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Full LogTestTestTestTestTestTestTestTestTestTestTestTestTest
Installing collected packages: pip
Attempting uninstall: pip
Found existing installation: pip 22.3.1
Uninstalling pip-22.3.1:
Successfully uninstalled pip-22.3.1
Successfully installed pip-25.1.1
+ python3.11 -m pip install scc
Collecting scc
Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
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Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
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Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
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Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
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Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.4.26 cffi-1.17.1 charset_normalizer-3.4.2 cryptography-45.0.4 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.4 ruamel.yaml-0.18.14 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.14.0 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-06-11 00:58:22,965 [ scc.config] DEBUG Found github.token
2025-06-11 00:58:22,967 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:23,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 00:58:23,402 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:23,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 00:58:23,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:23,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-06-11 00:58:23,987 [ scc.gh] DEBUG 4489 remaining from 5000 (Reset at 01:06
2025-06-11 00:58:23,991 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-11 00:58:23,996 [ scc.git] DEBUG Check current status
2025-06-11 00:58:23,996 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-11 00:58:24,002 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-11 00:58:24,006 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4
2025-06-11 00:58:24,182 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-06-11 00:58:24,507 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-06-11 00:58:27,087 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49)
2025-06-11 00:58:27,125 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b)
2025-06-11 00:58:27,133 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847)
2025-06-11 00:58:27,136 [ scc.config] DEBUG Found remote.origin.url
2025-06-11 00:58:27,138 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:27,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2025-06-11 00:58:27,672 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:27,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-11 00:58:28,141 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:28,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-11 00:58:28,566 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:28,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-11 00:58:28,995 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:29,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-11 00:58:29,202 [ scc.git] DEBUG Resetting...
2025-06-11 00:58:29,202 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-06-11 00:58:29,208 [ scc.git] DEBUG HEAD is now at 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4
2025-06-11 00:58:29,210 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-06-11 00:58:29,381 [ scc.git] DEBUG Check current status
2025-06-11 00:58:29,382 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-11 00:58:29,387 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4
2025-06-11 00:58:29,389 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-11 00:58:29,531 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-06-11 00:58:29,536 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-06-11 00:58:29,551 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49)
2025-06-11 00:58:29,564 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b)
2025-06-11 00:58:29,573 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847)
2025-06-11 00:58:29,574 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-06-11 00:58:29,574 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-06-11 00:58:29,574 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-06-11 00:58:29,574 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-06-11 00:58:29,574 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-06-11 00:58:29,574 [ scc.repo] DEBUG ## PRs found:
2025-06-11 00:58:29,576 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:29,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2025-06-11 00:58:30,103 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:30,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/321 HTTP/1.1" 200 None
2025-06-11 00:58:30,376 [ scc.repo] DEBUG # ... Include label: dependencies
2025-06-11 00:58:30,377 [ scc.repo] DEBUG - PR 321 dependabot[bot] 'Bump omero-py from `e485be4` to `d2f8480`'
2025-06-11 00:58:30,627 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:30,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/320 HTTP/1.1" 200 None
2025-06-11 00:58:30,866 [ scc.repo] DEBUG # ... Include label: dependencies
2025-06-11 00:58:30,866 [ scc.repo] DEBUG - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`'
2025-06-11 00:58:30,866 [ scc.repo] DEBUG ## Branches found:
2025-06-11 00:58:30,866 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 00:58:30,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:58:30,869 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-11 00:58:30,874 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-11 00:58:30,874 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-11 00:58:30,878 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-11 00:58:30,884 [ scc.git] DEBUG Already up to date.
2025-06-11 00:58:30,885 [ scc.git] DEBUG Calling 'git fetch origin pull/320/head'
2025-06-11 00:58:31,211 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2025-06-11 00:58:31,212 [ scc.git] DEBUG * branch refs/pull/320/head -> FETCH_HEAD
2025-06-11 00:58:31,219 [ scc.git] DEBUG Calling 'git fetch origin pull/321/head'
2025-06-11 00:58:31,543 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2025-06-11 00:58:31,543 [ scc.git] DEBUG * branch refs/pull/321/head -> FETCH_HEAD
2025-06-11 00:58:31,553 [ scc.git] DEBUG ## Unique users: []
2025-06-11 00:58:31,554 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 00:58:31,554 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:58:31,556 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a784439f1291b60e07536b5e1fccabf5d90baa1'
2025-06-11 00:58:31,566 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:58:31,568 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 320 (Bump omero-web from `4b979f8` to `c1b8fef`) 1a784439f1291b60e07536b5e1fccabf5d90baa1'
2025-06-11 00:58:31,586 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 00:58:31,592 [ scc.git] DEBUG omero-web | 2 +-
2025-06-11 00:58:31,592 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-06-11 00:58:31,594 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:31,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 00:58:31,771 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4f5878abfb25d73079eb6158b59e640fbbb28207'
2025-06-11 00:58:31,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:58:31,787 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 321 (Bump omero-py from `e485be4` to `d2f8480`) 4f5878abfb25d73079eb6158b59e640fbbb28207'
2025-06-11 00:58:31,803 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 00:58:31,807 [ scc.git] DEBUG omero-py | 2 +-
2025-06-11 00:58:31,807 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-06-11 00:58:32,022 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:32,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 00:58:32,183 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-11 00:58:32,532 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'd2f8480125bf0bda4e5663204366261a398266d2'
2025-06-11 00:58:32,961 [ scc.git] DEBUG Submodule path 'omero-web': checked out 'c1b8fefc872c1cadf5daba9476b405c59016abd5'
2025-06-11 00:58:32,962 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 00:58:32,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:58:32,965 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-11 00:58:33,502 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f28380810> has no local changes
2025-06-11 00:58:33,502 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`'
- PR 321 dependabot[bot] 'Bump omero-py from `e485be4` to `d2f8480`'
Generated by OMERO-python-superbuild-push#435 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/435/)'
2025-06-11 00:58:33,565 [ scc.git] DEBUG [detached HEAD d9f0d25] merge master -Dorg -Snone
2025-06-11 00:58:33,565 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2025-06-11 00:58:33,565 [ scc.merge] INFO Already up to date.
2025-06-11 00:58:33,565 [ scc.merge] INFO
2025-06-11 00:58:33,565 [ scc.merge] INFO Merged PRs:
2025-06-11 00:58:33,566 [ scc.merge] INFO - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`'
2025-06-11 00:58:33,566 [ scc.merge] INFO - PR 321 dependabot[bot] 'Bump omero-py from `e485be4` to `d2f8480`'
2025-06-11 00:58:33,566 [ scc.merge] INFO
2025-06-11 00:58:33,566 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-06-11 00:58:33,566 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2025-06-11 00:58:35,971 [ scc.config] DEBUG Found github.token
2025-06-11 00:58:35,973 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:36,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 00:58:36,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:36,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 00:58:36,793 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:36,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-06-11 00:58:36,960 [ scc.gh] DEBUG 4445 remaining from 5000 (Reset at 01:06
2025-06-11 00:58:36,964 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-11 00:58:36,969 [ scc.git] DEBUG Check current status
2025-06-11 00:58:36,969 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-11 00:58:36,976 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-11 00:58:36,976 [ scc.git] DEBUG d9f0d25 merge master -Dorg -Snone
2025-06-11 00:58:37,109 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-06-11 00:58:37,117 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-06-11 00:58:37,193 [ scc.git] DEBUG d2f8480125bf0bda4e5663204366261a398266d2 omero-py (v5.20.0-16-gd2f84801)
2025-06-11 00:58:37,202 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b)
2025-06-11 00:58:37,276 [ scc.git] DEBUG c1b8fefc872c1cadf5daba9476b405c59016abd5 omero-web (v5.29.0-5-gc1b8fefc8)
2025-06-11 00:58:37,279 [ scc.config] DEBUG Found remote.origin.url
2025-06-11 00:58:37,279 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2025-06-11 00:58:37,281 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2025-06-11 00:58:37,283 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:37,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2025-06-11 00:58:37,826 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:38,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-11 00:58:38,316 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:38,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-11 00:58:38,739 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:38,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-11 00:58:39,188 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:39,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-11 00:58:39,379 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-11 00:58:39,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-06-11 00:58:39,546 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-11 00:58:39,552 [ scc.git] DEBUG Check current status
2025-06-11 00:58:39,552 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-11 00:58:39,558 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build
2025-06-11 00:58:39,559 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-11 00:58:39,684 [ scc.config] DEBUG Found remote.origin.url
2025-06-11 00:58:39,686 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:39,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2025-06-11 00:58:40,233 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:40,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-11 00:58:40,743 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:40,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-11 00:58:41,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:41,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-11 00:58:41,621 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:41,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-11 00:58:41,798 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-11 00:58:41,916 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-11 00:58:41,924 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-06-11 00:58:41,924 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-11 00:58:41,932 [ scc.git] DEBUG Check current status
2025-06-11 00:58:41,933 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-11 00:58:41,938 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build
2025-06-11 00:58:41,940 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-11 00:58:42,079 [ scc.config] DEBUG Found remote.origin.url
2025-06-11 00:58:42,080 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:42,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2025-06-11 00:58:42,623 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:42,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-11 00:58:43,095 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:43,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-11 00:58:43,532 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:43,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-11 00:58:43,982 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:44,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-11 00:58:44,154 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-11 00:58:44,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-11 00:58:44,269 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-06-11 00:58:44,269 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-11 00:58:44,274 [ scc.git] DEBUG Check current status
2025-06-11 00:58:44,274 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-11 00:58:44,280 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-11 00:58:44,280 [ scc.git] DEBUG d2f84801 Merge pull request #453 from will-moore/externalInfo
2025-06-11 00:58:44,405 [ scc.config] DEBUG Found remote.origin.url
2025-06-11 00:58:44,407 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:44,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2025-06-11 00:58:44,925 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:45,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-11 00:58:45,436 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:45,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-11 00:58:45,867 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:46,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-11 00:58:46,317 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:46,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-11 00:58:46,499 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-11 00:58:46,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-11 00:58:46,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-06-11 00:58:46,628 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-11 00:58:46,635 [ scc.git] DEBUG Check current status
2025-06-11 00:58:46,635 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-11 00:58:46,639 [ scc.git] DEBUG 950b28b Merge pull request #225 from will-moore/test_fixes
2025-06-11 00:58:46,640 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-11 00:58:46,775 [ scc.config] DEBUG Found remote.origin.url
2025-06-11 00:58:46,776 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2025-06-11 00:58:46,777 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:47,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2025-06-11 00:58:47,299 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:47,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-11 00:58:47,811 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:48,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-11 00:58:48,255 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:48,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-11 00:58:48,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:48,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-11 00:58:48,873 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-11 00:58:49,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-11 00:58:49,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-06-11 00:58:49,011 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-11 00:58:49,018 [ scc.git] DEBUG Check current status
2025-06-11 00:58:49,018 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-11 00:58:49,026 [ scc.git] DEBUG c1b8fefc8 Merge pull request #606 from knabar/fix-large-channel-count
2025-06-11 00:58:49,029 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-11 00:58:49,147 [ scc.config] DEBUG Found remote.origin.url
2025-06-11 00:58:49,149 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:49,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2025-06-11 00:58:49,727 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:49,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-11 00:58:50,196 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:50,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-11 00:58:50,627 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:50,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-11 00:58:51,062 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:51,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-11 00:58:51,247 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-11 00:58:51,364 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-11 00:58:51,364 [ scc.git] DEBUG Resetting...
2025-06-11 00:58:51,364 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-06-11 00:58:51,373 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-06-11 00:58:51,377 [ scc.git] DEBUG HEAD is now at d9f0d25 merge master -Dorg -Snone
2025-06-11 00:58:51,532 [ scc.git] DEBUG Check current status
2025-06-11 00:58:51,533 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-11 00:58:51,538 [ scc.git] DEBUG d9f0d25 merge master -Dorg -Snone
2025-06-11 00:58:51,540 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-11 00:58:51,667 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-06-11 00:58:51,677 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-06-11 00:58:51,691 [ scc.git] DEBUG d2f8480125bf0bda4e5663204366261a398266d2 omero-py (v5.20.0-16-gd2f84801)
2025-06-11 00:58:51,701 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b)
2025-06-11 00:58:51,707 [ scc.git] DEBUG c1b8fefc872c1cadf5daba9476b405c59016abd5 omero-web (v5.29.0-5-gc1b8fefc8)
2025-06-11 00:58:51,711 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-06-11 00:58:51,711 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-06-11 00:58:51,711 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-06-11 00:58:51,711 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-06-11 00:58:51,711 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-06-11 00:58:51,711 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-06-11 00:58:51,711 [ scc.repo] DEBUG ## PRs found:
2025-06-11 00:58:51,713 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:52,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2025-06-11 00:58:52,252 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:52,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/321 HTTP/1.1" 200 None
2025-06-11 00:58:52,494 [ scc.repo] DEBUG # ... Include label: dependencies
2025-06-11 00:58:52,745 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:53,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/4f5878abfb25d73079eb6158b59e640fbbb28207 HTTP/1.1" 200 None
2025-06-11 00:58:53,292 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:53,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/4f5878abfb25d73079eb6158b59e640fbbb28207/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 00:58:53,777 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:54,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/4f5878abfb25d73079eb6158b59e640fbbb28207 HTTP/1.1" 200 None
2025-06-11 00:58:54,346 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:54,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/4f5878abfb25d73079eb6158b59e640fbbb28207?per_page=1 HTTP/1.1" 200 2
2025-06-11 00:58:54,542 [ scc.repo] DEBUG - PR 321 dependabot[bot] 'Bump omero-py from `e485be4` to `d2f8480`'
2025-06-11 00:58:54,793 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:55,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/320 HTTP/1.1" 200 None
2025-06-11 00:58:55,047 [ scc.repo] DEBUG # ... Include label: dependencies
2025-06-11 00:58:55,298 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:55,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/1a784439f1291b60e07536b5e1fccabf5d90baa1 HTTP/1.1" 200 None
2025-06-11 00:58:55,845 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:56,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/1a784439f1291b60e07536b5e1fccabf5d90baa1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 00:58:56,345 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:56,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/1a784439f1291b60e07536b5e1fccabf5d90baa1 HTTP/1.1" 200 None
2025-06-11 00:58:56,830 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:57,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/1a784439f1291b60e07536b5e1fccabf5d90baa1?per_page=1 HTTP/1.1" 200 2
2025-06-11 00:58:57,005 [ scc.repo] DEBUG - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`'
2025-06-11 00:58:57,005 [ scc.repo] DEBUG ## Branches found:
2025-06-11 00:58:57,005 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 00:58:57,005 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:58:57,009 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-11 00:58:57,015 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-11 00:58:57,015 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-11 00:58:57,019 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-11 00:58:57,023 [ scc.git] DEBUG Already up to date.
2025-06-11 00:58:57,023 [ scc.git] DEBUG Calling 'git fetch origin pull/320/head'
2025-06-11 00:58:57,375 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2025-06-11 00:58:57,375 [ scc.git] DEBUG * branch refs/pull/320/head -> FETCH_HEAD
2025-06-11 00:58:57,385 [ scc.git] DEBUG Calling 'git fetch origin pull/321/head'
2025-06-11 00:58:57,686 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2025-06-11 00:58:57,686 [ scc.git] DEBUG * branch refs/pull/321/head -> FETCH_HEAD
2025-06-11 00:58:57,696 [ scc.git] DEBUG ## Unique users: []
2025-06-11 00:58:57,696 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 00:58:57,697 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:58:57,705 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a784439f1291b60e07536b5e1fccabf5d90baa1'
2025-06-11 00:58:57,712 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:58:57,720 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 320 (Bump omero-web from `4b979f8` to `c1b8fef`) 1a784439f1291b60e07536b5e1fccabf5d90baa1'
2025-06-11 00:58:57,726 [ scc.git] DEBUG Already up to date.
2025-06-11 00:58:57,727 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:57,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 00:58:57,904 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4f5878abfb25d73079eb6158b59e640fbbb28207'
2025-06-11 00:58:57,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:58:57,916 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 321 (Bump omero-py from `e485be4` to `d2f8480`) 4f5878abfb25d73079eb6158b59e640fbbb28207'
2025-06-11 00:58:57,921 [ scc.git] DEBUG Already up to date.
2025-06-11 00:58:58,155 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:58,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 00:58:58,316 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-11 00:58:58,450 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 00:58:58,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:58:58,457 [ scc.repo] DEBUG ## PRs found:
2025-06-11 00:58:58,567 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:58,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2025-06-11 00:58:59,096 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:59,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2025-06-11 00:58:59,584 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:58:59,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2025-06-11 00:59:00,114 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:00,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2025-06-11 00:59:00,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:00,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 00:59:01,140 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:01,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2025-06-11 00:59:01,679 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:01,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2025-06-11 00:59:01,892 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2025-06-11 00:59:01,892 [ scc.repo] DEBUG ## Branches found:
2025-06-11 00:59:01,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-06-11 00:59:01,893 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 00:59:01,893 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:01,896 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-11 00:59:01,903 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-11 00:59:01,903 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-11 00:59:01,911 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-11 00:59:01,916 [ scc.git] DEBUG Already up to date.
2025-06-11 00:59:01,916 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2025-06-11 00:59:02,311 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2025-06-11 00:59:02,311 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2025-06-11 00:59:02,319 [ scc.git] DEBUG ## Unique users: []
2025-06-11 00:59:02,319 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 00:59:02,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:02,322 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2025-06-11 00:59:02,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:02,332 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2025-06-11 00:59:02,514 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2025-06-11 00:59:02,514 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2025-06-11 00:59:02,514 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2025-06-11 00:59:02,514 [ scc.git] DEBUG Auto-merging src/fsLists.py
2025-06-11 00:59:02,514 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2025-06-11 00:59:02,514 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2025-06-11 00:59:02,514 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2025-06-11 00:59:02,514 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2025-06-11 00:59:02,514 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2025-06-11 00:59:02,518 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 00:59:02,526 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2025-06-11 00:59:02,526 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2025-06-11 00:59:02,526 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2025-06-11 00:59:02,526 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2025-06-11 00:59:02,526 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2025-06-11 00:59:02,526 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2025-06-11 00:59:02,526 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2025-06-11 00:59:02,526 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2025-06-11 00:59:02,526 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2025-06-11 00:59:02,526 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2025-06-11 00:59:02,528 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:02,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 00:59:02,697 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-11 00:59:02,819 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 00:59:02,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:02,823 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-11 00:59:02,946 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-11 00:59:02,956 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3b7c25310> has no local changes
2025-06-11 00:59:02,957 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#435 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/435/)'
2025-06-11 00:59:02,973 [ scc.git] DEBUG [detached HEAD 5634bdf] merge master -Dorg -Ssuccess-only
2025-06-11 00:59:02,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-11 00:59:02,975 [ scc.repo] DEBUG ## PRs found:
2025-06-11 00:59:02,976 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:03,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2025-06-11 00:59:03,549 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:03,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2025-06-11 00:59:04,029 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:04,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2025-06-11 00:59:04,488 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:04,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2025-06-11 00:59:05,008 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:05,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2025-06-11 00:59:05,508 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:05,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2025-06-11 00:59:06,081 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:06,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 00:59:06,577 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:06,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2025-06-11 00:59:07,163 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:07,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2025-06-11 00:59:07,360 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2025-06-11 00:59:07,611 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:07,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2025-06-11 00:59:08,102 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:08,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2025-06-11 00:59:08,607 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:08,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2025-06-11 00:59:09,123 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:09,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2025-06-11 00:59:09,326 [ scc.repo] DEBUG ## Branches found:
2025-06-11 00:59:09,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-06-11 00:59:09,326 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 00:59:09,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:09,330 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-11 00:59:09,334 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-11 00:59:09,334 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-11 00:59:09,338 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-11 00:59:09,343 [ scc.git] DEBUG Already up to date.
2025-06-11 00:59:09,343 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2025-06-11 00:59:09,741 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2025-06-11 00:59:09,742 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2025-06-11 00:59:09,749 [ scc.git] DEBUG ## Unique users: []
2025-06-11 00:59:09,749 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 00:59:09,749 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:09,756 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2025-06-11 00:59:09,765 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:09,772 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2025-06-11 00:59:09,792 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2025-06-11 00:59:09,812 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 00:59:09,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:09,821 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2025-06-11 00:59:09,821 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2025-06-11 00:59:09,821 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2025-06-11 00:59:09,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 00:59:09,979 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-11 00:59:10,088 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 00:59:10,089 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:10,093 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-11 00:59:10,222 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-11 00:59:10,231 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3b8d29ad0> has no local changes
2025-06-11 00:59:10,232 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#435 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/435/)'
2025-06-11 00:59:10,242 [ scc.git] DEBUG [detached HEAD 9868829] merge master -Dorg -Ssuccess-only
2025-06-11 00:59:10,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-11 00:59:10,243 [ scc.repo] DEBUG ## PRs found:
2025-06-11 00:59:10,244 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:10,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2025-06-11 00:59:10,896 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:11,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/460 HTTP/1.1" 200 None
2025-06-11 00:59:11,390 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:11,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/460/comments HTTP/1.1" 200 None
2025-06-11 00:59:11,886 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:12,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2c0e9f319dd87422afd281e0734c304636a4a27 HTTP/1.1" 200 None
2025-06-11 00:59:12,414 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:12,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2c0e9f319dd87422afd281e0734c304636a4a27/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 00:59:12,916 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:13,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2c0e9f319dd87422afd281e0734c304636a4a27/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-11 00:59:13,443 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:13,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2c0e9f319dd87422afd281e0734c304636a4a27 HTTP/1.1" 200 None
2025-06-11 00:59:13,963 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:14,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c2c0e9f319dd87422afd281e0734c304636a4a27?per_page=1 HTTP/1.1" 200 None
2025-06-11 00:59:14,425 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:14,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2c0e9f319dd87422afd281e0734c304636a4a27 HTTP/1.1" 200 None
2025-06-11 00:59:14,899 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:15,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2c0e9f319dd87422afd281e0734c304636a4a27/status HTTP/1.1" 200 None
2025-06-11 00:59:15,098 [ scc.repo] DEBUG - PR 460 sbesson 'omero.testlib: rename test_dir utility as create_managed_dir'
2025-06-11 00:59:15,349 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:15,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None
2025-06-11 00:59:15,826 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:16,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None
2025-06-11 00:59:16,336 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:16,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None
2025-06-11 00:59:16,834 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:17,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None
2025-06-11 00:59:17,323 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:17,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None
2025-06-11 00:59:17,585 [ scc.repo] DEBUG # ... Exclude label: exclude
2025-06-11 00:59:17,836 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:18,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2025-06-11 00:59:18,315 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:18,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2025-06-11 00:59:18,782 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:19,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2025-06-11 00:59:19,311 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:19,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 00:59:19,808 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:20,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-11 00:59:20,309 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:20,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2025-06-11 00:59:20,861 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:21,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2025-06-11 00:59:21,290 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:21,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2025-06-11 00:59:21,791 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:22,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2025-06-11 00:59:22,002 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2025-06-11 00:59:22,253 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:22,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2025-06-11 00:59:22,760 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:22,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2025-06-11 00:59:23,245 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:23,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2025-06-11 00:59:23,769 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:24,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 00:59:24,294 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:24,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-11 00:59:24,786 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:25,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2025-06-11 00:59:25,298 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:25,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None
2025-06-11 00:59:25,762 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:26,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2025-06-11 00:59:26,281 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:26,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 00:59:26,736 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:26,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2025-06-11 00:59:27,251 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:27,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2025-06-11 00:59:27,444 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2025-06-11 00:59:27,696 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:27,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2025-06-11 00:59:28,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:28,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2025-06-11 00:59:28,673 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:28,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2025-06-11 00:59:29,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:29,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 00:59:29,704 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:29,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2025-06-11 00:59:30,214 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:30,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2
2025-06-11 00:59:30,420 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2025-06-11 00:59:30,672 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:30,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2025-06-11 00:59:31,160 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:31,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2025-06-11 00:59:31,664 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:31,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2025-06-11 00:59:32,137 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:32,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2025-06-11 00:59:32,667 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:32,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2025-06-11 00:59:33,187 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:33,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 00:59:33,719 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:34,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2025-06-11 00:59:34,254 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:34,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2025-06-11 00:59:34,430 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2025-06-11 00:59:34,431 [ scc.repo] DEBUG ## Branches found:
2025-06-11 00:59:34,431 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-06-11 00:59:34,431 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 00:59:34,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:34,435 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-11 00:59:34,440 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-11 00:59:34,440 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-11 00:59:34,448 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-11 00:59:34,456 [ scc.git] DEBUG Already up to date.
2025-06-11 00:59:34,457 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2025-06-11 00:59:34,834 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-11 00:59:34,834 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2025-06-11 00:59:34,840 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2025-06-11 00:59:35,209 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-11 00:59:35,210 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2025-06-11 00:59:35,215 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2025-06-11 00:59:35,525 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-11 00:59:35,526 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2025-06-11 00:59:35,531 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2025-06-11 00:59:35,827 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-11 00:59:35,827 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2025-06-11 00:59:35,835 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2025-06-11 00:59:36,457 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-11 00:59:36,457 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2025-06-11 00:59:36,463 [ scc.git] DEBUG ## Unique users: []
2025-06-11 00:59:36,463 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 00:59:36,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:36,467 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2025-06-11 00:59:36,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:36,494 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2025-06-11 00:59:36,610 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2025-06-11 00:59:36,610 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2025-06-11 00:59:36,612 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 00:59:36,620 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2025-06-11 00:59:36,620 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2025-06-11 00:59:36,620 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2025-06-11 00:59:36,623 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:36,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 00:59:36,809 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2025-06-11 00:59:36,826 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:36,830 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2025-06-11 00:59:36,875 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 00:59:36,881 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2025-06-11 00:59:36,881 [ scc.git] DEBUG connect.py | 11 +++++++++++
2025-06-11 00:59:36,881 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2025-06-11 00:59:36,882 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2025-06-11 00:59:36,882 [ scc.git] DEBUG create mode 100644 connect.py
2025-06-11 00:59:37,060 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:37,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 00:59:37,224 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2025-06-11 00:59:37,241 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:37,244 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2025-06-11 00:59:37,309 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2025-06-11 00:59:37,311 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 00:59:37,319 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2025-06-11 00:59:37,319 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2025-06-11 00:59:37,475 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:37,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 00:59:37,643 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2025-06-11 00:59:37,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:37,665 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2025-06-11 00:59:37,926 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2025-06-11 00:59:37,927 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 00:59:37,939 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2025-06-11 00:59:37,939 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2025-06-11 00:59:37,942 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:38,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 00:59:38,131 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c2c0e9f319dd87422afd281e0734c304636a4a27'
2025-06-11 00:59:38,148 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:38,152 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (omero.testlib: rename test_dir utility as create_managed_dir) c2c0e9f319dd87422afd281e0734c304636a4a27'
2025-06-11 00:59:38,182 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 00:59:38,188 [ scc.git] DEBUG src/omero/testlib/__init__.py | 4 ++--
2025-06-11 00:59:38,188 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-)
2025-06-11 00:59:38,382 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:38,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 00:59:38,555 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-11 00:59:38,680 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 00:59:38,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:38,687 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-11 00:59:38,825 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-11 00:59:38,835 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3b7dd9410> has no local changes
2025-06-11 00:59:38,835 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
- PR 450 multimeric 'Add model stubs' (user: multimeric)
- PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 332 jburel 'Build conda'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 460 sbesson 'omero.testlib: rename test_dir utility as create_managed_dir'
Generated by OMERO-python-superbuild-push#435 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/435/)'
2025-06-11 00:59:38,855 [ scc.git] DEBUG [detached HEAD 9e38b9a3] merge master -Dorg -Ssuccess-only
2025-06-11 00:59:38,856 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-11 00:59:38,857 [ scc.git] INFO Overriding base-branch from master to develop
2025-06-11 00:59:38,857 [ scc.repo] DEBUG ## PRs found:
2025-06-11 00:59:38,858 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:39,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-06-11 00:59:39,450 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:39,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-06-11 00:59:39,917 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:40,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-06-11 00:59:40,396 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:40,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-06-11 00:59:40,943 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:41,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 00:59:41,474 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:41,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-11 00:59:41,964 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:42,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-06-11 00:59:42,522 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:42,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-06-11 00:59:42,721 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-06-11 00:59:42,972 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:43,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-06-11 00:59:43,551 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:43,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-06-11 00:59:44,013 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:44,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-06-11 00:59:44,544 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:44,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 00:59:45,038 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:45,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-06-11 00:59:45,554 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:45,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-06-11 00:59:45,736 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-06-11 00:59:45,988 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:46,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-06-11 00:59:46,486 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:46,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-06-11 00:59:47,027 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:47,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-06-11 00:59:47,502 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:47,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-06-11 00:59:47,770 [ scc.repo] DEBUG ## Branches found:
2025-06-11 00:59:47,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-06-11 00:59:47,770 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 00:59:47,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:47,774 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-06-11 00:59:47,782 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-11 00:59:47,782 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-06-11 00:59:47,791 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-06-11 00:59:47,800 [ scc.git] DEBUG Already up to date.
2025-06-11 00:59:47,801 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-06-11 00:59:48,323 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2025-06-11 00:59:48,323 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-06-11 00:59:48,329 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-06-11 00:59:48,899 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2025-06-11 00:59:48,899 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-06-11 00:59:48,905 [ scc.git] DEBUG ## Unique users: []
2025-06-11 00:59:48,906 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 00:59:48,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:48,910 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-06-11 00:59:48,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:48,922 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-06-11 00:59:49,207 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-06-11 00:59:49,207 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-06-11 00:59:49,208 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-06-11 00:59:49,212 [ scc.git] DEBUG Calling 'git reset --hard 950b28b31e228ae7b317cbd159235faf4023e4dc'
2025-06-11 00:59:49,218 [ scc.git] DEBUG HEAD is now at 950b28b Merge pull request #225 from will-moore/test_fixes
2025-06-11 00:59:49,221 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:49,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 00:59:49,396 [ scc.git] DEBUG Calling 'git merge-base 950b28b31e228ae7b317cbd159235faf4023e4dc 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-06-11 00:59:49,404 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..950b28b31e228ae7b317cbd159235faf4023e4dc'
2025-06-11 00:59:49,410 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#435](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/435/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/435/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-06-11 00:59:49,413 [ scc.config] DEBUG Found github.token
2025-06-11 00:59:49,413 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-06-11 00:59:49,413 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-06-11 00:59:49,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:49,427 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-06-11 00:59:49,444 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 00:59:49,452 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-06-11 00:59:49,452 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-06-11 00:59:49,647 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:49,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 00:59:49,815 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-11 00:59:49,944 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 00:59:49,945 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 00:59:49,951 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-11 00:59:50,081 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-11 00:59:50,089 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ba687e50> has no local changes
2025-06-11 00:59:50,090 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#435 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/435/)'
2025-06-11 00:59:50,106 [ scc.git] DEBUG [detached HEAD d505601] merge master -Dorg -Ssuccess-only
2025-06-11 00:59:50,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-11 00:59:50,107 [ scc.repo] DEBUG ## PRs found:
2025-06-11 00:59:50,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:50,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2025-06-11 00:59:50,813 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:51,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/621 HTTP/1.1" 200 None
2025-06-11 00:59:51,340 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:51,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956 HTTP/1.1" 200 None
2025-06-11 00:59:51,875 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:52,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 00:59:52,374 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:52,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-11 00:59:52,894 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:53,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956 HTTP/1.1" 200 None
2025-06-11 00:59:53,404 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:53,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1f6b7dc5e59341f99678864923ba89565ce27956?per_page=1 HTTP/1.1" 200 None
2025-06-11 00:59:53,868 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:54,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956 HTTP/1.1" 200 None
2025-06-11 00:59:54,399 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:54,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956/status HTTP/1.1" 200 None
2025-06-11 00:59:54,596 [ scc.repo] DEBUG - PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset'
2025-06-11 00:59:54,846 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:55,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None
2025-06-11 00:59:55,331 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:55,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None
2025-06-11 00:59:55,902 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:56,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 00:59:56,409 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:56,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-11 00:59:56,911 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:57,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None
2025-06-11 00:59:57,379 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:57,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None
2025-06-11 00:59:57,845 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:58,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None
2025-06-11 00:59:58,305 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:58,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None
2025-06-11 00:59:58,552 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins'
2025-06-11 00:59:58,803 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:59,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/617 HTTP/1.1" 200 None
2025-06-11 00:59:59,298 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 00:59:59,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/616 HTTP/1.1" 200 None
2025-06-11 00:59:59,802 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:00,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None
2025-06-11 01:00:00,340 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:00,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:00,894 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:01,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-11 01:00:01,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:01,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None
2025-06-11 01:00:01,904 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:02,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/c6401a8d78f907d300ef6a6bb673efa86374ecc4?per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:02,377 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:02,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None
2025-06-11 01:00:02,885 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:03,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/status HTTP/1.1" 200 None
2025-06-11 01:00:03,083 [ scc.repo] DEBUG - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-06-11 01:00:03,334 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:03,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614 HTTP/1.1" 200 None
2025-06-11 01:00:03,838 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:04,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614/comments HTTP/1.1" 200 None
2025-06-11 01:00:04,322 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:04,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None
2025-06-11 01:00:04,864 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:05,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:05,391 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:05,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-11 01:00:05,899 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:06,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None
2025-06-11 01:00:06,346 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:06,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/da14d11b161eb8aa90a6e4729758ea504d5914e3?per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:06,791 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:07,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None
2025-06-11 01:00:07,258 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:07,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/status HTTP/1.1" 200 None
2025-06-11 01:00:07,450 [ scc.repo] DEBUG - PR 614 sbesson 'CodeQL workflow updates'
2025-06-11 01:00:07,701 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:07,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None
2025-06-11 01:00:08,203 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:08,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None
2025-06-11 01:00:08,756 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:09,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None
2025-06-11 01:00:09,335 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:09,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:09,836 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:10,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-11 01:00:10,439 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:10,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None
2025-06-11 01:00:11,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:11,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/cca34cb278cac5fb8088df75cc4fe5f315810342?per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:11,540 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:11,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None
2025-06-11 01:00:11,995 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:12,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/status HTTP/1.1" 200 None
2025-06-11 01:00:12,191 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display'
2025-06-11 01:00:12,442 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:12,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None
2025-06-11 01:00:12,913 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:13,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None
2025-06-11 01:00:13,437 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:13,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-06-11 01:00:13,948 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:14,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:14,466 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:14,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-11 01:00:14,939 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:15,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-06-11 01:00:15,482 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:15,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:15,940 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:16,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-06-11 01:00:16,473 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:16,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None
2025-06-11 01:00:16,684 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2025-06-11 01:00:16,934 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:17,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2025-06-11 01:00:17,431 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:17,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2025-06-11 01:00:17,938 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:18,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-06-11 01:00:18,545 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:18,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:19,065 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:19,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-11 01:00:19,582 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:19,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-06-11 01:00:20,097 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:20,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:20,572 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:20,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-06-11 01:00:21,050 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:21,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2025-06-11 01:00:21,265 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf'
2025-06-11 01:00:21,516 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:21,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2025-06-11 01:00:21,996 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:22,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-06-11 01:00:22,569 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:22,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:23,079 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:23,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-11 01:00:23,614 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:23,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-06-11 01:00:24,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:24,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:24,516 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:24,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-06-11 01:00:25,051 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:25,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None
2025-06-11 01:00:25,262 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2025-06-11 01:00:25,513 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:25,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None
2025-06-11 01:00:25,994 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:26,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None
2025-06-11 01:00:26,496 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:26,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-06-11 01:00:27,008 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:27,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:27,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:27,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-11 01:00:27,990 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:28,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-06-11 01:00:28,541 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:28,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:28,995 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:29,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-06-11 01:00:29,487 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:29,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None
2025-06-11 01:00:29,724 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag'
2025-06-11 01:00:29,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:30,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None
2025-06-11 01:00:30,455 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:30,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None
2025-06-11 01:00:30,924 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:31,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-06-11 01:00:31,445 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:31,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:31,959 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:32,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-11 01:00:32,476 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:32,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-06-11 01:00:32,932 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:33,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:33,369 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:33,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-06-11 01:00:33,915 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:34,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None
2025-06-11 01:00:34,108 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters'
2025-06-11 01:00:34,359 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:34,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2025-06-11 01:00:34,855 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:35,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2025-06-11 01:00:35,349 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:35,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2025-06-11 01:00:35,833 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:36,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2025-06-11 01:00:36,353 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:36,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2025-06-11 01:00:36,931 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:37,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:37,395 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:37,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2025-06-11 01:00:37,930 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:38,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2
2025-06-11 01:00:38,122 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2025-06-11 01:00:38,373 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:38,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2025-06-11 01:00:38,879 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:39,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2025-06-11 01:00:39,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:39,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2025-06-11 01:00:39,922 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:40,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:40,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:40,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2025-06-11 01:00:40,872 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:41,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2
2025-06-11 01:00:41,045 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2025-06-11 01:00:41,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:41,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2025-06-11 01:00:41,800 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:42,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2025-06-11 01:00:42,315 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:42,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2025-06-11 01:00:42,829 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:43,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-11 01:00:43,340 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:43,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-11 01:00:43,617 [ scc.repo] DEBUG ## Branches found:
2025-06-11 01:00:43,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-06-11 01:00:43,618 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 01:00:43,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 01:00:43,623 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-11 01:00:43,630 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-11 01:00:43,630 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-11 01:00:43,638 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-11 01:00:43,645 [ scc.git] DEBUG Already up to date.
2025-06-11 01:00:43,646 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2025-06-11 01:00:45,914 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-11 01:00:45,914 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2025-06-11 01:00:45,925 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2025-06-11 01:00:46,312 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-11 01:00:46,312 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2025-06-11 01:00:46,320 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head'
2025-06-11 01:00:47,423 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-11 01:00:47,424 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD
2025-06-11 01:00:47,430 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head'
2025-06-11 01:00:47,972 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-11 01:00:47,972 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD
2025-06-11 01:00:47,978 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2025-06-11 01:00:48,262 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-11 01:00:48,262 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2025-06-11 01:00:48,268 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2025-06-11 01:00:49,027 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-11 01:00:49,027 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2025-06-11 01:00:49,034 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head'
2025-06-11 01:00:49,529 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-11 01:00:49,529 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD
2025-06-11 01:00:49,535 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head'
2025-06-11 01:00:50,806 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-11 01:00:50,806 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD
2025-06-11 01:00:50,812 [ scc.git] DEBUG Calling 'git fetch origin pull/614/head'
2025-06-11 01:00:51,384 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-11 01:00:51,384 [ scc.git] DEBUG * branch refs/pull/614/head -> FETCH_HEAD
2025-06-11 01:00:51,390 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head'
2025-06-11 01:00:51,810 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-11 01:00:51,810 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD
2025-06-11 01:00:51,816 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head'
2025-06-11 01:00:52,160 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-11 01:00:52,160 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD
2025-06-11 01:00:52,166 [ scc.git] DEBUG Calling 'git fetch origin pull/621/head'
2025-06-11 01:00:52,583 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-11 01:00:52,583 [ scc.git] DEBUG * branch refs/pull/621/head -> FETCH_HEAD
2025-06-11 01:00:52,589 [ scc.git] DEBUG ## Unique users: []
2025-06-11 01:00:52,589 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 01:00:52,589 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 01:00:52,594 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2025-06-11 01:00:52,611 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 01:00:52,614 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2025-06-11 01:00:52,680 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2025-06-11 01:00:52,680 [ scc.git] DEBUG Auto-merging setup.py
2025-06-11 01:00:52,683 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 01:00:52,690 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2025-06-11 01:00:52,690 [ scc.git] DEBUG setup.py | 1 +
2025-06-11 01:00:52,690 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2025-06-11 01:00:52,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:52,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 01:00:52,861 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2025-06-11 01:00:52,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 01:00:52,874 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2025-06-11 01:00:52,921 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2025-06-11 01:00:52,921 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2025-06-11 01:00:52,925 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 01:00:52,931 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2025-06-11 01:00:52,931 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2025-06-11 01:00:52,932 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2025-06-11 01:00:53,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:53,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 01:00:53,280 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb'
2025-06-11 01:00:53,291 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 01:00:53,298 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb'
2025-06-11 01:00:53,367 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 01:00:53,372 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +-
2025-06-11 01:00:53,372 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-06-11 01:00:53,531 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:53,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 01:00:53,716 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8'
2025-06-11 01:00:53,727 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 01:00:53,731 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8'
2025-06-11 01:00:54,044 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 01:00:54,049 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++--
2025-06-11 01:00:54,049 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2025-06-11 01:00:54,051 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:54,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 01:00:54,220 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539'
2025-06-11 01:00:54,231 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 01:00:54,236 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539'
2025-06-11 01:00:54,310 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 01:00:54,318 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2025-06-11 01:00:54,318 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2025-06-11 01:00:54,318 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++-
2025-06-11 01:00:54,319 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2025-06-11 01:00:54,319 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2025-06-11 01:00:54,319 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2025-06-11 01:00:54,319 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2025-06-11 01:00:54,319 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++-----
2025-06-11 01:00:54,319 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2025-06-11 01:00:54,319 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2025-06-11 01:00:54,319 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++--
2025-06-11 01:00:54,319 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-)
2025-06-11 01:00:54,472 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:54,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 01:00:54,646 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2025-06-11 01:00:54,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 01:00:54,662 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2025-06-11 01:00:54,850 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2025-06-11 01:00:54,852 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 01:00:54,863 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2025-06-11 01:00:54,863 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2025-06-11 01:00:54,863 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2025-06-11 01:00:54,863 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2025-06-11 01:00:54,898 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:55,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 01:00:55,059 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26'
2025-06-11 01:00:55,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 01:00:55,074 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26'
2025-06-11 01:00:55,172 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 01:00:55,180 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++
2025-06-11 01:00:55,180 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++----------
2025-06-11 01:00:55,180 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-)
2025-06-11 01:00:55,310 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:55,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 01:00:55,479 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cca34cb278cac5fb8088df75cc4fe5f315810342'
2025-06-11 01:00:55,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 01:00:55,494 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) cca34cb278cac5fb8088df75cc4fe5f315810342'
2025-06-11 01:00:55,616 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 01:00:55,624 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 20 ++++++++++++--
2025-06-11 01:00:55,624 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 +++++++++++++++-------
2025-06-11 01:00:55,624 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 ++
2025-06-11 01:00:55,624 [ scc.git] DEBUG 3 files changed, 42 insertions(+), 11 deletions(-)
2025-06-11 01:00:55,730 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:55,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 01:00:55,894 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da14d11b161eb8aa90a6e4729758ea504d5914e3'
2025-06-11 01:00:55,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 01:00:55,911 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 614 (CodeQL workflow updates) da14d11b161eb8aa90a6e4729758ea504d5914e3'
2025-06-11 01:00:55,985 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 01:00:55,991 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 55 +++++++----------------------------
2025-06-11 01:00:55,991 [ scc.git] DEBUG 1 file changed, 11 insertions(+), 44 deletions(-)
2025-06-11 01:00:56,145 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:56,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 01:00:56,331 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6401a8d78f907d300ef6a6bb673efa86374ecc4'
2025-06-11 01:00:56,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 01:00:56,346 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Use the release/v1 branch for the PyPA action publishing to PyPI) c6401a8d78f907d300ef6a6bb673efa86374ecc4'
2025-06-11 01:00:56,392 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 01:00:56,397 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-06-11 01:00:56,397 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-06-11 01:00:56,582 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:56,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 01:00:56,752 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac'
2025-06-11 01:00:56,764 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 01:00:56,768 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac'
2025-06-11 01:00:56,874 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2025-06-11 01:00:56,876 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 01:00:56,883 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++-----
2025-06-11 01:00:56,883 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-)
2025-06-11 01:00:57,004 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:57,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 01:00:57,173 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f6b7dc5e59341f99678864923ba89565ce27956'
2025-06-11 01:00:57,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 01:00:57,190 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 621 (/webgateway/original_file_paths: handle images without Fileset) 1f6b7dc5e59341f99678864923ba89565ce27956'
2025-06-11 01:00:57,227 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-11 01:00:57,238 [ scc.git] DEBUG omeroweb/webgateway/views.py | 2 ++
2025-06-11 01:00:57,238 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2025-06-11 01:00:57,424 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:57,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 01:00:57,584 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-11 01:00:57,703 [ scc.git] DEBUG Get sha1 of %s
2025-06-11 01:00:57,704 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-11 01:00:57,710 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-11 01:00:57,850 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-11 01:00:57,865 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3b7c70790> has no local changes
2025-06-11 01:00:57,865 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 595 sukunis 'linkify supports urls that include {}[] characters'
- PR 596 sukunis 'Linkify can parse anchor tag'
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 613 will-moore 'externalInfo display'
- PR 614 sbesson 'CodeQL workflow updates'
- PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset'
Generated by OMERO-python-superbuild-push#435 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/435/)'
2025-06-11 01:00:57,885 [ scc.git] DEBUG [detached HEAD 7888305a0] merge master -Dorg -Ssuccess-only
2025-06-11 01:00:57,886 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-11 01:00:57,886 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-11 01:00:58,040 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2025-06-11 01:00:58,042 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:58,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 01:00:58,229 [ scc.config] DEBUG Found submodule.omero-marshal.url
2025-06-11 01:00:58,465 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:58,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 01:00:58,658 [ scc.config] DEBUG Found submodule.omero-py.url
2025-06-11 01:00:58,899 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:59,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 01:00:59,074 [ scc.config] DEBUG Found submodule.omero-scripts.url
2025-06-11 01:00:59,312 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:59,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 01:00:59,482 [ scc.config] DEBUG Found submodule.omero-web.url
2025-06-11 01:00:59,723 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-11 01:00:59,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-11 01:00:59,905 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-11 01:00:59,953 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3b7c4d8d0> has local changes
2025-06-11 01:00:59,953 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`'
- PR 321 dependabot[bot] 'Bump omero-py from `e485be4` to `d2f8480`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
- PR 450 multimeric 'Add model stubs' (user: multimeric)
- PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 332 jburel 'Build conda'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 460 sbesson 'omero.testlib: rename test_dir utility as create_managed_dir'
Repository: ome/omero-scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 595 sukunis 'linkify supports urls that include {}[] characters'
- PR 596 sukunis 'Linkify can parse anchor tag'
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 613 will-moore 'externalInfo display'
- PR 614 sbesson 'CodeQL workflow updates'
- PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset'
Generated by OMERO-python-superbuild-push#435 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/435/)'
2025-06-11 01:00:59,969 [ scc.git] DEBUG [detached HEAD 6d935ab] merge master -Dorg -Ssuccess-only
2025-06-11 01:00:59,970 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2025-06-11 01:00:59,973 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2025-06-11 01:00:59,974 [ scc.merge] INFO Already up to date.
2025-06-11 01:00:59,974 [ scc.merge] INFO
2025-06-11 01:00:59,974 [ scc.merge] INFO Merged PRs:
2025-06-11 01:00:59,974 [ scc.merge] INFO - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`'
2025-06-11 01:00:59,974 [ scc.merge] INFO - PR 321 dependabot[bot] 'Bump omero-py from `e485be4` to `d2f8480`'
2025-06-11 01:00:59,974 [ scc.merge] INFO
2025-06-11 01:00:59,974 [ scc.merge] INFO Repository: ome/omero-dropbox
2025-06-11 01:00:59,974 [ scc.merge] INFO Already up to date.
2025-06-11 01:00:59,974 [ scc.merge] INFO
2025-06-11 01:00:59,974 [ scc.merge] INFO Merged PRs:
2025-06-11 01:00:59,974 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2025-06-11 01:00:59,974 [ scc.merge] INFO
2025-06-11 01:00:59,974 [ scc.merge] INFO Repository: ome/omero-marshal
2025-06-11 01:00:59,974 [ scc.merge] INFO Excluded PRs:
2025-06-11 01:00:59,974 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2025-06-11 01:00:59,974 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2025-06-11 01:00:59,975 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2025-06-11 01:00:59,975 [ scc.merge] INFO Already up to date.
2025-06-11 01:00:59,975 [ scc.merge] INFO
2025-06-11 01:00:59,975 [ scc.merge] INFO Merged PRs:
2025-06-11 01:00:59,975 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2025-06-11 01:00:59,975 [ scc.merge] INFO
2025-06-11 01:00:59,975 [ scc.merge] INFO Repository: ome/omero-py
2025-06-11 01:00:59,975 [ scc.merge] INFO Excluded PRs:
2025-06-11 01:00:59,975 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
2025-06-11 01:00:59,975 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric)
2025-06-11 01:00:59,975 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
2025-06-11 01:00:59,975 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2025-06-11 01:00:59,975 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment)
2025-06-11 01:00:59,975 [ scc.merge] INFO Already up to date.
2025-06-11 01:00:59,975 [ scc.merge] INFO
2025-06-11 01:00:59,975 [ scc.merge] INFO Merged PRs:
2025-06-11 01:00:59,975 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2025-06-11 01:00:59,976 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2025-06-11 01:00:59,976 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2025-06-11 01:00:59,976 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2025-06-11 01:00:59,976 [ scc.merge] INFO - PR 460 sbesson 'omero.testlib: rename test_dir utility as create_managed_dir'
2025-06-11 01:00:59,976 [ scc.merge] INFO
2025-06-11 01:00:59,976 [ scc.merge] INFO Repository: ome/omero-scripts
2025-06-11 01:00:59,976 [ scc.merge] INFO Excluded PRs:
2025-06-11 01:00:59,976 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-06-11 01:00:59,976 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-06-11 01:00:59,976 [ scc.merge] INFO Already up to date.
2025-06-11 01:00:59,976 [ scc.merge] INFO
2025-06-11 01:00:59,976 [ scc.merge] INFO Merged PRs:
2025-06-11 01:00:59,976 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-06-11 01:00:59,976 [ scc.merge] INFO
2025-06-11 01:00:59,976 [ scc.merge] INFO Conflicting PRs (not included):
2025-06-11 01:00:59,976 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-06-11 01:00:59,976 [ scc.merge] INFO
2025-06-11 01:00:59,976 [ scc.merge] INFO Repository: ome/omero-web
2025-06-11 01:00:59,977 [ scc.merge] INFO Excluded PRs:
2025-06-11 01:00:59,977 [ scc.merge] INFO - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-06-11 01:00:59,977 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2025-06-11 01:00:59,977 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2025-06-11 01:00:59,977 [ scc.merge] INFO Already up to date.
2025-06-11 01:00:59,977 [ scc.merge] INFO
2025-06-11 01:00:59,977 [ scc.merge] INFO Merged PRs:
2025-06-11 01:00:59,977 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2025-06-11 01:00:59,977 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2025-06-11 01:00:59,977 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters'
2025-06-11 01:00:59,977 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag'
2025-06-11 01:00:59,977 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2025-06-11 01:00:59,977 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf'
2025-06-11 01:00:59,977 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2025-06-11 01:00:59,977 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display'
2025-06-11 01:00:59,977 [ scc.merge] INFO - PR 614 sbesson 'CodeQL workflow updates'
2025-06-11 01:00:59,977 [ scc.merge] INFO - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-06-11 01:00:59,978 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins'
2025-06-11 01:00:59,978 [ scc.merge] INFO - PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset'
2025-06-11 01:00:59,978 [ scc.merge] INFO
2025-06-11 01:00:59,978 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-06-11 01:00:59,978 [ scc.git] DEBUG Calling 'git remote'
2025-06-11 01:00:59,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-06-11 01:00:59,981 [ scc.git] DEBUG Calling 'git remote'
2025-06-11 01:00:59,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-11 01:00:59,988 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-06-11 01:00:59,988 [ scc.git] DEBUG Calling 'git remote'
2025-06-11 01:00:59,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-11 01:00:59,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-06-11 01:00:59,992 [ scc.git] DEBUG Calling 'git remote'
2025-06-11 01:00:59,997 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-11 01:00:59,997 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-06-11 01:00:59,997 [ scc.git] DEBUG Calling 'git remote'
2025-06-11 01:01:00,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-11 01:01:00,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-06-11 01:01:00,001 [ scc.git] DEBUG Calling 'git remote'
2025-06-11 01:01:00,005 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 504: Gateway Time-out
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 504: Gateway Time-out
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from 01fa0c5
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from 6d44f66
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from d2f84801
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 950b28b
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from c1b8fefc8
nothing to commit, working tree clean
HEAD detached from 155f8de
nothing to commit, working tree clean
2025-06-11 01:03:31,531 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS
![[Jenkins]](/jenkins/static/daea91b1/images/svgs/logo.svg){kind=logo}
