detached from 4b4c755
nothing to commit, working tree clean
[detached HEAD 38e2c0f] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-08-25 00:43:14,655 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-08-25 00:43:24,743 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-08-25 00:43:27,382 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-08-25 00:43:32,505 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-08-25 00:44:12,995 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS
![[Jenkins]](/jenkins/static/9161e9ff/images/svgs/logo.svg){kind=logo}
