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Started by upstream project "Trigger" build number 609 originally caused by: Started by timer Running as SYSTEM Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/BIOFORMATS-push The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /home/omero/workspace/BIOFORMATS-push/bio-formats-build/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/bio-formats-build # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -ffdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 Fetching upstream changes from https://github.com/ome/bio-formats-build > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/bio-formats-build +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse origin/master^{commit} # timeout=10 Checking out Revision 909e999ce879325a2ed6211dfa6e509de53f2d4e (origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f 909e999ce879325a2ed6211dfa6e509de53f2d4e # timeout=10 Commit message: "Merge pull request #730 from ome/dependabot/submodules/bioformats-3f70394" > git rev-list --no-walk 909e999ce879325a2ed6211dfa6e509de53f2d4e # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.ome-common-java.url # timeout=10 > git config -f .gitmodules --get submodule.ome-common-java.path # timeout=10 > git config --get submodule.ome-model.url # timeout=10 > git config -f .gitmodules --get submodule.ome-model.path # timeout=10 > git config --get submodule.ome-poi.url # timeout=10 > git config -f .gitmodules --get submodule.ome-poi.path # timeout=10 > git config --get submodule.ome-mdbtools.url # timeout=10 > git config -f .gitmodules --get submodule.ome-mdbtools.path # timeout=10 > git config --get submodule.ome-jai.url # timeout=10 > git config -f .gitmodules --get submodule.ome-jai.path # timeout=10 > git config --get submodule.ome-codecs.url # timeout=10 > git config -f .gitmodules --get submodule.ome-codecs.path # timeout=10 > git config --get submodule.ome-metakit.url # timeout=10 > git config -f .gitmodules --get submodule.ome-metakit.path # timeout=10 > git config --get submodule.ome-stubs.url # timeout=10 > git config -f .gitmodules --get submodule.ome-stubs.path # timeout=10 > git config --get submodule.bioformats.url # timeout=10 > git config -f .gitmodules --get submodule.bioformats.path # timeout=10 > git config --get submodule.bio-formats-documentation.url # timeout=10 > git config -f .gitmodules --get submodule.bio-formats-documentation.path # timeout=10 > git config --get submodule.bio-formats-examples.url # timeout=10 > git config -f .gitmodules --get submodule.bio-formats-examples.path # timeout=10 > git config --get submodule.ZarrReader.url # timeout=10 > git config -f .gitmodules --get submodule.ZarrReader.path # timeout=10 > git submodule update --init --recursive --remote ome-common-java # timeout=10 > git submodule update --init --recursive --remote ome-model # timeout=10 > git submodule update --init --recursive --remote ome-poi # timeout=10 > git submodule update --init --recursive --remote ome-mdbtools # timeout=10 > git submodule update --init --recursive --remote ome-jai # timeout=10 > git submodule update --init --recursive --remote ome-codecs # timeout=10 > git submodule update --init --recursive --remote ome-metakit # timeout=10 > git submodule update --init --recursive --remote ome-stubs # timeout=10 > git submodule update --init --recursive --remote bioformats # timeout=10 > git submodule update --init --recursive --remote bio-formats-documentation # timeout=10 > git submodule update --init --recursive --remote bio-formats-examples # timeout=10 > git submodule update --init --recursive --remote ZarrReader # timeout=10 [BIOFORMATS-push] $ /bin/bash -xe /tmp/jenkins5780586985045201708.sh + python3.11 -mvenv venv + source /home/omero/workspace/BIOFORMATS-push/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/BIOFORMATS-push/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/BIOFORMATS-push/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + pip install -U pip Requirement already satisfied: pip in ./venv/lib64/python3.11/site-packages (25.2) + pip install -U scc Requirement already satisfied: scc in ./venv/lib64/python3.11/site-packages (0.20.0) Requirement already satisfied: PyGithub>=1.54 in ./venv/lib64/python3.11/site-packages (from scc) (2.6.1) Requirement already satisfied: PyYAML>=5.1 in ./venv/lib64/python3.11/site-packages (from scc) (6.0.2) Requirement already satisfied: future in ./venv/lib64/python3.11/site-packages (from scc) (1.0.0) Requirement already satisfied: ruamel.yaml in ./venv/lib64/python3.11/site-packages (from scc) (0.18.10) Requirement already satisfied: ruamel.yaml.jinja2 in ./venv/lib64/python3.11/site-packages (from scc) (0.2.7) Requirement already satisfied: six in ./venv/lib64/python3.11/site-packages (from scc) (1.17.0) Requirement already satisfied: urllib3<2 in ./venv/lib64/python3.11/site-packages (from scc) (1.26.20) Requirement already satisfied: yaclifw<0.3,>=0.2.0 in ./venv/lib64/python3.11/site-packages (from scc) (0.2.0) Requirement already satisfied: pynacl>=1.4.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (1.5.0) Requirement already satisfied: requests>=2.14.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (2.32.3) Requirement already satisfied: pyjwt>=2.4.0 in ./venv/lib64/python3.11/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.10.1) Requirement already satisfied: typing-extensions>=4.0.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (4.13.0) Requirement already satisfied: Deprecated in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (1.2.18) Requirement already satisfied: cryptography>=3.4.0 in ./venv/lib64/python3.11/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (44.0.2) Requirement already satisfied: cffi>=1.12 in ./venv/lib64/python3.11/site-packages (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (1.17.1) Requirement already satisfied: pycparser in ./venv/lib64/python3.11/site-packages (from cffi>=1.12->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.22) Requirement already satisfied: charset-normalizer<4,>=2 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.4.1) Requirement already satisfied: idna<4,>=2.5 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.10) Requirement already satisfied: certifi>=2017.4.17 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (2025.1.31) Requirement already satisfied: wrapt<2,>=1.10 in ./venv/lib64/python3.11/site-packages (from Deprecated->PyGithub>=1.54->scc) (1.17.2) Requirement already satisfied: ruamel.yaml.clib>=0.2.7 in ./venv/lib64/python3.11/site-packages (from ruamel.yaml->scc) (0.2.12) + PATH=/home/omero/workspace/BIOFORMATS-push/bio-formats-build/scripts:/home/omero/workspace/BIOFORMATS-push/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin + MERGE_OPTIONS='--no-ask --reset --comment -S success-only' + cd bio-formats-build + echo 'Merge base repository (no submodule updates)' Merge base repository (no submodule updates) + scc merge --no-ask --reset --comment -S success-only --shallow master 2025-09-05 00:01:25,578 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-09-05 00:01:25,579 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-09-05 00:01:25,579 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-09-05 00:01:25,579 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-09-05 00:01:25,579 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-09-05 00:01:25,579 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-09-05 00:01:26,005 [ scc.merge] INFO Repository: ome/bio-formats-build 2025-09-05 00:01:26,005 [ scc.merge] INFO Already up to date. 2025-09-05 00:01:26,005 [ scc.merge] INFO 2025-09-05 00:01:26,005 [ scc.merge] INFO + git submodule sync Synchronizing submodule url for 'ZarrReader' Synchronizing submodule url for 'bio-formats-documentation' Synchronizing submodule url for 'bio-formats-examples' Synchronizing submodule url for 'bioformats' Synchronizing submodule url for 'ome-codecs' Synchronizing submodule url for 'ome-common-java' Synchronizing submodule url for 'ome-jai' Synchronizing submodule url for 'ome-mdbtools' Synchronizing submodule url for 'ome-metakit' Synchronizing submodule url for 'ome-model' Synchronizing submodule url for 'ome-poi' Synchronizing submodule url for 'ome-stubs' + git submodule update --remote --recursive Submodule path 'bio-formats-documentation': checked out 'cb4767b85a5baafa8e58fdb7269eac649c1564d3' Submodule path 'bio-formats-examples': checked out 'b6449b11870d7d0c02c82c53dc3c9c52f1360344' Submodule path 'bioformats': checked out '36719615590bc759084c872adbf521e48ee1cfc1' Submodule path 'ome-codecs': checked out 'a105f944171d0ce3be952d2e3558b1f417c3c30e' Submodule path 'ome-common-java': checked out '5fd163e5c069af5e2be725c4d9633b7f9e07fa3b' Submodule path 'ome-jai': checked out '9f1b4efff4c048da02bc6634ed3325cb38b41f0f' Submodule path 'ome-mdbtools': checked out '9c3c3e268e1e76dd602daa88788403073b532e24' Submodule path 'ome-metakit': checked out '8a3c6a1cd729108066c5b16df971632846fc3cac' Submodule path 'ome-model': checked out 'a3fb3465790b50398b69518a18c7f24bb5ebc829' Submodule path 'ome-poi': checked out '2df7a4ffd4736de8ad63161c3d816fae722a8b35' Submodule path 'ome-stubs': checked out '6a87342b85e0539247e64f53045ea776c90a269b' + echo 'Merge all submodules using repository configuration:' Merge all submodules using repository configuration: + cat scripts/repositories.yml base-branch: master submodules: ome-common-java: base-branch: master bioformats: base-branch: develop bio-formats-documentation: base-branch: master bio-formats-examples: base-branch: master ome-codecs: base-branch: master ome-common-java: base-branch: master ome-jai: base-branch: master ome-mdbtools: base-branch: master ome-metakit: base-branch: master ome-model: base-branch: master ome-poi: base-branch: master ome-stubs: base-branch: master ZarrReader: base-branch: main ++ pwd + scc merge --repository-config=/home/omero/workspace/BIOFORMATS-push/bio-formats-build/scripts/repositories.yml --no-ask --reset --comment -S success-only --update-gitmodules --push merge_ci master Following Github server redirection from /repos/openmicroscopy/bioformats to /repositories/2510503 2025-09-05 00:01:41,503 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/bioformats to /repositories/2510503 2025-09-05 00:02:03,437 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-09-05 00:02:03,437 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-09-05 00:02:03,438 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-09-05 00:02:03,438 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-09-05 00:02:03,438 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-09-05 00:02:03,438 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-09-05 00:02:03,760 [ scc.git] INFO Overriding base-branch from master to main 2025-09-05 00:02:25,940 [ scc.git] INFO Overriding base-branch from master to develop 2025-09-05 00:02:45,068 [urllib3.conn] WARNI Retrying (GithubRetry(total=9, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f5da01764d0>: Failed to establish a new connection: [Errno -2] Name or service not known')': /repos/ome/bioformats/issues/4254/comments 2025-09-05 00:02:45,069 [urllib3.conn] WARNI Retrying (GithubRetry(total=8, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f5da23f6a50>: Failed to establish a new connection: [Errno -2] Name or service not known')': /repos/ome/bioformats/issues/4254/comments 2025-09-05 00:02:45,070 [urllib3.conn] WARNI Retrying (GithubRetry(total=7, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f5da016fb90>: Failed to establish a new connection: [Errno -2] Name or service not known')': /repos/ome/bioformats/issues/4254/comments 2025-09-05 00:02:45,070 [urllib3.conn] WARNI Retrying (GithubRetry(total=6, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f5da016ed10>: Failed to establish a new connection: [Errno -2] Name or service not known')': /repos/ome/bioformats/issues/4254/comments 2025-09-05 00:02:45,071 [urllib3.conn] WARNI Retrying (GithubRetry(total=5, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f5da016e4d0>: Failed to establish a new connection: [Errno -2] Name or service not known')': /repos/ome/bioformats/issues/4254/comments 2025-09-05 00:02:45,071 [urllib3.conn] WARNI Retrying (GithubRetry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f5da016dd10>: Failed to establish a new connection: [Errno -2] Name or service not known')': /repos/ome/bioformats/issues/4254/comments 2025-09-05 00:02:45,072 [urllib3.conn] WARNI Retrying (GithubRetry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f5da016d2d0>: Failed to establish a new connection: [Errno -2] Name or service not known')': /repos/ome/bioformats/issues/4254/comments 2025-09-05 00:02:45,073 [urllib3.conn] WARNI Retrying (GithubRetry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f5da016c910>: Failed to establish a new connection: [Errno -2] Name or service not known')': /repos/ome/bioformats/issues/4254/comments 2025-09-05 00:02:45,073 [urllib3.conn] WARNI Retrying (GithubRetry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f5da016fed0>: Failed to establish a new connection: [Errno -2] Name or service not known')': /repos/ome/bioformats/issues/4254/comments 2025-09-05 00:02:45,074 [urllib3.conn] WARNI Retrying (GithubRetry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f5da016bd90>: Failed to establish a new connection: [Errno -2] Name or service not known')': /repos/ome/bioformats/issues/4254/comments Traceback (most recent call last): File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/urllib3/connection.py", line 174, in _new_conn conn = connection.create_connection( ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/urllib3/util/connection.py", line 72, in create_connection for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM): ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/socket.py", line 962, in getaddrinfo for res in _socket.getaddrinfo(host, port, family, type, proto, flags): ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ socket.gaierror: [Errno -2] Name or service not known During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/urllib3/connectionpool.py", line 716, in urlopen httplib_response = self._make_request( ^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/urllib3/connectionpool.py", line 404, in _make_request self._validate_conn(conn) File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/urllib3/connectionpool.py", line 1061, in _validate_conn conn.connect() File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/urllib3/connection.py", line 363, in connect self.sock = conn = self._new_conn() ^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/urllib3/connection.py", line 186, in _new_conn raise NewConnectionError( urllib3.exceptions.NewConnectionError: <urllib3.connection.HTTPSConnection object at 0x7f5da0168d90>: Failed to establish a new connection: [Errno -2] Name or service not known During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/requests/adapters.py", line 667, in send resp = conn.urlopen( ^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/urllib3/connectionpool.py", line 830, in urlopen return self.urlopen( ^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/urllib3/connectionpool.py", line 830, in urlopen return self.urlopen( ^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/urllib3/connectionpool.py", line 830, in urlopen return self.urlopen( ^^^^^^^^^^^^^ [Previous line repeated 7 more times] File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/urllib3/connectionpool.py", line 802, in urlopen retries = retries.increment( ^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/github/GithubRetry.py", line 205, in increment return super().increment(method, url, response, error, _pool, _stacktrace) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/urllib3/util/retry.py", line 594, in increment raise MaxRetryError(_pool, url, error or ResponseError(cause)) urllib3.exceptions.MaxRetryError: HTTPSConnectionPool(host='api.github.com', port=443): Max retries exceeded with url: /repos/ome/bioformats/issues/4254/comments (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f5da0168d90>: Failed to establish a new connection: [Errno -2] Name or service not known')) During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/scc/main.py", line 64, in entry_point main("scc", items=[ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/yaclifw/framework.py", line 188, in main ns.func(ns) File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/scc/git.py", line 3332, in __call__ self.merge(args, self.main_repo) File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/scc/git.py", line 3357, in merge updated, merge_msg = main_repo.rmerge( ^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/scc/git.py", line 1851, in rmerge submodule_updated, submodule_msg = submodule_repo.rmerge( ^^^^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/scc/git.py", line 1822, in rmerge merge_msg += self.origin.find_candidate_pulls(filters) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/scc/git.py", line 930, in find_candidate_pulls include, exclude_reason = self.filter_pull(pullrequest, filters) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/scc/git.py", line 957, in filter_pull if pullrequest.parse(filters["exclude"].get("label"), ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/scc/git.py", line 559, in parse found_comments = self.parse_comments(argument, ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/scc/git.py", line 590, in parse_comments for comment in self.get_comments(whitelist=whitelist): ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/scc/git.py", line 126, in wrapper error = check_exception_message(e) ^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/scc/git.py", line 115, in wrapper return func(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/scc/git.py", line 720, in get_comments return [comment.body for comment in self.issue_comments ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/scc/git.py", line 720, in <listcomp> return [comment.body for comment in self.issue_comments ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/github/PaginatedList.py", line 84, in __iter__ newElements = self._grow() ^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/github/PaginatedList.py", line 95, in _grow newElements = self._fetchNextPage() ^^^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/github/PaginatedList.py", line 320, in _fetchNextPage headers, data = self.__requester.requestJsonAndCheck( ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/github/Requester.py", line 625, in requestJsonAndCheck *self.requestJson( ^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/github/Requester.py", line 959, in requestJson status, responseHeaders, output = self.__requestEncode( ^^^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/github/Requester.py", line 1098, in __requestEncode status, responseHeaders, output = self.__requestRaw( ^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/github/Requester.py", line 1136, in __requestRaw response = cnx.getresponse() ^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/github/Requester.py", line 214, in getresponse r = verb( ^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/requests/sessions.py", line 602, in get return self.request("GET", url, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/requests/sessions.py", line 589, in request resp = self.send(prep, **send_kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/requests/sessions.py", line 703, in send r = adapter.send(request, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/omero/workspace/BIOFORMATS-push/venv/lib64/python3.11/site-packages/requests/adapters.py", line 700, in send raise ConnectionError(e, request=request) requests.exceptions.ConnectionError: HTTPSConnectionPool(host='api.github.com', port=443): Max retries exceeded with url: /repos/ome/bioformats/issues/4254/comments (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f5da0168d90>: Failed to establish a new connection: [Errno -2] Name or service not known')) Build step 'Execute shell' marked build as failure Archiving artifacts Finished: FAILURE