08:38:11Started by upstream project "Trigger" build number 64708:38:11originally caused by:
08:38:11 Started by user devspace08:38:11Running as SYSTEM
08:38:11Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-push
08:38:11The recommended git tool is: NONE
08:38:11No credentials specified
08:38:11 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-push/src/.git # timeout=10
08:38:11Fetching changes from the remote Git repository
08:38:11 > git config remote.origin.url https://github.com/ome/openmicroscopy.git # timeout=10
08:38:11Fetching upstream changes from https://github.com/ome/openmicroscopy.git08:38:11 > git --version # timeout=10
08:38:11 > git --version # 'git version 2.43.5'
08:38:11 > git fetch --tags --force --progress -- https://github.com/ome/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
08:38:12 > git rev-parse origin/develop^{commit} # timeout=10
08:38:12Checking out Revision 3503438a652ff5c436d0370e6643a16cb45f9b52 (origin/develop)
08:38:12 > git config core.sparsecheckout # timeout=10
08:38:12 > git checkout -f 3503438a652ff5c436d0370e6643a16cb45f9b52 # timeout=30
08:38:12Commit message: "Merge pull request #6436 from will-moore/fix_getObjects_by_group"
08:38:12 > git rev-list --no-walk 3503438a652ff5c436d0370e6643a16cb45f9b52 # timeout=10
08:38:12Cleaning workspace
08:38:12 > git rev-parse --verify HEAD # timeout=10
08:38:12Resetting working tree
08:38:12 > git reset --hard # timeout=10
08:38:12 > git clean -fdx # timeout=10
08:38:12Copied 1 artifact from "OMERO-python-superbuild-build" build number 54008:38:12[OMERO-push] $ /bin/bash -xe /tmp/jenkins4992092153827192681.sh
08:38:12+ python3.11 -mvenv venv
08:38:14+ source /home/omero/workspace/OMERO-push/venv/bin/activate
08:38:14++ deactivate nondestructive
08:38:14++ '[' -n '' ']'
08:38:14++ '[' -n '' ']'
08:38:14++ hash -r
08:38:14++ '[' -n '' ']'
08:38:14++ unset VIRTUAL_ENV
08:38:14++ unset VIRTUAL_ENV_PROMPT
08:38:14++ '[' '!' nondestructive = nondestructive ']'
08:38:14++ VIRTUAL_ENV=/home/omero/workspace/OMERO-push/venv
08:38:14++ export VIRTUAL_ENV
08:38:14++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
08:38:14++ PATH=/home/omero/workspace/OMERO-push/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
08:38:14++ export PATH
08:38:14++ '[' -n '' ']'
08:38:14++ '[' -z '' ']'
08:38:14++ _OLD_VIRTUAL_PS1=
08:38:14++ PS1='(venv) '
08:38:14++ export PS1
08:38:14++ VIRTUAL_ENV_PROMPT='(venv) '
08:38:14++ export VIRTUAL_ENV_PROMPT
08:38:14++ hash -r
08:38:14+ pip install -U pip
08:38:14Requirement already satisfied: pip in ./venv/lib64/python3.11/site-packages (25.2)
08:38:14+ pip install -U scc
08:38:14Requirement already satisfied: scc in ./venv/lib64/python3.11/site-packages (0.20.0)
08:38:14Requirement already satisfied: PyGithub>=1.54 in ./venv/lib64/python3.11/site-packages (from scc) (2.6.1)
08:38:14Requirement already satisfied: PyYAML>=5.1 in ./venv/lib64/python3.11/site-packages (from scc) (6.0.2)
08:38:14Requirement already satisfied: future in ./venv/lib64/python3.11/site-packages (from scc) (1.0.0)
08:38:14Requirement already satisfied: ruamel.yaml in ./venv/lib64/python3.11/site-packages (from scc) (0.18.10)
08:38:14Requirement already satisfied: ruamel.yaml.jinja2 in ./venv/lib64/python3.11/site-packages (from scc) (0.2.7)
08:38:14Requirement already satisfied: six in ./venv/lib64/python3.11/site-packages (from scc) (1.17.0)
08:38:14Requirement already satisfied: urllib3<2 in ./venv/lib64/python3.11/site-packages (from scc) (1.26.20)
08:38:14Requirement already satisfied: yaclifw<0.3,>=0.2.0 in ./venv/lib64/python3.11/site-packages (from scc) (0.2.0)
08:38:14Requirement already satisfied: pynacl>=1.4.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (1.5.0)
08:38:14Requirement already satisfied: requests>=2.14.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (2.32.3)
08:38:14Requirement already satisfied: pyjwt>=2.4.0 in ./venv/lib64/python3.11/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.10.1)
08:38:14Requirement already satisfied: typing-extensions>=4.0.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (4.13.0)
08:38:14Requirement already satisfied: Deprecated in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (1.2.18)
08:38:14Requirement already satisfied: cryptography>=3.4.0 in ./venv/lib64/python3.11/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (44.0.2)
08:38:14Requirement already satisfied: cffi>=1.12 in ./venv/lib64/python3.11/site-packages (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (1.17.1)
08:38:14Requirement already satisfied: pycparser in ./venv/lib64/python3.11/site-packages (from cffi>=1.12->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.22)
08:38:14Requirement already satisfied: charset-normalizer<4,>=2 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.4.1)
08:38:14Requirement already satisfied: idna<4,>=2.5 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.10)
08:38:14Requirement already satisfied: certifi>=2017.4.17 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (2025.1.31)
08:38:14Requirement already satisfied: wrapt<2,>=1.10 in ./venv/lib64/python3.11/site-packages (from Deprecated->PyGithub>=1.54->scc) (1.17.2)
08:38:14Requirement already satisfied: ruamel.yaml.clib>=0.2.7 in ./venv/lib64/python3.11/site-packages (from ruamel.yaml->scc) (0.2.12)
08:38:15+ test -e src
08:38:15+ cd src
08:38:15++ git config github.user
08:38:15+ user=snoopycrimecop
08:38:15+ scc merge develop --no-ask --reset --shallow -S success-only
08:38:182025-10-09 08:38:18,998 [ scc.merge] INFO Merging Pull Request(s) based on develop
08:38:182025-10-09 08:38:18,998 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
08:38:182025-10-09 08:38:18,998 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
08:38:182025-10-09 08:38:18,998 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
08:38:182025-10-09 08:38:18,998 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
08:38:182025-10-09 08:38:18,998 [ scc.merge] INFO Excluding Pull Request(s) without successful status
08:38:392025-10-09 08:38:39,274 [ scc.merge] INFO Repository: ome/openmicroscopy
08:38:392025-10-09 08:38:39,275 [ scc.merge] INFO Excluded PRs:
08:38:392025-10-09 08:38:39,275 [ scc.merge] INFO - PR 6423 jburel 'Use \d' (status: failure)
08:38:392025-10-09 08:38:39,275 [ scc.merge] INFO - PR 6319 dominikl 'Add integration test for joining session' (exclude comment)
08:38:392025-10-09 08:38:39,275 [ scc.merge] INFO - PR 6212 jburel 'add test to import images' (exclude comment)
08:38:392025-10-09 08:38:39,275 [ scc.merge] INFO Already up to date.
08:38:392025-10-09 08:38:39,275 [ scc.merge] INFO
08:38:392025-10-09 08:38:39,275 [ scc.merge] INFO Merged PRs:
08:38:392025-10-09 08:38:39,275 [ scc.merge] INFO - PR 6309 jburel 'add try block'
08:38:392025-10-09 08:38:39,275 [ scc.merge] INFO - PR 6353 jburel 'remove dependencies'
08:38:392025-10-09 08:38:39,275 [ scc.merge] INFO - PR 6428 sbesson 'Remove MaxPermSize flag in the build system'
08:38:392025-10-09 08:38:39,275 [ scc.merge] INFO - PR 6438 sbesson 'Update OMERO.py gateway test_wrapper integration test'
08:38:392025-10-09 08:38:39,275 [ scc.merge] INFO
08:38:39+ cp etc/omero.properties etc/omero.properties.bak
08:38:39+ rm etc/omero.properties
08:38:39+ touch etc/omero.properties
08:38:39++ sed -n '/Internal dependencies/=' etc/omero.properties.bak
08:38:39+ ne=249
08:38:39++ sed -n 1,249p etc/omero.properties.bak
08:38:39+ line='##
08:38:39## omero.properties
08:38:39## ----------------
08:38:39##
08:38:39## DO NOT EDIT!
08:38:39##
08:38:39##
08:38:39## Any of these properties can be altered by using `omero config`. MODIFYING
08:38:39## THIS FILE DOES NOT ALTER SERVER BEHAVIOR. It solely defines the defaults
08:38:39## at compile time!
08:38:39##
08:38:39## For an overview of these properties, see
08:38:39## https://docs.openmicroscopy.org/latest/omero/sysadmins/config.html08:38:39##
08:38:39## Properties marked with "DEVELOPMENT" should not be used in production.
08:38:3908:38:39# Comma separated list of Ice transports available to clients. The default
08:38:39# value ("ssl,tcp") instructs Ice to open the ports specified by the
08:38:39# omero.ports.ssl and omero.ports.tcp properties. Restricting to "ssl"
08:38:39# will prevent all non-encrypted connections to the OMERO server.
08:38:39#
08:38:39# Additionally, there are two experimental values for using websockets:
08:38:39# "ws" and "wss" for unencrypted and encrypted, respectively. The ports
08:38:39# that are opened are controlled by the omero.ports.ws and omero.ports.wss
08:38:39# properties. To enable all possible protocols use: "ssl,tcp,wss,ws".
08:38:39#
08:38:39# Note: When using websockets behind a web server like nginx, additional
08:38:39# configuration may be needed.
08:38:39omero.client.icetransports=ssl,tcp
08:38:3908:38:39# The prefix to apply to all port numbers (SSL, TCP, registry) used by the
08:38:39# server
08:38:39omero.ports.prefix=
08:38:3908:38:39# The Glacier2 SSL port number to use
08:38:39omero.ports.ssl=4064
08:38:3908:38:39# The Glacier2 TCP port number to use (unencrypted)
08:38:39omero.ports.tcp=4063
08:38:3908:38:39# The Glacier2 WSS port number to use
08:38:39omero.ports.wss=4066
08:38:3908:38:39# The Glacier2 WS port number to use (unencrypted)
08:38:39omero.ports.ws=4065
08:38:3908:38:39# The IceGrid registry port number to use
08:38:39omero.ports.registry=4061
08:38:3908:38:39#############################################
08:38:39## JVM configuration
08:38:39##
08:38:39## Note: changes to the omero.jvmcfg properties
08:38:39## will *not* be reflected in OMERO.server
08:38:39## since they are defined in OMERO.py.
08:38:39#############################################
08:38:39## (For documentation only)
08:38:39# Memory strategy which will be used by default.
08:38:39# Options include: percent, manual
08:38:39omero.jvmcfg.strategy=percent
08:38:3908:38:39## (For documentation only)
08:38:39# Explicit value for the `-Xmx` argument, e.g.
08:38:39# "1g"
08:38:39omero.jvmcfg.heap_size=
08:38:3908:38:39## (For documentation only)
08:38:39# Explicit value for the MaxPermSize argument
08:38:39# to the JVM, e.g. "500M". Ignored for Java8+
08:38:39omero.jvmcfg.perm_gen=
08:38:3908:38:39## (For documentation only)
08:38:39# Toggles on or off heap dumps on OOMs. Default is "off".
08:38:39# The special value "tmp" will create the heap dumps in
08:38:39# your temp directory.
08:38:39omero.jvmcfg.heap_dump=
08:38:3908:38:39## (For documentation only)
08:38:39# Used only by the percent strategy. An integer between 0
08:38:39# and 100 which is the percent of active memory that will
08:38:39# be used by the service.
08:38:39omero.jvmcfg.percent=
08:38:3908:38:39## (For documentation only)
08:38:39# Contains other parameters which should be passed to the
08:38:39# JVM. The value of "append" is treated as if it were on
08:38:39# the command line so will be separated on whitespace.
08:38:39# For example, '\''-XX:-PrintGC -XX:+UseCompressedOops'\'' would
08:38:39# results in two new arguments.
08:38:39# Note that when using `config set` from the command line
08:38:39# one may need to give a prior `--` option to prevent a value
08:38:39# starting with `-` from already being parsed as an option,
08:38:39# and values may need quoting to prevent whitespace or other
08:38:39# significant characters from being interpreted prematurely.
08:38:3908:38:39omero.jvmcfg.append=
08:38:3908:38:39## (For documentation only)
08:38:39# Manual override of the total system memory that
08:38:39# OMERO will *think* is present on the local OS (MB).
08:38:39# If unset, an attempt will be made to detect the actual
08:38:39# amount: first by using the Python library `psutil` and
08:38:39# if that is not installed, by running a Java tool. If
08:38:39# neither works, 4.0GB is assumed.
08:38:39omero.jvmcfg.system_memory=
08:38:3908:38:39## (For documentation only)
08:38:39# Suggestion for strategies as to the minimum memory
08:38:39# that they will use for calculating JVM settings (MB).
08:38:39omero.jvmcfg.min_system_memory=3414
08:38:3908:38:39## (For documentation only)
08:38:39# Suggestion for strategies as to the maximum memory
08:38:39# that they will use for calculating JVM settings (MB).
08:38:39omero.jvmcfg.max_system_memory=48000
08:38:3908:38:3908:38:39#############################################
08:38:39## Logging properties
08:38:39##
08:38:39## Note: changes to the default omero.logging values in
08:38:39## this file will *not* be reflected in OMERO.server
08:38:39## since they are defined in OMERO.py
08:38:39#############################################
08:38:3908:38:39## (For documentation only)
08:38:39# Relative server directory where the log files should be stored.
08:38:39omero.logging.directory=var/log/
08:38:3908:38:39## (For documentation only)
08:38:39# Whether the server log files should be rotated at a certain time
08:38:39# interval. If true, log files will be rolled over at midnight.
08:38:39# Otherwise, log files will be rolled over at a predetermined size,
08:38:39# see omero.logging.logsize for more information.
08:38:39omero.logging.timedlog=false
08:38:3908:38:39## (For documentation only)
08:38:39# If omero.logging.timedlog is false or unset, specifies the
08:38:39# maximum size of the server log files in bytes above which a
08:38:39# new log file should be created.
08:38:39omero.logging.logsize=5000000
08:38:3908:38:39## (For documentation only)
08:38:39# If omero.logging.timedlog is false or unset, specifies the
08:38:39# number of old server log files that should be kept. Old log
08:38:39# files will be saved by appending the extensions '\''.1'\'', '\''.2'\'' etc.
08:38:39omero.logging.lognum=9
08:38:3908:38:39## (For documentation only)
08:38:39# Specifies the threshold for the Python servers log files. Logging messages
08:38:39# which are less severe than this value will be ignored. For a list of
08:38:39# available values, see https://docs.python.org/3/library/logging.html#levels.
08:38:39omero.logging.level=20
08:38:3908:38:39#############################################
08:38:39## Ice overrides
08:38:39##
08:38:39## Though not used directly by OMERO, a number
08:38:39## of properties prefixed with "Ice.*" will
08:38:39## alter the behavior of the OMERO runtime
08:38:39## by configuring the Ice communicators. For a
08:38:39## full listing see:
08:38:39##
08:38:39## http://doc.zeroc.com/display/Ice/Property+Reference08:38:39## For more information see
08:38:39## https://docs.openmicroscopy.org/latest/omero/sysadmins/troubleshooting.html#server-fails-to-start08:38:39#############################################
08:38:3908:38:39# Disable IPv6 by setting to 0. Only needed in
08:38:39# certain situations.
08:38:39Ice.IPv6=1
08:38:3908:38:39# Glacier2Template IceSSL defaults and overrides,
08:38:39# see https://doc.zeroc.com/ice/3.6/property-reference/icessl.
08:38:39# Any property beginning ``omero.glacier2.IceSSL.`` will be used to
08:38:39# update the corresponding IceSSL. property.
08:38:39omero.glacier2.IceSSL=
08:38:3908:38:39# Glacier2Template SSL maximum allowed protocol (mac bug)
08:38:39omero.glacier2.IceSSL.ProtocolVersionMax=tls1_1
08:38:39# Glacier2Template SSL allowed cipher suites
08:38:39omero.glacier2.IceSSL.Ciphers=ADH:!LOW:!MD5:!EXP:!3DES:@STRENGTH
08:38:39# Glacier2Template SSL verification requirements
08:38:39omero.glacier2.IceSSL.VerifyPeer=0
08:38:39# Glacier2Template SSL allowed protocols
08:38:39omero.glacier2.IceSSL.Protocols=tls1
08:38:3908:38:39# Override the default set of OMERO services.
08:38:39# For example, to run OMERO.server with Blitz and Tables only
08:38:39# (i.e. disable Processor, DropBox, Indexer, PixelData)
08:38:39# set this to ``master:Blitz-0,Tables-0``.
08:38:39# Also use this to distribute OMERO services across multiple nodes,
08:38:39# for example:
08:38:39# ``master:Blitz-0,Tables-0 worker1:Processor-0``.
08:38:39# See
08:38:39# https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples08:38:39omero.server.nodedescriptors=
08:38:3908:38:39#############################################
08:38:39## Darwin (OS X) specific defaults for templated configuration files only.
08:38:39## ``_xxx.yyy.darwin`` properties will override xxx.yyy properties in this
08:38:39## file.
08:38:39## Do not set these properties in ``omero config``, instead set the original
08:38:39## ``xxx.yyy`` property
08:38:39#############################################
08:38:39_omero.glacier2.IceSSL.Ciphers.darwin=(AES)
08:38:3908:38:39## (For documentation only)
08:38:39# Name of the Python module to use when starting the Tables service
08:38:39omero.tables.module=runTables
08:38:3908:38:39#############################################
08:38:39## Server product name for release artifacts
08:38:39#############################################
08:38:39product.name=OMERO.server
08:38:3908:38:39#############################################
08:38:39### Properties below this marker are ignored by
08:38:39### omero.install.config_parser.PropertyParser
08:38:39### END
08:38:3908:38:39#############################################
08:38:39## Library versions
08:38:39#############################################
08:38:39##
08:38:39versions.findbugs=1.2.1
08:38:39versions.ice36=3.6.5
08:38:39versions.ice36_lib=36
08:38:39## internal
08:38:39versions.omeroshares36=3.6.3
08:38:39versions.omeromock36=3.6.3
08:38:39versions.icedb36=3.6.3
08:38:39versions.ipython=1.2.1
08:38:3908:38:39versions.janino=2.5.10
08:38:3908:38:39versions.reportng=1.1.1
08:38:3908:38:39versions.testng=7.5
08:38:39versions.velocity=1.4
08:38:3908:38:39versions.omero-pypi=https://pypi.io/packages/source/o/PACKAGE08:38:39versions.omero-scripts-url=${versions.omero-pypi}
08:38:3908:38:39###
08:38:39### Appended Values
08:38:39###
08:38:3908:38:39## Internal dependencies'
08:38:39+ echo '##
08:38:39## omero.properties
08:38:39## ----------------
08:38:39##
08:38:39## DO NOT EDIT!
08:38:39##
08:38:39##
08:38:39## Any of these properties can be altered by using `omero config`. MODIFYING
08:38:39## THIS FILE DOES NOT ALTER SERVER BEHAVIOR. It solely defines the defaults
08:38:39## at compile time!
08:38:39##
08:38:39## For an overview of these properties, see
08:38:39## https://docs.openmicroscopy.org/latest/omero/sysadmins/config.html08:38:39##
08:38:39## Properties marked with "DEVELOPMENT" should not be used in production.
08:38:3908:38:39# Comma separated list of Ice transports available to clients. The default
08:38:39# value ("ssl,tcp") instructs Ice to open the ports specified by the
08:38:39# omero.ports.ssl and omero.ports.tcp properties. Restricting to "ssl"
08:38:39# will prevent all non-encrypted connections to the OMERO server.
08:38:39#
08:38:39# Additionally, there are two experimental values for using websockets:
08:38:39# "ws" and "wss" for unencrypted and encrypted, respectively. The ports
08:38:39# that are opened are controlled by the omero.ports.ws and omero.ports.wss
08:38:39# properties. To enable all possible protocols use: "ssl,tcp,wss,ws".
08:38:39#
08:38:39# Note: When using websockets behind a web server like nginx, additional
08:38:39# configuration may be needed.
08:38:39omero.client.icetransports=ssl,tcp
08:38:3908:38:39# The prefix to apply to all port numbers (SSL, TCP, registry) used by the
08:38:39# server
08:38:39omero.ports.prefix=
08:38:3908:38:39# The Glacier2 SSL port number to use
08:38:39omero.ports.ssl=4064
08:38:3908:38:39# The Glacier2 TCP port number to use (unencrypted)
08:38:39omero.ports.tcp=4063
08:38:3908:38:39# The Glacier2 WSS port number to use
08:38:39omero.ports.wss=4066
08:38:3908:38:39# The Glacier2 WS port number to use (unencrypted)
08:38:39omero.ports.ws=4065
08:38:3908:38:39# The IceGrid registry port number to use
08:38:39omero.ports.registry=4061
08:38:3908:38:39#############################################
08:38:39## JVM configuration
08:38:39##
08:38:39## Note: changes to the omero.jvmcfg properties
08:38:39## will *not* be reflected in OMERO.server
08:38:39## since they are defined in OMERO.py.
08:38:39#############################################
08:38:39## (For documentation only)
08:38:39# Memory strategy which will be used by default.
08:38:39# Options include: percent, manual
08:38:39omero.jvmcfg.strategy=percent
08:38:3908:38:39## (For documentation only)
08:38:39# Explicit value for the `-Xmx` argument, e.g.
08:38:39# "1g"
08:38:39omero.jvmcfg.heap_size=
08:38:3908:38:39## (For documentation only)
08:38:39# Explicit value for the MaxPermSize argument
08:38:39# to the JVM, e.g. "500M". Ignored for Java8+
08:38:39omero.jvmcfg.perm_gen=
08:38:3908:38:39## (For documentation only)
08:38:39# Toggles on or off heap dumps on OOMs. Default is "off".
08:38:39# The special value "tmp" will create the heap dumps in
08:38:39# your temp directory.
08:38:39omero.jvmcfg.heap_dump=
08:38:3908:38:39## (For documentation only)
08:38:39# Used only by the percent strategy. An integer between 0
08:38:39# and 100 which is the percent of active memory that will
08:38:39# be used by the service.
08:38:39omero.jvmcfg.percent=
08:38:3908:38:39## (For documentation only)
08:38:39# Contains other parameters which should be passed to the
08:38:39# JVM. The value of "append" is treated as if it were on
08:38:39# the command line so will be separated on whitespace.
08:38:39# For example, '\''-XX:-PrintGC -XX:+UseCompressedOops'\'' would
08:38:39# results in two new arguments.
08:38:39# Note that when using `config set` from the command line
08:38:39# one may need to give a prior `--` option to prevent a value
08:38:39# starting with `-` from already being parsed as an option,
08:38:39# and values may need quoting to prevent whitespace or other
08:38:39# significant characters from being interpreted prematurely.
08:38:3908:38:39omero.jvmcfg.append=
08:38:3908:38:39## (For documentation only)
08:38:39# Manual override of the total system memory that
08:38:39# OMERO will *think* is present on the local OS (MB).
08:38:39# If unset, an attempt will be made to detect the actual
08:38:39# amount: first by using the Python library `psutil` and
08:38:39# if that is not installed, by running a Java tool. If
08:38:39# neither works, 4.0GB is assumed.
08:38:39omero.jvmcfg.system_memory=
08:38:3908:38:39## (For documentation only)
08:38:39# Suggestion for strategies as to the minimum memory
08:38:39# that they will use for calculating JVM settings (MB).
08:38:39omero.jvmcfg.min_system_memory=3414
08:38:3908:38:39## (For documentation only)
08:38:39# Suggestion for strategies as to the maximum memory
08:38:39# that they will use for calculating JVM settings (MB).
08:38:39omero.jvmcfg.max_system_memory=48000
08:38:3908:38:3908:38:39#############################################
08:38:39## Logging properties
08:38:39##
08:38:39## Note: changes to the default omero.logging values in
08:38:39## this file will *not* be reflected in OMERO.server
08:38:39## since they are defined in OMERO.py
08:38:39#############################################
08:38:3908:38:39## (For documentation only)
08:38:39# Relative server directory where the log files should be stored.
08:38:39omero.logging.directory=var/log/
08:38:3908:38:39## (For documentation only)
08:38:39# Whether the server log files should be rotated at a certain time
08:38:39# interval. If true, log files will be rolled over at midnight.
08:38:39# Otherwise, log files will be rolled over at a predetermined size,
08:38:39# see omero.logging.logsize for more information.
08:38:39omero.logging.timedlog=false
08:38:3908:38:39## (For documentation only)
08:38:39# If omero.logging.timedlog is false or unset, specifies the
08:38:39# maximum size of the server log files in bytes above which a
08:38:39# new log file should be created.
08:38:39omero.logging.logsize=5000000
08:38:3908:38:39## (For documentation only)
08:38:39# If omero.logging.timedlog is false or unset, specifies the
08:38:39# number of old server log files that should be kept. Old log
08:38:39# files will be saved by appending the extensions '\''.1'\'', '\''.2'\'' etc.
08:38:39omero.logging.lognum=9
08:38:3908:38:39## (For documentation only)
08:38:39# Specifies the threshold for the Python servers log files. Logging messages
08:38:39# which are less severe than this value will be ignored. For a list of
08:38:39# available values, see https://docs.python.org/3/library/logging.html#levels.
08:38:39omero.logging.level=20
08:38:3908:38:39#############################################
08:38:39## Ice overrides
08:38:39##
08:38:39## Though not used directly by OMERO, a number
08:38:39## of properties prefixed with "Ice.*" will
08:38:39## alter the behavior of the OMERO runtime
08:38:39## by configuring the Ice communicators. For a
08:38:39## full listing see:
08:38:39##
08:38:39## http://doc.zeroc.com/display/Ice/Property+Reference08:38:39## For more information see
08:38:39## https://docs.openmicroscopy.org/latest/omero/sysadmins/troubleshooting.html#server-fails-to-start08:38:39#############################################
08:38:3908:38:39# Disable IPv6 by setting to 0. Only needed in
08:38:39# certain situations.
08:38:39Ice.IPv6=1
08:38:3908:38:39# Glacier2Template IceSSL defaults and overrides,
08:38:39# see https://doc.zeroc.com/ice/3.6/property-reference/icessl.
08:38:39# Any property beginning ``omero.glacier2.IceSSL.`` will be used to
08:38:39# update the corresponding IceSSL. property.
08:38:39omero.glacier2.IceSSL=
08:38:3908:38:39# Glacier2Template SSL maximum allowed protocol (mac bug)
08:38:39omero.glacier2.IceSSL.ProtocolVersionMax=tls1_1
08:38:39# Glacier2Template SSL allowed cipher suites
08:38:39omero.glacier2.IceSSL.Ciphers=ADH:!LOW:!MD5:!EXP:!3DES:@STRENGTH
08:38:39# Glacier2Template SSL verification requirements
08:38:39omero.glacier2.IceSSL.VerifyPeer=0
08:38:39# Glacier2Template SSL allowed protocols
08:38:39omero.glacier2.IceSSL.Protocols=tls1
08:38:3908:38:39# Override the default set of OMERO services.
08:38:39# For example, to run OMERO.server with Blitz and Tables only
08:38:39# (i.e. disable Processor, DropBox, Indexer, PixelData)
08:38:39# set this to ``master:Blitz-0,Tables-0``.
08:38:39# Also use this to distribute OMERO services across multiple nodes,
08:38:39# for example:
08:38:39# ``master:Blitz-0,Tables-0 worker1:Processor-0``.
08:38:39# See
08:38:39# https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples08:38:39omero.server.nodedescriptors=
08:38:3908:38:39#############################################
08:38:39## Darwin (OS X) specific defaults for templated configuration files only.
08:38:39## ``_xxx.yyy.darwin`` properties will override xxx.yyy properties in this
08:38:39## file.
08:38:39## Do not set these properties in ``omero config``, instead set the original
08:38:39## ``xxx.yyy`` property
08:38:39#############################################
08:38:39_omero.glacier2.IceSSL.Ciphers.darwin=(AES)
08:38:3908:38:39## (For documentation only)
08:38:39# Name of the Python module to use when starting the Tables service
08:38:39omero.tables.module=runTables
08:38:3908:38:39#############################################
08:38:39## Server product name for release artifacts
08:38:39#############################################
08:38:39product.name=OMERO.server
08:38:3908:38:39#############################################
08:38:39### Properties below this marker are ignored by
08:38:39### omero.install.config_parser.PropertyParser
08:38:39### END
08:38:3908:38:39#############################################
08:38:39## Library versions
08:38:39#############################################
08:38:39##
08:38:39versions.findbugs=1.2.1
08:38:39versions.ice36=3.6.5
08:38:39versions.ice36_lib=36
08:38:39## internal
08:38:39versions.omeroshares36=3.6.3
08:38:39versions.omeromock36=3.6.3
08:38:39versions.icedb36=3.6.3
08:38:39versions.ipython=1.2.1
08:38:3908:38:39versions.janino=2.5.10
08:38:3908:38:39versions.reportng=1.1.1
08:38:3908:38:39versions.testng=7.5
08:38:39versions.velocity=1.4
08:38:3908:38:39versions.omero-pypi=https://pypi.io/packages/source/o/PACKAGE08:38:39versions.omero-scripts-url=${versions.omero-pypi}
08:38:3908:38:39###
08:38:39### Appended Values
08:38:39###
08:38:3908:38:39## Internal dependencies'
08:38:39+ echo versions.omero-pypi=https://merge-ci.openmicroscopy.org/jenkins//job/OMERO-python-superbuild-build/lastSuccessfulBuild/artifact/PACKAGE/dist/08:38:39+ echo versions.omero-github=https://github.com/snoopycrimecop/PACKAGE/archive08:38:39+ echo versions.scripts-prefix=
08:38:39+ echo versions.scripts=merge_ci
08:38:39+ cat /home/omero/workspace/OMERO-push/version.properties
08:38:39+ git commit -a -m 'Add version.properties to etc/omero.properties'
08:38:39[detached HEAD 6a1d635416] Add version.properties to etc/omero.properties
08:38:39 1 file changed, 46 insertions(+), 7 deletions(-)
08:38:39+ git push -f git@github.com:snoopycrimecop/openmicroscopy.git HEAD:refs/heads/merge_ci
08:38:40To github.com:snoopycrimecop/openmicroscopy.git
08:38:40 + 3473cccfd9...6a1d635416 HEAD -> merge_ci (forced update)
08:38:40Finished: SUCCESS
![[Jenkins]](/jenkins/static/9161e9ff/images/svgs/logo.svg){kind=logo}
