![[Jenkins]](/jenkins/static/daea91b1/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 516 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 155f8de84051621b91200b6b3617c057b622fad4 (refs/remotes/origin/master) Commit message: "Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 > git rev-list --no-walk 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 459 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.1.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.1.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.14-py3-none-any.whl.metadata (24 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.4-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.14.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-45.0.4-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.4.26-py3-none-any.whl.metadata (2.5 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-45.0.4-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.4-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (147 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.4.26-py3-none-any.whl (159 kB) Using cached typing_extensions-4.14.0-py3-none-any.whl (43 kB) Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (83 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.14-py3-none-any.whl (118 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.4.26 cffi-1.17.1 charset_normalizer-3.4.2 cryptography-45.0.4 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.4 ruamel.yaml-0.18.14 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.14.0 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-06-12 06:17:03,270 [ scc.config] DEBUG Found github.token 2025-06-12 06:17:03,272 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:03,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:17:03,709 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:03,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:17:04,156 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:04,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-06-12 06:17:04,315 [ scc.gh] DEBUG 4383 remaining from 5000 (Reset at 06:06 2025-06-12 06:17:04,316 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-06-12 06:17:04,318 [ scc.git] DEBUG Check current status 2025-06-12 06:17:04,318 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-06-12 06:17:04,321 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-06-12 06:17:04,321 [ scc.git] DEBUG Calling 'git submodule status' 2025-06-12 06:17:04,363 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-06-12 06:17:04,367 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-06-12 06:17:04,376 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-06-12 06:17:04,380 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-06-12 06:17:04,385 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-06-12 06:17:04,387 [ scc.config] DEBUG Found remote.origin.url 2025-06-12 06:17:04,566 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:04,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-06-12 06:17:05,119 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:05,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-06-12 06:17:05,637 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:05,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-06-12 06:17:06,064 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:06,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-06-12 06:17:06,495 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:06,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-06-12 06:17:06,680 [ scc.git] DEBUG Resetting... 2025-06-12 06:17:06,680 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-06-12 06:17:06,684 [ scc.git] DEBUG HEAD is now at 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-06-12 06:17:06,684 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-06-12 06:17:06,738 [ scc.git] DEBUG Check current status 2025-06-12 06:17:06,739 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-06-12 06:17:06,741 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-06-12 06:17:06,741 [ scc.git] DEBUG Calling 'git submodule status' 2025-06-12 06:17:06,782 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-06-12 06:17:06,785 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-06-12 06:17:06,794 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-06-12 06:17:06,798 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-06-12 06:17:06,802 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-06-12 06:17:06,803 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-06-12 06:17:06,803 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-06-12 06:17:06,803 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-06-12 06:17:06,803 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-06-12 06:17:06,804 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-06-12 06:17:06,804 [ scc.repo] DEBUG ## PRs found: 2025-06-12 06:17:06,930 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:07,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2025-06-12 06:17:07,437 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:07,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/321 HTTP/1.1" 200 None 2025-06-12 06:17:07,690 [ scc.repo] DEBUG # ... Include label: dependencies 2025-06-12 06:17:07,690 [ scc.repo] DEBUG - PR 321 dependabot[bot] 'Bump omero-py from `e485be4` to `d2f8480`' 2025-06-12 06:17:07,941 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:08,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/320 HTTP/1.1" 200 None 2025-06-12 06:17:08,186 [ scc.repo] DEBUG # ... Include label: dependencies 2025-06-12 06:17:08,186 [ scc.repo] DEBUG - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`' 2025-06-12 06:17:08,186 [ scc.repo] DEBUG ## Branches found: 2025-06-12 06:17:08,186 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:17:08,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:17:08,188 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-06-12 06:17:08,190 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-06-12 06:17:08,190 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-06-12 06:17:08,193 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-06-12 06:17:08,196 [ scc.git] DEBUG Already up to date. 2025-06-12 06:17:08,196 [ scc.git] DEBUG Calling 'git fetch origin pull/320/head' 2025-06-12 06:17:08,488 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-06-12 06:17:08,488 [ scc.git] DEBUG * branch refs/pull/320/head -> FETCH_HEAD 2025-06-12 06:17:08,494 [ scc.git] DEBUG Calling 'git fetch origin pull/321/head' 2025-06-12 06:17:08,794 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-06-12 06:17:08,794 [ scc.git] DEBUG * branch refs/pull/321/head -> FETCH_HEAD 2025-06-12 06:17:08,800 [ scc.git] DEBUG ## Unique users: [] 2025-06-12 06:17:08,800 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:17:08,800 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:17:08,802 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a784439f1291b60e07536b5e1fccabf5d90baa1' 2025-06-12 06:17:08,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:17:08,807 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 320 (Bump omero-web from `4b979f8` to `c1b8fef`) 1a784439f1291b60e07536b5e1fccabf5d90baa1' 2025-06-12 06:17:08,816 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:17:08,819 [ scc.git] DEBUG omero-web | 2 +- 2025-06-12 06:17:08,819 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-06-12 06:17:08,820 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:08,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:17:08,983 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4f5878abfb25d73079eb6158b59e640fbbb28207' 2025-06-12 06:17:08,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:17:08,988 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 321 (Bump omero-py from `e485be4` to `d2f8480`) 4f5878abfb25d73079eb6158b59e640fbbb28207' 2025-06-12 06:17:08,998 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:17:09,001 [ scc.git] DEBUG omero-py | 2 +- 2025-06-12 06:17:09,001 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-06-12 06:17:09,235 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:09,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:17:09,404 [ scc.git] DEBUG Calling 'git submodule update' 2025-06-12 06:17:09,487 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'd2f8480125bf0bda4e5663204366261a398266d2' 2025-06-12 06:17:09,551 [ scc.git] DEBUG Submodule path 'omero-web': checked out 'c1b8fefc872c1cadf5daba9476b405c59016abd5' 2025-06-12 06:17:09,552 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:17:09,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:17:09,554 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-06-12 06:17:09,591 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85810be890> has no local changes 2025-06-12 06:17:09,591 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`' - PR 321 dependabot[bot] 'Bump omero-py from `e485be4` to `d2f8480`' Generated by OMERO-python-superbuild-push#436 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/436/)' 2025-06-12 06:17:09,618 [ scc.git] DEBUG [detached HEAD e264e33] merge master -Dorg -Snone 2025-06-12 06:17:09,619 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-06-12 06:17:09,619 [ scc.merge] INFO Already up to date. 2025-06-12 06:17:09,619 [ scc.merge] INFO 2025-06-12 06:17:09,619 [ scc.merge] INFO Merged PRs: 2025-06-12 06:17:09,619 [ scc.merge] INFO - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`' 2025-06-12 06:17:09,619 [ scc.merge] INFO - PR 321 dependabot[bot] 'Bump omero-py from `e485be4` to `d2f8480`' 2025-06-12 06:17:09,619 [ scc.merge] INFO 2025-06-12 06:17:09,619 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-06-12 06:17:09,619 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-06-12 06:17:11,640 [ scc.config] DEBUG Found github.token 2025-06-12 06:17:11,641 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:11,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:17:12,053 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:12,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:17:12,474 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:12,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-06-12 06:17:12,630 [ scc.gh] DEBUG 4371 remaining from 5000 (Reset at 06:06 2025-06-12 06:17:12,630 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-06-12 06:17:12,633 [ scc.git] DEBUG Check current status 2025-06-12 06:17:12,633 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-06-12 06:17:12,635 [ scc.git] DEBUG e264e33 merge master -Dorg -Snone 2025-06-12 06:17:12,635 [ scc.git] DEBUG Calling 'git submodule status' 2025-06-12 06:17:12,677 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-06-12 06:17:12,680 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-06-12 06:17:12,689 [ scc.git] DEBUG d2f8480125bf0bda4e5663204366261a398266d2 omero-py (v5.20.0-16-gd2f84801) 2025-06-12 06:17:12,693 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-06-12 06:17:12,697 [ scc.git] DEBUG c1b8fefc872c1cadf5daba9476b405c59016abd5 omero-web (v5.29.0-5-gc1b8fefc8) 2025-06-12 06:17:12,700 [ scc.config] DEBUG Found remote.origin.url 2025-06-12 06:17:12,700 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-06-12 06:17:12,701 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-06-12 06:17:12,881 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:13,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-06-12 06:17:13,489 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:13,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-06-12 06:17:13,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:14,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-06-12 06:17:14,410 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:14,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-06-12 06:17:14,842 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:15,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-06-12 06:17:15,013 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-12 06:17:15,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-06-12 06:17:15,060 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-06-12 06:17:15,062 [ scc.git] DEBUG Check current status 2025-06-12 06:17:15,062 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-06-12 06:17:15,065 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-06-12 06:17:15,065 [ scc.git] DEBUG Calling 'git submodule status' 2025-06-12 06:17:15,105 [ scc.config] DEBUG Found remote.origin.url 2025-06-12 06:17:15,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:15,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-06-12 06:17:15,782 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:16,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-06-12 06:17:16,271 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:16,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-06-12 06:17:16,687 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:16,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-06-12 06:17:17,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:17,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-06-12 06:17:17,307 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-12 06:17:17,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-12 06:17:17,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-06-12 06:17:17,346 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-06-12 06:17:17,348 [ scc.git] DEBUG Check current status 2025-06-12 06:17:17,348 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-06-12 06:17:17,351 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-06-12 06:17:17,351 [ scc.git] DEBUG Calling 'git submodule status' 2025-06-12 06:17:17,390 [ scc.config] DEBUG Found remote.origin.url 2025-06-12 06:17:17,557 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:17,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-06-12 06:17:18,137 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:18,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-06-12 06:17:18,616 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:18,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-06-12 06:17:19,122 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:19,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-06-12 06:17:19,558 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:19,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-06-12 06:17:19,736 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-12 06:17:19,777 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-12 06:17:19,777 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-06-12 06:17:19,777 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-06-12 06:17:19,779 [ scc.git] DEBUG Check current status 2025-06-12 06:17:19,779 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-06-12 06:17:19,782 [ scc.git] DEBUG d2f84801 Merge pull request #453 from will-moore/externalInfo 2025-06-12 06:17:19,782 [ scc.git] DEBUG Calling 'git submodule status' 2025-06-12 06:17:19,822 [ scc.config] DEBUG Found remote.origin.url 2025-06-12 06:17:19,987 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:20,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-06-12 06:17:20,523 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:20,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-06-12 06:17:21,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:21,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-06-12 06:17:21,608 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:21,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-06-12 06:17:22,054 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:22,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-06-12 06:17:22,243 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-12 06:17:22,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-12 06:17:22,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-06-12 06:17:22,282 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-06-12 06:17:22,285 [ scc.git] DEBUG Check current status 2025-06-12 06:17:22,285 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-06-12 06:17:22,287 [ scc.git] DEBUG 950b28b Merge pull request #225 from will-moore/test_fixes 2025-06-12 06:17:22,288 [ scc.git] DEBUG Calling 'git submodule status' 2025-06-12 06:17:22,327 [ scc.config] DEBUG Found remote.origin.url 2025-06-12 06:17:22,327 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-06-12 06:17:22,494 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:22,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-06-12 06:17:23,022 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:23,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-06-12 06:17:23,495 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:23,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-06-12 06:17:23,929 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:24,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-06-12 06:17:24,365 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:24,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-06-12 06:17:24,533 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-12 06:17:24,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-12 06:17:24,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-06-12 06:17:24,573 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-06-12 06:17:24,575 [ scc.git] DEBUG Check current status 2025-06-12 06:17:24,575 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-06-12 06:17:24,578 [ scc.git] DEBUG c1b8fefc8 Merge pull request #606 from knabar/fix-large-channel-count 2025-06-12 06:17:24,578 [ scc.git] DEBUG Calling 'git submodule status' 2025-06-12 06:17:24,618 [ scc.config] DEBUG Found remote.origin.url 2025-06-12 06:17:24,783 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:25,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-06-12 06:17:25,294 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:25,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-06-12 06:17:25,798 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:25,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-06-12 06:17:26,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:26,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-06-12 06:17:26,690 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:26,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-06-12 06:17:26,873 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-12 06:17:26,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-12 06:17:26,914 [ scc.git] DEBUG Resetting... 2025-06-12 06:17:26,914 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-06-12 06:17:26,918 [ scc.git] DEBUG HEAD is now at e264e33 merge master -Dorg -Snone 2025-06-12 06:17:26,918 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-06-12 06:17:26,972 [ scc.git] DEBUG Check current status 2025-06-12 06:17:26,972 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-06-12 06:17:26,974 [ scc.git] DEBUG e264e33 merge master -Dorg -Snone 2025-06-12 06:17:26,975 [ scc.git] DEBUG Calling 'git submodule status' 2025-06-12 06:17:27,014 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-06-12 06:17:27,017 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-06-12 06:17:27,025 [ scc.git] DEBUG d2f8480125bf0bda4e5663204366261a398266d2 omero-py (v5.20.0-16-gd2f84801) 2025-06-12 06:17:27,030 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-06-12 06:17:27,034 [ scc.git] DEBUG c1b8fefc872c1cadf5daba9476b405c59016abd5 omero-web (v5.29.0-5-gc1b8fefc8) 2025-06-12 06:17:27,035 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-06-12 06:17:27,035 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-06-12 06:17:27,035 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-06-12 06:17:27,035 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-06-12 06:17:27,035 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-06-12 06:17:27,035 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-06-12 06:17:27,035 [ scc.repo] DEBUG ## PRs found: 2025-06-12 06:17:27,124 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:27,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2025-06-12 06:17:27,634 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:27,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/321 HTTP/1.1" 200 None 2025-06-12 06:17:27,878 [ scc.repo] DEBUG # ... Include label: dependencies 2025-06-12 06:17:28,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:28,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/4f5878abfb25d73079eb6158b59e640fbbb28207 HTTP/1.1" 200 None 2025-06-12 06:17:28,713 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:28,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/4f5878abfb25d73079eb6158b59e640fbbb28207/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:17:29,211 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:29,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/4f5878abfb25d73079eb6158b59e640fbbb28207 HTTP/1.1" 200 None 2025-06-12 06:17:29,792 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:30,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/4f5878abfb25d73079eb6158b59e640fbbb28207?per_page=1 HTTP/1.1" 200 2 2025-06-12 06:17:30,010 [ scc.repo] DEBUG - PR 321 dependabot[bot] 'Bump omero-py from `e485be4` to `d2f8480`' 2025-06-12 06:17:30,262 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:30,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/320 HTTP/1.1" 200 None 2025-06-12 06:17:30,492 [ scc.repo] DEBUG # ... Include label: dependencies 2025-06-12 06:17:30,743 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:31,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/1a784439f1291b60e07536b5e1fccabf5d90baa1 HTTP/1.1" 200 None 2025-06-12 06:17:31,316 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:31,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/1a784439f1291b60e07536b5e1fccabf5d90baa1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:17:31,790 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:32,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/1a784439f1291b60e07536b5e1fccabf5d90baa1 HTTP/1.1" 200 None 2025-06-12 06:17:32,317 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:32,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/1a784439f1291b60e07536b5e1fccabf5d90baa1?per_page=1 HTTP/1.1" 200 2 2025-06-12 06:17:32,517 [ scc.repo] DEBUG - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`' 2025-06-12 06:17:32,517 [ scc.repo] DEBUG ## Branches found: 2025-06-12 06:17:32,517 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:17:32,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:17:32,520 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-06-12 06:17:32,522 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-06-12 06:17:32,522 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-06-12 06:17:32,525 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-06-12 06:17:32,528 [ scc.git] DEBUG Already up to date. 2025-06-12 06:17:32,528 [ scc.git] DEBUG Calling 'git fetch origin pull/320/head' 2025-06-12 06:17:32,866 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-06-12 06:17:32,866 [ scc.git] DEBUG * branch refs/pull/320/head -> FETCH_HEAD 2025-06-12 06:17:32,873 [ scc.git] DEBUG Calling 'git fetch origin pull/321/head' 2025-06-12 06:17:33,140 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-06-12 06:17:33,140 [ scc.git] DEBUG * branch refs/pull/321/head -> FETCH_HEAD 2025-06-12 06:17:33,146 [ scc.git] DEBUG ## Unique users: [] 2025-06-12 06:17:33,146 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:17:33,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:17:33,148 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a784439f1291b60e07536b5e1fccabf5d90baa1' 2025-06-12 06:17:33,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:17:33,153 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 320 (Bump omero-web from `4b979f8` to `c1b8fef`) 1a784439f1291b60e07536b5e1fccabf5d90baa1' 2025-06-12 06:17:33,155 [ scc.git] DEBUG Already up to date. 2025-06-12 06:17:33,156 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:33,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:17:33,316 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4f5878abfb25d73079eb6158b59e640fbbb28207' 2025-06-12 06:17:33,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:17:33,320 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 321 (Bump omero-py from `e485be4` to `d2f8480`) 4f5878abfb25d73079eb6158b59e640fbbb28207' 2025-06-12 06:17:33,323 [ scc.git] DEBUG Already up to date. 2025-06-12 06:17:33,567 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:33,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:17:33,731 [ scc.git] DEBUG Calling 'git submodule update' 2025-06-12 06:17:33,772 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:17:33,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:17:33,775 [ scc.repo] DEBUG ## PRs found: 2025-06-12 06:17:33,982 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:34,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-06-12 06:17:34,519 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:34,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-06-12 06:17:35,001 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:35,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-06-12 06:17:35,531 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:35,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-06-12 06:17:36,134 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:36,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:17:36,582 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:36,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-06-12 06:17:37,037 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:37,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-06-12 06:17:37,233 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-06-12 06:17:37,233 [ scc.repo] DEBUG ## Branches found: 2025-06-12 06:17:37,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-06-12 06:17:37,233 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:17:37,233 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:17:37,235 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-06-12 06:17:37,238 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-06-12 06:17:37,238 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-06-12 06:17:37,241 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-06-12 06:17:37,244 [ scc.git] DEBUG Already up to date. 2025-06-12 06:17:37,244 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-06-12 06:17:37,555 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-06-12 06:17:37,555 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-06-12 06:17:37,559 [ scc.git] DEBUG ## Unique users: [] 2025-06-12 06:17:37,559 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:17:37,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:17:37,562 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-06-12 06:17:37,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:17:37,567 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-06-12 06:17:37,580 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-06-12 06:17:37,580 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-06-12 06:17:37,580 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-06-12 06:17:37,580 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-06-12 06:17:37,580 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-06-12 06:17:37,580 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-06-12 06:17:37,580 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-06-12 06:17:37,580 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-06-12 06:17:37,580 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-06-12 06:17:37,581 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:17:37,586 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-06-12 06:17:37,586 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-06-12 06:17:37,586 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-06-12 06:17:37,586 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-06-12 06:17:37,586 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-06-12 06:17:37,586 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-06-12 06:17:37,586 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-06-12 06:17:37,586 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-06-12 06:17:37,586 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-06-12 06:17:37,586 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-06-12 06:17:37,587 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:37,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:17:37,747 [ scc.git] DEBUG Calling 'git submodule update' 2025-06-12 06:17:37,786 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:17:37,786 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:17:37,788 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-12 06:17:37,825 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-06-12 06:17:37,829 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcff5587cd0> has no local changes 2025-06-12 06:17:37,830 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#436 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/436/)' 2025-06-12 06:17:37,837 [ scc.git] DEBUG [detached HEAD b3f13a0] merge master -Dorg -Ssuccess-only 2025-06-12 06:17:37,837 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-12 06:17:37,838 [ scc.repo] DEBUG ## PRs found: 2025-06-12 06:17:37,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:38,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-06-12 06:17:38,584 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:38,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-06-12 06:17:39,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:39,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-06-12 06:17:39,603 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:39,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-06-12 06:17:40,099 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:40,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-06-12 06:17:40,567 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:40,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-06-12 06:17:41,141 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:41,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:17:41,639 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:41,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-06-12 06:17:42,094 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:42,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-06-12 06:17:42,275 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-06-12 06:17:42,526 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:42,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-06-12 06:17:43,015 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:43,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-06-12 06:17:43,490 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:43,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-06-12 06:17:43,978 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:44,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-06-12 06:17:44,201 [ scc.repo] DEBUG ## Branches found: 2025-06-12 06:17:44,201 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-06-12 06:17:44,201 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:17:44,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:17:44,203 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-06-12 06:17:44,206 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-06-12 06:17:44,206 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-06-12 06:17:44,209 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-06-12 06:17:44,212 [ scc.git] DEBUG Already up to date. 2025-06-12 06:17:44,212 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-06-12 06:17:44,503 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-06-12 06:17:44,503 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-06-12 06:17:44,508 [ scc.git] DEBUG ## Unique users: [] 2025-06-12 06:17:44,508 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:17:44,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:17:44,510 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-06-12 06:17:44,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:17:44,516 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-06-12 06:17:44,525 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-06-12 06:17:44,526 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:17:44,529 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-06-12 06:17:44,529 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-06-12 06:17:44,529 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-06-12 06:17:44,530 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:44,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:17:44,696 [ scc.git] DEBUG Calling 'git submodule update' 2025-06-12 06:17:44,735 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:17:44,735 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:17:44,737 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-12 06:17:44,774 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-06-12 06:17:44,778 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcff5801950> has no local changes 2025-06-12 06:17:44,778 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#436 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/436/)' 2025-06-12 06:17:44,784 [ scc.git] DEBUG [detached HEAD 1cadf46] merge master -Dorg -Ssuccess-only 2025-06-12 06:17:44,784 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-12 06:17:44,785 [ scc.repo] DEBUG ## PRs found: 2025-06-12 06:17:44,947 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:45,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-06-12 06:17:45,569 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:45,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/461 HTTP/1.1" 200 None 2025-06-12 06:17:46,052 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:46,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fc7ed7a3df3bf75829c07ffa5b9a056e23310448 HTTP/1.1" 200 None 2025-06-12 06:17:46,556 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:46,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fc7ed7a3df3bf75829c07ffa5b9a056e23310448/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:17:47,055 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:47,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fc7ed7a3df3bf75829c07ffa5b9a056e23310448/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-12 06:17:47,547 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:47,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fc7ed7a3df3bf75829c07ffa5b9a056e23310448 HTTP/1.1" 200 None 2025-06-12 06:17:48,003 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:48,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/fc7ed7a3df3bf75829c07ffa5b9a056e23310448?per_page=1 HTTP/1.1" 200 None 2025-06-12 06:17:48,447 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:48,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fc7ed7a3df3bf75829c07ffa5b9a056e23310448 HTTP/1.1" 200 None 2025-06-12 06:17:48,991 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:49,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fc7ed7a3df3bf75829c07ffa5b9a056e23310448/status HTTP/1.1" 200 None 2025-06-12 06:17:49,188 [ scc.repo] DEBUG - PR 461 jburel 'Replace to/fromstring by to/frombytes' 2025-06-12 06:17:49,439 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:49,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/460 HTTP/1.1" 200 None 2025-06-12 06:17:49,929 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:50,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/460/comments HTTP/1.1" 200 None 2025-06-12 06:17:50,426 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:50,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2c0e9f319dd87422afd281e0734c304636a4a27 HTTP/1.1" 200 None 2025-06-12 06:17:50,973 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:51,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2c0e9f319dd87422afd281e0734c304636a4a27/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:17:51,481 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:51,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2c0e9f319dd87422afd281e0734c304636a4a27/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-12 06:17:51,974 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:52,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2c0e9f319dd87422afd281e0734c304636a4a27 HTTP/1.1" 200 None 2025-06-12 06:17:52,448 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:52,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c2c0e9f319dd87422afd281e0734c304636a4a27?per_page=1 HTTP/1.1" 200 None 2025-06-12 06:17:52,900 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:53,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2c0e9f319dd87422afd281e0734c304636a4a27 HTTP/1.1" 200 None 2025-06-12 06:17:53,430 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:53,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2c0e9f319dd87422afd281e0734c304636a4a27/status HTTP/1.1" 200 None 2025-06-12 06:17:53,622 [ scc.repo] DEBUG - PR 460 sbesson 'omero.testlib: rename test_dir utility as create_managed_dir' 2025-06-12 06:17:53,873 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:54,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2025-06-12 06:17:54,365 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:54,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-06-12 06:17:54,871 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:55,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None 2025-06-12 06:17:55,463 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:55,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-06-12 06:17:55,934 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:56,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-06-12 06:17:56,199 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-06-12 06:17:56,450 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:56,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-06-12 06:17:56,958 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:57,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-06-12 06:17:57,436 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:57,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-06-12 06:17:57,967 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:58,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:17:58,498 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:58,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-12 06:17:58,981 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:59,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-06-12 06:17:59,433 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:17:59,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2025-06-12 06:17:59,866 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:00,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-06-12 06:18:00,312 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:00,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2025-06-12 06:18:00,510 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-06-12 06:18:00,761 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:00,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-06-12 06:18:01,239 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:01,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-06-12 06:18:01,775 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:02,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-06-12 06:18:02,286 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:02,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:02,795 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:03,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-12 06:18:03,316 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:03,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-06-12 06:18:03,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:04,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-06-12 06:18:04,335 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:04,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-06-12 06:18:04,868 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:05,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:05,336 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:05,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-06-12 06:18:05,832 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:06,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-06-12 06:18:06,011 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-06-12 06:18:06,262 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:06,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-06-12 06:18:06,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:07,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-06-12 06:18:07,356 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:07,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-06-12 06:18:07,873 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:08,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:08,363 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:08,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-06-12 06:18:08,829 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:09,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-06-12 06:18:09,013 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-06-12 06:18:09,264 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:09,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-06-12 06:18:09,762 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:10,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-06-12 06:18:10,274 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:10,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-06-12 06:18:10,788 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:11,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-06-12 06:18:11,305 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:11,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-06-12 06:18:11,864 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:12,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:12,365 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:12,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-06-12 06:18:12,914 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:13,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-06-12 06:18:13,093 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-06-12 06:18:13,093 [ scc.repo] DEBUG ## Branches found: 2025-06-12 06:18:13,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-06-12 06:18:13,094 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:18:13,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:18:13,096 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-06-12 06:18:13,098 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-06-12 06:18:13,099 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-06-12 06:18:13,101 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-06-12 06:18:13,105 [ scc.git] DEBUG Already up to date. 2025-06-12 06:18:13,105 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-06-12 06:18:13,419 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-06-12 06:18:13,419 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-06-12 06:18:13,423 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-06-12 06:18:13,718 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-06-12 06:18:13,718 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-06-12 06:18:13,723 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-06-12 06:18:13,999 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-06-12 06:18:13,999 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-06-12 06:18:14,003 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-06-12 06:18:14,301 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-06-12 06:18:14,301 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-06-12 06:18:14,305 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2025-06-12 06:18:14,581 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-06-12 06:18:14,581 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2025-06-12 06:18:14,585 [ scc.git] DEBUG Calling 'git fetch origin pull/461/head' 2025-06-12 06:18:15,015 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-06-12 06:18:15,015 [ scc.git] DEBUG * branch refs/pull/461/head -> FETCH_HEAD 2025-06-12 06:18:15,018 [ scc.git] DEBUG ## Unique users: [] 2025-06-12 06:18:15,018 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:18:15,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:18:15,020 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-06-12 06:18:15,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:18:15,034 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-06-12 06:18:15,058 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-06-12 06:18:15,058 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-06-12 06:18:15,059 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:18:15,063 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-06-12 06:18:15,063 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-06-12 06:18:15,063 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-06-12 06:18:15,065 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:15,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:18:15,221 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-06-12 06:18:15,233 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:18:15,235 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-06-12 06:18:15,255 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:18:15,258 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-06-12 06:18:15,258 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-06-12 06:18:15,258 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-06-12 06:18:15,258 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-06-12 06:18:15,258 [ scc.git] DEBUG create mode 100644 connect.py 2025-06-12 06:18:15,472 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:15,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:18:15,655 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-06-12 06:18:15,667 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:18:15,669 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-06-12 06:18:15,692 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-06-12 06:18:15,693 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:18:15,696 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-06-12 06:18:15,697 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-06-12 06:18:15,906 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:16,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:18:16,076 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-06-12 06:18:16,088 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:18:16,090 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-06-12 06:18:16,123 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-06-12 06:18:16,124 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:18:16,131 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-06-12 06:18:16,131 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-06-12 06:18:16,327 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:16,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:18:16,497 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c2c0e9f319dd87422afd281e0734c304636a4a27' 2025-06-12 06:18:16,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:18:16,511 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (omero.testlib: rename test_dir utility as create_managed_dir) c2c0e9f319dd87422afd281e0734c304636a4a27' 2025-06-12 06:18:16,534 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:18:16,537 [ scc.git] DEBUG src/omero/testlib/__init__.py | 4 ++-- 2025-06-12 06:18:16,537 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2025-06-12 06:18:16,747 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:16,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:18:16,911 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fc7ed7a3df3bf75829c07ffa5b9a056e23310448' 2025-06-12 06:18:16,924 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:18:16,926 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 461 (Replace to/fromstring by to/frombytes) fc7ed7a3df3bf75829c07ffa5b9a056e23310448' 2025-06-12 06:18:16,968 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-06-12 06:18:16,969 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:18:16,977 [ scc.git] DEBUG src/omero/columns.py | 2 +- 2025-06-12 06:18:16,977 [ scc.git] DEBUG src/omero/gateway/__init__.py | 2 +- 2025-06-12 06:18:16,977 [ scc.git] DEBUG src/omero/util/script_utils.py | 10 +++++----- 2025-06-12 06:18:16,977 [ scc.git] DEBUG 3 files changed, 7 insertions(+), 7 deletions(-) 2025-06-12 06:18:17,162 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:17,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:18:17,331 [ scc.git] DEBUG Calling 'git submodule update' 2025-06-12 06:18:17,371 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:18:17,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:18:17,373 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-12 06:18:17,411 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-06-12 06:18:17,418 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcff559a010> has no local changes 2025-06-12 06:18:17,418 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 460 sbesson 'omero.testlib: rename test_dir utility as create_managed_dir' - PR 461 jburel 'Replace to/fromstring by to/frombytes' Generated by OMERO-python-superbuild-push#436 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/436/)' 2025-06-12 06:18:17,425 [ scc.git] DEBUG [detached HEAD cc0dfb0a] merge master -Dorg -Ssuccess-only 2025-06-12 06:18:17,425 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-12 06:18:17,425 [ scc.git] INFO Overriding base-branch from master to develop 2025-06-12 06:18:17,426 [ scc.repo] DEBUG ## PRs found: 2025-06-12 06:18:17,582 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:17,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-06-12 06:18:18,176 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:18,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/227 HTTP/1.1" 200 None 2025-06-12 06:18:18,665 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:18,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1f29df2ee64c201958e73f0d5a38c4c4a325bf65 HTTP/1.1" 200 None 2025-06-12 06:18:19,198 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:19,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1f29df2ee64c201958e73f0d5a38c4c4a325bf65/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:19,804 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:20,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1f29df2ee64c201958e73f0d5a38c4c4a325bf65/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-12 06:18:20,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:20,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1f29df2ee64c201958e73f0d5a38c4c4a325bf65 HTTP/1.1" 200 None 2025-06-12 06:18:20,836 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:21,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1f29df2ee64c201958e73f0d5a38c4c4a325bf65?per_page=1 HTTP/1.1" 200 2 2025-06-12 06:18:21,044 [ scc.repo] DEBUG - PR 227 jburel 'Replace tostring by tobytes' 2025-06-12 06:18:21,295 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:21,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-06-12 06:18:21,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:22,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-06-12 06:18:22,303 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:22,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-06-12 06:18:22,817 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:23,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:23,321 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:23,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-12 06:18:23,844 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:24,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-06-12 06:18:24,355 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:24,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-06-12 06:18:24,536 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-06-12 06:18:24,787 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:25,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-06-12 06:18:25,265 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:25,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-06-12 06:18:25,753 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:26,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-06-12 06:18:26,276 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:26,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:26,755 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:26,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-06-12 06:18:27,205 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:27,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-06-12 06:18:27,390 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-06-12 06:18:27,641 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:27,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-06-12 06:18:28,146 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:28,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-06-12 06:18:28,649 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:28,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-06-12 06:18:29,170 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:29,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-06-12 06:18:29,456 [ scc.repo] DEBUG ## Branches found: 2025-06-12 06:18:29,456 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-06-12 06:18:29,456 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:18:29,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:18:29,458 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-06-12 06:18:29,461 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-06-12 06:18:29,461 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-06-12 06:18:29,464 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-06-12 06:18:29,473 [ scc.git] DEBUG Already up to date. 2025-06-12 06:18:29,473 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-06-12 06:18:29,796 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-06-12 06:18:29,796 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-06-12 06:18:29,800 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-06-12 06:18:30,110 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-06-12 06:18:30,110 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-06-12 06:18:30,114 [ scc.git] DEBUG Calling 'git fetch origin pull/227/head' 2025-06-12 06:18:30,590 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-06-12 06:18:30,590 [ scc.git] DEBUG * branch refs/pull/227/head -> FETCH_HEAD 2025-06-12 06:18:30,593 [ scc.git] DEBUG ## Unique users: [] 2025-06-12 06:18:30,593 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:18:30,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:18:30,595 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-06-12 06:18:30,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:18:30,603 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-06-12 06:18:30,613 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-06-12 06:18:30,613 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-06-12 06:18:30,614 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-06-12 06:18:30,616 [ scc.git] DEBUG Calling 'git reset --hard 950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-06-12 06:18:30,620 [ scc.git] DEBUG HEAD is now at 950b28b Merge pull request #225 from will-moore/test_fixes 2025-06-12 06:18:30,621 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:30,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:18:30,788 [ scc.git] DEBUG Calling 'git merge-base 950b28b31e228ae7b317cbd159235faf4023e4dc 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-06-12 06:18:30,793 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-06-12 06:18:30,798 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#436](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/436/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/436/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-06-12 06:18:30,800 [ scc.config] DEBUG Found github.token 2025-06-12 06:18:30,800 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-06-12 06:18:30,800 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-06-12 06:18:30,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:18:30,806 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-06-12 06:18:30,816 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:18:30,819 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-06-12 06:18:30,819 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-06-12 06:18:31,039 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:31,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:18:31,208 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f29df2ee64c201958e73f0d5a38c4c4a325bf65' 2025-06-12 06:18:31,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:18:31,213 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 227 (Replace tostring by tobytes) 1f29df2ee64c201958e73f0d5a38c4c4a325bf65' 2025-06-12 06:18:31,223 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:18:31,226 [ scc.git] DEBUG omero/export_scripts/Make_Movie.py | 2 +- 2025-06-12 06:18:31,226 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-06-12 06:18:31,459 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:31,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:18:31,630 [ scc.git] DEBUG Calling 'git submodule update' 2025-06-12 06:18:31,669 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:18:31,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:18:31,671 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-12 06:18:31,709 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-06-12 06:18:31,713 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcff806fed0> has no local changes 2025-06-12 06:18:31,713 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 227 jburel 'Replace tostring by tobytes' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#436 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/436/)' 2025-06-12 06:18:31,736 [ scc.git] DEBUG [detached HEAD 8a9a271] merge master -Dorg -Ssuccess-only 2025-06-12 06:18:31,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-12 06:18:31,737 [ scc.repo] DEBUG ## PRs found: 2025-06-12 06:18:31,881 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:32,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-06-12 06:18:32,568 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:32,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/623 HTTP/1.1" 200 None 2025-06-12 06:18:33,073 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:33,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/0343a1acda423eef3ca919c785761c5963a0b353 HTTP/1.1" 200 None 2025-06-12 06:18:33,620 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:33,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/0343a1acda423eef3ca919c785761c5963a0b353/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:34,123 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:34,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/0343a1acda423eef3ca919c785761c5963a0b353/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-12 06:18:34,657 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:34,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/0343a1acda423eef3ca919c785761c5963a0b353 HTTP/1.1" 200 None 2025-06-12 06:18:35,131 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:35,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/0343a1acda423eef3ca919c785761c5963a0b353?per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:35,596 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:35,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/0343a1acda423eef3ca919c785761c5963a0b353 HTTP/1.1" 200 None 2025-06-12 06:18:36,102 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:36,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/0343a1acda423eef3ca919c785761c5963a0b353/status HTTP/1.1" 200 None 2025-06-12 06:18:36,297 [ scc.repo] DEBUG - PR 623 jburel 'Replace fromstring by frombytes' 2025-06-12 06:18:36,548 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:36,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/621 HTTP/1.1" 200 None 2025-06-12 06:18:37,028 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:37,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956 HTTP/1.1" 200 None 2025-06-12 06:18:37,572 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:37,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:38,096 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:38,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-12 06:18:38,594 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:38,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956 HTTP/1.1" 200 None 2025-06-12 06:18:39,109 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:39,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1f6b7dc5e59341f99678864923ba89565ce27956?per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:39,558 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:39,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956 HTTP/1.1" 200 None 2025-06-12 06:18:40,034 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:40,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956/status HTTP/1.1" 200 None 2025-06-12 06:18:40,239 [ scc.repo] DEBUG - PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset' 2025-06-12 06:18:40,490 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:40,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None 2025-06-12 06:18:40,984 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:41,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-06-12 06:18:41,556 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:41,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:42,067 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:42,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-12 06:18:42,581 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:42,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-06-12 06:18:43,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:43,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:43,603 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:43,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-06-12 06:18:44,071 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:44,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None 2025-06-12 06:18:44,270 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-06-12 06:18:44,520 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:44,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/617 HTTP/1.1" 200 None 2025-06-12 06:18:45,033 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:45,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/616 HTTP/1.1" 200 None 2025-06-12 06:18:45,518 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:45,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-06-12 06:18:46,055 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:46,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:46,536 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:46,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-12 06:18:47,048 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:47,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-06-12 06:18:47,563 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:47,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/c6401a8d78f907d300ef6a6bb673efa86374ecc4?per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:48,025 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:48,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-06-12 06:18:48,532 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:48,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/status HTTP/1.1" 200 None 2025-06-12 06:18:48,721 [ scc.repo] DEBUG - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-06-12 06:18:48,972 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:49,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614 HTTP/1.1" 200 None 2025-06-12 06:18:49,442 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:49,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614/comments HTTP/1.1" 200 None 2025-06-12 06:18:49,946 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:50,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-06-12 06:18:50,488 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:50,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:50,987 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:51,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-12 06:18:51,485 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:51,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-06-12 06:18:51,953 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:52,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/da14d11b161eb8aa90a6e4729758ea504d5914e3?per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:52,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:52,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-06-12 06:18:52,907 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:53,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/status HTTP/1.1" 200 None 2025-06-12 06:18:53,117 [ scc.repo] DEBUG - PR 614 sbesson 'CodeQL workflow updates' 2025-06-12 06:18:53,368 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:53,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-06-12 06:18:53,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:54,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-06-12 06:18:54,360 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:54,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-06-12 06:18:54,887 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:55,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:55,382 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:55,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-12 06:18:55,906 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:56,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-06-12 06:18:56,433 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:56,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/cca34cb278cac5fb8088df75cc4fe5f315810342?per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:56,882 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:57,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-06-12 06:18:57,327 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:57,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/status HTTP/1.1" 200 None 2025-06-12 06:18:57,536 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-06-12 06:18:57,787 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:58,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-06-12 06:18:58,254 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:58,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-06-12 06:18:58,732 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:58,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-06-12 06:18:59,239 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:18:59,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:18:59,769 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:00,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-12 06:19:00,283 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:00,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-06-12 06:19:00,742 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:00,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-06-12 06:19:01,227 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:01,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-06-12 06:19:01,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:01,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-06-12 06:19:01,928 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-06-12 06:19:02,178 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:02,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-06-12 06:19:02,665 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:02,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-06-12 06:19:03,152 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:03,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-06-12 06:19:03,701 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:03,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:19:04,205 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:04,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-12 06:19:04,718 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:04,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-06-12 06:19:05,171 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:05,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-06-12 06:19:05,612 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:05,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-06-12 06:19:06,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:06,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-06-12 06:19:06,333 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-06-12 06:19:06,584 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:06,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-06-12 06:19:07,102 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:07,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-06-12 06:19:07,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:07,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:19:08,157 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:08,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-12 06:19:08,675 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:08,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-06-12 06:19:09,189 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:09,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-06-12 06:19:09,659 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:09,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-06-12 06:19:10,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:10,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-06-12 06:19:10,393 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-06-12 06:19:10,644 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:10,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-06-12 06:19:11,138 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:11,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-06-12 06:19:11,659 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:11,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-06-12 06:19:12,175 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:12,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:19:12,682 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:12,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-12 06:19:13,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:13,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-06-12 06:19:13,718 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:13,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-06-12 06:19:14,181 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:14,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-06-12 06:19:14,776 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:14,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-06-12 06:19:14,976 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-06-12 06:19:15,227 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:15,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-06-12 06:19:15,705 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:15,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-06-12 06:19:16,164 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:16,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-06-12 06:19:16,673 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:16,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:19:17,171 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:17,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-12 06:19:17,719 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:17,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-06-12 06:19:18,239 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:18,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-06-12 06:19:18,694 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:18,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-06-12 06:19:19,136 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:19,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-06-12 06:19:19,348 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-06-12 06:19:19,599 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:19,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-06-12 06:19:20,097 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:20,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-06-12 06:19:20,616 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:20,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-06-12 06:19:21,089 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:21,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-06-12 06:19:21,588 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:21,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-06-12 06:19:22,147 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:22,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:19:22,639 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:22,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-06-12 06:19:23,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:23,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-06-12 06:19:23,355 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-06-12 06:19:23,606 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:23,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-06-12 06:19:24,095 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:24,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-06-12 06:19:24,621 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:24,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-06-12 06:19:25,146 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:25,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:19:25,604 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:25,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-06-12 06:19:26,122 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:26,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-06-12 06:19:26,292 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-06-12 06:19:26,543 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:26,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-06-12 06:19:27,038 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:27,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-06-12 06:19:27,568 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:27,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-06-12 06:19:28,089 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:28,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-12 06:19:28,599 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:28,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-12 06:19:28,848 [ scc.repo] DEBUG ## Branches found: 2025-06-12 06:19:28,848 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-06-12 06:19:28,848 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:19:28,848 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:19:28,851 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-06-12 06:19:28,853 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-06-12 06:19:28,853 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-06-12 06:19:28,857 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-06-12 06:19:28,860 [ scc.git] DEBUG Already up to date. 2025-06-12 06:19:28,860 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-06-12 06:19:29,166 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-12 06:19:29,166 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-06-12 06:19:29,170 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-06-12 06:19:29,462 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-12 06:19:29,462 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-06-12 06:19:29,466 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-06-12 06:19:29,746 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-12 06:19:29,746 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-06-12 06:19:29,751 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-06-12 06:19:30,021 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-12 06:19:30,021 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-06-12 06:19:30,026 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-06-12 06:19:30,308 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-12 06:19:30,308 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-06-12 06:19:30,313 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-06-12 06:19:30,579 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-12 06:19:30,579 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-06-12 06:19:30,584 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-06-12 06:19:30,861 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-12 06:19:30,861 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-06-12 06:19:30,866 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-06-12 06:19:31,129 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-12 06:19:31,129 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-06-12 06:19:31,133 [ scc.git] DEBUG Calling 'git fetch origin pull/614/head' 2025-06-12 06:19:31,404 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-12 06:19:31,404 [ scc.git] DEBUG * branch refs/pull/614/head -> FETCH_HEAD 2025-06-12 06:19:31,408 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-06-12 06:19:31,670 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-12 06:19:31,670 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-06-12 06:19:31,674 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head' 2025-06-12 06:19:31,957 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-12 06:19:31,957 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD 2025-06-12 06:19:31,962 [ scc.git] DEBUG Calling 'git fetch origin pull/621/head' 2025-06-12 06:19:32,254 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-12 06:19:32,254 [ scc.git] DEBUG * branch refs/pull/621/head -> FETCH_HEAD 2025-06-12 06:19:32,258 [ scc.git] DEBUG Calling 'git fetch origin pull/623/head' 2025-06-12 06:19:32,721 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-12 06:19:32,721 [ scc.git] DEBUG * branch refs/pull/623/head -> FETCH_HEAD 2025-06-12 06:19:32,724 [ scc.git] DEBUG ## Unique users: [] 2025-06-12 06:19:32,724 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:19:32,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:19:32,726 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-06-12 06:19:32,734 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:19:32,736 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-06-12 06:19:32,756 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-06-12 06:19:32,756 [ scc.git] DEBUG Auto-merging setup.py 2025-06-12 06:19:32,757 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:19:32,761 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-06-12 06:19:32,761 [ scc.git] DEBUG setup.py | 1 + 2025-06-12 06:19:32,762 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-06-12 06:19:32,763 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:32,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:19:32,926 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-06-12 06:19:32,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:19:32,936 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-06-12 06:19:32,957 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-06-12 06:19:32,957 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-06-12 06:19:32,959 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:19:32,963 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-06-12 06:19:32,963 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-06-12 06:19:32,963 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-06-12 06:19:33,177 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:33,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:19:33,330 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-06-12 06:19:33,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:19:33,340 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-06-12 06:19:33,360 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:19:33,364 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-06-12 06:19:33,364 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-06-12 06:19:33,580 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:33,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:19:33,742 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-06-12 06:19:33,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:19:33,752 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-06-12 06:19:33,771 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:19:33,775 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-06-12 06:19:33,775 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-06-12 06:19:33,992 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:34,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:19:34,169 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-06-12 06:19:34,177 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:19:34,179 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-06-12 06:19:34,200 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:19:34,205 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-06-12 06:19:34,205 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-06-12 06:19:34,205 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-06-12 06:19:34,205 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-06-12 06:19:34,205 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-06-12 06:19:34,205 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-06-12 06:19:34,205 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-06-12 06:19:34,205 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-06-12 06:19:34,205 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-06-12 06:19:34,205 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-06-12 06:19:34,205 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-06-12 06:19:34,205 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-06-12 06:19:34,420 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:34,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:19:34,583 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-06-12 06:19:34,591 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:19:34,594 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-06-12 06:19:34,619 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-06-12 06:19:34,621 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:19:34,627 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-06-12 06:19:34,627 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-06-12 06:19:34,627 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-06-12 06:19:34,627 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-06-12 06:19:34,834 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:35,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:19:35,005 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-06-12 06:19:35,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:19:35,016 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-06-12 06:19:35,036 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:19:35,040 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-06-12 06:19:35,040 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-06-12 06:19:35,040 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-06-12 06:19:35,256 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:35,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:19:35,418 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cca34cb278cac5fb8088df75cc4fe5f315810342' 2025-06-12 06:19:35,426 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:19:35,428 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) cca34cb278cac5fb8088df75cc4fe5f315810342' 2025-06-12 06:19:35,448 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:19:35,452 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 20 ++++++++++++-- 2025-06-12 06:19:35,452 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 +++++++++++++++------- 2025-06-12 06:19:35,452 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 ++ 2025-06-12 06:19:35,452 [ scc.git] DEBUG 3 files changed, 42 insertions(+), 11 deletions(-) 2025-06-12 06:19:35,668 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:35,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:19:35,829 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-06-12 06:19:35,838 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:19:35,840 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 614 (CodeQL workflow updates) da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-06-12 06:19:35,860 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:19:35,863 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 55 +++++++---------------------------- 2025-06-12 06:19:35,863 [ scc.git] DEBUG 1 file changed, 11 insertions(+), 44 deletions(-) 2025-06-12 06:19:36,080 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:36,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:19:36,248 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-06-12 06:19:36,256 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:19:36,258 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Use the release/v1 branch for the PyPA action publishing to PyPI) c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-06-12 06:19:36,277 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:19:36,281 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-06-12 06:19:36,281 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-06-12 06:19:36,499 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:36,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:19:36,656 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-06-12 06:19:36,664 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:19:36,666 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-06-12 06:19:36,685 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-06-12 06:19:36,687 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:19:36,691 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++----- 2025-06-12 06:19:36,691 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-) 2025-06-12 06:19:36,907 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:37,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:19:37,088 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f6b7dc5e59341f99678864923ba89565ce27956' 2025-06-12 06:19:37,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:19:37,098 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 621 (/webgateway/original_file_paths: handle images without Fileset) 1f6b7dc5e59341f99678864923ba89565ce27956' 2025-06-12 06:19:37,118 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:19:37,123 [ scc.git] DEBUG omeroweb/webgateway/views.py | 2 ++ 2025-06-12 06:19:37,123 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-06-12 06:19:37,339 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:37,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:19:37,495 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0343a1acda423eef3ca919c785761c5963a0b353' 2025-06-12 06:19:37,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:19:37,507 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 623 (Replace fromstring by frombytes) 0343a1acda423eef3ca919c785761c5963a0b353' 2025-06-12 06:19:37,533 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py 2025-06-12 06:19:37,535 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-12 06:19:37,539 [ scc.git] DEBUG omeroweb/webgateway/views.py | 2 +- 2025-06-12 06:19:37,539 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-06-12 06:19:37,746 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:37,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:19:37,915 [ scc.git] DEBUG Calling 'git submodule update' 2025-06-12 06:19:37,954 [ scc.git] DEBUG Get sha1 of %s 2025-06-12 06:19:37,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-12 06:19:37,957 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-12 06:19:37,995 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-06-12 06:19:38,003 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcff5801a50> has no local changes 2025-06-12 06:19:38,004 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset' - PR 623 jburel 'Replace fromstring by frombytes' Generated by OMERO-python-superbuild-push#436 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/436/)' 2025-06-12 06:19:38,012 [ scc.git] DEBUG [detached HEAD 96645cba4] merge master -Dorg -Ssuccess-only 2025-06-12 06:19:38,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-12 06:19:38,013 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-12 06:19:38,059 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-06-12 06:19:38,166 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:38,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:19:38,326 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-06-12 06:19:38,571 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:38,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:19:38,743 [ scc.config] DEBUG Found submodule.omero-py.url 2025-06-12 06:19:38,988 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:39,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:19:39,154 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-06-12 06:19:39,399 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:39,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:19:39,570 [ scc.config] DEBUG Found submodule.omero-web.url 2025-06-12 06:19:39,815 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-12 06:19:39,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-12 06:19:39,988 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-06-12 06:19:40,016 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcff5709950> has local changes 2025-06-12 06:19:40,016 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`' - PR 321 dependabot[bot] 'Bump omero-py from `e485be4` to `d2f8480`' Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 460 sbesson 'omero.testlib: rename test_dir utility as create_managed_dir' - PR 461 jburel 'Replace to/fromstring by to/frombytes' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 227 jburel 'Replace tostring by tobytes' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset' - PR 623 jburel 'Replace fromstring by frombytes' Generated by OMERO-python-superbuild-push#436 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/436/)' 2025-06-12 06:19:40,024 [ scc.git] DEBUG [detached HEAD a47c783] merge master -Dorg -Ssuccess-only 2025-06-12 06:19:40,024 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-06-12 06:19:40,024 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-06-12 06:19:40,024 [ scc.merge] INFO Already up to date. 2025-06-12 06:19:40,024 [ scc.merge] INFO 2025-06-12 06:19:40,024 [ scc.merge] INFO Merged PRs: 2025-06-12 06:19:40,024 [ scc.merge] INFO - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`' 2025-06-12 06:19:40,024 [ scc.merge] INFO - PR 321 dependabot[bot] 'Bump omero-py from `e485be4` to `d2f8480`' 2025-06-12 06:19:40,024 [ scc.merge] INFO 2025-06-12 06:19:40,024 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-06-12 06:19:40,024 [ scc.merge] INFO Already up to date. 2025-06-12 06:19:40,024 [ scc.merge] INFO 2025-06-12 06:19:40,024 [ scc.merge] INFO Merged PRs: 2025-06-12 06:19:40,024 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-06-12 06:19:40,024 [ scc.merge] INFO 2025-06-12 06:19:40,024 [ scc.merge] INFO Repository: ome/omero-marshal 2025-06-12 06:19:40,024 [ scc.merge] INFO Excluded PRs: 2025-06-12 06:19:40,024 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-06-12 06:19:40,024 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-06-12 06:19:40,024 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-06-12 06:19:40,024 [ scc.merge] INFO Already up to date. 2025-06-12 06:19:40,024 [ scc.merge] INFO 2025-06-12 06:19:40,024 [ scc.merge] INFO Merged PRs: 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-06-12 06:19:40,025 [ scc.merge] INFO 2025-06-12 06:19:40,025 [ scc.merge] INFO Repository: ome/omero-py 2025-06-12 06:19:40,025 [ scc.merge] INFO Excluded PRs: 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-06-12 06:19:40,025 [ scc.merge] INFO Already up to date. 2025-06-12 06:19:40,025 [ scc.merge] INFO 2025-06-12 06:19:40,025 [ scc.merge] INFO Merged PRs: 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 460 sbesson 'omero.testlib: rename test_dir utility as create_managed_dir' 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 461 jburel 'Replace to/fromstring by to/frombytes' 2025-06-12 06:19:40,025 [ scc.merge] INFO 2025-06-12 06:19:40,025 [ scc.merge] INFO Repository: ome/omero-scripts 2025-06-12 06:19:40,025 [ scc.merge] INFO Excluded PRs: 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-06-12 06:19:40,025 [ scc.merge] INFO Already up to date. 2025-06-12 06:19:40,025 [ scc.merge] INFO 2025-06-12 06:19:40,025 [ scc.merge] INFO Merged PRs: 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2025-06-12 06:19:40,025 [ scc.merge] INFO 2025-06-12 06:19:40,025 [ scc.merge] INFO Conflicting PRs (not included): 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-06-12 06:19:40,025 [ scc.merge] INFO 2025-06-12 06:19:40,025 [ scc.merge] INFO Repository: ome/omero-web 2025-06-12 06:19:40,025 [ scc.merge] INFO Excluded PRs: 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-06-12 06:19:40,025 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2025-06-12 06:19:40,025 [ scc.merge] INFO Already up to date. 2025-06-12 06:19:40,026 [ scc.merge] INFO 2025-06-12 06:19:40,026 [ scc.merge] INFO Merged PRs: 2025-06-12 06:19:40,026 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-06-12 06:19:40,026 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-06-12 06:19:40,026 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-06-12 06:19:40,026 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-06-12 06:19:40,026 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-06-12 06:19:40,026 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-06-12 06:19:40,026 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-06-12 06:19:40,026 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-06-12 06:19:40,026 [ scc.merge] INFO - PR 614 sbesson 'CodeQL workflow updates' 2025-06-12 06:19:40,026 [ scc.merge] INFO - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-06-12 06:19:40,026 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-06-12 06:19:40,026 [ scc.merge] INFO - PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset' 2025-06-12 06:19:40,026 [ scc.merge] INFO - PR 623 jburel 'Replace fromstring by frombytes' 2025-06-12 06:19:40,026 [ scc.merge] INFO 2025-06-12 06:19:40,026 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-06-12 06:19:40,026 [ scc.git] DEBUG Calling 'git remote' 2025-06-12 06:19:40,028 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-06-12 06:19:40,028 [ scc.git] DEBUG Calling 'git remote' 2025-06-12 06:19:40,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-12 06:19:40,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-06-12 06:19:40,030 [ scc.git] DEBUG Calling 'git remote' 2025-06-12 06:19:40,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-12 06:19:40,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-06-12 06:19:40,033 [ scc.git] DEBUG Calling 'git remote' 2025-06-12 06:19:40,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-12 06:19:40,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-06-12 06:19:40,035 [ scc.git] DEBUG Calling 'git remote' 2025-06-12 06:19:40,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-12 06:19:40,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-06-12 06:19:40,037 [ scc.git] DEBUG Calling 'git remote' 2025-06-12 06:19:40,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from d2f84801 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 950b28b nothing to commit, working tree clean Entering 'omero-web' HEAD detached from c1b8fefc8 nothing to commit, working tree clean HEAD detached from 155f8de nothing to commit, working tree clean 2025-06-12 06:20:09,578 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS