Skipping 224 KB..
Full Log2025-04-17 01:10:44,052 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:10:44,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:10:44,054 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-17 01:10:44,092 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-17 01:10:44,099 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcee2a1a690> has no local changes
2025-04-17 01:10:44,099 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Generated by OMERO-plugins-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/)'
2025-04-17 01:10:44,106 [ scc.git] DEBUG [detached HEAD 486c488] merge master -Dorg -Ssuccess-only
2025-04-17 01:10:44,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:10:44,106 [ scc.repo] DEBUG ## PRs found:
2025-04-17 01:10:44,264 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:44,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2025-04-17 01:10:44,802 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:45,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None
2025-04-17 01:10:45,279 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:45,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-04-17 01:10:45,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:46,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-17 01:10:46,368 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:46,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-04-17 01:10:46,899 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:47,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2
2025-04-17 01:10:47,070 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-04-17 01:10:47,321 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:47,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2025-04-17 01:10:47,808 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:48,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2025-04-17 01:10:48,363 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:48,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-04-17 01:10:48,867 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:49,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-17 01:10:49,350 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:49,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-04-17 01:10:49,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:50,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2025-04-17 01:10:50,048 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2025-04-17 01:10:50,048 [ scc.repo] DEBUG ## Branches found:
2025-04-17 01:10:50,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-04-17 01:10:50,049 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:10:50,049 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:10:50,051 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-17 01:10:50,054 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-17 01:10:50,054 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-17 01:10:50,057 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-17 01:10:50,060 [ scc.git] DEBUG Already up to date.
2025-04-17 01:10:50,060 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2025-04-17 01:10:50,371 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-04-17 01:10:50,371 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2025-04-17 01:10:50,375 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head'
2025-04-17 01:10:50,632 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-04-17 01:10:50,632 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD
2025-04-17 01:10:50,636 [ scc.git] DEBUG ## Unique users: []
2025-04-17 01:10:50,636 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:10:50,636 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:10:50,638 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-04-17 01:10:50,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:10:50,644 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-04-17 01:10:50,653 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-04-17 01:10:50,657 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2025-04-17 01:10:50,657 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2025-04-17 01:10:50,657 [ scc.git] DEBUG requirements.txt | 2 +-
2025-04-17 01:10:50,657 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2025-04-17 01:10:50,657 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2025-04-17 01:10:50,657 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2025-04-17 01:10:50,658 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:50,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:10:50,845 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-04-17 01:10:50,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:10:50,851 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-04-17 01:10:50,860 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-04-17 01:10:50,863 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-04-17 01:10:50,863 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-04-17 01:10:51,096 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:51,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:10:51,260 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-17 01:10:51,298 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:10:51,299 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:10:51,301 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-17 01:10:51,338 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-17 01:10:51,342 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcee293f790> has no local changes
2025-04-17 01:10:51,342 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/)'
2025-04-17 01:10:51,348 [ scc.git] DEBUG [detached HEAD b818011] merge master -Dorg -Ssuccess-only
2025-04-17 01:10:51,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:10:51,349 [ scc.repo] DEBUG ## PRs found:
2025-04-17 01:10:51,511 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:51,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2025-04-17 01:10:52,073 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:52,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2025-04-17 01:10:52,577 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:52,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2025-04-17 01:10:53,135 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:53,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-04-17 01:10:53,658 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:53,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-17 01:10:54,141 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:54,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-04-17 01:10:54,656 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:54,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2025-04-17 01:10:54,836 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-04-17 01:10:55,087 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:55,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2025-04-17 01:10:55,598 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:55,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2025-04-17 01:10:56,087 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:56,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-04-17 01:10:56,880 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:57,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-17 01:10:57,365 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:57,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-04-17 01:10:57,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:58,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2025-04-17 01:10:58,008 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-04-17 01:10:58,009 [ scc.repo] DEBUG ## Branches found:
2025-04-17 01:10:58,009 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-04-17 01:10:58,009 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:10:58,009 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:10:58,011 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-17 01:10:58,014 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-17 01:10:58,014 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-17 01:10:58,017 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-17 01:10:58,025 [ scc.git] DEBUG Updating 3cd120c..55060a2
2025-04-17 01:10:58,259 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:58,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None
2025-04-17 01:10:58,841 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2025-04-17 01:10:59,122 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-04-17 01:10:59,122 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2025-04-17 01:10:59,126 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2025-04-17 01:10:59,439 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-04-17 01:10:59,439 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2025-04-17 01:10:59,443 [ scc.git] DEBUG ## Unique users: []
2025-04-17 01:10:59,443 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:10:59,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:10:59,445 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-04-17 01:10:59,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:10:59,453 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-04-17 01:10:59,466 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2025-04-17 01:10:59,466 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2025-04-17 01:10:59,466 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-04-17 01:10:59,466 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-04-17 01:10:59,466 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-04-17 01:10:59,467 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-04-17 01:10:59,469 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-04-17 01:10:59,474 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-04-17 01:10:59,475 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:10:59,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:10:59,639 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-04-17 01:10:59,643 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501'
2025-04-17 01:10:59,646 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#391](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/cli.py
- src/omero_metadata/populate.py
--conflicts
2025-04-17 01:10:59,648 [ scc.config] DEBUG Found github.token
2025-04-17 01:10:59,648 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2025-04-17 01:10:59,648 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2025-04-17 01:10:59,653 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:10:59,655 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2025-04-17 01:10:59,670 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-04-17 01:10:59,670 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-04-17 01:10:59,670 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2025-04-17 01:10:59,670 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-04-17 01:10:59,670 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-04-17 01:10:59,673 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-04-17 01:10:59,678 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-04-17 01:10:59,890 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:00,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:11:00,070 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7'
2025-04-17 01:11:00,074 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501'
2025-04-17 01:11:00,077 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#391](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2025-04-17 01:11:00,079 [ scc.config] DEBUG Found github.token
2025-04-17 01:11:00,079 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2025-04-17 01:11:00,079 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-17 01:11:00,118 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:00,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:00,121 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-17 01:11:00,158 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-17 01:11:00,162 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcee29ee390> has no local changes
2025-04-17 01:11:00,162 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/)'
2025-04-17 01:11:00,169 [ scc.git] DEBUG [detached HEAD 2cefcb4] merge master -Dorg -Ssuccess-only
2025-04-17 01:11:00,169 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:11:00,169 [ scc.repo] DEBUG ## PRs found:
2025-04-17 01:11:00,321 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:00,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2025-04-17 01:11:00,925 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:01,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None
2025-04-17 01:11:01,440 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:01,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-04-17 01:11:01,963 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:02,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-17 01:11:02,446 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:02,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-04-17 01:11:02,954 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:03,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-04-17 01:11:03,441 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:03,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2
2025-04-17 01:11:03,627 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-04-17 01:11:03,878 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:04,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None
2025-04-17 01:11:04,125 [ scc.repo] DEBUG # ... Include label: dependencies
2025-04-17 01:11:04,376 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:04,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-04-17 01:11:04,958 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:05,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-17 01:11:05,483 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:05,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-04-17 01:11:06,041 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:06,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-04-17 01:11:06,611 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:06,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2
2025-04-17 01:11:06,794 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-04-17 01:11:07,045 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:07,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None
2025-04-17 01:11:07,277 [ scc.repo] DEBUG # ... Include label: dependencies
2025-04-17 01:11:07,528 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:07,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-04-17 01:11:08,102 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:08,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-17 01:11:08,636 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:08,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-04-17 01:11:09,157 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:09,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-04-17 01:11:09,713 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:09,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2
2025-04-17 01:11:09,900 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-04-17 01:11:10,151 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:10,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None
2025-04-17 01:11:10,677 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:10,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2025-04-17 01:11:11,162 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:11,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2025-04-17 01:11:11,662 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:11,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2025-04-17 01:11:12,146 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:12,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2025-04-17 01:11:12,694 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:12,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2025-04-17 01:11:13,175 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:13,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2025-04-17 01:11:13,476 [ scc.repo] DEBUG ## Branches found:
2025-04-17 01:11:13,476 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-04-17 01:11:13,476 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:13,476 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:13,479 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-17 01:11:13,481 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-17 01:11:13,481 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-17 01:11:13,484 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-17 01:11:13,487 [ scc.git] DEBUG Already up to date.
2025-04-17 01:11:13,487 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head'
2025-04-17 01:11:13,775 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-04-17 01:11:13,775 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD
2025-04-17 01:11:13,779 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head'
2025-04-17 01:11:14,058 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-04-17 01:11:14,058 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD
2025-04-17 01:11:14,062 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head'
2025-04-17 01:11:14,325 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-04-17 01:11:14,325 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD
2025-04-17 01:11:14,329 [ scc.git] DEBUG ## Unique users: []
2025-04-17 01:11:14,329 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:14,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:14,331 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0'
2025-04-17 01:11:14,334 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:14,336 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0'
2025-04-17 01:11:14,345 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-04-17 01:11:14,348 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++----------------------------
2025-04-17 01:11:14,348 [ scc.git] DEBUG package.json | 2 +-
2025-04-17 01:11:14,348 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-)
2025-04-17 01:11:14,349 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:14,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:11:14,509 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80'
2025-04-17 01:11:14,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:14,513 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80'
2025-04-17 01:11:14,524 [ scc.git] DEBUG Auto-merging package-lock.json
2025-04-17 01:11:14,524 [ scc.git] DEBUG Auto-merging package.json
2025-04-17 01:11:14,525 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-04-17 01:11:14,528 [ scc.git] DEBUG package-lock.json | 18 ++++++++++--------
2025-04-17 01:11:14,528 [ scc.git] DEBUG package.json | 2 +-
2025-04-17 01:11:14,528 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-)
2025-04-17 01:11:14,759 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:14,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:11:14,944 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-04-17 01:11:14,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:14,949 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-04-17 01:11:14,958 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-04-17 01:11:14,961 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-04-17 01:11:14,961 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-04-17 01:11:15,195 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:15,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:11:15,353 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-17 01:11:15,392 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:15,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:15,394 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-17 01:11:15,433 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-17 01:11:15,437 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcee002c9d0> has no local changes
2025-04-17 01:11:15,437 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/)'
2025-04-17 01:11:15,443 [ scc.git] DEBUG [detached HEAD a4d80d6] merge master -Dorg -Ssuccess-only
2025-04-17 01:11:15,444 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:11:15,444 [ scc.repo] DEBUG ## PRs found:
2025-04-17 01:11:15,604 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:15,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2
2025-04-17 01:11:15,793 [ scc.repo] DEBUG ## Branches found:
2025-04-17 01:11:15,793 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-04-17 01:11:15,793 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:15,793 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:15,795 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-17 01:11:15,797 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-17 01:11:15,797 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-17 01:11:15,800 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-17 01:11:15,803 [ scc.git] DEBUG Already up to date.
2025-04-17 01:11:15,803 [ scc.git] DEBUG ## Unique users: []
2025-04-17 01:11:15,803 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:15,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:15,805 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-17 01:11:15,844 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:15,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:15,846 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-17 01:11:15,883 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-17 01:11:15,886 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcee29ce810> has no local changes
2025-04-17 01:11:15,886 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Generated by OMERO-plugins-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/)'
2025-04-17 01:11:15,893 [ scc.git] DEBUG [detached HEAD de05737] merge master -Dorg -Ssuccess-only
2025-04-17 01:11:15,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:11:15,893 [ scc.repo] DEBUG ## PRs found:
2025-04-17 01:11:16,044 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:16,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2025-04-17 01:11:16,598 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:16,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None
2025-04-17 01:11:17,084 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:17,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None
2025-04-17 01:11:17,564 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:17,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None
2025-04-17 01:11:17,829 [ scc.repo] DEBUG ## Branches found:
2025-04-17 01:11:17,829 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-04-17 01:11:17,829 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:17,829 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:17,832 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-17 01:11:17,834 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-17 01:11:17,834 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-17 01:11:17,837 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-17 01:11:17,840 [ scc.git] DEBUG Already up to date.
2025-04-17 01:11:17,840 [ scc.git] DEBUG ## Unique users: []
2025-04-17 01:11:17,840 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:17,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:17,842 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-17 01:11:17,881 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:17,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:17,883 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-17 01:11:17,921 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-17 01:11:17,924 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcee00443d0> has no local changes
2025-04-17 01:11:17,924 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 33 jo-mueller 'Add roi to array functions' (user: jo-mueller)
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Generated by OMERO-plugins-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/)'
2025-04-17 01:11:17,930 [ scc.git] DEBUG [detached HEAD 58c3574] merge master -Dorg -Ssuccess-only
2025-04-17 01:11:17,931 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:11:17,931 [ scc.repo] DEBUG ## PRs found:
2025-04-17 01:11:18,080 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:18,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2025-04-17 01:11:18,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:18,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2025-04-17 01:11:19,157 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:19,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2025-04-17 01:11:19,622 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:19,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-04-17 01:11:20,190 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:20,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-17 01:11:20,700 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:21,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-04-17 01:11:21,307 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:21,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2025-04-17 01:11:21,496 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2025-04-17 01:11:21,496 [ scc.repo] DEBUG ## Branches found:
2025-04-17 01:11:21,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-04-17 01:11:21,496 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:21,496 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:21,498 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-17 01:11:21,501 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-17 01:11:21,501 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-17 01:11:21,503 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-17 01:11:21,506 [ scc.git] DEBUG Already up to date.
2025-04-17 01:11:21,506 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-04-17 01:11:21,778 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-04-17 01:11:21,778 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-04-17 01:11:21,782 [ scc.git] DEBUG ## Unique users: []
2025-04-17 01:11:21,782 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:21,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:21,785 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-04-17 01:11:21,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:21,790 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-04-17 01:11:21,799 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2025-04-17 01:11:21,799 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2025-04-17 01:11:21,799 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2025-04-17 01:11:21,799 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2025-04-17 01:11:21,799 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2025-04-17 01:11:21,799 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2025-04-17 01:11:21,799 [ scc.git] DEBUG Auto-merging setup.py
2025-04-17 01:11:21,799 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2025-04-17 01:11:21,799 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-04-17 01:11:21,799 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-04-17 01:11:21,802 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e'
2025-04-17 01:11:21,806 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build
2025-04-17 01:11:21,807 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:22,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:11:22,005 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-04-17 01:11:22,008 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e'
2025-04-17 01:11:22,011 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#391](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/consoleText) for more details.
Possible conflicts:
- Upstream changes
- setup.py
- omero_signup/urls.py
- omero_signup/views.py
- omero_signup/signup_settings.py
--conflicts
2025-04-17 01:11:22,013 [ scc.config] DEBUG Found github.token
2025-04-17 01:11:22,013 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2025-04-17 01:11:22,013 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-17 01:11:22,053 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:22,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:22,055 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-17 01:11:22,092 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-17 01:11:22,095 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcee005fe10> has no local changes
2025-04-17 01:11:22,095 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/)'
2025-04-17 01:11:22,101 [ scc.git] DEBUG [detached HEAD e5dc089] merge master -Dorg -Ssuccess-only
2025-04-17 01:11:22,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:11:22,102 [ scc.repo] DEBUG ## PRs found:
2025-04-17 01:11:22,255 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:22,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2025-04-17 01:11:22,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:23,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None
2025-04-17 01:11:23,298 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:23,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-04-17 01:11:23,862 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:24,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-17 01:11:24,339 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:24,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-04-17 01:11:24,833 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:25,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-04-17 01:11:25,294 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:25,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2
2025-04-17 01:11:25,473 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps'
2025-04-17 01:11:25,724 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:26,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None
2025-04-17 01:11:26,251 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:26,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None
2025-04-17 01:11:26,744 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:27,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None
2025-04-17 01:11:27,257 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:27,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-17 01:11:27,734 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:27,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-04-17 01:11:28,214 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:28,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None
2025-04-17 01:11:28,739 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:28,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None
2025-04-17 01:11:29,201 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:29,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2025-04-17 01:11:29,686 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:29,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2025-04-17 01:11:30,166 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:30,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-04-17 01:11:30,696 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:30,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-17 01:11:31,188 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:31,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-04-17 01:11:31,718 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:31,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2025-04-17 01:11:31,910 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-04-17 01:11:31,911 [ scc.repo] DEBUG ## Branches found:
2025-04-17 01:11:31,911 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-04-17 01:11:31,911 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:31,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:31,914 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-17 01:11:31,916 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-17 01:11:31,916 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-17 01:11:31,919 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-17 01:11:31,922 [ scc.git] DEBUG Already up to date.
2025-04-17 01:11:31,922 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2025-04-17 01:11:32,241 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-04-17 01:11:32,241 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2025-04-17 01:11:32,245 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head'
2025-04-17 01:11:32,652 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-04-17 01:11:32,652 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD
2025-04-17 01:11:32,655 [ scc.git] DEBUG ## Unique users: []
2025-04-17 01:11:32,655 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:32,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:32,657 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2025-04-17 01:11:32,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:32,665 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2025-04-17 01:11:32,677 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-04-17 01:11:32,681 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2025-04-17 01:11:32,681 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2025-04-17 01:11:32,681 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2025-04-17 01:11:32,681 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2025-04-17 01:11:32,681 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2025-04-17 01:11:32,681 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2025-04-17 01:11:32,681 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2025-04-17 01:11:32,681 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2025-04-17 01:11:32,681 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2025-04-17 01:11:32,682 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:32,682 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2025-04-17 01:11:32,682 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2025-04-17 01:11:32,683 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2025-04-17 01:11:32,683 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2025-04-17 01:11:32,683 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2025-04-17 01:11:32,683 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2025-04-17 01:11:32,683 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2025-04-17 01:11:32,683 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2025-04-17 01:11:32,683 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2025-04-17 01:11:32,683 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2025-04-17 01:11:32,683 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2025-04-17 01:11:32,683 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2025-04-17 01:11:32,683 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2025-04-17 01:11:32,683 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2025-04-17 01:11:32,683 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2025-04-17 01:11:32,684 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2025-04-17 01:11:32,684 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2025-04-17 01:11:32,684 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2025-04-17 01:11:32,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:11:32,849 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-04-17 01:11:32,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:32,856 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-04-17 01:11:32,866 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-04-17 01:11:32,869 [ scc.git] DEBUG docker | 1 +
2025-04-17 01:11:32,869 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2025-04-17 01:11:33,100 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:33,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:11:33,269 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-17 01:11:33,307 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:33,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:33,310 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-17 01:11:33,347 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-17 01:11:33,351 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcee29350d0> has no local changes
2025-04-17 01:11:33,351 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Generated by OMERO-plugins-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/)'
2025-04-17 01:11:33,357 [ scc.git] DEBUG [detached HEAD 364acd4] merge master -Dorg -Ssuccess-only
2025-04-17 01:11:33,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:11:33,358 [ scc.repo] DEBUG ## PRs found:
2025-04-17 01:11:33,520 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:33,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2025-04-17 01:11:33,704 [ scc.repo] DEBUG ## Branches found:
2025-04-17 01:11:33,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-04-17 01:11:33,704 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:33,704 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:33,706 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-17 01:11:33,709 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-17 01:11:33,709 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-17 01:11:33,712 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-17 01:11:33,714 [ scc.git] DEBUG Already up to date.
2025-04-17 01:11:33,714 [ scc.git] DEBUG ## Unique users: []
2025-04-17 01:11:33,714 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:33,715 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:33,717 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-17 01:11:33,755 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:33,755 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:33,757 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-17 01:11:33,795 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-17 01:11:33,799 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcee2a1a750> has no local changes
2025-04-17 01:11:33,799 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Generated by OMERO-plugins-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/)'
2025-04-17 01:11:33,805 [ scc.git] DEBUG [detached HEAD 343fe14] merge master -Dorg -Ssuccess-only
2025-04-17 01:11:33,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:11:33,805 [ scc.repo] DEBUG ## PRs found:
2025-04-17 01:11:33,955 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:34,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None
2025-04-17 01:11:34,506 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:34,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None
2025-04-17 01:11:34,994 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:35,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20/comments HTTP/1.1" 200 None
2025-04-17 01:11:35,459 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:35,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None
2025-04-17 01:11:35,996 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:36,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-17 01:11:36,479 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:36,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-04-17 01:11:36,965 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:37,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None
2025-04-17 01:11:37,425 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:37,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2
2025-04-17 01:11:37,599 [ scc.repo] DEBUG - PR 20 jburel 'Build'
2025-04-17 01:11:37,599 [ scc.repo] DEBUG ## Branches found:
2025-04-17 01:11:37,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-04-17 01:11:37,600 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:37,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:37,602 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-17 01:11:37,605 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-17 01:11:37,605 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-17 01:11:37,607 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-17 01:11:37,610 [ scc.git] DEBUG Already up to date.
2025-04-17 01:11:37,610 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head'
2025-04-17 01:11:37,902 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope
2025-04-17 01:11:37,902 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD
2025-04-17 01:11:37,906 [ scc.git] DEBUG ## Unique users: []
2025-04-17 01:11:37,906 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:37,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:37,908 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea'
2025-04-17 01:11:37,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:37,913 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea'
2025-04-17 01:11:37,921 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-04-17 01:11:37,924 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2025-04-17 01:11:37,924 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2025-04-17 01:11:37,924 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++
2025-04-17 01:11:37,924 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-)
2025-04-17 01:11:37,924 [ scc.git] DEBUG create mode 100755 .omeroci/app-build
2025-04-17 01:11:37,925 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:38,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:11:38,150 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-17 01:11:38,190 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:38,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:38,192 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-17 01:11:38,230 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-17 01:11:38,233 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcee0028850> has no local changes
2025-04-17 01:11:38,233 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Already up to date.
Merged PRs:
- PR 20 jburel 'Build'
Generated by OMERO-plugins-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/)'
2025-04-17 01:11:38,348 [ scc.git] DEBUG [detached HEAD c7268de] merge master -Dorg -Ssuccess-only
2025-04-17 01:11:38,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:11:38,349 [ scc.git] INFO Overriding base-branch from master to main
2025-04-17 01:11:38,349 [ scc.repo] DEBUG ## PRs found:
2025-04-17 01:11:38,401 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:38,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2025-04-17 01:11:38,952 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:39,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None
2025-04-17 01:11:39,467 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:39,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None
2025-04-17 01:11:39,956 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:40,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None
2025-04-17 01:11:40,470 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:40,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-17 01:11:40,980 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:41,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-04-17 01:11:41,486 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:41,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2025-04-17 01:11:42,000 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:42,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2025-04-17 01:11:42,484 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:42,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2025-04-17 01:11:42,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:43,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-04-17 01:11:43,504 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:43,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-17 01:11:43,987 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:44,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-04-17 01:11:44,497 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:44,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2025-04-17 01:11:44,675 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-04-17 01:11:44,675 [ scc.repo] DEBUG ## Branches found:
2025-04-17 01:11:44,675 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-04-17 01:11:44,675 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:44,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:44,678 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2025-04-17 01:11:44,680 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-17 01:11:44,680 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2025-04-17 01:11:44,683 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2025-04-17 01:11:44,686 [ scc.git] DEBUG Already up to date.
2025-04-17 01:11:44,686 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2025-04-17 01:11:45,001 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-04-17 01:11:45,001 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2025-04-17 01:11:45,005 [ scc.git] DEBUG ## Unique users: []
2025-04-17 01:11:45,005 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:45,005 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:45,007 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-04-17 01:11:45,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:45,013 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-04-17 01:11:45,020 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2025-04-17 01:11:45,020 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2025-04-17 01:11:45,021 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-04-17 01:11:45,021 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-04-17 01:11:45,024 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-04-17 01:11:45,028 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build
2025-04-17 01:11:45,029 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:45,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:11:45,189 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-04-17 01:11:45,191 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-04-17 01:11:45,194 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#391](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2025-04-17 01:11:45,196 [ scc.config] DEBUG Found github.token
2025-04-17 01:11:45,196 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2025-04-17 01:11:45,196 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-17 01:11:45,235 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:45,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:45,237 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-17 01:11:45,275 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-17 01:11:45,279 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcee2bc3650> has no local changes
2025-04-17 01:11:45,279 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/)'
2025-04-17 01:11:45,395 [ scc.git] DEBUG [detached HEAD fb7ffd4] merge master -Dorg -Ssuccess-only
2025-04-17 01:11:45,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:11:45,395 [ scc.repo] DEBUG ## PRs found:
2025-04-17 01:11:45,439 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:45,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2025-04-17 01:11:45,645 [ scc.repo] DEBUG ## Branches found:
2025-04-17 01:11:45,645 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-04-17 01:11:45,645 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:45,645 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:45,647 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-17 01:11:45,649 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-17 01:11:45,649 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-17 01:11:45,652 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-17 01:11:45,655 [ scc.git] DEBUG Already up to date.
2025-04-17 01:11:45,655 [ scc.git] DEBUG ## Unique users: []
2025-04-17 01:11:45,655 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:45,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:45,657 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-17 01:11:45,696 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:45,696 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:45,698 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-17 01:11:45,735 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-17 01:11:45,738 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcee0095450> has no local changes
2025-04-17 01:11:45,738 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Generated by OMERO-plugins-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/)'
2025-04-17 01:11:45,744 [ scc.git] DEBUG [detached HEAD 05eac89] merge master -Dorg -Ssuccess-only
2025-04-17 01:11:45,745 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:11:45,745 [ scc.repo] DEBUG ## PRs found:
2025-04-17 01:11:45,896 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:46,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2025-04-17 01:11:46,105 [ scc.repo] DEBUG ## Branches found:
2025-04-17 01:11:46,105 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-04-17 01:11:46,105 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:46,105 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:46,107 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-17 01:11:46,109 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-17 01:11:46,109 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-17 01:11:46,112 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-17 01:11:46,115 [ scc.git] DEBUG Already up to date.
2025-04-17 01:11:46,115 [ scc.git] DEBUG ## Unique users: []
2025-04-17 01:11:46,115 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:46,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:46,117 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-17 01:11:46,155 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:46,155 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:46,157 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-17 01:11:46,194 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-17 01:11:46,198 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcee2bf8bd0> has no local changes
2025-04-17 01:11:46,198 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Generated by OMERO-plugins-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/)'
2025-04-17 01:11:46,204 [ scc.git] DEBUG [detached HEAD 7b62e6c] merge master -Dorg -Ssuccess-only
2025-04-17 01:11:46,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:11:46,205 [ scc.repo] DEBUG ## PRs found:
2025-04-17 01:11:46,356 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:46,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2025-04-17 01:11:46,878 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:47,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2025-04-17 01:11:47,373 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:47,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2025-04-17 01:11:47,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:48,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-04-17 01:11:48,420 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:48,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-17 01:11:48,903 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:49,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-04-17 01:11:49,359 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:49,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2025-04-17 01:11:49,547 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2025-04-17 01:11:49,548 [ scc.repo] DEBUG ## Branches found:
2025-04-17 01:11:49,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-04-17 01:11:49,548 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:49,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:49,551 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-17 01:11:49,553 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-17 01:11:49,553 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-17 01:11:49,556 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-17 01:11:49,559 [ scc.git] DEBUG Already up to date.
2025-04-17 01:11:49,559 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2025-04-17 01:11:49,828 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2025-04-17 01:11:49,828 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2025-04-17 01:11:49,832 [ scc.git] DEBUG ## Unique users: []
2025-04-17 01:11:49,832 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:49,833 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:49,835 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-04-17 01:11:49,838 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:49,840 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-04-17 01:11:49,849 [ scc.git] DEBUG Auto-merging Dockerfile
2025-04-17 01:11:49,849 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2025-04-17 01:11:49,849 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-04-17 01:11:49,849 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-04-17 01:11:49,852 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-04-17 01:11:49,857 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-04-17 01:11:49,859 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:50,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:11:50,029 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-04-17 01:11:50,032 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-04-17 01:11:50,034 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#391](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2025-04-17 01:11:50,037 [ scc.config] DEBUG Found github.token
2025-04-17 01:11:50,037 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2025-04-17 01:11:50,037 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-17 01:11:50,076 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:50,076 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:50,078 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-17 01:11:50,116 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-17 01:11:50,120 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcee00cf350> has no local changes
2025-04-17 01:11:50,120 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/)'
2025-04-17 01:11:50,126 [ scc.git] DEBUG [detached HEAD 712a7cc] merge master -Dorg -Ssuccess-only
2025-04-17 01:11:50,127 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:11:50,127 [ scc.git] INFO Overriding base-branch from master to develop
2025-04-17 01:11:50,127 [ scc.repo] DEBUG ## PRs found:
2025-04-17 01:11:50,280 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:50,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-04-17 01:11:51,062 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:51,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-04-17 01:11:51,548 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:51,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-04-17 01:11:52,066 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:52,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-04-17 01:11:52,553 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:52,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-17 01:11:53,041 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:53,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-04-17 01:11:53,512 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:53,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-04-17 01:11:53,962 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:54,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-04-17 01:11:54,150 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-04-17 01:11:54,401 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:54,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-04-17 01:11:54,898 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:55,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-04-17 01:11:55,364 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:55,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-04-17 01:11:55,824 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:56,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-17 01:11:56,278 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:56,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-04-17 01:11:56,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:56,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-04-17 01:11:56,925 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-04-17 01:11:57,176 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:57,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-04-17 01:11:57,662 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:58,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-04-17 01:11:58,292 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:58,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-04-17 01:11:58,784 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:59,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-04-17 01:11:59,084 [ scc.repo] DEBUG ## Branches found:
2025-04-17 01:11:59,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-04-17 01:11:59,084 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:11:59,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:11:59,087 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-04-17 01:11:59,089 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-17 01:11:59,089 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-04-17 01:11:59,092 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-04-17 01:11:59,100 [ scc.git] DEBUG Updating 4b4c755..950b28b
2025-04-17 01:11:59,334 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:11:59,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None
2025-04-17 01:11:59,756 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-04-17 01:12:00,065 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-04-17 01:12:00,065 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-04-17 01:12:00,070 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-04-17 01:12:00,357 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-04-17 01:12:00,357 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-04-17 01:12:00,361 [ scc.git] DEBUG ## Unique users: []
2025-04-17 01:12:00,361 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:12:00,361 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:12:00,364 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-04-17 01:12:00,369 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:12:00,371 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-04-17 01:12:00,381 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-04-17 01:12:00,382 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-04-17 01:12:00,382 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-04-17 01:12:00,384 [ scc.git] DEBUG Calling 'git reset --hard 950b28b31e228ae7b317cbd159235faf4023e4dc'
2025-04-17 01:12:00,388 [ scc.git] DEBUG HEAD is now at 950b28b Merge pull request #225 from will-moore/test_fixes
2025-04-17 01:12:00,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:00,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:00,557 [ scc.git] DEBUG Calling 'git merge-base 950b28b31e228ae7b317cbd159235faf4023e4dc 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-04-17 01:12:00,562 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..950b28b31e228ae7b317cbd159235faf4023e4dc'
2025-04-17 01:12:00,566 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#391](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-04-17 01:12:00,568 [ scc.config] DEBUG Found github.token
2025-04-17 01:12:00,568 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-04-17 01:12:00,568 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-04-17 01:12:00,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:12:00,575 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-04-17 01:12:00,584 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-04-17 01:12:00,588 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-04-17 01:12:00,588 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-04-17 01:12:00,808 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:00,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:00,971 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-17 01:12:01,009 [ scc.git] DEBUG Get sha1 of %s
2025-04-17 01:12:01,009 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-17 01:12:01,011 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-17 01:12:01,049 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-17 01:12:01,052 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcee00cf6d0> has no local changes
2025-04-17 01:12:01,053 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..950b28b
Previously merged:
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/)'
2025-04-17 01:12:01,059 [ scc.git] DEBUG [detached HEAD 67c8d8f] merge master -Dorg -Ssuccess-only
2025-04-17 01:12:01,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:01,059 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-17 01:12:01,133 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2025-04-17 01:12:01,222 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:01,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:01,388 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2025-04-17 01:12:01,390 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2025-04-17 01:12:01,634 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:01,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:01,805 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2025-04-17 01:12:01,807 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2025-04-17 01:12:02,052 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:02,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:02,219 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2025-04-17 01:12:02,221 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2025-04-17 01:12:02,466 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:02,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:02,670 [ scc.config] DEBUG Found submodule.omero-figure.url
2025-04-17 01:12:02,914 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:03,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:03,081 [ scc.config] DEBUG Found submodule.omero-figure.branch
2025-04-17 01:12:03,083 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2025-04-17 01:12:03,327 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:03,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:03,502 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2025-04-17 01:12:03,503 [ scc.config] DEBUG Found submodule.omero-gallery.url
2025-04-17 01:12:03,747 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:03,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:03,912 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2025-04-17 01:12:03,914 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2025-04-17 01:12:04,159 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:04,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:04,329 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2025-04-17 01:12:04,330 [ scc.config] DEBUG Found submodule.omero-mapr.url
2025-04-17 01:12:04,575 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:04,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:04,761 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2025-04-17 01:12:04,763 [ scc.config] DEBUG Found submodule.omero-metadata.url
2025-04-17 01:12:05,007 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:05,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:05,172 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2025-04-17 01:12:05,174 [ scc.config] DEBUG Found submodule.omero-parade.url
2025-04-17 01:12:05,418 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:05,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:05,583 [ scc.config] DEBUG Found submodule.omero-parade.branch
2025-04-17 01:12:05,585 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2025-04-17 01:12:05,830 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:05,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:06,002 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2025-04-17 01:12:06,004 [ scc.config] DEBUG Found submodule.omero-rois.url
2025-04-17 01:12:06,248 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:06,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:06,413 [ scc.config] DEBUG Found submodule.omero-signup.url
2025-04-17 01:12:06,658 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:06,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:06,831 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2025-04-17 01:12:07,076 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:07,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:07,257 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2025-04-17 01:12:07,259 [ scc.config] DEBUG Found submodule.omero-upload.url
2025-04-17 01:12:07,504 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:07,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:07,677 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2025-04-17 01:12:07,922 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:08,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:08,089 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2025-04-17 01:12:08,335 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:08,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:08,504 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2025-04-17 01:12:08,506 [ scc.config] DEBUG Found submodule.omero-weberror.url
2025-04-17 01:12:08,751 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:08,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:08,916 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2025-04-17 01:12:08,918 [ scc.config] DEBUG Found submodule.omero-webtest.url
2025-04-17 01:12:09,163 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:09,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:09,340 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2025-04-17 01:12:09,342 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2025-04-17 01:12:09,587 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:09,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:09,752 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2025-04-17 01:12:09,754 [ scc.config] DEBUG Found submodule.scripts.url
2025-04-17 01:12:09,999 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-17 01:12:10,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-17 01:12:10,155 [ scc.config] DEBUG Found submodule.scripts.branch
2025-04-17 01:12:10,155 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-17 01:12:10,240 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcee397ef10> has local changes
2025-04-17 01:12:10,240 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 171 will-moore 'Initial addition of integration tests' (status: failure)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..7a2c812
Previously merged:
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 167 dominikl 'Add extinfo command'
Repository: ome/omero-figure
Excluded PRs:
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..4f0362e2
Previously merged:
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 612 will-moore 'Script version'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
Conflicting PRs (not included):
- PR 616 Rdornier 'Fix labels around border'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-prometheus-tools
Already up to date.
Repository: ome/omero-rois
Excluded PRs:
- PR 33 jo-mueller 'Add roi to array functions' (user: jo-mueller)
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Repository: ome/omero-upload
Already up to date.
Repository: ome/omero-virtual-microscope
Already up to date.
Merged PRs:
- PR 20 jburel 'Build'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Repository: openmicroscopy/omero-webtest
Already up to date.
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..950b28b
Previously merged:
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/391/)'
2025-04-17 01:12:10,253 [ scc.git] DEBUG [detached HEAD 92b45a2] merge master -Dorg -Ssuccess-only
2025-04-17 01:12:10,253 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2025-04-17 01:12:10,253 [ scc.merge] INFO Repository: ome/omero-plugins
2025-04-17 01:12:10,253 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,253 [ scc.merge] INFO
2025-04-17 01:12:10,253 [ scc.merge] INFO Merged PRs:
2025-04-17 01:12:10,253 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-04-17 01:12:10,253 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-04-17 01:12:10,253 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-04-17 01:12:10,253 [ scc.merge] INFO
2025-04-17 01:12:10,253 [ scc.merge] INFO Repository: ome/minimal-omero-client
2025-04-17 01:12:10,253 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,253 [ scc.merge] INFO
2025-04-17 01:12:10,253 [ scc.merge] INFO
2025-04-17 01:12:10,253 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2025-04-17 01:12:10,253 [ scc.merge] INFO Excluded PRs:
2025-04-17 01:12:10,253 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2025-04-17 01:12:10,253 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,253 [ scc.merge] INFO
2025-04-17 01:12:10,254 [ scc.merge] INFO
2025-04-17 01:12:10,254 [ scc.merge] INFO Repository: ome/omero-cli-render
2025-04-17 01:12:10,254 [ scc.merge] INFO Excluded PRs:
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2025-04-17 01:12:10,254 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,254 [ scc.merge] INFO
2025-04-17 01:12:10,254 [ scc.merge] INFO Merged PRs:
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands'
2025-04-17 01:12:10,254 [ scc.merge] INFO
2025-04-17 01:12:10,254 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2025-04-17 01:12:10,254 [ scc.merge] INFO Excluded PRs:
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' (status: failure)
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft)
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft)
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
2025-04-17 01:12:10,254 [ scc.merge] INFO Updating 11d3587..7a2c812
2025-04-17 01:12:10,254 [ scc.merge] INFO Previously merged:
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-04-17 01:12:10,254 [ scc.merge] INFO
2025-04-17 01:12:10,254 [ scc.merge] INFO Merged PRs:
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2025-04-17 01:12:10,254 [ scc.merge] INFO
2025-04-17 01:12:10,254 [ scc.merge] INFO Conflicting PRs (not included):
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command'
2025-04-17 01:12:10,254 [ scc.merge] INFO
2025-04-17 01:12:10,254 [ scc.merge] INFO Repository: ome/omero-figure
2025-04-17 01:12:10,254 [ scc.merge] INFO Excluded PRs:
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft)
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2025-04-17 01:12:10,254 [ scc.merge] INFO Updating 9cc36cde..4f0362e2
2025-04-17 01:12:10,254 [ scc.merge] INFO Previously merged:
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-04-17 01:12:10,254 [ scc.merge] INFO
2025-04-17 01:12:10,254 [ scc.merge] INFO Merged PRs:
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois'
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature'
2025-04-17 01:12:10,254 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst'
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 612 will-moore 'Script version'
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite'
2025-04-17 01:12:10,255 [ scc.merge] INFO
2025-04-17 01:12:10,255 [ scc.merge] INFO Conflicting PRs (not included):
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border'
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2025-04-17 01:12:10,255 [ scc.merge] INFO
2025-04-17 01:12:10,255 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2025-04-17 01:12:10,255 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,255 [ scc.merge] INFO
2025-04-17 01:12:10,255 [ scc.merge] INFO Merged PRs:
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2025-04-17 01:12:10,255 [ scc.merge] INFO
2025-04-17 01:12:10,255 [ scc.merge] INFO Repository: ome/omero-gallery
2025-04-17 01:12:10,255 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,255 [ scc.merge] INFO
2025-04-17 01:12:10,255 [ scc.merge] INFO Merged PRs:
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-04-17 01:12:10,255 [ scc.merge] INFO
2025-04-17 01:12:10,255 [ scc.merge] INFO Conflicting PRs (not included):
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-04-17 01:12:10,255 [ scc.merge] INFO
2025-04-17 01:12:10,255 [ scc.merge] INFO Repository: ome/omero-iviewer
2025-04-17 01:12:10,255 [ scc.merge] INFO Excluded PRs:
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure)
2025-04-17 01:12:10,255 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,255 [ scc.merge] INFO
2025-04-17 01:12:10,255 [ scc.merge] INFO Merged PRs:
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2025-04-17 01:12:10,255 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2025-04-17 01:12:10,256 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2025-04-17 01:12:10,256 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-04-17 01:12:10,256 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-04-17 01:12:10,256 [ scc.merge] INFO
2025-04-17 01:12:10,256 [ scc.merge] INFO Conflicting PRs (not included):
2025-04-17 01:12:10,256 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-04-17 01:12:10,256 [ scc.merge] INFO
2025-04-17 01:12:10,256 [ scc.merge] INFO Repository: ome/omero-mapr
2025-04-17 01:12:10,256 [ scc.merge] INFO Excluded PRs:
2025-04-17 01:12:10,256 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2025-04-17 01:12:10,256 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,256 [ scc.merge] INFO
2025-04-17 01:12:10,256 [ scc.merge] INFO Merged PRs:
2025-04-17 01:12:10,256 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2025-04-17 01:12:10,256 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-04-17 01:12:10,256 [ scc.merge] INFO
2025-04-17 01:12:10,256 [ scc.merge] INFO Repository: ome/omero-metadata
2025-04-17 01:12:10,256 [ scc.merge] INFO Updating 3cd120c..55060a2
2025-04-17 01:12:10,256 [ scc.merge] INFO Previously merged:
2025-04-17 01:12:10,256 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-04-17 01:12:10,256 [ scc.merge] INFO
2025-04-17 01:12:10,256 [ scc.merge] INFO Conflicting PRs (not included):
2025-04-17 01:12:10,256 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-04-17 01:12:10,256 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-04-17 01:12:10,256 [ scc.merge] INFO
2025-04-17 01:12:10,256 [ scc.merge] INFO Repository: ome/omero-parade
2025-04-17 01:12:10,256 [ scc.merge] INFO Excluded PRs:
2025-04-17 01:12:10,256 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
2025-04-17 01:12:10,256 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2025-04-17 01:12:10,256 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2025-04-17 01:12:10,256 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2025-04-17 01:12:10,256 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,256 [ scc.merge] INFO
2025-04-17 01:12:10,256 [ scc.merge] INFO Merged PRs:
2025-04-17 01:12:10,256 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-04-17 01:12:10,256 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-04-17 01:12:10,256 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-04-17 01:12:10,256 [ scc.merge] INFO
2025-04-17 01:12:10,256 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2025-04-17 01:12:10,256 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,256 [ scc.merge] INFO
2025-04-17 01:12:10,257 [ scc.merge] INFO
2025-04-17 01:12:10,257 [ scc.merge] INFO Repository: ome/omero-rois
2025-04-17 01:12:10,257 [ scc.merge] INFO Excluded PRs:
2025-04-17 01:12:10,257 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' (user: jo-mueller)
2025-04-17 01:12:10,257 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-04-17 01:12:10,257 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,257 [ scc.merge] INFO
2025-04-17 01:12:10,257 [ scc.merge] INFO
2025-04-17 01:12:10,257 [ scc.merge] INFO Repository: ome/omero-signup
2025-04-17 01:12:10,257 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,257 [ scc.merge] INFO
2025-04-17 01:12:10,257 [ scc.merge] INFO Conflicting PRs (not included):
2025-04-17 01:12:10,257 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2025-04-17 01:12:10,257 [ scc.merge] INFO
2025-04-17 01:12:10,257 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2025-04-17 01:12:10,257 [ scc.merge] INFO Excluded PRs:
2025-04-17 01:12:10,257 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles)
2025-04-17 01:12:10,257 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
2025-04-17 01:12:10,257 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
2025-04-17 01:12:10,257 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,257 [ scc.merge] INFO
2025-04-17 01:12:10,257 [ scc.merge] INFO Merged PRs:
2025-04-17 01:12:10,257 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-04-17 01:12:10,257 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps'
2025-04-17 01:12:10,257 [ scc.merge] INFO
2025-04-17 01:12:10,257 [ scc.merge] INFO Repository: ome/omero-upload
2025-04-17 01:12:10,257 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,257 [ scc.merge] INFO
2025-04-17 01:12:10,257 [ scc.merge] INFO
2025-04-17 01:12:10,257 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2025-04-17 01:12:10,257 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,257 [ scc.merge] INFO
2025-04-17 01:12:10,257 [ scc.merge] INFO Merged PRs:
2025-04-17 01:12:10,257 [ scc.merge] INFO - PR 20 jburel 'Build'
2025-04-17 01:12:10,257 [ scc.merge] INFO
2025-04-17 01:12:10,257 [ scc.merge] INFO Repository: ome/omero-web-zarr
2025-04-17 01:12:10,257 [ scc.merge] INFO Excluded PRs:
2025-04-17 01:12:10,257 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure)
2025-04-17 01:12:10,257 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2025-04-17 01:12:10,257 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,257 [ scc.merge] INFO
2025-04-17 01:12:10,257 [ scc.merge] INFO Conflicting PRs (not included):
2025-04-17 01:12:10,258 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-04-17 01:12:10,258 [ scc.merge] INFO
2025-04-17 01:12:10,258 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2025-04-17 01:12:10,258 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,258 [ scc.merge] INFO
2025-04-17 01:12:10,258 [ scc.merge] INFO
2025-04-17 01:12:10,258 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2025-04-17 01:12:10,258 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,258 [ scc.merge] INFO
2025-04-17 01:12:10,258 [ scc.merge] INFO
2025-04-17 01:12:10,258 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2025-04-17 01:12:10,258 [ scc.merge] INFO Already up to date.
2025-04-17 01:12:10,258 [ scc.merge] INFO
2025-04-17 01:12:10,258 [ scc.merge] INFO Conflicting PRs (not included):
2025-04-17 01:12:10,258 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2025-04-17 01:12:10,258 [ scc.merge] INFO
2025-04-17 01:12:10,258 [ scc.merge] INFO Repository: ome/scripts
2025-04-17 01:12:10,258 [ scc.merge] INFO Excluded PRs:
2025-04-17 01:12:10,258 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-04-17 01:12:10,258 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-04-17 01:12:10,258 [ scc.merge] INFO Updating 4b4c755..950b28b
2025-04-17 01:12:10,258 [ scc.merge] INFO Previously merged:
2025-04-17 01:12:10,258 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests'
2025-04-17 01:12:10,258 [ scc.merge] INFO
2025-04-17 01:12:10,258 [ scc.merge] INFO Merged PRs:
2025-04-17 01:12:10,258 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-04-17 01:12:10,258 [ scc.merge] INFO
2025-04-17 01:12:10,258 [ scc.merge] INFO Conflicting PRs (not included):
2025-04-17 01:12:10,258 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-04-17 01:12:10,258 [ scc.merge] INFO
2025-04-17 01:12:10,258 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-04-17 01:12:10,258 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,260 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-04-17 01:12:10,260 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-04-17 01:12:10,262 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-04-17 01:12:10,265 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-04-17 01:12:10,267 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,269 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,269 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-04-17 01:12:10,269 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-04-17 01:12:10,271 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-04-17 01:12:10,273 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-04-17 01:12:10,275 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-04-17 01:12:10,277 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-04-17 01:12:10,280 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-04-17 01:12:10,282 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-04-17 01:12:10,284 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,286 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,286 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-04-17 01:12:10,286 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-04-17 01:12:10,288 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-04-17 01:12:10,290 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-04-17 01:12:10,292 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,294 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,294 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-04-17 01:12:10,294 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-04-17 01:12:10,296 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-04-17 01:12:10,299 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-04-17 01:12:10,301 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,303 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,303 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-04-17 01:12:10,303 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,305 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-17 01:12:10,305 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-04-17 01:12:10,305 [ scc.git] DEBUG Calling 'git remote'
2025-04-17 01:12:10,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.3-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 7b34378] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 4777ef8
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from ce6e13c
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 11d3587
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 9cc36cde
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from 3b6c05a
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 2a621da
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from 7a798ce
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 0a557da
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from 3cd120c
nothing to commit, working tree clean
Entering 'omero-parade'
HEAD detached from fb5ae86
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from eb47378
nothing to commit, working tree clean
Entering 'omero-rois'
HEAD detached from bdfeb5e
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from be76813
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from cda3ec6
nothing to commit, working tree clean
Entering 'omero-upload'
HEAD detached from 100f6ae
nothing to commit, working tree clean
Entering 'omero-virtual-microscope'
HEAD detached from deab817
nothing to commit, working tree clean
Entering 'omero-web-zarr'
HEAD detached from 8f3c313
nothing to commit, working tree clean
Entering 'omero-weberror'
HEAD detached from 70b01ed
nothing to commit, working tree clean
Entering 'omero-webtest'
HEAD detached from 5bfef29
nothing to commit, working tree clean
Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
nothing to commit, working tree clean
Entering 'scripts'
HEAD detached from 4b4c755
nothing to commit, working tree clean
[detached HEAD fc022af] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-04-17 01:12:57,677 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-04-17 01:13:07,076 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-04-17 01:13:09,612 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-04-17 01:13:14,556 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-04-17 01:13:54,341 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts (hide)
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS
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