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Full LogTestTestTestTestTestTestTestTestTestTestTestTestTest
Found existing installation: pip 22.3.1
Uninstalling pip-22.3.1:
Successfully uninstalled pip-22.3.1
Successfully installed pip-25.1.1
WARNING: There was an error checking the latest version of pip.
+ python3.11 -m pip install scc
Collecting scc
Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
Using cached ruamel.yaml-0.18.12-py3-none-any.whl.metadata (24 kB)
Collecting ruamel.yaml.jinja2 (from scc)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
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Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
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Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
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Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
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Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
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Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.4.26 cffi-1.17.1 charset-normalizer-3.4.2 cryptography-45.0.3 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.12 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.14.0 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-06-05 00:31:04,491 [ scc.config] DEBUG Found github.token
2025-06-05 00:31:04,493 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:04,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:31:04,927 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:05,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:31:05,347 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:05,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-06-05 00:31:05,513 [ scc.gh] DEBUG 4601 remaining from 5000 (Reset at 01:06
2025-06-05 00:31:05,514 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-05 00:31:05,516 [ scc.git] DEBUG Check current status
2025-06-05 00:31:05,516 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-05 00:31:05,519 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4
2025-06-05 00:31:05,519 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-05 00:31:05,560 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-06-05 00:31:05,563 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-06-05 00:31:05,572 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49)
2025-06-05 00:31:05,576 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b)
2025-06-05 00:31:05,580 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847)
2025-06-05 00:31:05,583 [ scc.config] DEBUG Found remote.origin.url
2025-06-05 00:31:05,764 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:06,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2025-06-05 00:31:06,354 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:06,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-05 00:31:06,996 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:07,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-05 00:31:07,438 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:07,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-05 00:31:07,943 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:08,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-05 00:31:08,169 [ scc.git] DEBUG Resetting...
2025-06-05 00:31:08,169 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-06-05 00:31:08,174 [ scc.git] DEBUG HEAD is now at 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4
2025-06-05 00:31:08,174 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-06-05 00:31:08,228 [ scc.git] DEBUG Check current status
2025-06-05 00:31:08,228 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-05 00:31:08,231 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4
2025-06-05 00:31:08,231 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-05 00:31:08,269 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-06-05 00:31:08,273 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-06-05 00:31:08,281 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49)
2025-06-05 00:31:08,286 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b)
2025-06-05 00:31:08,290 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847)
2025-06-05 00:31:08,290 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-06-05 00:31:08,290 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-06-05 00:31:08,290 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-06-05 00:31:08,290 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-06-05 00:31:08,290 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-06-05 00:31:08,290 [ scc.repo] DEBUG ## PRs found:
2025-06-05 00:31:08,420 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:08,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2025-06-05 00:31:08,934 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:09,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/321 HTTP/1.1" 200 None
2025-06-05 00:31:09,254 [ scc.repo] DEBUG # ... Include label: dependencies
2025-06-05 00:31:09,255 [ scc.repo] DEBUG - PR 321 dependabot[bot] 'Bump omero-py from `e485be4` to `d2f8480`'
2025-06-05 00:31:09,505 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:09,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/320 HTTP/1.1" 200 None
2025-06-05 00:31:09,860 [ scc.repo] DEBUG # ... Include label: dependencies
2025-06-05 00:31:09,860 [ scc.repo] DEBUG - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`'
2025-06-05 00:31:09,860 [ scc.repo] DEBUG ## Branches found:
2025-06-05 00:31:09,860 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:31:09,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:31:09,863 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-05 00:31:09,865 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-05 00:31:09,865 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-05 00:31:09,867 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-05 00:31:09,870 [ scc.git] DEBUG Already up to date.
2025-06-05 00:31:09,870 [ scc.git] DEBUG Calling 'git fetch origin pull/320/head'
2025-06-05 00:31:10,159 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2025-06-05 00:31:10,160 [ scc.git] DEBUG * branch refs/pull/320/head -> FETCH_HEAD
2025-06-05 00:31:10,166 [ scc.git] DEBUG Calling 'git fetch origin pull/321/head'
2025-06-05 00:31:10,494 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2025-06-05 00:31:10,494 [ scc.git] DEBUG * branch refs/pull/321/head -> FETCH_HEAD
2025-06-05 00:31:10,500 [ scc.git] DEBUG ## Unique users: []
2025-06-05 00:31:10,500 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:31:10,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:31:10,502 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a784439f1291b60e07536b5e1fccabf5d90baa1'
2025-06-05 00:31:10,505 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:31:10,507 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 320 (Bump omero-web from `4b979f8` to `c1b8fef`) 1a784439f1291b60e07536b5e1fccabf5d90baa1'
2025-06-05 00:31:10,516 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:31:10,518 [ scc.git] DEBUG omero-web | 2 +-
2025-06-05 00:31:10,518 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-06-05 00:31:10,520 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:10,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:31:10,703 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4f5878abfb25d73079eb6158b59e640fbbb28207'
2025-06-05 00:31:10,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:31:10,708 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 321 (Bump omero-py from `e485be4` to `d2f8480`) 4f5878abfb25d73079eb6158b59e640fbbb28207'
2025-06-05 00:31:10,718 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:31:10,720 [ scc.git] DEBUG omero-py | 2 +-
2025-06-05 00:31:10,720 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-06-05 00:31:10,954 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:11,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:31:11,124 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-05 00:31:11,184 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'd2f8480125bf0bda4e5663204366261a398266d2'
2025-06-05 00:31:11,207 [ scc.git] DEBUG Submodule path 'omero-web': checked out 'c1b8fefc872c1cadf5daba9476b405c59016abd5'
2025-06-05 00:31:11,208 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:31:11,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:31:11,210 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-05 00:31:11,242 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6ed6843ad0> has no local changes
2025-06-05 00:31:11,242 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`'
- PR 321 dependabot[bot] 'Bump omero-py from `e485be4` to `d2f8480`'
Generated by OMERO-python-superbuild-push#432 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/432/)'
2025-06-05 00:31:11,270 [ scc.git] DEBUG [detached HEAD 908993d] merge master -Dorg -Snone
2025-06-05 00:31:11,270 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2025-06-05 00:31:11,270 [ scc.merge] INFO Already up to date.
2025-06-05 00:31:11,270 [ scc.merge] INFO
2025-06-05 00:31:11,270 [ scc.merge] INFO Merged PRs:
2025-06-05 00:31:11,270 [ scc.merge] INFO - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`'
2025-06-05 00:31:11,270 [ scc.merge] INFO - PR 321 dependabot[bot] 'Bump omero-py from `e485be4` to `d2f8480`'
2025-06-05 00:31:11,270 [ scc.merge] INFO
2025-06-05 00:31:11,270 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-06-05 00:31:11,270 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2025-06-05 00:31:13,394 [ scc.config] DEBUG Found github.token
2025-06-05 00:31:13,396 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:13,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:31:13,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:14,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:31:14,272 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:14,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-06-05 00:31:14,435 [ scc.gh] DEBUG 4589 remaining from 5000 (Reset at 01:06
2025-06-05 00:31:14,436 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-05 00:31:14,438 [ scc.git] DEBUG Check current status
2025-06-05 00:31:14,438 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-05 00:31:14,441 [ scc.git] DEBUG 908993d merge master -Dorg -Snone
2025-06-05 00:31:14,441 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-05 00:31:14,480 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-06-05 00:31:14,483 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-06-05 00:31:14,492 [ scc.git] DEBUG d2f8480125bf0bda4e5663204366261a398266d2 omero-py (v5.20.0-16-gd2f84801)
2025-06-05 00:31:14,496 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b)
2025-06-05 00:31:14,500 [ scc.git] DEBUG c1b8fefc872c1cadf5daba9476b405c59016abd5 omero-web (v5.29.0-5-gc1b8fefc8)
2025-06-05 00:31:14,503 [ scc.config] DEBUG Found remote.origin.url
2025-06-05 00:31:14,503 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2025-06-05 00:31:14,504 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2025-06-05 00:31:14,687 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:14,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2025-06-05 00:31:15,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:15,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-05 00:31:15,776 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:16,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-05 00:31:16,295 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:16,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-05 00:31:16,796 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:16,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-05 00:31:16,987 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-05 00:31:17,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-06-05 00:31:17,034 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-05 00:31:17,036 [ scc.git] DEBUG Check current status
2025-06-05 00:31:17,036 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-05 00:31:17,038 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build
2025-06-05 00:31:17,038 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-05 00:31:17,077 [ scc.config] DEBUG Found remote.origin.url
2025-06-05 00:31:17,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:17,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2025-06-05 00:31:17,768 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:17,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-05 00:31:18,229 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:18,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-05 00:31:18,700 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:18,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-05 00:31:19,184 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:19,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-05 00:31:19,382 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-05 00:31:19,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-05 00:31:19,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-06-05 00:31:19,420 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-05 00:31:19,422 [ scc.git] DEBUG Check current status
2025-06-05 00:31:19,422 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-05 00:31:19,424 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build
2025-06-05 00:31:19,424 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-05 00:31:19,462 [ scc.config] DEBUG Found remote.origin.url
2025-06-05 00:31:19,632 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:19,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2025-06-05 00:31:20,140 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:20,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-05 00:31:20,643 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:20,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-05 00:31:21,083 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:21,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-05 00:31:21,518 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:21,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-05 00:31:21,703 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-05 00:31:21,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-05 00:31:21,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-06-05 00:31:21,743 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-05 00:31:21,745 [ scc.git] DEBUG Check current status
2025-06-05 00:31:21,745 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-05 00:31:21,747 [ scc.git] DEBUG d2f84801 Merge pull request #453 from will-moore/externalInfo
2025-06-05 00:31:21,748 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-05 00:31:21,786 [ scc.config] DEBUG Found remote.origin.url
2025-06-05 00:31:21,953 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:22,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2025-06-05 00:31:22,484 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:22,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-05 00:31:22,976 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:23,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-05 00:31:23,396 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:23,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-05 00:31:23,837 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:24,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-05 00:31:24,019 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-05 00:31:24,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-05 00:31:24,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-06-05 00:31:24,060 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-05 00:31:24,062 [ scc.git] DEBUG Check current status
2025-06-05 00:31:24,062 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-05 00:31:24,065 [ scc.git] DEBUG 950b28b Merge pull request #225 from will-moore/test_fixes
2025-06-05 00:31:24,065 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-05 00:31:24,104 [ scc.config] DEBUG Found remote.origin.url
2025-06-05 00:31:24,104 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2025-06-05 00:31:24,270 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:24,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2025-06-05 00:31:24,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:25,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-05 00:31:25,350 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:25,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-05 00:31:25,788 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:26,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-05 00:31:26,253 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:26,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-05 00:31:26,441 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-05 00:31:26,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-05 00:31:26,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-06-05 00:31:26,480 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-05 00:31:26,482 [ scc.git] DEBUG Check current status
2025-06-05 00:31:26,482 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-05 00:31:26,485 [ scc.git] DEBUG c1b8fefc8 Merge pull request #606 from knabar/fix-large-channel-count
2025-06-05 00:31:26,486 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-05 00:31:26,525 [ scc.config] DEBUG Found remote.origin.url
2025-06-05 00:31:26,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:26,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2025-06-05 00:31:27,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:27,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-05 00:31:27,744 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:27,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-05 00:31:28,191 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:28,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-05 00:31:28,635 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:28,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-05 00:31:28,826 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-05 00:31:28,864 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-05 00:31:28,864 [ scc.git] DEBUG Resetting...
2025-06-05 00:31:28,864 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-06-05 00:31:28,869 [ scc.git] DEBUG HEAD is now at 908993d merge master -Dorg -Snone
2025-06-05 00:31:28,869 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-06-05 00:31:28,921 [ scc.git] DEBUG Check current status
2025-06-05 00:31:28,922 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-05 00:31:28,924 [ scc.git] DEBUG 908993d merge master -Dorg -Snone
2025-06-05 00:31:28,924 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-05 00:31:28,963 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-06-05 00:31:28,966 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-06-05 00:31:28,974 [ scc.git] DEBUG d2f8480125bf0bda4e5663204366261a398266d2 omero-py (v5.20.0-16-gd2f84801)
2025-06-05 00:31:28,979 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b)
2025-06-05 00:31:28,983 [ scc.git] DEBUG c1b8fefc872c1cadf5daba9476b405c59016abd5 omero-web (v5.29.0-5-gc1b8fefc8)
2025-06-05 00:31:28,984 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-06-05 00:31:28,984 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-06-05 00:31:28,984 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-06-05 00:31:28,984 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-06-05 00:31:28,984 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-06-05 00:31:28,984 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-06-05 00:31:28,984 [ scc.repo] DEBUG ## PRs found:
2025-06-05 00:31:29,076 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:29,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2025-06-05 00:31:29,597 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:29,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/321 HTTP/1.1" 200 None
2025-06-05 00:31:29,875 [ scc.repo] DEBUG # ... Include label: dependencies
2025-06-05 00:31:30,126 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:30,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/4f5878abfb25d73079eb6158b59e640fbbb28207 HTTP/1.1" 200 None
2025-06-05 00:31:30,703 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:30,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/4f5878abfb25d73079eb6158b59e640fbbb28207/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:31:31,222 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:31,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/4f5878abfb25d73079eb6158b59e640fbbb28207 HTTP/1.1" 200 None
2025-06-05 00:31:31,711 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:31,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/4f5878abfb25d73079eb6158b59e640fbbb28207?per_page=1 HTTP/1.1" 200 2
2025-06-05 00:31:31,896 [ scc.repo] DEBUG - PR 321 dependabot[bot] 'Bump omero-py from `e485be4` to `d2f8480`'
2025-06-05 00:31:32,147 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:32,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/320 HTTP/1.1" 200 None
2025-06-05 00:31:32,406 [ scc.repo] DEBUG # ... Include label: dependencies
2025-06-05 00:31:32,656 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:32,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/1a784439f1291b60e07536b5e1fccabf5d90baa1 HTTP/1.1" 200 None
2025-06-05 00:31:33,242 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:33,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/1a784439f1291b60e07536b5e1fccabf5d90baa1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:31:33,688 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:33,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/1a784439f1291b60e07536b5e1fccabf5d90baa1 HTTP/1.1" 200 None
2025-06-05 00:31:34,154 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:34,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/1a784439f1291b60e07536b5e1fccabf5d90baa1?per_page=1 HTTP/1.1" 200 2
2025-06-05 00:31:34,368 [ scc.repo] DEBUG - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`'
2025-06-05 00:31:34,368 [ scc.repo] DEBUG ## Branches found:
2025-06-05 00:31:34,368 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:31:34,368 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:31:34,371 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-05 00:31:34,373 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-05 00:31:34,373 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-05 00:31:34,376 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-05 00:31:34,380 [ scc.git] DEBUG Already up to date.
2025-06-05 00:31:34,380 [ scc.git] DEBUG Calling 'git fetch origin pull/320/head'
2025-06-05 00:31:34,707 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2025-06-05 00:31:34,708 [ scc.git] DEBUG * branch refs/pull/320/head -> FETCH_HEAD
2025-06-05 00:31:34,714 [ scc.git] DEBUG Calling 'git fetch origin pull/321/head'
2025-06-05 00:31:34,987 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2025-06-05 00:31:34,987 [ scc.git] DEBUG * branch refs/pull/321/head -> FETCH_HEAD
2025-06-05 00:31:34,993 [ scc.git] DEBUG ## Unique users: []
2025-06-05 00:31:34,993 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:31:34,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:31:34,995 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a784439f1291b60e07536b5e1fccabf5d90baa1'
2025-06-05 00:31:34,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:31:35,000 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 320 (Bump omero-web from `4b979f8` to `c1b8fef`) 1a784439f1291b60e07536b5e1fccabf5d90baa1'
2025-06-05 00:31:35,003 [ scc.git] DEBUG Already up to date.
2025-06-05 00:31:35,004 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:35,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:31:35,177 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4f5878abfb25d73079eb6158b59e640fbbb28207'
2025-06-05 00:31:35,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:31:35,182 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 321 (Bump omero-py from `e485be4` to `d2f8480`) 4f5878abfb25d73079eb6158b59e640fbbb28207'
2025-06-05 00:31:35,184 [ scc.git] DEBUG Already up to date.
2025-06-05 00:31:35,428 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:35,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:31:35,640 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-05 00:31:35,680 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:31:35,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:31:35,682 [ scc.repo] DEBUG ## PRs found:
2025-06-05 00:31:35,890 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:36,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2025-06-05 00:31:36,428 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:36,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2025-06-05 00:31:36,933 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:37,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2025-06-05 00:31:37,464 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:37,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2025-06-05 00:31:38,015 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:38,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:31:38,508 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:38,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2025-06-05 00:31:39,067 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:39,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2025-06-05 00:31:39,273 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2025-06-05 00:31:39,273 [ scc.repo] DEBUG ## Branches found:
2025-06-05 00:31:39,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-06-05 00:31:39,273 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:31:39,273 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:31:39,276 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-05 00:31:39,278 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-05 00:31:39,278 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-05 00:31:39,281 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-05 00:31:39,284 [ scc.git] DEBUG Already up to date.
2025-06-05 00:31:39,284 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2025-06-05 00:31:39,595 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2025-06-05 00:31:39,595 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2025-06-05 00:31:39,599 [ scc.git] DEBUG ## Unique users: []
2025-06-05 00:31:39,599 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:31:39,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:31:39,601 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2025-06-05 00:31:39,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:31:39,607 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2025-06-05 00:31:39,620 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2025-06-05 00:31:39,620 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2025-06-05 00:31:39,620 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2025-06-05 00:31:39,620 [ scc.git] DEBUG Auto-merging src/fsLists.py
2025-06-05 00:31:39,620 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2025-06-05 00:31:39,620 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2025-06-05 00:31:39,620 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2025-06-05 00:31:39,620 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2025-06-05 00:31:39,620 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2025-06-05 00:31:39,621 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:31:39,626 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2025-06-05 00:31:39,626 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2025-06-05 00:31:39,626 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2025-06-05 00:31:39,626 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2025-06-05 00:31:39,626 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2025-06-05 00:31:39,626 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2025-06-05 00:31:39,626 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2025-06-05 00:31:39,626 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2025-06-05 00:31:39,626 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2025-06-05 00:31:39,626 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2025-06-05 00:31:39,627 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:39,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:31:39,798 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-05 00:31:39,837 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:31:39,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:31:39,839 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-05 00:31:39,878 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-05 00:31:39,882 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1edb2c7f10> has no local changes
2025-06-05 00:31:39,882 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#432 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/432/)'
2025-06-05 00:31:39,889 [ scc.git] DEBUG [detached HEAD 7b827fa] merge master -Dorg -Ssuccess-only
2025-06-05 00:31:39,890 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-05 00:31:39,890 [ scc.repo] DEBUG ## PRs found:
2025-06-05 00:31:40,049 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:40,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2025-06-05 00:31:40,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:41,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2025-06-05 00:31:41,426 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:41,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2025-06-05 00:31:41,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:42,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2025-06-05 00:31:42,430 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:42,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2025-06-05 00:31:42,936 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:43,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2025-06-05 00:31:43,538 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:43,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:31:44,057 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:44,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2025-06-05 00:31:44,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:44,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2025-06-05 00:31:44,795 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2025-06-05 00:31:45,046 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:45,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2025-06-05 00:31:45,526 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:45,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2025-06-05 00:31:46,004 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:46,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2025-06-05 00:31:46,482 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:46,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2025-06-05 00:31:46,735 [ scc.repo] DEBUG ## Branches found:
2025-06-05 00:31:46,735 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-06-05 00:31:46,735 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:31:46,735 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:31:46,738 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-05 00:31:46,740 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-05 00:31:46,740 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-05 00:31:46,743 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-05 00:31:46,747 [ scc.git] DEBUG Already up to date.
2025-06-05 00:31:46,747 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2025-06-05 00:31:47,055 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2025-06-05 00:31:47,055 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2025-06-05 00:31:47,059 [ scc.git] DEBUG ## Unique users: []
2025-06-05 00:31:47,059 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:31:47,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:31:47,062 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2025-06-05 00:31:47,065 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:31:47,067 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2025-06-05 00:31:47,076 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2025-06-05 00:31:47,078 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:31:47,081 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2025-06-05 00:31:47,081 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2025-06-05 00:31:47,081 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2025-06-05 00:31:47,082 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:47,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:31:47,263 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-05 00:31:47,302 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:31:47,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:31:47,304 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-05 00:31:47,341 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-05 00:31:47,345 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1edb14f750> has no local changes
2025-06-05 00:31:47,345 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#432 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/432/)'
2025-06-05 00:31:47,352 [ scc.git] DEBUG [detached HEAD 2bdcd52] merge master -Dorg -Ssuccess-only
2025-06-05 00:31:47,352 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-05 00:31:47,353 [ scc.repo] DEBUG ## PRs found:
2025-06-05 00:31:47,514 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:47,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2025-06-05 00:31:48,135 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:48,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/460 HTTP/1.1" 200 None
2025-06-05 00:31:48,641 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:48,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/460/comments HTTP/1.1" 200 None
2025-06-05 00:31:49,151 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:49,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2c0e9f319dd87422afd281e0734c304636a4a27 HTTP/1.1" 200 None
2025-06-05 00:31:49,677 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:49,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2c0e9f319dd87422afd281e0734c304636a4a27/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:31:50,156 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:50,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2c0e9f319dd87422afd281e0734c304636a4a27/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-05 00:31:50,667 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:50,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2c0e9f319dd87422afd281e0734c304636a4a27 HTTP/1.1" 200 None
2025-06-05 00:31:51,175 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:51,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c2c0e9f319dd87422afd281e0734c304636a4a27?per_page=1 HTTP/1.1" 200 None
2025-06-05 00:31:51,626 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:51,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2c0e9f319dd87422afd281e0734c304636a4a27 HTTP/1.1" 200 None
2025-06-05 00:31:52,081 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:52,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2c0e9f319dd87422afd281e0734c304636a4a27/status HTTP/1.1" 200 None
2025-06-05 00:31:52,275 [ scc.repo] DEBUG - PR 460 sbesson 'omero.testlib: rename test_dir utility as create_managed_dir'
2025-06-05 00:31:52,526 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:52,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None
2025-06-05 00:31:53,017 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:53,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None
2025-06-05 00:31:53,549 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:53,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None
2025-06-05 00:31:54,056 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:54,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None
2025-06-05 00:31:54,559 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:54,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None
2025-06-05 00:31:54,824 [ scc.repo] DEBUG # ... Exclude label: exclude
2025-06-05 00:31:55,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:55,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2025-06-05 00:31:55,580 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:55,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2025-06-05 00:31:56,147 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:56,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2025-06-05 00:31:56,715 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:57,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:31:57,283 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:57,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-05 00:31:57,776 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:57,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2025-06-05 00:31:58,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:58,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2025-06-05 00:31:58,685 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:58,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2025-06-05 00:31:59,145 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:59,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2025-06-05 00:31:59,334 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2025-06-05 00:31:59,585 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:31:59,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2025-06-05 00:32:00,070 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:00,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2025-06-05 00:32:00,568 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:00,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2025-06-05 00:32:01,110 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:01,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:01,815 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:02,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-05 00:32:02,324 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:02,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2025-06-05 00:32:02,829 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:03,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None
2025-06-05 00:32:03,295 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:03,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2025-06-05 00:32:03,820 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:04,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:04,319 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:04,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2025-06-05 00:32:04,825 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:05,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2025-06-05 00:32:05,012 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2025-06-05 00:32:05,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:05,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2025-06-05 00:32:05,759 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:06,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2025-06-05 00:32:06,284 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:06,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2025-06-05 00:32:06,806 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:07,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:07,292 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:07,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2025-06-05 00:32:07,807 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:08,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2
2025-06-05 00:32:08,002 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2025-06-05 00:32:08,252 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:08,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2025-06-05 00:32:08,774 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:09,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2025-06-05 00:32:09,301 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:09,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2025-06-05 00:32:09,847 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:10,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2025-06-05 00:32:10,443 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:10,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2025-06-05 00:32:10,971 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:11,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:11,460 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:11,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2025-06-05 00:32:11,925 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:12,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2025-06-05 00:32:12,152 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2025-06-05 00:32:12,152 [ scc.repo] DEBUG ## Branches found:
2025-06-05 00:32:12,153 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-06-05 00:32:12,153 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:32:12,153 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:32:12,155 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-05 00:32:12,158 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-05 00:32:12,158 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-05 00:32:12,161 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-05 00:32:12,164 [ scc.git] DEBUG Already up to date.
2025-06-05 00:32:12,164 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2025-06-05 00:32:12,502 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-05 00:32:12,502 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2025-06-05 00:32:12,506 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2025-06-05 00:32:12,812 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-05 00:32:12,812 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2025-06-05 00:32:12,816 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2025-06-05 00:32:13,094 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-05 00:32:13,094 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2025-06-05 00:32:13,098 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2025-06-05 00:32:13,361 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-05 00:32:13,361 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2025-06-05 00:32:13,365 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2025-06-05 00:32:13,653 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-05 00:32:13,653 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2025-06-05 00:32:13,658 [ scc.git] DEBUG ## Unique users: []
2025-06-05 00:32:13,658 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:32:13,658 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:32:13,661 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2025-06-05 00:32:13,673 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:32:13,675 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2025-06-05 00:32:13,699 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2025-06-05 00:32:13,699 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2025-06-05 00:32:13,700 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:32:13,704 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2025-06-05 00:32:13,704 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2025-06-05 00:32:13,704 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2025-06-05 00:32:13,706 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:13,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:32:13,874 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2025-06-05 00:32:13,886 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:32:13,888 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2025-06-05 00:32:13,908 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:32:13,910 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2025-06-05 00:32:13,910 [ scc.git] DEBUG connect.py | 11 +++++++++++
2025-06-05 00:32:13,910 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2025-06-05 00:32:13,910 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2025-06-05 00:32:13,910 [ scc.git] DEBUG create mode 100644 connect.py
2025-06-05 00:32:14,125 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:14,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:32:14,291 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2025-06-05 00:32:14,303 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:32:14,306 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2025-06-05 00:32:14,327 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2025-06-05 00:32:14,328 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:32:14,332 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2025-06-05 00:32:14,332 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2025-06-05 00:32:14,542 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:14,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:32:14,715 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2025-06-05 00:32:14,727 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:32:14,729 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2025-06-05 00:32:14,761 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2025-06-05 00:32:14,763 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:32:14,769 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2025-06-05 00:32:14,769 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2025-06-05 00:32:14,966 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:15,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:32:15,133 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c2c0e9f319dd87422afd281e0734c304636a4a27'
2025-06-05 00:32:15,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:32:15,148 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (omero.testlib: rename test_dir utility as create_managed_dir) c2c0e9f319dd87422afd281e0734c304636a4a27'
2025-06-05 00:32:15,170 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:32:15,173 [ scc.git] DEBUG src/omero/testlib/__init__.py | 4 ++--
2025-06-05 00:32:15,173 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-)
2025-06-05 00:32:15,384 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:15,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:32:15,569 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-05 00:32:15,608 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:32:15,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:32:15,610 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-05 00:32:15,650 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-05 00:32:15,656 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1edb14c250> has no local changes
2025-06-05 00:32:15,656 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
- PR 450 multimeric 'Add model stubs' (user: multimeric)
- PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 332 jburel 'Build conda'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 460 sbesson 'omero.testlib: rename test_dir utility as create_managed_dir'
Generated by OMERO-python-superbuild-push#432 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/432/)'
2025-06-05 00:32:15,663 [ scc.git] DEBUG [detached HEAD 11edec0a] merge master -Dorg -Ssuccess-only
2025-06-05 00:32:15,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-05 00:32:15,664 [ scc.git] INFO Overriding base-branch from master to develop
2025-06-05 00:32:15,664 [ scc.repo] DEBUG ## PRs found:
2025-06-05 00:32:15,820 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:16,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-06-05 00:32:16,415 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:16,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-06-05 00:32:16,911 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:17,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-06-05 00:32:17,407 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:17,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-06-05 00:32:17,941 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:18,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:18,470 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:18,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-05 00:32:18,986 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:19,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-06-05 00:32:19,525 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:19,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-06-05 00:32:19,709 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-06-05 00:32:19,960 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:20,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-06-05 00:32:20,479 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:20,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-06-05 00:32:20,973 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:21,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-06-05 00:32:21,513 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:21,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:21,965 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:22,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-06-05 00:32:22,478 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:22,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-06-05 00:32:22,685 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-06-05 00:32:22,936 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:23,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-06-05 00:32:23,448 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:23,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-06-05 00:32:23,995 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:24,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-06-05 00:32:24,486 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:24,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-06-05 00:32:24,770 [ scc.repo] DEBUG ## Branches found:
2025-06-05 00:32:24,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-06-05 00:32:24,771 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:32:24,771 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:32:24,774 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-06-05 00:32:24,776 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-05 00:32:24,776 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-06-05 00:32:24,779 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-06-05 00:32:24,782 [ scc.git] DEBUG Already up to date.
2025-06-05 00:32:24,782 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-06-05 00:32:25,122 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2025-06-05 00:32:25,122 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-06-05 00:32:25,126 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-06-05 00:32:25,415 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2025-06-05 00:32:25,415 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-06-05 00:32:25,420 [ scc.git] DEBUG ## Unique users: []
2025-06-05 00:32:25,420 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:32:25,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:32:25,422 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-06-05 00:32:25,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:32:25,430 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-06-05 00:32:25,439 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-06-05 00:32:25,440 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-06-05 00:32:25,440 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-06-05 00:32:25,443 [ scc.git] DEBUG Calling 'git reset --hard 950b28b31e228ae7b317cbd159235faf4023e4dc'
2025-06-05 00:32:25,447 [ scc.git] DEBUG HEAD is now at 950b28b Merge pull request #225 from will-moore/test_fixes
2025-06-05 00:32:25,448 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:25,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:32:25,646 [ scc.git] DEBUG Calling 'git merge-base 950b28b31e228ae7b317cbd159235faf4023e4dc 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-06-05 00:32:25,652 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..950b28b31e228ae7b317cbd159235faf4023e4dc'
2025-06-05 00:32:25,655 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#432](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/432/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/432/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-06-05 00:32:25,657 [ scc.config] DEBUG Found github.token
2025-06-05 00:32:25,658 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-06-05 00:32:25,658 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-06-05 00:32:25,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:32:25,664 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-06-05 00:32:25,674 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:32:25,677 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-06-05 00:32:25,677 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-06-05 00:32:25,897 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:26,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:32:26,059 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-05 00:32:26,098 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:32:26,098 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:32:26,100 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-05 00:32:26,138 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-05 00:32:26,142 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1edb678e10> has no local changes
2025-06-05 00:32:26,142 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#432 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/432/)'
2025-06-05 00:32:26,149 [ scc.git] DEBUG [detached HEAD 27be8c8] merge master -Dorg -Ssuccess-only
2025-06-05 00:32:26,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-05 00:32:26,149 [ scc.repo] DEBUG ## PRs found:
2025-06-05 00:32:26,310 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:26,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2025-06-05 00:32:27,028 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:27,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/621 HTTP/1.1" 200 None
2025-06-05 00:32:27,519 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:27,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956 HTTP/1.1" 200 None
2025-06-05 00:32:28,046 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:28,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:28,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:28,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-05 00:32:29,113 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:29,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956 HTTP/1.1" 200 None
2025-06-05 00:32:29,635 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:29,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1f6b7dc5e59341f99678864923ba89565ce27956?per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:30,083 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:30,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956 HTTP/1.1" 200 None
2025-06-05 00:32:30,547 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:30,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956/status HTTP/1.1" 200 None
2025-06-05 00:32:30,748 [ scc.repo] DEBUG - PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset'
2025-06-05 00:32:30,999 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:31,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None
2025-06-05 00:32:31,474 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:31,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None
2025-06-05 00:32:32,114 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:32,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:32,685 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:32,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-05 00:32:33,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:33,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None
2025-06-05 00:32:33,724 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:33,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:34,178 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:34,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None
2025-06-05 00:32:34,713 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:35,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None
2025-06-05 00:32:35,050 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins'
2025-06-05 00:32:35,301 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:35,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/617 HTTP/1.1" 200 None
2025-06-05 00:32:35,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:36,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/616 HTTP/1.1" 200 None
2025-06-05 00:32:36,293 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:36,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None
2025-06-05 00:32:36,863 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:37,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:37,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:37,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-05 00:32:37,915 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:38,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None
2025-06-05 00:32:38,452 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:38,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/c6401a8d78f907d300ef6a6bb673efa86374ecc4?per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:38,920 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:39,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None
2025-06-05 00:32:39,410 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:39,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/status HTTP/1.1" 200 None
2025-06-05 00:32:39,613 [ scc.repo] DEBUG - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-06-05 00:32:39,864 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:40,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614 HTTP/1.1" 200 None
2025-06-05 00:32:40,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:40,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614/comments HTTP/1.1" 200 None
2025-06-05 00:32:40,825 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:41,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None
2025-06-05 00:32:41,384 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:41,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:41,924 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:42,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-05 00:32:42,426 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:42,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None
2025-06-05 00:32:42,933 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:43,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/da14d11b161eb8aa90a6e4729758ea504d5914e3?per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:43,395 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:43,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None
2025-06-05 00:32:43,924 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:44,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/status HTTP/1.1" 200 None
2025-06-05 00:32:44,119 [ scc.repo] DEBUG - PR 614 sbesson 'CodeQL workflow updates'
2025-06-05 00:32:44,370 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:44,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None
2025-06-05 00:32:44,860 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:45,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None
2025-06-05 00:32:45,414 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:45,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None
2025-06-05 00:32:45,913 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:46,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:46,414 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:46,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-05 00:32:46,935 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:47,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None
2025-06-05 00:32:47,541 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:47,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/cca34cb278cac5fb8088df75cc4fe5f315810342?per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:48,031 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:48,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None
2025-06-05 00:32:48,532 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:48,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/status HTTP/1.1" 200 None
2025-06-05 00:32:48,731 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display'
2025-06-05 00:32:48,982 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:49,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None
2025-06-05 00:32:49,470 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:49,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None
2025-06-05 00:32:49,992 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:50,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-06-05 00:32:50,526 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:50,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:51,038 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:51,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-05 00:32:51,536 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:51,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-06-05 00:32:51,988 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:52,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:52,449 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:52,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-06-05 00:32:52,903 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:53,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None
2025-06-05 00:32:53,110 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2025-06-05 00:32:53,361 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:53,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2025-06-05 00:32:53,847 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:54,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2025-06-05 00:32:54,350 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:54,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-06-05 00:32:54,892 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:55,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:55,387 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:55,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-05 00:32:55,879 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:56,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-06-05 00:32:56,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:56,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:56,895 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:57,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-06-05 00:32:57,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:57,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2025-06-05 00:32:57,580 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf'
2025-06-05 00:32:57,831 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:58,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2025-06-05 00:32:58,320 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:58,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-06-05 00:32:58,852 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:59,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:32:59,316 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:32:59,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-05 00:32:59,853 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:00,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-06-05 00:33:00,480 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:00,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None
2025-06-05 00:33:00,989 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:01,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-06-05 00:33:01,487 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:01,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None
2025-06-05 00:33:01,694 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2025-06-05 00:33:01,945 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:02,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None
2025-06-05 00:33:02,451 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:02,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None
2025-06-05 00:33:02,928 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:03,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-06-05 00:33:03,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:03,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:33:03,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:04,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-05 00:33:04,505 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:04,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-06-05 00:33:05,149 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:05,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None
2025-06-05 00:33:05,620 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:05,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-06-05 00:33:06,103 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:06,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None
2025-06-05 00:33:06,605 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag'
2025-06-05 00:33:06,856 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:07,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None
2025-06-05 00:33:07,369 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:07,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None
2025-06-05 00:33:07,849 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:08,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-06-05 00:33:08,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:08,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:33:08,892 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:09,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-05 00:33:09,420 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:09,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-06-05 00:33:09,964 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:10,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None
2025-06-05 00:33:10,418 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:10,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-06-05 00:33:10,950 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:11,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None
2025-06-05 00:33:11,163 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters'
2025-06-05 00:33:11,414 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:11,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2025-06-05 00:33:11,957 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:12,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2025-06-05 00:33:12,445 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:12,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2025-06-05 00:33:12,965 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:13,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2025-06-05 00:33:13,455 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:13,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2025-06-05 00:33:13,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:14,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:33:14,442 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:14,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2025-06-05 00:33:15,023 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:15,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2
2025-06-05 00:33:15,236 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2025-06-05 00:33:15,487 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:15,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2025-06-05 00:33:16,062 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:16,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2025-06-05 00:33:16,575 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:16,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2025-06-05 00:33:17,079 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:17,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:33:17,560 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:17,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2025-06-05 00:33:18,079 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:18,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2
2025-06-05 00:33:18,273 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2025-06-05 00:33:18,524 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:18,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2025-06-05 00:33:19,003 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:19,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2025-06-05 00:33:19,534 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:19,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2025-06-05 00:33:20,055 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:20,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-05 00:33:20,569 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:20,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-05 00:33:20,806 [ scc.repo] DEBUG ## Branches found:
2025-06-05 00:33:20,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-06-05 00:33:20,806 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:33:20,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:33:20,809 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-05 00:33:20,812 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-05 00:33:20,812 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-05 00:33:20,815 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-05 00:33:20,818 [ scc.git] DEBUG Already up to date.
2025-06-05 00:33:20,818 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2025-06-05 00:33:21,131 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-05 00:33:21,131 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2025-06-05 00:33:21,135 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2025-06-05 00:33:21,443 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-05 00:33:21,443 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2025-06-05 00:33:21,447 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head'
2025-06-05 00:33:21,719 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-05 00:33:21,719 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD
2025-06-05 00:33:21,724 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head'
2025-06-05 00:33:21,987 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-05 00:33:21,987 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD
2025-06-05 00:33:21,991 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2025-06-05 00:33:22,272 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-05 00:33:22,272 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2025-06-05 00:33:22,277 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2025-06-05 00:33:22,560 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-05 00:33:22,560 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2025-06-05 00:33:22,564 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head'
2025-06-05 00:33:22,843 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-05 00:33:22,843 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD
2025-06-05 00:33:22,847 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head'
2025-06-05 00:33:23,105 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-05 00:33:23,105 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD
2025-06-05 00:33:23,110 [ scc.git] DEBUG Calling 'git fetch origin pull/614/head'
2025-06-05 00:33:23,387 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-05 00:33:23,387 [ scc.git] DEBUG * branch refs/pull/614/head -> FETCH_HEAD
2025-06-05 00:33:23,391 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head'
2025-06-05 00:33:23,667 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-05 00:33:23,667 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD
2025-06-05 00:33:23,671 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head'
2025-06-05 00:33:23,943 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-05 00:33:23,943 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD
2025-06-05 00:33:23,948 [ scc.git] DEBUG Calling 'git fetch origin pull/621/head'
2025-06-05 00:33:24,220 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-05 00:33:24,221 [ scc.git] DEBUG * branch refs/pull/621/head -> FETCH_HEAD
2025-06-05 00:33:24,225 [ scc.git] DEBUG ## Unique users: []
2025-06-05 00:33:24,225 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:33:24,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:33:24,227 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2025-06-05 00:33:24,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:33:24,238 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2025-06-05 00:33:24,258 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2025-06-05 00:33:24,258 [ scc.git] DEBUG Auto-merging setup.py
2025-06-05 00:33:24,259 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:33:24,263 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2025-06-05 00:33:24,263 [ scc.git] DEBUG setup.py | 1 +
2025-06-05 00:33:24,263 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2025-06-05 00:33:24,264 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:24,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:33:24,428 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2025-06-05 00:33:24,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:33:24,438 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2025-06-05 00:33:24,459 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2025-06-05 00:33:24,459 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2025-06-05 00:33:24,461 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:33:24,465 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2025-06-05 00:33:24,465 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2025-06-05 00:33:24,465 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2025-06-05 00:33:24,679 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:24,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:33:24,859 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb'
2025-06-05 00:33:24,867 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:33:24,870 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb'
2025-06-05 00:33:24,889 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:33:24,893 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +-
2025-06-05 00:33:24,893 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-06-05 00:33:25,110 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:25,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:33:25,274 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8'
2025-06-05 00:33:25,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:33:25,285 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8'
2025-06-05 00:33:25,306 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:33:25,310 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++--
2025-06-05 00:33:25,310 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2025-06-05 00:33:25,525 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:25,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:33:25,696 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539'
2025-06-05 00:33:25,704 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:33:25,706 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539'
2025-06-05 00:33:25,728 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:33:25,733 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2025-06-05 00:33:25,733 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2025-06-05 00:33:25,733 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++-
2025-06-05 00:33:25,733 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2025-06-05 00:33:25,733 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2025-06-05 00:33:25,733 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2025-06-05 00:33:25,733 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2025-06-05 00:33:25,733 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++-----
2025-06-05 00:33:25,733 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2025-06-05 00:33:25,733 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2025-06-05 00:33:25,733 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++--
2025-06-05 00:33:25,733 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-)
2025-06-05 00:33:25,947 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:26,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:33:26,115 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2025-06-05 00:33:26,123 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:33:26,125 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2025-06-05 00:33:26,151 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2025-06-05 00:33:26,152 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:33:26,159 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2025-06-05 00:33:26,159 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2025-06-05 00:33:26,159 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2025-06-05 00:33:26,159 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2025-06-05 00:33:26,366 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:26,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:33:26,559 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26'
2025-06-05 00:33:26,568 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:33:26,571 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26'
2025-06-05 00:33:26,593 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:33:26,597 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++
2025-06-05 00:33:26,597 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++----------
2025-06-05 00:33:26,597 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-)
2025-06-05 00:33:26,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:26,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:33:26,973 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cca34cb278cac5fb8088df75cc4fe5f315810342'
2025-06-05 00:33:26,981 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:33:26,984 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) cca34cb278cac5fb8088df75cc4fe5f315810342'
2025-06-05 00:33:27,005 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:33:27,010 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 20 ++++++++++++--
2025-06-05 00:33:27,010 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 +++++++++++++++-------
2025-06-05 00:33:27,010 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 ++
2025-06-05 00:33:27,010 [ scc.git] DEBUG 3 files changed, 42 insertions(+), 11 deletions(-)
2025-06-05 00:33:27,224 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:27,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:33:27,397 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da14d11b161eb8aa90a6e4729758ea504d5914e3'
2025-06-05 00:33:27,406 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:33:27,408 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 614 (CodeQL workflow updates) da14d11b161eb8aa90a6e4729758ea504d5914e3'
2025-06-05 00:33:27,427 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:33:27,430 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 55 +++++++----------------------------
2025-06-05 00:33:27,430 [ scc.git] DEBUG 1 file changed, 11 insertions(+), 44 deletions(-)
2025-06-05 00:33:27,648 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:27,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:33:27,802 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6401a8d78f907d300ef6a6bb673efa86374ecc4'
2025-06-05 00:33:27,811 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:33:27,813 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Use the release/v1 branch for the PyPA action publishing to PyPI) c6401a8d78f907d300ef6a6bb673efa86374ecc4'
2025-06-05 00:33:27,832 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:33:27,835 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-06-05 00:33:27,835 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-06-05 00:33:28,053 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:28,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:33:28,228 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac'
2025-06-05 00:33:28,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:33:28,238 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac'
2025-06-05 00:33:28,258 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2025-06-05 00:33:28,260 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:33:28,264 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++-----
2025-06-05 00:33:28,264 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-)
2025-06-05 00:33:28,479 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:28,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:33:28,644 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f6b7dc5e59341f99678864923ba89565ce27956'
2025-06-05 00:33:28,653 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:33:28,655 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 621 (/webgateway/original_file_paths: handle images without Fileset) 1f6b7dc5e59341f99678864923ba89565ce27956'
2025-06-05 00:33:28,675 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-05 00:33:28,680 [ scc.git] DEBUG omeroweb/webgateway/views.py | 2 ++
2025-06-05 00:33:28,680 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2025-06-05 00:33:28,895 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:29,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:33:29,067 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-05 00:33:29,106 [ scc.git] DEBUG Get sha1 of %s
2025-06-05 00:33:29,107 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-05 00:33:29,109 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-05 00:33:29,146 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-05 00:33:29,155 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1edb1fa810> has no local changes
2025-06-05 00:33:29,155 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 595 sukunis 'linkify supports urls that include {}[] characters'
- PR 596 sukunis 'Linkify can parse anchor tag'
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 613 will-moore 'externalInfo display'
- PR 614 sbesson 'CodeQL workflow updates'
- PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset'
Generated by OMERO-python-superbuild-push#432 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/432/)'
2025-06-05 00:33:29,164 [ scc.git] DEBUG [detached HEAD 7497efa45] merge master -Dorg -Ssuccess-only
2025-06-05 00:33:29,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-05 00:33:29,164 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-05 00:33:29,211 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2025-06-05 00:33:29,318 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:29,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:33:29,492 [ scc.config] DEBUG Found submodule.omero-marshal.url
2025-06-05 00:33:29,737 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:29,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:33:29,917 [ scc.config] DEBUG Found submodule.omero-py.url
2025-06-05 00:33:30,162 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:30,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:33:30,360 [ scc.config] DEBUG Found submodule.omero-scripts.url
2025-06-05 00:33:30,605 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:30,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:33:30,789 [ scc.config] DEBUG Found submodule.omero-web.url
2025-06-05 00:33:31,034 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-05 00:33:31,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-05 00:33:31,223 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-05 00:33:31,251 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1edd78e610> has local changes
2025-06-05 00:33:31,251 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`'
- PR 321 dependabot[bot] 'Bump omero-py from `e485be4` to `d2f8480`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
- PR 450 multimeric 'Add model stubs' (user: multimeric)
- PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 332 jburel 'Build conda'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 460 sbesson 'omero.testlib: rename test_dir utility as create_managed_dir'
Repository: ome/omero-scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 595 sukunis 'linkify supports urls that include {}[] characters'
- PR 596 sukunis 'Linkify can parse anchor tag'
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 613 will-moore 'externalInfo display'
- PR 614 sbesson 'CodeQL workflow updates'
- PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset'
Generated by OMERO-python-superbuild-push#432 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/432/)'
2025-06-05 00:33:31,258 [ scc.git] DEBUG [detached HEAD 3459b57] merge master -Dorg -Ssuccess-only
2025-06-05 00:33:31,258 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2025-06-05 00:33:31,259 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2025-06-05 00:33:31,259 [ scc.merge] INFO Already up to date.
2025-06-05 00:33:31,259 [ scc.merge] INFO
2025-06-05 00:33:31,259 [ scc.merge] INFO Merged PRs:
2025-06-05 00:33:31,259 [ scc.merge] INFO - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`'
2025-06-05 00:33:31,259 [ scc.merge] INFO - PR 321 dependabot[bot] 'Bump omero-py from `e485be4` to `d2f8480`'
2025-06-05 00:33:31,259 [ scc.merge] INFO
2025-06-05 00:33:31,259 [ scc.merge] INFO Repository: ome/omero-dropbox
2025-06-05 00:33:31,259 [ scc.merge] INFO Already up to date.
2025-06-05 00:33:31,259 [ scc.merge] INFO
2025-06-05 00:33:31,259 [ scc.merge] INFO Merged PRs:
2025-06-05 00:33:31,259 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2025-06-05 00:33:31,259 [ scc.merge] INFO
2025-06-05 00:33:31,259 [ scc.merge] INFO Repository: ome/omero-marshal
2025-06-05 00:33:31,259 [ scc.merge] INFO Excluded PRs:
2025-06-05 00:33:31,259 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2025-06-05 00:33:31,259 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2025-06-05 00:33:31,259 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2025-06-05 00:33:31,259 [ scc.merge] INFO Already up to date.
2025-06-05 00:33:31,259 [ scc.merge] INFO
2025-06-05 00:33:31,259 [ scc.merge] INFO Merged PRs:
2025-06-05 00:33:31,259 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2025-06-05 00:33:31,259 [ scc.merge] INFO
2025-06-05 00:33:31,259 [ scc.merge] INFO Repository: ome/omero-py
2025-06-05 00:33:31,259 [ scc.merge] INFO Excluded PRs:
2025-06-05 00:33:31,259 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
2025-06-05 00:33:31,259 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric)
2025-06-05 00:33:31,259 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
2025-06-05 00:33:31,259 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2025-06-05 00:33:31,259 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment)
2025-06-05 00:33:31,259 [ scc.merge] INFO Already up to date.
2025-06-05 00:33:31,259 [ scc.merge] INFO
2025-06-05 00:33:31,259 [ scc.merge] INFO Merged PRs:
2025-06-05 00:33:31,259 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 460 sbesson 'omero.testlib: rename test_dir utility as create_managed_dir'
2025-06-05 00:33:31,260 [ scc.merge] INFO
2025-06-05 00:33:31,260 [ scc.merge] INFO Repository: ome/omero-scripts
2025-06-05 00:33:31,260 [ scc.merge] INFO Excluded PRs:
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-06-05 00:33:31,260 [ scc.merge] INFO Already up to date.
2025-06-05 00:33:31,260 [ scc.merge] INFO
2025-06-05 00:33:31,260 [ scc.merge] INFO Merged PRs:
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-06-05 00:33:31,260 [ scc.merge] INFO
2025-06-05 00:33:31,260 [ scc.merge] INFO Conflicting PRs (not included):
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-06-05 00:33:31,260 [ scc.merge] INFO
2025-06-05 00:33:31,260 [ scc.merge] INFO Repository: ome/omero-web
2025-06-05 00:33:31,260 [ scc.merge] INFO Excluded PRs:
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2025-06-05 00:33:31,260 [ scc.merge] INFO Already up to date.
2025-06-05 00:33:31,260 [ scc.merge] INFO
2025-06-05 00:33:31,260 [ scc.merge] INFO Merged PRs:
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters'
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag'
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf'
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display'
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 614 sbesson 'CodeQL workflow updates'
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins'
2025-06-05 00:33:31,260 [ scc.merge] INFO - PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset'
2025-06-05 00:33:31,260 [ scc.merge] INFO
2025-06-05 00:33:31,261 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-06-05 00:33:31,261 [ scc.git] DEBUG Calling 'git remote'
2025-06-05 00:33:31,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-06-05 00:33:31,263 [ scc.git] DEBUG Calling 'git remote'
2025-06-05 00:33:31,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-05 00:33:31,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-06-05 00:33:31,265 [ scc.git] DEBUG Calling 'git remote'
2025-06-05 00:33:31,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-05 00:33:31,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-06-05 00:33:31,267 [ scc.git] DEBUG Calling 'git remote'
2025-06-05 00:33:31,269 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-05 00:33:31,269 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-06-05 00:33:31,269 [ scc.git] DEBUG Calling 'git remote'
2025-06-05 00:33:31,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-05 00:33:31,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-06-05 00:33:31,271 [ scc.git] DEBUG Calling 'git remote'
2025-06-05 00:33:31,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from 01fa0c5
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from 6d44f66
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from d2f84801
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 950b28b
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from c1b8fefc8
nothing to commit, working tree clean
HEAD detached from 155f8de
nothing to commit, working tree clean
2025-06-05 00:34:00,291 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS
![[Jenkins]](/jenkins/static/f2c3e7bc/images/svgs/logo.svg){kind=logo}
