Console Output
Skipping 114 KB..
Full Log"GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-29 00:44:00,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2024-11-29 00:44:00,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:44:00,539 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2024-11-29 00:44:01,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None
2024-11-29 00:44:01,014 [ scc.repo] DEBUG # ... Include label: dependencies
2024-11-29 00:44:01,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2024-11-29 00:44:02,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:44:02,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-29 00:44:03,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2024-11-29 00:44:03,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:44:03,480 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents'
2024-11-29 00:44:04,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None
2024-11-29 00:44:04,047 [ scc.repo] DEBUG # ... Include label: dependencies
2024-11-29 00:44:04,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2024-11-29 00:44:05,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:44:05,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-29 00:44:06,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2024-11-29 00:44:06,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:44:06,520 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2024-11-29 00:44:06,520 [ scc.repo] DEBUG ## Branches found:
2024-11-29 00:44:06,520 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-11-29 00:44:06,520 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:06,520 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:06,526 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-29 00:44:06,532 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-29 00:44:06,532 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-29 00:44:06,539 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-29 00:44:06,545 [ scc.git] DEBUG Already up to date.
2024-11-29 00:44:06,545 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head'
2024-11-29 00:44:06,913 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-11-29 00:44:06,913 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD
2024-11-29 00:44:06,918 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head'
2024-11-29 00:44:07,232 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-11-29 00:44:07,232 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD
2024-11-29 00:44:07,236 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head'
2024-11-29 00:44:07,550 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-11-29 00:44:07,550 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD
2024-11-29 00:44:07,555 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head'
2024-11-29 00:44:07,859 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-11-29 00:44:07,860 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD
2024-11-29 00:44:07,864 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head'
2024-11-29 00:44:08,148 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-11-29 00:44:08,148 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD
2024-11-29 00:44:08,155 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head'
2024-11-29 00:44:08,446 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-11-29 00:44:08,446 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD
2024-11-29 00:44:08,451 [ scc.git] DEBUG ## Unique users: []
2024-11-29 00:44:08,452 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:08,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:08,458 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2024-11-29 00:44:08,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:08,468 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2024-11-29 00:44:08,479 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-29 00:44:08,484 [ scc.git] DEBUG package-lock.json | 12 ++++++------
2024-11-29 00:44:08,484 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-)
2024-11-29 00:44:08,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:44:08,634 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b'
2024-11-29 00:44:08,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:08,650 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b'
2024-11-29 00:44:08,671 [ scc.git] DEBUG Auto-merging package-lock.json
2024-11-29 00:44:08,672 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-29 00:44:08,677 [ scc.git] DEBUG package-lock.json | 625 +++---------------------------------------------------
2024-11-29 00:44:08,678 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-)
2024-11-29 00:44:09,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:44:09,055 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2024-11-29 00:44:09,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:09,066 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2024-11-29 00:44:09,084 [ scc.git] DEBUG Auto-merging package-lock.json
2024-11-29 00:44:09,084 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2024-11-29 00:44:09,084 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-29 00:44:09,085 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-29 00:44:09,092 [ scc.git] DEBUG Calling 'git reset --hard dd4663f35a1706856ad4804950053b96a50363d0'
2024-11-29 00:44:09,100 [ scc.git] DEBUG HEAD is now at dd4663f merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents)
2024-11-29 00:44:09,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:44:09,441 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2024-11-29 00:44:09,447 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2024-11-29 00:44:09,452 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#262](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
--conflicts
2024-11-29 00:44:09,458 [ scc.config] DEBUG Found github.token
2024-11-29 00:44:09,458 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts.
2024-11-29 00:44:09,459 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2024-11-29 00:44:09,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:09,469 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2024-11-29 00:44:09,487 [ scc.git] DEBUG Auto-merging package-lock.json
2024-11-29 00:44:09,487 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-29 00:44:09,492 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++-----
2024-11-29 00:44:09,492 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-)
2024-11-29 00:44:09,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:44:09,835 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c'
2024-11-29 00:44:09,841 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:09,846 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c'
2024-11-29 00:44:09,865 [ scc.git] DEBUG Auto-merging package-lock.json
2024-11-29 00:44:09,866 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-29 00:44:09,871 [ scc.git] DEBUG package-lock.json | 6 +++---
2024-11-29 00:44:09,871 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-)
2024-11-29 00:44:10,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:44:10,227 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2024-11-29 00:44:10,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:10,240 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2024-11-29 00:44:10,259 [ scc.git] DEBUG Auto-merging package-lock.json
2024-11-29 00:44:10,260 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2024-11-29 00:44:10,260 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-29 00:44:10,260 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-29 00:44:10,266 [ scc.git] DEBUG Calling 'git reset --hard 57bcb17ac22ded109507fff352e6b306577cc9e0'
2024-11-29 00:44:10,274 [ scc.git] DEBUG HEAD is now at 57bcb17 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2024-11-29 00:44:10,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:44:10,617 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2024-11-29 00:44:10,624 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2024-11-29 00:44:10,631 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#262](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
--conflicts
2024-11-29 00:44:10,637 [ scc.config] DEBUG Found github.token
2024-11-29 00:44:10,638 [ scc.git] DEBUG Adding comment to issue #118.
2024-11-29 00:44:11,464 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 201 2394
2024-11-29 00:44:11,465 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-29 00:44:11,508 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:11,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:11,514 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-29 00:44:11,558 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-29 00:44:11,566 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66fc0b0f40> has no local changes
2024-11-29 00:44:11,566 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Generated by OMERO-plugins-push#262 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/)'
2024-11-29 00:44:11,576 [ scc.git] DEBUG [detached HEAD d05f57c] merge master -Dorg -Ssuccess-only
2024-11-29 00:44:11,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:44:11,576 [ scc.repo] DEBUG ## PRs found:
2024-11-29 00:44:12,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2024-11-29 00:44:12,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None
2024-11-29 00:44:12,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None
2024-11-29 00:44:13,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2024-11-29 00:44:13,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2024-11-29 00:44:14,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-11-29 00:44:14,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:44:15,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-29 00:44:15,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-11-29 00:44:16,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:44:16,305 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2024-11-29 00:44:16,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2024-11-29 00:44:17,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2024-11-29 00:44:17,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-11-29 00:44:18,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:44:18,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-29 00:44:19,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-11-29 00:44:19,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:44:19,719 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2024-11-29 00:44:20,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2024-11-29 00:44:20,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2024-11-29 00:44:21,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-11-29 00:44:21,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:44:22,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-11-29 00:44:22,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:44:22,548 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2024-11-29 00:44:22,548 [ scc.repo] DEBUG ## Branches found:
2024-11-29 00:44:22,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-11-29 00:44:22,549 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:22,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:22,554 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-29 00:44:22,559 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-29 00:44:22,559 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-29 00:44:22,565 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-29 00:44:22,570 [ scc.git] DEBUG Already up to date.
2024-11-29 00:44:22,570 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2024-11-29 00:44:22,896 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-11-29 00:44:22,896 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2024-11-29 00:44:22,903 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2024-11-29 00:44:23,220 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-11-29 00:44:23,221 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2024-11-29 00:44:23,227 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2024-11-29 00:44:23,514 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-11-29 00:44:23,514 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2024-11-29 00:44:23,518 [ scc.git] DEBUG ## Unique users: []
2024-11-29 00:44:23,518 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:23,518 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:23,523 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-11-29 00:44:23,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:23,535 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-11-29 00:44:23,548 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2024-11-29 00:44:23,548 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-29 00:44:23,551 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2024-11-29 00:44:23,551 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2024-11-29 00:44:23,551 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2024-11-29 00:44:23,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:44:23,688 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2024-11-29 00:44:23,697 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:23,702 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2024-11-29 00:44:23,723 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2024-11-29 00:44:23,723 [ scc.git] DEBUG Auto-merging src/app/context.js
2024-11-29 00:44:23,723 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2024-11-29 00:44:23,723 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2024-11-29 00:44:23,723 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-29 00:44:23,728 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2024-11-29 00:44:23,728 [ scc.git] DEBUG src/app/context.js | 6 +-
2024-11-29 00:44:23,728 [ scc.git] DEBUG src/app/header.html | 5 +
2024-11-29 00:44:23,728 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2024-11-29 00:44:23,728 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2024-11-29 00:44:23,728 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2024-11-29 00:44:23,728 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2024-11-29 00:44:23,728 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2024-11-29 00:44:24,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:44:24,068 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2024-11-29 00:44:24,079 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:24,086 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2024-11-29 00:44:24,106 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2024-11-29 00:44:24,106 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-29 00:44:24,109 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2024-11-29 00:44:24,109 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2024-11-29 00:44:24,109 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2024-11-29 00:44:24,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:44:24,448 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-29 00:44:24,487 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:24,487 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:24,493 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-29 00:44:24,532 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-29 00:44:24,539 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66fc02c610> has no local changes
2024-11-29 00:44:24,540 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
Generated by OMERO-plugins-push#262 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/)'
2024-11-29 00:44:24,549 [ scc.git] DEBUG [detached HEAD a3cd265] merge master -Dorg -Ssuccess-only
2024-11-29 00:44:24,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:44:24,549 [ scc.repo] DEBUG ## PRs found:
2024-11-29 00:44:24,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2024-11-29 00:44:25,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2024-11-29 00:44:25,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2024-11-29 00:44:26,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-11-29 00:44:26,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:44:27,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-11-29 00:44:27,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:44:27,790 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2024-11-29 00:44:27,791 [ scc.repo] DEBUG ## Branches found:
2024-11-29 00:44:27,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-11-29 00:44:27,791 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:27,791 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:27,798 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-29 00:44:27,803 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-29 00:44:27,804 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-29 00:44:27,816 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-29 00:44:27,828 [ scc.git] DEBUG Already up to date.
2024-11-29 00:44:27,828 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2024-11-29 00:44:28,163 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2024-11-29 00:44:28,163 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2024-11-29 00:44:28,168 [ scc.git] DEBUG ## Unique users: []
2024-11-29 00:44:28,168 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:28,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:28,174 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-11-29 00:44:28,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:28,185 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-11-29 00:44:28,197 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-29 00:44:28,200 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2024-11-29 00:44:28,200 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2024-11-29 00:44:28,200 [ scc.git] DEBUG requirements.txt | 2 +-
2024-11-29 00:44:28,200 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2024-11-29 00:44:28,200 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2024-11-29 00:44:28,200 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2024-11-29 00:44:28,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:44:28,337 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-29 00:44:28,380 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:28,381 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:28,386 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-29 00:44:28,425 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-29 00:44:28,432 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66fc03ebb0> has no local changes
2024-11-29 00:44:28,432 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Generated by OMERO-plugins-push#262 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/)'
2024-11-29 00:44:28,441 [ scc.git] DEBUG [detached HEAD 6b513f6] merge master -Dorg -Ssuccess-only
2024-11-29 00:44:28,442 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:44:28,442 [ scc.repo] DEBUG ## PRs found:
2024-11-29 00:44:28,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2024-11-29 00:44:29,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/89 HTTP/1.1" 200 None
2024-11-29 00:44:29,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175 HTTP/1.1" 200 None
2024-11-29 00:44:30,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:44:30,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-29 00:44:31,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175 HTTP/1.1" 200 None
2024-11-29 00:44:31,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/dfc227486da13c78bc278fc534e59b40cbc97175?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:44:31,688 [ scc.repo] DEBUG - PR 89 jburel 'Build'
2024-11-29 00:44:32,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2024-11-29 00:44:32,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2024-11-29 00:44:33,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-11-29 00:44:33,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:44:34,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-11-29 00:44:34,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:44:34,509 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-11-29 00:44:34,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2024-11-29 00:44:35,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2024-11-29 00:44:35,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-11-29 00:44:36,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:44:36,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-11-29 00:44:37,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:44:37,341 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-11-29 00:44:37,341 [ scc.repo] DEBUG ## Branches found:
2024-11-29 00:44:37,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-11-29 00:44:37,342 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:37,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:37,349 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-29 00:44:37,355 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-29 00:44:37,355 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-29 00:44:37,361 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-29 00:44:37,367 [ scc.git] DEBUG Already up to date.
2024-11-29 00:44:37,368 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2024-11-29 00:44:37,672 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-11-29 00:44:37,672 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2024-11-29 00:44:37,677 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2024-11-29 00:44:37,993 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-11-29 00:44:37,994 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2024-11-29 00:44:37,999 [ scc.git] DEBUG Calling 'git fetch origin pull/89/head'
2024-11-29 00:44:38,277 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-11-29 00:44:38,278 [ scc.git] DEBUG * branch refs/pull/89/head -> FETCH_HEAD
2024-11-29 00:44:38,282 [ scc.git] DEBUG ## Unique users: []
2024-11-29 00:44:38,283 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:38,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:38,289 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-11-29 00:44:38,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:38,304 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-11-29 00:44:38,319 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2024-11-29 00:44:38,320 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2024-11-29 00:44:38,320 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-11-29 00:44:38,320 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-11-29 00:44:38,320 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-29 00:44:38,321 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-29 00:44:38,327 [ scc.git] DEBUG Calling 'git reset --hard fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-11-29 00:44:38,337 [ scc.git] DEBUG HEAD is now at fc20959 Bump version: 0.13.0 → 0.13.1.dev0
2024-11-29 00:44:38,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:44:38,471 [ scc.git] DEBUG Calling 'git merge-base fc2095901f5dfd24ecd29a99092283f136de04d5 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-11-29 00:44:38,480 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-11-29 00:44:38,486 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#262](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/populate.py
- src/omero_metadata/cli.py
--conflicts
2024-11-29 00:44:38,491 [ scc.config] DEBUG Found github.token
2024-11-29 00:44:38,491 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2024-11-29 00:44:38,491 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2024-11-29 00:44:38,498 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:38,504 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2024-11-29 00:44:38,521 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-11-29 00:44:38,521 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-11-29 00:44:38,521 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2024-11-29 00:44:38,521 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-29 00:44:38,522 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-29 00:44:38,529 [ scc.git] DEBUG Calling 'git reset --hard fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-11-29 00:44:38,537 [ scc.git] DEBUG HEAD is now at fc20959 Bump version: 0.13.0 → 0.13.1.dev0
2024-11-29 00:44:38,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:44:38,871 [ scc.git] DEBUG Calling 'git merge-base fc2095901f5dfd24ecd29a99092283f136de04d5 78e55539b68e351ed5ef202854718b49a37729a7'
2024-11-29 00:44:38,879 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-11-29 00:44:38,884 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#262](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2024-11-29 00:44:38,889 [ scc.config] DEBUG Found github.token
2024-11-29 00:44:38,889 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2024-11-29 00:44:38,890 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dfc227486da13c78bc278fc534e59b40cbc97175'
2024-11-29 00:44:38,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:38,899 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 89 (Build) dfc227486da13c78bc278fc534e59b40cbc97175'
2024-11-29 00:44:38,910 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-29 00:44:38,912 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-11-29 00:44:38,912 [ scc.git] DEBUG 1 file changed, 7 insertions(+), 5 deletions(-)
2024-11-29 00:44:39,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:44:39,259 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-29 00:44:39,301 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:39,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:39,307 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-29 00:44:39,350 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-29 00:44:39,358 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66f47c0880> has no local changes
2024-11-29 00:44:39,358 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Already up to date.
Merged PRs:
- PR 89 jburel 'Build'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#262 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/)'
2024-11-29 00:44:39,367 [ scc.git] DEBUG [detached HEAD 3770bbf] merge master -Dorg -Ssuccess-only
2024-11-29 00:44:39,367 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:44:39,367 [ scc.repo] DEBUG ## PRs found:
2024-11-29 00:44:39,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2024-11-29 00:44:40,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2024-11-29 00:44:40,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2024-11-29 00:44:41,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2024-11-29 00:44:41,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2024-11-29 00:44:42,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2024-11-29 00:44:42,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2024-11-29 00:44:42,610 [ scc.repo] DEBUG ## Branches found:
2024-11-29 00:44:42,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-11-29 00:44:42,610 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:42,610 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:42,616 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-29 00:44:42,621 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-29 00:44:42,622 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-29 00:44:42,629 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-29 00:44:42,643 [ scc.git] DEBUG Updating 5d441c2..fb5ae86
2024-11-29 00:44:43,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/133 HTTP/1.1" 200 None
2024-11-29 00:44:44,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/129 HTTP/1.1" 200 None
2024-11-29 00:44:44,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/131 HTTP/1.1" 200 None
2024-11-29 00:44:45,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/128 HTTP/1.1" 200 None
2024-11-29 00:44:45,322 [ scc.git] DEBUG ## Unique users: []
2024-11-29 00:44:45,322 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:45,322 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:45,328 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-29 00:44:45,371 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:45,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:45,378 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-29 00:44:45,421 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-29 00:44:45,431 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66f47c0670> has no local changes
2024-11-29 00:44:45,431 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Updating 5d441c2..fb5ae86
Previously merged:
- PR 133 jburel 'Build'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
Generated by OMERO-plugins-push#262 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/)'
2024-11-29 00:44:45,443 [ scc.git] DEBUG [detached HEAD 6696e0a] merge master -Dorg -Ssuccess-only
2024-11-29 00:44:45,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:44:45,443 [ scc.repo] DEBUG ## PRs found:
2024-11-29 00:44:45,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2024-11-29 00:44:46,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/15 HTTP/1.1" 200 None
2024-11-29 00:44:46,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332 HTTP/1.1" 200 None
2024-11-29 00:44:47,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:44:47,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-29 00:44:48,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None
2024-11-29 00:44:48,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-11-29 00:44:49,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:44:49,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-11-29 00:44:50,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:44:50,214 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel'
2024-11-29 00:44:50,215 [ scc.repo] DEBUG ## Branches found:
2024-11-29 00:44:50,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-11-29 00:44:50,215 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:50,215 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:50,221 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-29 00:44:50,227 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-29 00:44:50,227 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-29 00:44:50,233 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-29 00:44:50,240 [ scc.git] DEBUG Already up to date.
2024-11-29 00:44:50,241 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-11-29 00:44:50,569 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2024-11-29 00:44:50,569 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-11-29 00:44:50,573 [ scc.git] DEBUG ## Unique users: []
2024-11-29 00:44:50,573 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:50,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:50,578 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-11-29 00:44:50,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:50,589 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-11-29 00:44:50,597 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-29 00:44:50,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:44:50,731 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-29 00:44:50,774 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:50,774 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:50,779 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-29 00:44:50,818 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-29 00:44:50,824 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66fc01fcd0> has no local changes
2024-11-29 00:44:50,824 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Excluded PRs:
- PR 15 jburel 'Build' (status: failure)
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Generated by OMERO-plugins-push#262 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/)'
2024-11-29 00:44:50,832 [ scc.git] DEBUG [detached HEAD d3b7e32] merge master -Dorg -Ssuccess-only
2024-11-29 00:44:50,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:44:50,833 [ scc.repo] DEBUG ## PRs found:
2024-11-29 00:44:51,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2024-11-29 00:44:51,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/29 HTTP/1.1" 200 None
2024-11-29 00:44:52,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-11-29 00:44:52,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:44:53,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-11-29 00:44:53,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24?per_page=1 HTTP/1.1" 200 None
2024-11-29 00:44:54,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-11-29 00:44:54,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/status HTTP/1.1" 200 None
2024-11-29 00:44:54,637 [ scc.repo] DEBUG - PR 29 jburel 'Build'
2024-11-29 00:44:55,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None
2024-11-29 00:44:55,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None
2024-11-29 00:44:56,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None
2024-11-29 00:44:56,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-11-29 00:44:57,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:44:57,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-11-29 00:44:57,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:44:57,841 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-11-29 00:44:57,841 [ scc.repo] DEBUG ## Branches found:
2024-11-29 00:44:57,842 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-11-29 00:44:57,842 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:57,842 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:57,848 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-29 00:44:57,854 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-29 00:44:57,854 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-29 00:44:57,861 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-29 00:44:57,872 [ scc.git] DEBUG Already up to date.
2024-11-29 00:44:57,872 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head'
2024-11-29 00:44:58,189 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-11-29 00:44:58,189 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD
2024-11-29 00:44:58,194 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head'
2024-11-29 00:44:58,480 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-11-29 00:44:58,480 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD
2024-11-29 00:44:58,485 [ scc.git] DEBUG ## Unique users: []
2024-11-29 00:44:58,486 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:58,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:58,492 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61'
2024-11-29 00:44:58,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:58,506 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61'
2024-11-29 00:44:58,517 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py
2024-11-29 00:44:58,517 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-29 00:44:58,520 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++
2024-11-29 00:44:58,520 [ scc.git] DEBUG 1 file changed, 33 insertions(+)
2024-11-29 00:44:58,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:44:58,658 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24'
2024-11-29 00:44:58,666 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:58,672 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Build) 92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24'
2024-11-29 00:44:58,683 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-29 00:44:58,686 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-11-29 00:44:58,686 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-11-29 00:44:58,686 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 6 deletions(-)
2024-11-29 00:44:59,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:44:59,041 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-29 00:44:59,089 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:44:59,089 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:44:59,099 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-29 00:44:59,185 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-29 00:44:59,195 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66f47ee730> has no local changes
2024-11-29 00:44:59,196 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
- PR 29 jburel 'Build'
Generated by OMERO-plugins-push#262 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/)'
2024-11-29 00:44:59,210 [ scc.git] DEBUG [detached HEAD e13c718] merge master -Dorg -Ssuccess-only
2024-11-29 00:44:59,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:44:59,211 [ scc.repo] DEBUG ## PRs found:
2024-11-29 00:44:59,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2024-11-29 00:45:00,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/21 HTTP/1.1" 200 None
2024-11-29 00:45:00,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None
2024-11-29 00:45:01,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:45:01,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-29 00:45:02,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None
2024-11-29 00:45:02,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:45:02,471 [ scc.repo] DEBUG - PR 21 jburel 'Build'
2024-11-29 00:45:02,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2024-11-29 00:45:03,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2024-11-29 00:45:03,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-11-29 00:45:04,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:45:04,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-11-29 00:45:05,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:45:05,391 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2024-11-29 00:45:05,391 [ scc.repo] DEBUG ## Branches found:
2024-11-29 00:45:05,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-11-29 00:45:05,391 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:05,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:05,399 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-29 00:45:05,405 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-29 00:45:05,405 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-29 00:45:05,412 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-29 00:45:05,419 [ scc.git] DEBUG Already up to date.
2024-11-29 00:45:05,419 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-11-29 00:45:05,715 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-11-29 00:45:05,715 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-11-29 00:45:05,720 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head'
2024-11-29 00:45:06,037 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-11-29 00:45:06,038 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD
2024-11-29 00:45:06,043 [ scc.git] DEBUG ## Unique users: []
2024-11-29 00:45:06,043 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:06,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:06,051 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-11-29 00:45:06,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:06,065 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-11-29 00:45:06,076 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2024-11-29 00:45:06,076 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2024-11-29 00:45:06,076 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2024-11-29 00:45:06,076 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2024-11-29 00:45:06,076 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2024-11-29 00:45:06,076 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2024-11-29 00:45:06,076 [ scc.git] DEBUG Auto-merging setup.py
2024-11-29 00:45:06,076 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2024-11-29 00:45:06,076 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-29 00:45:06,077 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-29 00:45:06,083 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319'
2024-11-29 00:45:06,093 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0
2024-11-29 00:45:06,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:06,242 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-11-29 00:45:06,250 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319'
2024-11-29 00:45:06,258 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#262](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/views.py
- setup.py
- omero_signup/urls.py
- omero_signup/signup_settings.py
--conflicts
2024-11-29 00:45:06,265 [ scc.config] DEBUG Found github.token
2024-11-29 00:45:06,265 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2024-11-29 00:45:06,265 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8cd79097b8e36aef506d1589aa1bc281a0fc1b1'
2024-11-29 00:45:06,273 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:06,280 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Build) d8cd79097b8e36aef506d1589aa1bc281a0fc1b1'
2024-11-29 00:45:06,291 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-29 00:45:06,294 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-11-29 00:45:06,294 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-11-29 00:45:06,294 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++
2024-11-29 00:45:06,294 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-)
2024-11-29 00:45:06,294 [ scc.git] DEBUG create mode 100755 .omeroci/app-build
2024-11-29 00:45:06,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:06,690 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-29 00:45:06,731 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:06,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:06,738 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-29 00:45:06,778 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-29 00:45:06,785 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66f47ee610> has no local changes
2024-11-29 00:45:06,785 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 21 jburel 'Build'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#262 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/)'
2024-11-29 00:45:06,794 [ scc.git] DEBUG [detached HEAD f50e242] merge master -Dorg -Ssuccess-only
2024-11-29 00:45:06,794 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:06,794 [ scc.repo] DEBUG ## PRs found:
2024-11-29 00:45:07,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2024-11-29 00:45:07,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2024-11-29 00:45:08,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2024-11-29 00:45:08,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-11-29 00:45:09,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:45:09,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-11-29 00:45:10,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:45:10,107 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-11-29 00:45:10,107 [ scc.repo] DEBUG ## Branches found:
2024-11-29 00:45:10,108 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-11-29 00:45:10,108 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:10,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:10,118 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-29 00:45:10,125 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-29 00:45:10,125 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-29 00:45:10,133 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-29 00:45:10,139 [ scc.git] DEBUG Already up to date.
2024-11-29 00:45:10,140 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2024-11-29 00:45:10,451 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2024-11-29 00:45:10,452 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2024-11-29 00:45:10,456 [ scc.git] DEBUG ## Unique users: []
2024-11-29 00:45:10,456 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:10,457 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:10,462 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2024-11-29 00:45:10,470 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:10,475 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2024-11-29 00:45:10,489 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-29 00:45:10,492 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2024-11-29 00:45:10,492 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2024-11-29 00:45:10,492 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2024-11-29 00:45:10,492 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2024-11-29 00:45:10,492 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2024-11-29 00:45:10,492 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2024-11-29 00:45:10,492 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2024-11-29 00:45:10,495 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2024-11-29 00:45:10,495 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2024-11-29 00:45:10,495 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2024-11-29 00:45:10,495 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2024-11-29 00:45:10,495 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2024-11-29 00:45:10,495 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2024-11-29 00:45:10,495 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2024-11-29 00:45:10,495 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2024-11-29 00:45:10,495 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2024-11-29 00:45:10,495 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2024-11-29 00:45:10,495 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2024-11-29 00:45:10,495 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2024-11-29 00:45:10,495 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2024-11-29 00:45:10,495 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2024-11-29 00:45:10,495 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2024-11-29 00:45:10,496 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2024-11-29 00:45:10,496 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2024-11-29 00:45:10,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:10,628 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-29 00:45:10,675 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:10,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:10,681 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-29 00:45:10,727 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-29 00:45:10,737 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66f47f07c0> has no local changes
2024-11-29 00:45:10,737 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Generated by OMERO-plugins-push#262 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/)'
2024-11-29 00:45:10,749 [ scc.git] DEBUG [detached HEAD ba7e3d7] merge master -Dorg -Ssuccess-only
2024-11-29 00:45:10,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:10,750 [ scc.repo] DEBUG ## PRs found:
2024-11-29 00:45:11,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2024-11-29 00:45:11,046 [ scc.repo] DEBUG ## Branches found:
2024-11-29 00:45:11,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-11-29 00:45:11,046 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:11,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:11,053 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-29 00:45:11,059 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-29 00:45:11,059 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-29 00:45:11,064 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-29 00:45:11,075 [ scc.git] DEBUG Updating aca9e9c..100f6ae
2024-11-29 00:45:11,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls/13 HTTP/1.1" 200 None
2024-11-29 00:45:11,761 [ scc.git] DEBUG ## Unique users: []
2024-11-29 00:45:11,762 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:11,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:11,768 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-29 00:45:11,818 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:11,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:11,825 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-29 00:45:11,865 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-29 00:45:11,872 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66f4750430> has no local changes
2024-11-29 00:45:11,872 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Updating aca9e9c..100f6ae
Previously merged:
- PR 13 jburel 'Build'
Generated by OMERO-plugins-push#262 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/)'
2024-11-29 00:45:11,881 [ scc.git] DEBUG [detached HEAD f0f7a3e] merge master -Dorg -Ssuccess-only
2024-11-29 00:45:11,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:11,882 [ scc.repo] DEBUG ## PRs found:
2024-11-29 00:45:12,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None
2024-11-29 00:45:12,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None
2024-11-29 00:45:13,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None
2024-11-29 00:45:13,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:45:14,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-29 00:45:14,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None
2024-11-29 00:45:15,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:45:15,175 [ scc.repo] DEBUG - PR 20 jburel 'Build'
2024-11-29 00:45:15,175 [ scc.repo] DEBUG ## Branches found:
2024-11-29 00:45:15,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-11-29 00:45:15,175 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:15,175 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:15,181 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-29 00:45:15,186 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-29 00:45:15,186 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-29 00:45:15,192 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-29 00:45:15,197 [ scc.git] DEBUG Already up to date.
2024-11-29 00:45:15,198 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head'
2024-11-29 00:45:15,523 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope
2024-11-29 00:45:15,523 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD
2024-11-29 00:45:15,527 [ scc.git] DEBUG ## Unique users: []
2024-11-29 00:45:15,527 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:15,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:15,533 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea'
2024-11-29 00:45:15,538 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:15,543 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea'
2024-11-29 00:45:15,551 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-29 00:45:15,554 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-11-29 00:45:15,554 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-11-29 00:45:15,554 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++
2024-11-29 00:45:15,554 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-)
2024-11-29 00:45:15,554 [ scc.git] DEBUG create mode 100755 .omeroci/app-build
2024-11-29 00:45:15,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:15,692 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-29 00:45:15,735 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:15,735 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:15,740 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-29 00:45:15,781 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-29 00:45:15,787 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66f4750f70> has no local changes
2024-11-29 00:45:15,787 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Already up to date.
Merged PRs:
- PR 20 jburel 'Build'
Generated by OMERO-plugins-push#262 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/)'
2024-11-29 00:45:15,795 [ scc.git] DEBUG [detached HEAD 0fec680] merge master -Dorg -Ssuccess-only
2024-11-29 00:45:15,796 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:15,796 [ scc.git] INFO Overriding base-branch from master to main
2024-11-29 00:45:15,796 [ scc.repo] DEBUG ## PRs found:
2024-11-29 00:45:16,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2024-11-29 00:45:16,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None
2024-11-29 00:45:17,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None
2024-11-29 00:45:17,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None
2024-11-29 00:45:18,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:45:18,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-29 00:45:19,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17 HTTP/1.1" 200 None
2024-11-29 00:45:19,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17/comments HTTP/1.1" 200 None
2024-11-29 00:45:20,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95 HTTP/1.1" 200 None
2024-11-29 00:45:20,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:45:21,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-29 00:45:21,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2024-11-29 00:45:22,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2024-11-29 00:45:22,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2024-11-29 00:45:23,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-11-29 00:45:23,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:45:24,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-11-29 00:45:24,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:45:24,461 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-11-29 00:45:24,461 [ scc.repo] DEBUG ## Branches found:
2024-11-29 00:45:24,461 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-11-29 00:45:24,461 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:24,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:24,467 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2024-11-29 00:45:24,472 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-29 00:45:24,473 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2024-11-29 00:45:24,478 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2024-11-29 00:45:24,483 [ scc.git] DEBUG Already up to date.
2024-11-29 00:45:24,484 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2024-11-29 00:45:24,810 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2024-11-29 00:45:24,810 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2024-11-29 00:45:24,815 [ scc.git] DEBUG ## Unique users: []
2024-11-29 00:45:24,815 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:24,815 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:24,821 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-11-29 00:45:24,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:24,834 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-11-29 00:45:24,845 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2024-11-29 00:45:24,845 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2024-11-29 00:45:24,845 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-29 00:45:24,846 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-29 00:45:24,853 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-11-29 00:45:24,859 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0
2024-11-29 00:45:24,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:24,995 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-11-29 00:45:25,001 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-11-29 00:45:25,007 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#262](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2024-11-29 00:45:25,012 [ scc.config] DEBUG Found github.token
2024-11-29 00:45:25,012 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2024-11-29 00:45:25,013 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-29 00:45:25,053 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:25,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:25,061 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-29 00:45:25,101 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-29 00:45:25,108 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66f4750490> has no local changes
2024-11-29 00:45:25,108 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 17 jburel 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#262 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/)'
2024-11-29 00:45:25,116 [ scc.git] DEBUG [detached HEAD 1ff5e55] merge master -Dorg -Ssuccess-only
2024-11-29 00:45:25,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:25,117 [ scc.repo] DEBUG ## PRs found:
2024-11-29 00:45:25,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2024-11-29 00:45:25,407 [ scc.repo] DEBUG ## Branches found:
2024-11-29 00:45:25,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-11-29 00:45:25,407 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:25,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:25,413 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-29 00:45:25,418 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-29 00:45:25,418 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-29 00:45:25,424 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-29 00:45:25,434 [ scc.git] DEBUG Updating adfa132..70b01ed
2024-11-29 00:45:26,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls/24 HTTP/1.1" 200 None
2024-11-29 00:45:26,097 [ scc.git] DEBUG ## Unique users: []
2024-11-29 00:45:26,097 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:26,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:26,105 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-29 00:45:26,160 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:26,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:26,171 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-29 00:45:26,220 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-29 00:45:26,229 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66f4762c10> has no local changes
2024-11-29 00:45:26,229 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Updating adfa132..70b01ed
Previously merged:
- PR 24 jburel 'Build'
Generated by OMERO-plugins-push#262 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/)'
2024-11-29 00:45:26,240 [ scc.git] DEBUG [detached HEAD 524200d] merge master -Dorg -Ssuccess-only
2024-11-29 00:45:26,241 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:26,241 [ scc.repo] DEBUG ## PRs found:
2024-11-29 00:45:26,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2024-11-29 00:45:26,503 [ scc.repo] DEBUG ## Branches found:
2024-11-29 00:45:26,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-11-29 00:45:26,503 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:26,503 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:26,509 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-29 00:45:26,515 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-29 00:45:26,515 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-29 00:45:26,521 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-29 00:45:26,531 [ scc.git] DEBUG Updating 8da48e1..5bfef29
2024-11-29 00:45:27,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls/36 HTTP/1.1" 200 None
2024-11-29 00:45:27,235 [ scc.git] DEBUG ## Unique users: []
2024-11-29 00:45:27,236 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:27,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:27,245 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-29 00:45:27,291 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:27,292 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:27,298 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-29 00:45:27,345 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-29 00:45:27,353 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66f4706970> has no local changes
2024-11-29 00:45:27,353 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Updating 8da48e1..5bfef29
Previously merged:
- PR 36 jburel 'Build'
Generated by OMERO-plugins-push#262 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/)'
2024-11-29 00:45:27,363 [ scc.git] DEBUG [detached HEAD fed2222] merge master -Dorg -Ssuccess-only
2024-11-29 00:45:27,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:27,364 [ scc.repo] DEBUG ## PRs found:
2024-11-29 00:45:27,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2024-11-29 00:45:28,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2024-11-29 00:45:28,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2024-11-29 00:45:29,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-11-29 00:45:29,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:45:30,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-11-29 00:45:30,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:45:30,619 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2024-11-29 00:45:30,619 [ scc.repo] DEBUG ## Branches found:
2024-11-29 00:45:30,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-11-29 00:45:30,619 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:30,619 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:30,626 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-29 00:45:30,632 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-29 00:45:30,632 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-29 00:45:30,640 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-29 00:45:30,646 [ scc.git] DEBUG Already up to date.
2024-11-29 00:45:30,646 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2024-11-29 00:45:30,954 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2024-11-29 00:45:30,954 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2024-11-29 00:45:30,958 [ scc.git] DEBUG ## Unique users: []
2024-11-29 00:45:30,958 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:30,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:30,966 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-11-29 00:45:30,972 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:30,978 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-11-29 00:45:30,989 [ scc.git] DEBUG Auto-merging Dockerfile
2024-11-29 00:45:30,989 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2024-11-29 00:45:30,990 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-29 00:45:30,990 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-29 00:45:30,997 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-11-29 00:45:31,006 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2024-11-29 00:45:31,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:31,135 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-11-29 00:45:31,142 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-11-29 00:45:31,149 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#262](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2024-11-29 00:45:31,154 [ scc.config] DEBUG Found github.token
2024-11-29 00:45:31,155 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2024-11-29 00:45:31,155 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-29 00:45:31,200 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:31,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:31,207 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-29 00:45:31,251 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-29 00:45:31,260 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66f47065e0> has no local changes
2024-11-29 00:45:31,260 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#262 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/)'
2024-11-29 00:45:31,271 [ scc.git] DEBUG [detached HEAD 0b32f7b] merge master -Dorg -Ssuccess-only
2024-11-29 00:45:31,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:31,272 [ scc.git] INFO Overriding base-branch from master to develop
2024-11-29 00:45:31,272 [ scc.repo] DEBUG ## PRs found:
2024-11-29 00:45:31,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-11-29 00:45:32,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-11-29 00:45:32,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-11-29 00:45:33,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-11-29 00:45:33,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:45:34,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-29 00:45:34,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-11-29 00:45:34,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:45:34,921 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-11-29 00:45:35,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-11-29 00:45:35,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-11-29 00:45:36,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None
2024-11-29 00:45:36,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-11-29 00:45:37,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-11-29 00:45:37,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-11-29 00:45:38,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-11-29 00:45:38,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-11-29 00:45:39,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-29 00:45:39,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-11-29 00:45:40,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-11-29 00:45:40,187 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-11-29 00:45:40,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-11-29 00:45:41,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-11-29 00:45:41,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-11-29 00:45:42,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-11-29 00:45:42,128 [ scc.repo] DEBUG ## Branches found:
2024-11-29 00:45:42,128 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-11-29 00:45:42,128 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:42,128 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:42,134 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-11-29 00:45:42,138 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-29 00:45:42,139 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-11-29 00:45:42,144 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-11-29 00:45:42,149 [ scc.git] DEBUG Already up to date.
2024-11-29 00:45:42,149 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-11-29 00:45:42,481 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-11-29 00:45:42,481 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-11-29 00:45:42,486 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-11-29 00:45:42,781 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-11-29 00:45:42,781 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-11-29 00:45:42,787 [ scc.git] DEBUG ## Unique users: []
2024-11-29 00:45:42,787 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:42,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:42,795 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-11-29 00:45:42,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:42,810 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-11-29 00:45:42,824 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-11-29 00:45:42,824 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-11-29 00:45:42,824 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-29 00:45:42,825 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-29 00:45:42,833 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-11-29 00:45:42,841 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-11-29 00:45:42,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:42,982 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-11-29 00:45:42,990 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-11-29 00:45:43,005 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#262](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-11-29 00:45:43,019 [ scc.config] DEBUG Found github.token
2024-11-29 00:45:43,019 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-11-29 00:45:43,020 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-11-29 00:45:43,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:43,043 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-11-29 00:45:43,060 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-29 00:45:43,063 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-11-29 00:45:43,063 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-11-29 00:45:43,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:43,387 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-29 00:45:43,434 [ scc.git] DEBUG Get sha1 of %s
2024-11-29 00:45:43,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-29 00:45:43,439 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-29 00:45:43,481 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-29 00:45:43,488 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66f47adf40> has no local changes
2024-11-29 00:45:43,488 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#262 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/)'
2024-11-29 00:45:43,497 [ scc.git] DEBUG [detached HEAD 8ed4aa7] merge master -Dorg -Ssuccess-only
2024-11-29 00:45:43,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:43,498 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-29 00:45:43,592 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2024-11-29 00:45:43,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:43,787 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2024-11-29 00:45:43,794 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2024-11-29 00:45:44,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:44,178 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2024-11-29 00:45:44,183 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2024-11-29 00:45:44,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:44,554 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2024-11-29 00:45:44,559 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2024-11-29 00:45:44,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:44,952 [ scc.config] DEBUG Found submodule.omero-figure.url
2024-11-29 00:45:45,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:45,332 [ scc.config] DEBUG Found submodule.omero-figure.branch
2024-11-29 00:45:45,339 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2024-11-29 00:45:45,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:45,711 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2024-11-29 00:45:45,717 [ scc.config] DEBUG Found submodule.omero-gallery.url
2024-11-29 00:45:46,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:46,089 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2024-11-29 00:45:46,095 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2024-11-29 00:45:46,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:46,462 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2024-11-29 00:45:46,468 [ scc.config] DEBUG Found submodule.omero-mapr.url
2024-11-29 00:45:46,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:46,853 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2024-11-29 00:45:46,860 [ scc.config] DEBUG Found submodule.omero-metadata.url
2024-11-29 00:45:47,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:47,245 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2024-11-29 00:45:47,251 [ scc.config] DEBUG Found submodule.omero-parade.url
2024-11-29 00:45:47,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:47,626 [ scc.config] DEBUG Found submodule.omero-parade.branch
2024-11-29 00:45:47,630 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2024-11-29 00:45:47,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:48,009 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2024-11-29 00:45:48,015 [ scc.config] DEBUG Found submodule.omero-rois.url
2024-11-29 00:45:48,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:48,402 [ scc.config] DEBUG Found submodule.omero-signup.url
2024-11-29 00:45:48,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:48,795 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2024-11-29 00:45:49,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:49,178 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2024-11-29 00:45:49,183 [ scc.config] DEBUG Found submodule.omero-upload.url
2024-11-29 00:45:49,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:49,572 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2024-11-29 00:45:49,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:49,954 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2024-11-29 00:45:50,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:50,358 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2024-11-29 00:45:50,364 [ scc.config] DEBUG Found submodule.omero-weberror.url
2024-11-29 00:45:50,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:50,737 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2024-11-29 00:45:50,742 [ scc.config] DEBUG Found submodule.omero-webtest.url
2024-11-29 00:45:51,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:51,130 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2024-11-29 00:45:51,136 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2024-11-29 00:45:51,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:51,520 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2024-11-29 00:45:51,525 [ scc.config] DEBUG Found submodule.scripts.url
2024-11-29 00:45:51,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-29 00:45:51,909 [ scc.config] DEBUG Found submodule.scripts.branch
2024-11-29 00:45:51,909 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-29 00:45:51,993 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66feceeee0> has local changes
2024-11-29 00:45:51,993 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 406 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `b4102d4`'
- PR 407 dependabot[bot] 'Bump omero-gallery from `56f4435` to `2a621da`'
- PR 408 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `c0517ed`'
- PR 409 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `0a557da`'
- PR 410 dependabot[bot] 'Bump omero-figure from `24444fe` to `1c67437`'
Repository: ome/minimal-omero-client
Updating 4628e82..ca8c2ea
Previously merged:
- PR 67 jburel 'Gateway 5.10.0'
- PR 68 jburel 'Bump action '
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Updating 027b3e6..4777ef8
Previously merged:
- PR 27 jburel 'Build'
- PR 25 jburel 'review message'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
- PR 59 will-moore 'Apply settings to Plate' (status: failure)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Updating 9b73dd9..11d3587
Previously merged:
- PR 165 jburel 'Build'
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 102 will-moore 'Zarr export tests'
- PR 123 will-moore 'Support export of Fileset:ID'
Repository: ome/omero-figure
Excluded PRs:
- PR 600 Rdornier 'Label on rois' (user: Rdornier)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 1c674373..1dfb1389
Previously merged:
- PR 595 Rdornier 'Rotate image panel by 90°'
Merged PRs:
- PR 592 will-moore 'Filter owners and groups dropdown lists'
- PR 602 will-moore 'Changelog 7.2.0'
- PR 603 will-moore 'Inset bugfixes'
Repository: ome/omero-fpbioimage
Updating e5b3ca3..3b6c05a
Previously merged:
- PR 30 jburel 'Build'
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Repository: ome/omero-metadata
Already up to date.
Merged PRs:
- PR 89 jburel 'Build'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Updating 5d441c2..fb5ae86
Previously merged:
- PR 133 jburel 'Build'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
Repository: ome/omero-prometheus-tools
Excluded PRs:
- PR 15 jburel 'Build' (status: failure)
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
- PR 29 jburel 'Build'
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 21 jburel 'Build'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Repository: ome/omero-upload
Updating aca9e9c..100f6ae
Previously merged:
- PR 13 jburel 'Build'
Repository: ome/omero-virtual-microscope
Already up to date.
Merged PRs:
- PR 20 jburel 'Build'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 17 jburel 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Updating adfa132..70b01ed
Previously merged:
- PR 24 jburel 'Build'
Repository: openmicroscopy/omero-webtest
Updating 8da48e1..5bfef29
Previously merged:
- PR 36 jburel 'Build'
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#262 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/262/)'
2024-11-29 00:45:52,008 [ scc.git] DEBUG [detached HEAD 845d399] merge master -Dorg -Ssuccess-only
2024-11-29 00:45:52,008 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2024-11-29 00:45:52,009 [ scc.merge] INFO Repository: ome/omero-plugins
2024-11-29 00:45:52,009 [ scc.merge] INFO Already up to date.
2024-11-29 00:45:52,009 [ scc.merge] INFO
2024-11-29 00:45:52,009 [ scc.merge] INFO Merged PRs:
2024-11-29 00:45:52,009 [ scc.merge] INFO - PR 406 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `b4102d4`'
2024-11-29 00:45:52,009 [ scc.merge] INFO - PR 407 dependabot[bot] 'Bump omero-gallery from `56f4435` to `2a621da`'
2024-11-29 00:45:52,009 [ scc.merge] INFO - PR 408 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `c0517ed`'
2024-11-29 00:45:52,009 [ scc.merge] INFO - PR 409 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `0a557da`'
2024-11-29 00:45:52,009 [ scc.merge] INFO - PR 410 dependabot[bot] 'Bump omero-figure from `24444fe` to `1c67437`'
2024-11-29 00:45:52,009 [ scc.merge] INFO
2024-11-29 00:45:52,009 [ scc.merge] INFO Repository: ome/minimal-omero-client
2024-11-29 00:45:52,009 [ scc.merge] INFO Updating 4628e82..ca8c2ea
2024-11-29 00:45:52,009 [ scc.merge] INFO Previously merged:
2024-11-29 00:45:52,009 [ scc.merge] INFO - PR 67 jburel 'Gateway 5.10.0'
2024-11-29 00:45:52,009 [ scc.merge] INFO - PR 68 jburel 'Bump action '
2024-11-29 00:45:52,009 [ scc.merge] INFO
2024-11-29 00:45:52,009 [ scc.merge] INFO
2024-11-29 00:45:52,009 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2024-11-29 00:45:52,009 [ scc.merge] INFO Excluded PRs:
2024-11-29 00:45:52,009 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2024-11-29 00:45:52,009 [ scc.merge] INFO Updating 027b3e6..4777ef8
2024-11-29 00:45:52,009 [ scc.merge] INFO Previously merged:
2024-11-29 00:45:52,009 [ scc.merge] INFO - PR 27 jburel 'Build'
2024-11-29 00:45:52,009 [ scc.merge] INFO - PR 25 jburel 'review message'
2024-11-29 00:45:52,009 [ scc.merge] INFO
2024-11-29 00:45:52,010 [ scc.merge] INFO
2024-11-29 00:45:52,010 [ scc.merge] INFO Repository: ome/omero-cli-render
2024-11-29 00:45:52,010 [ scc.merge] INFO Excluded PRs:
2024-11-29 00:45:52,010 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
2024-11-29 00:45:52,010 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' (status: failure)
2024-11-29 00:45:52,010 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2024-11-29 00:45:52,010 [ scc.merge] INFO Already up to date.
2024-11-29 00:45:52,010 [ scc.merge] INFO
2024-11-29 00:45:52,010 [ scc.merge] INFO
2024-11-29 00:45:52,010 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2024-11-29 00:45:52,010 [ scc.merge] INFO Excluded PRs:
2024-11-29 00:45:52,010 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-11-29 00:45:52,010 [ scc.merge] INFO Updating 9b73dd9..11d3587
2024-11-29 00:45:52,010 [ scc.merge] INFO Previously merged:
2024-11-29 00:45:52,010 [ scc.merge] INFO - PR 165 jburel 'Build'
2024-11-29 00:45:52,010 [ scc.merge] INFO
2024-11-29 00:45:52,010 [ scc.merge] INFO Merged PRs:
2024-11-29 00:45:52,010 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2024-11-29 00:45:52,010 [ scc.merge] INFO
2024-11-29 00:45:52,010 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-29 00:45:52,010 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests'
2024-11-29 00:45:52,010 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID'
2024-11-29 00:45:52,010 [ scc.merge] INFO
2024-11-29 00:45:52,010 [ scc.merge] INFO Repository: ome/omero-figure
2024-11-29 00:45:52,010 [ scc.merge] INFO Excluded PRs:
2024-11-29 00:45:52,010 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier)
2024-11-29 00:45:52,010 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2024-11-29 00:45:52,010 [ scc.merge] INFO Updating 1c674373..1dfb1389
2024-11-29 00:45:52,010 [ scc.merge] INFO Previously merged:
2024-11-29 00:45:52,010 [ scc.merge] INFO - PR 595 Rdornier 'Rotate image panel by 90°'
2024-11-29 00:45:52,010 [ scc.merge] INFO
2024-11-29 00:45:52,010 [ scc.merge] INFO Merged PRs:
2024-11-29 00:45:52,010 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists'
2024-11-29 00:45:52,010 [ scc.merge] INFO - PR 602 will-moore 'Changelog 7.2.0'
2024-11-29 00:45:52,011 [ scc.merge] INFO - PR 603 will-moore 'Inset bugfixes'
2024-11-29 00:45:52,011 [ scc.merge] INFO
2024-11-29 00:45:52,011 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2024-11-29 00:45:52,011 [ scc.merge] INFO Updating e5b3ca3..3b6c05a
2024-11-29 00:45:52,011 [ scc.merge] INFO Previously merged:
2024-11-29 00:45:52,011 [ scc.merge] INFO - PR 30 jburel 'Build'
2024-11-29 00:45:52,011 [ scc.merge] INFO
2024-11-29 00:45:52,011 [ scc.merge] INFO Merged PRs:
2024-11-29 00:45:52,011 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2024-11-29 00:45:52,011 [ scc.merge] INFO
2024-11-29 00:45:52,011 [ scc.merge] INFO Repository: ome/omero-gallery
2024-11-29 00:45:52,011 [ scc.merge] INFO Already up to date.
2024-11-29 00:45:52,011 [ scc.merge] INFO
2024-11-29 00:45:52,011 [ scc.merge] INFO Merged PRs:
2024-11-29 00:45:52,011 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2024-11-29 00:45:52,011 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2024-11-29 00:45:52,011 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2024-11-29 00:45:52,011 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2024-11-29 00:45:52,011 [ scc.merge] INFO
2024-11-29 00:45:52,011 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-29 00:45:52,011 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2024-11-29 00:45:52,011 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2024-11-29 00:45:52,011 [ scc.merge] INFO
2024-11-29 00:45:52,011 [ scc.merge] INFO Repository: ome/omero-iviewer
2024-11-29 00:45:52,011 [ scc.merge] INFO Excluded PRs:
2024-11-29 00:45:52,011 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2024-11-29 00:45:52,011 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2024-11-29 00:45:52,011 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2024-11-29 00:45:52,011 [ scc.merge] INFO Already up to date.
2024-11-29 00:45:52,011 [ scc.merge] INFO
2024-11-29 00:45:52,011 [ scc.merge] INFO Merged PRs:
2024-11-29 00:45:52,011 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2024-11-29 00:45:52,011 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2024-11-29 00:45:52,011 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2024-11-29 00:45:52,011 [ scc.merge] INFO
2024-11-29 00:45:52,011 [ scc.merge] INFO Repository: ome/omero-mapr
2024-11-29 00:45:52,011 [ scc.merge] INFO Excluded PRs:
2024-11-29 00:45:52,012 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2024-11-29 00:45:52,012 [ scc.merge] INFO Already up to date.
2024-11-29 00:45:52,012 [ scc.merge] INFO
2024-11-29 00:45:52,012 [ scc.merge] INFO Merged PRs:
2024-11-29 00:45:52,012 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2024-11-29 00:45:52,012 [ scc.merge] INFO
2024-11-29 00:45:52,012 [ scc.merge] INFO Repository: ome/omero-metadata
2024-11-29 00:45:52,012 [ scc.merge] INFO Already up to date.
2024-11-29 00:45:52,012 [ scc.merge] INFO
2024-11-29 00:45:52,012 [ scc.merge] INFO Merged PRs:
2024-11-29 00:45:52,012 [ scc.merge] INFO - PR 89 jburel 'Build'
2024-11-29 00:45:52,012 [ scc.merge] INFO
2024-11-29 00:45:52,012 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-29 00:45:52,012 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-11-29 00:45:52,012 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-11-29 00:45:52,012 [ scc.merge] INFO
2024-11-29 00:45:52,012 [ scc.merge] INFO Repository: ome/omero-parade
2024-11-29 00:45:52,012 [ scc.merge] INFO Excluded PRs:
2024-11-29 00:45:52,012 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2024-11-29 00:45:52,012 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2024-11-29 00:45:52,012 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2024-11-29 00:45:52,012 [ scc.merge] INFO Updating 5d441c2..fb5ae86
2024-11-29 00:45:52,012 [ scc.merge] INFO Previously merged:
2024-11-29 00:45:52,012 [ scc.merge] INFO - PR 133 jburel 'Build'
2024-11-29 00:45:52,012 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-11-29 00:45:52,012 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-11-29 00:45:52,012 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-11-29 00:45:52,012 [ scc.merge] INFO
2024-11-29 00:45:52,012 [ scc.merge] INFO
2024-11-29 00:45:52,012 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2024-11-29 00:45:52,012 [ scc.merge] INFO Excluded PRs:
2024-11-29 00:45:52,012 [ scc.merge] INFO - PR 15 jburel 'Build' (status: failure)
2024-11-29 00:45:52,013 [ scc.merge] INFO Already up to date.
2024-11-29 00:45:52,013 [ scc.merge] INFO
2024-11-29 00:45:52,013 [ scc.merge] INFO Merged PRs:
2024-11-29 00:45:52,013 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel'
2024-11-29 00:45:52,013 [ scc.merge] INFO
2024-11-29 00:45:52,013 [ scc.merge] INFO Repository: ome/omero-rois
2024-11-29 00:45:52,013 [ scc.merge] INFO Excluded PRs:
2024-11-29 00:45:52,013 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-11-29 00:45:52,013 [ scc.merge] INFO Already up to date.
2024-11-29 00:45:52,013 [ scc.merge] INFO
2024-11-29 00:45:52,013 [ scc.merge] INFO Merged PRs:
2024-11-29 00:45:52,013 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-11-29 00:45:52,013 [ scc.merge] INFO - PR 29 jburel 'Build'
2024-11-29 00:45:52,013 [ scc.merge] INFO
2024-11-29 00:45:52,013 [ scc.merge] INFO Repository: ome/omero-signup
2024-11-29 00:45:52,013 [ scc.merge] INFO Already up to date.
2024-11-29 00:45:52,013 [ scc.merge] INFO
2024-11-29 00:45:52,013 [ scc.merge] INFO Merged PRs:
2024-11-29 00:45:52,013 [ scc.merge] INFO - PR 21 jburel 'Build'
2024-11-29 00:45:52,013 [ scc.merge] INFO
2024-11-29 00:45:52,013 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-29 00:45:52,013 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2024-11-29 00:45:52,013 [ scc.merge] INFO
2024-11-29 00:45:52,013 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2024-11-29 00:45:52,013 [ scc.merge] INFO Already up to date.
2024-11-29 00:45:52,013 [ scc.merge] INFO
2024-11-29 00:45:52,013 [ scc.merge] INFO Merged PRs:
2024-11-29 00:45:52,013 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-11-29 00:45:52,013 [ scc.merge] INFO
2024-11-29 00:45:52,013 [ scc.merge] INFO Repository: ome/omero-upload
2024-11-29 00:45:52,013 [ scc.merge] INFO Updating aca9e9c..100f6ae
2024-11-29 00:45:52,013 [ scc.merge] INFO Previously merged:
2024-11-29 00:45:52,013 [ scc.merge] INFO - PR 13 jburel 'Build'
2024-11-29 00:45:52,013 [ scc.merge] INFO
2024-11-29 00:45:52,013 [ scc.merge] INFO
2024-11-29 00:45:52,013 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2024-11-29 00:45:52,013 [ scc.merge] INFO Already up to date.
2024-11-29 00:45:52,013 [ scc.merge] INFO
2024-11-29 00:45:52,014 [ scc.merge] INFO Merged PRs:
2024-11-29 00:45:52,014 [ scc.merge] INFO - PR 20 jburel 'Build'
2024-11-29 00:45:52,014 [ scc.merge] INFO
2024-11-29 00:45:52,014 [ scc.merge] INFO Repository: ome/omero-web-zarr
2024-11-29 00:45:52,014 [ scc.merge] INFO Excluded PRs:
2024-11-29 00:45:52,014 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure)
2024-11-29 00:45:52,014 [ scc.merge] INFO - PR 17 jburel 'Build' (status: failure)
2024-11-29 00:45:52,014 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2024-11-29 00:45:52,014 [ scc.merge] INFO Already up to date.
2024-11-29 00:45:52,014 [ scc.merge] INFO
2024-11-29 00:45:52,014 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-29 00:45:52,014 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-11-29 00:45:52,014 [ scc.merge] INFO
2024-11-29 00:45:52,014 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2024-11-29 00:45:52,014 [ scc.merge] INFO Updating adfa132..70b01ed
2024-11-29 00:45:52,014 [ scc.merge] INFO Previously merged:
2024-11-29 00:45:52,014 [ scc.merge] INFO - PR 24 jburel 'Build'
2024-11-29 00:45:52,014 [ scc.merge] INFO
2024-11-29 00:45:52,014 [ scc.merge] INFO
2024-11-29 00:45:52,014 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2024-11-29 00:45:52,014 [ scc.merge] INFO Updating 8da48e1..5bfef29
2024-11-29 00:45:52,014 [ scc.merge] INFO Previously merged:
2024-11-29 00:45:52,014 [ scc.merge] INFO - PR 36 jburel 'Build'
2024-11-29 00:45:52,014 [ scc.merge] INFO
2024-11-29 00:45:52,014 [ scc.merge] INFO
2024-11-29 00:45:52,014 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2024-11-29 00:45:52,014 [ scc.merge] INFO Already up to date.
2024-11-29 00:45:52,014 [ scc.merge] INFO
2024-11-29 00:45:52,014 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-29 00:45:52,014 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2024-11-29 00:45:52,014 [ scc.merge] INFO
2024-11-29 00:45:52,014 [ scc.merge] INFO Repository: ome/scripts
2024-11-29 00:45:52,014 [ scc.merge] INFO Excluded PRs:
2024-11-29 00:45:52,014 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-11-29 00:45:52,014 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-11-29 00:45:52,015 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-11-29 00:45:52,015 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-11-29 00:45:52,015 [ scc.merge] INFO Already up to date.
2024-11-29 00:45:52,015 [ scc.merge] INFO
2024-11-29 00:45:52,015 [ scc.merge] INFO Merged PRs:
2024-11-29 00:45:52,015 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-11-29 00:45:52,015 [ scc.merge] INFO
2024-11-29 00:45:52,015 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-29 00:45:52,015 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-11-29 00:45:52,015 [ scc.merge] INFO
2024-11-29 00:45:52,015 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-11-29 00:45:52,015 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-11-29 00:45:52,021 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-11-29 00:45:52,027 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-11-29 00:45:52,033 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-11-29 00:45:52,039 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-11-29 00:45:52,048 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-11-29 00:45:52,053 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-11-29 00:45:52,058 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,063 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-11-29 00:45:52,063 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-11-29 00:45:52,067 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-11-29 00:45:52,073 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,077 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,077 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-11-29 00:45:52,077 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,082 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,082 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-11-29 00:45:52,082 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-11-29 00:45:52,087 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-11-29 00:45:52,092 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-11-29 00:45:52,096 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-11-29 00:45:52,101 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-11-29 00:45:52,106 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-11-29 00:45:52,111 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-11-29 00:45:52,116 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-11-29 00:45:52,121 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-11-29 00:45:52,126 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-29 00:45:52,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-11-29 00:45:52,130 [ scc.git] DEBUG Calling 'git remote'
2024-11-29 00:45:52,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.1-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD a02aa1b] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 027b3e6
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from c0517ed
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 9b73dd9
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 1c674373
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from e5b3ca3
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 2a621da
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from b4102d4
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 0a557da
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from fc20959
nothing to commit, working tree clean
Entering 'omero-parade'
HEAD detached from 5d441c2
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from 18bccb6
nothing to commit, working tree clean
Entering 'omero-rois'
HEAD detached from 5c752d5
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from c8610db
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from cda3ec6
nothing to commit, working tree clean
Entering 'omero-upload'
HEAD detached from aca9e9c
nothing to commit, working tree clean
Entering 'omero-virtual-microscope'
HEAD detached from deab817
nothing to commit, working tree clean
Entering 'omero-web-zarr'
HEAD detached from 67bb245
nothing to commit, working tree clean
Entering 'omero-weberror'
HEAD detached from adfa132
nothing to commit, working tree clean
Entering 'omero-webtest'
HEAD detached from 8da48e1
nothing to commit, working tree clean
Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
nothing to commit, working tree clean
Entering 'scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
[detached HEAD a110491] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-11-29 00:46:36,240 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-11-29 00:46:44,949 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-11-29 00:46:47,255 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-11-29 00:46:51,789 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-11-29 00:47:30,573 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
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