Console Output
+ export BASE_REPO=omero-insight.git
+ BASE_REPO=omero-insight.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-insight-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-insight-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-01-19 00:58:00,467 [ scc.config] DEBUG Found github.token
2025-01-19 00:58:00,470 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-01-19 00:58:00,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-01-19 00:58:01,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-01-19 00:58:01,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-01-19 00:58:01,424 [ scc.gh] DEBUG 3718 remaining from 5000 (Reset at 01:01
2025-01-19 00:58:01,425 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-01-19 00:58:01,429 [ scc.git] DEBUG Check current status
2025-01-19 00:58:01,429 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-01-19 00:58:01,433 [ scc.git] DEBUG 5750f8f0e Merge pull request #448 from pwalczysko/fix-gha
2025-01-19 00:58:01,434 [ scc.git] DEBUG Calling 'git submodule status'
2025-01-19 00:58:01,481 [ scc.config] DEBUG Found remote.origin.url
2025-01-19 00:58:01,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None
2025-01-19 00:58:02,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-01-19 00:58:02,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-01-19 00:58:03,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-01-19 00:58:03,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-01-19 00:58:03,579 [ scc.git] DEBUG Resetting...
2025-01-19 00:58:03,579 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-01-19 00:58:03,596 [ scc.git] DEBUG HEAD is now at 5750f8f0e Merge pull request #448 from pwalczysko/fix-gha
2025-01-19 00:58:03,596 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-01-19 00:58:03,638 [ scc.git] DEBUG Check current status
2025-01-19 00:58:03,639 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-01-19 00:58:03,642 [ scc.git] DEBUG 5750f8f0e Merge pull request #448 from pwalczysko/fix-gha
2025-01-19 00:58:03,643 [ scc.git] DEBUG Calling 'git submodule status'
2025-01-19 00:58:03,681 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-01-19 00:58:03,681 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-01-19 00:58:03,681 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-01-19 00:58:03,682 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-01-19 00:58:03,682 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-01-19 00:58:03,682 [ scc.repo] DEBUG ## PRs found:
2025-01-19 00:58:04,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None
2025-01-19 00:58:04,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443 HTTP/1.1" 200 None
2025-01-19 00:58:05,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443/comments HTTP/1.1" 200 None
2025-01-19 00:58:05,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333 HTTP/1.1" 200 None
2025-01-19 00:58:05,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333/comments HTTP/1.1" 200 None
2025-01-19 00:58:05,896 [ scc.repo] DEBUG - PR 333 jburel 'drop compatibility to test new Jenkins'
2025-01-19 00:58:06,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310 HTTP/1.1" 200 None
2025-01-19 00:58:06,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310/comments HTTP/1.1" 200 None
2025-01-19 00:58:06,862 [ scc.repo] DEBUG ## Branches found:
2025-01-19 00:58:06,862 [ scc.git] DEBUG Get sha1 of %s
2025-01-19 00:58:06,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-01-19 00:58:06,867 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-01-19 00:58:06,871 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-01-19 00:58:06,871 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-01-19 00:58:06,875 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-01-19 00:58:06,880 [ scc.git] DEBUG Already up to date.
2025-01-19 00:58:06,880 [ scc.git] DEBUG Calling 'git fetch origin pull/333/head'
2025-01-19 00:58:07,328 [ scc.git] DEBUG From https://github.com/ome/omero-insight
2025-01-19 00:58:07,329 [ scc.git] DEBUG * branch refs/pull/333/head -> FETCH_HEAD
2025-01-19 00:58:07,333 [ scc.git] DEBUG ## Unique users: []
2025-01-19 00:58:07,333 [ scc.git] DEBUG Get sha1 of %s
2025-01-19 00:58:07,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-01-19 00:58:07,337 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b66e93349e2ddb5c1908f922c7c63a46722bd48e'
2025-01-19 00:58:07,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-01-19 00:58:07,346 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 333 (drop compatibility to test new Jenkins) b66e93349e2ddb5c1908f922c7c63a46722bd48e'
2025-01-19 00:58:07,392 [ scc.git] DEBUG Auto-merging build.gradle
2025-01-19 00:58:07,395 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-01-19 00:58:07,398 [ scc.git] DEBUG build.gradle | 8 ++++----
2025-01-19 00:58:07,398 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 4 deletions(-)
2025-01-19 00:58:07,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-01-19 00:58:07,540 [ scc.git] DEBUG Calling 'git submodule update'
2025-01-19 00:58:07,581 [ scc.git] DEBUG Get sha1 of %s
2025-01-19 00:58:07,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-01-19 00:58:07,585 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-01-19 00:58:07,670 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f61ee337370> has no local changes
2025-01-19 00:58:07,670 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-insight
Excluded PRs:
- PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
- PR 377 sukunis 'Fix ontology loads' (exclude comment)
- PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
Already up to date.
Merged PRs:
- PR 333 jburel 'drop compatibility to test new Jenkins'
Generated by OMERO-insight-push#289 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/289/)'
2025-01-19 00:58:07,685 [ scc.git] DEBUG [detached HEAD 03d41ca49] merge master -Dorg -Snone
2025-01-19 00:58:07,686 [ scc.merge] INFO Repository: ome/omero-insight
2025-01-19 00:58:07,686 [ scc.merge] INFO Excluded PRs:
2025-01-19 00:58:07,686 [ scc.merge] INFO - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
2025-01-19 00:58:07,686 [ scc.merge] INFO - PR 377 sukunis 'Fix ontology loads' (exclude comment)
2025-01-19 00:58:07,686 [ scc.merge] INFO - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
2025-01-19 00:58:07,686 [ scc.merge] INFO Already up to date.
2025-01-19 00:58:07,686 [ scc.merge] INFO
2025-01-19 00:58:07,686 [ scc.merge] INFO Merged PRs:
2025-01-19 00:58:07,686 [ scc.merge] INFO - PR 333 jburel 'drop compatibility to test new Jenkins'
2025-01-19 00:58:07,686 [ scc.merge] INFO
2025-01-19 00:58:07,686 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-01-19 00:58:07,686 [ scc.git] DEBUG Calling 'git remote'
Merge all submodules2025-01-19 00:58:08,145 [ scc.config] DEBUG Found github.token
2025-01-19 00:58:08,148 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-01-19 00:58:08,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-01-19 00:58:08,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-01-19 00:58:09,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-01-19 00:58:09,102 [ scc.gh] DEBUG 3685 remaining from 5000 (Reset at 01:01
2025-01-19 00:58:09,102 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-01-19 00:58:09,106 [ scc.git] DEBUG Check current status
2025-01-19 00:58:09,107 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-01-19 00:58:09,110 [ scc.git] DEBUG 03d41ca49 merge master -Dorg -Snone
2025-01-19 00:58:09,111 [ scc.git] DEBUG Calling 'git submodule status'
2025-01-19 00:58:09,157 [ scc.config] DEBUG Found remote.origin.url
2025-01-19 00:58:09,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None
2025-01-19 00:58:09,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-01-19 00:58:10,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-01-19 00:58:10,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-01-19 00:58:11,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-01-19 00:58:11,189 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-01-19 00:58:11,230 [ scc.git] DEBUG Resetting...
2025-01-19 00:58:11,230 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-01-19 00:58:11,247 [ scc.git] DEBUG HEAD is now at 03d41ca49 merge master -Dorg -Snone
2025-01-19 00:58:11,248 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-01-19 00:58:11,291 [ scc.git] DEBUG Check current status
2025-01-19 00:58:11,291 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-01-19 00:58:11,296 [ scc.git] DEBUG 03d41ca49 merge master -Dorg -Snone
2025-01-19 00:58:11,296 [ scc.git] DEBUG Calling 'git submodule status'
2025-01-19 00:58:11,337 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-01-19 00:58:11,338 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-01-19 00:58:11,338 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-01-19 00:58:11,338 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-01-19 00:58:11,338 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-01-19 00:58:11,338 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-01-19 00:58:11,338 [ scc.repo] DEBUG ## PRs found:
2025-01-19 00:58:11,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None
2025-01-19 00:58:12,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443 HTTP/1.1" 200 None
2025-01-19 00:58:12,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443/comments HTTP/1.1" 200 None
2025-01-19 00:58:13,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333 HTTP/1.1" 200 None
2025-01-19 00:58:13,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333/comments HTTP/1.1" 200 None
2025-01-19 00:58:14,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/b66e93349e2ddb5c1908f922c7c63a46722bd48e HTTP/1.1" 200 None
2025-01-19 00:58:14,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/b66e93349e2ddb5c1908f922c7c63a46722bd48e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-01-19 00:58:15,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/b66e93349e2ddb5c1908f922c7c63a46722bd48e HTTP/1.1" 200 None
2025-01-19 00:58:15,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/b66e93349e2ddb5c1908f922c7c63a46722bd48e?per_page=1 HTTP/1.1" 200 2
2025-01-19 00:58:15,893 [ scc.repo] DEBUG - PR 333 jburel 'drop compatibility to test new Jenkins'
2025-01-19 00:58:16,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310 HTTP/1.1" 200 None
2025-01-19 00:58:16,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310/comments HTTP/1.1" 200 None
2025-01-19 00:58:16,848 [ scc.repo] DEBUG ## Branches found:
2025-01-19 00:58:16,848 [ scc.git] DEBUG Get sha1 of %s
2025-01-19 00:58:16,848 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-01-19 00:58:16,852 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-01-19 00:58:16,856 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-01-19 00:58:16,856 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-01-19 00:58:16,861 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-01-19 00:58:16,868 [ scc.git] DEBUG Already up to date.
2025-01-19 00:58:16,868 [ scc.git] DEBUG Calling 'git fetch origin pull/333/head'
2025-01-19 00:58:17,193 [ scc.git] DEBUG From https://github.com/ome/omero-insight
2025-01-19 00:58:17,193 [ scc.git] DEBUG * branch refs/pull/333/head -> FETCH_HEAD
2025-01-19 00:58:17,198 [ scc.git] DEBUG ## Unique users: []
2025-01-19 00:58:17,198 [ scc.git] DEBUG Get sha1 of %s
2025-01-19 00:58:17,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-01-19 00:58:17,203 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b66e93349e2ddb5c1908f922c7c63a46722bd48e'
2025-01-19 00:58:17,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-01-19 00:58:17,214 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 333 (drop compatibility to test new Jenkins) b66e93349e2ddb5c1908f922c7c63a46722bd48e'
2025-01-19 00:58:17,221 [ scc.git] DEBUG Already up to date.
2025-01-19 00:58:17,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-01-19 00:58:17,353 [ scc.git] DEBUG Calling 'git submodule update'
2025-01-19 00:58:17,394 [ scc.git] DEBUG Get sha1 of %s
2025-01-19 00:58:17,394 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-01-19 00:58:17,398 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-01-19 00:58:17,438 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-01-19 00:58:17,448 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f761d7e5370> has no local changes
2025-01-19 00:58:17,448 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-insight
Excluded PRs:
- PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
- PR 377 sukunis 'Fix ontology loads' (exclude comment)
- PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
Already up to date.
Merged PRs:
- PR 333 jburel 'drop compatibility to test new Jenkins'
Generated by OMERO-insight-push#289 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/289/)'
2025-01-19 00:58:17,460 [ scc.git] DEBUG [detached HEAD 8a68cfd3d] merge master -Dorg -Ssuccess-only
2025-01-19 00:58:17,461 [ scc.merge] INFO Repository: ome/omero-insight
2025-01-19 00:58:17,461 [ scc.merge] INFO Excluded PRs:
2025-01-19 00:58:17,461 [ scc.merge] INFO - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
2025-01-19 00:58:17,461 [ scc.merge] INFO - PR 377 sukunis 'Fix ontology loads' (exclude comment)
2025-01-19 00:58:17,461 [ scc.merge] INFO - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
2025-01-19 00:58:17,461 [ scc.merge] INFO Already up to date.
2025-01-19 00:58:17,461 [ scc.merge] INFO
2025-01-19 00:58:17,461 [ scc.merge] INFO Merged PRs:
2025-01-19 00:58:17,461 [ scc.merge] INFO - PR 333 jburel 'drop compatibility to test new Jenkins'
2025-01-19 00:58:17,461 [ scc.merge] INFO
2025-01-19 00:58:17,461 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-01-19 00:58:17,461 [ scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.9.3 to 5.10.1-SNAPSHOT
Commit all component version changes
[detached HEAD c285dc254] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
2025-01-19 00:58:23,436 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-insight/tree/merge_ci