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Full LogTestTestTestTestTestTestTestTestTestTestTestTestTest
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Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.6.15 cffi-1.17.1 charset_normalizer-3.4.2 cryptography-45.0.4 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.4 ruamel.yaml-0.18.14 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.14.0 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-06-17 00:41:16,437 [ scc.config] DEBUG Found github.token
2025-06-17 00:41:16,438 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:16,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:41:16,861 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:17,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:41:17,282 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:17,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-06-17 00:41:17,448 [ scc.gh] DEBUG 4998 remaining from 5000 (Reset at 01:06
2025-06-17 00:41:17,448 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-17 00:41:17,451 [ scc.git] DEBUG Check current status
2025-06-17 00:41:17,451 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-17 00:41:17,454 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4
2025-06-17 00:41:17,454 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-17 00:41:17,499 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-06-17 00:41:17,502 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-06-17 00:41:17,511 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49)
2025-06-17 00:41:17,516 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b)
2025-06-17 00:41:17,520 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847)
2025-06-17 00:41:17,523 [ scc.config] DEBUG Found remote.origin.url
2025-06-17 00:41:17,699 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:17,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2025-06-17 00:41:18,208 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:18,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-17 00:41:18,709 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:18,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-17 00:41:19,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:19,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-17 00:41:19,599 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:19,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-17 00:41:19,811 [ scc.git] DEBUG Resetting...
2025-06-17 00:41:19,811 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-06-17 00:41:19,816 [ scc.git] DEBUG HEAD is now at 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4
2025-06-17 00:41:19,816 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-06-17 00:41:19,875 [ scc.git] DEBUG Check current status
2025-06-17 00:41:19,875 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-17 00:41:19,877 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4
2025-06-17 00:41:19,878 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-17 00:41:19,921 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-06-17 00:41:19,925 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-06-17 00:41:19,934 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49)
2025-06-17 00:41:19,939 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b)
2025-06-17 00:41:19,943 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847)
2025-06-17 00:41:19,944 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-06-17 00:41:19,944 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-06-17 00:41:19,944 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-06-17 00:41:19,944 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-06-17 00:41:19,944 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-06-17 00:41:19,944 [ scc.repo] DEBUG ## PRs found:
2025-06-17 00:41:20,061 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:20,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2025-06-17 00:41:20,586 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:20,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/322 HTTP/1.1" 200 None
2025-06-17 00:41:20,829 [ scc.repo] DEBUG # ... Include label: dependencies
2025-06-17 00:41:20,829 [ scc.repo] DEBUG - PR 322 dependabot[bot] 'Bump omero-py from `e485be4` to `58ff255`'
2025-06-17 00:41:21,080 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:21,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/320 HTTP/1.1" 200 None
2025-06-17 00:41:21,308 [ scc.repo] DEBUG # ... Include label: dependencies
2025-06-17 00:41:21,308 [ scc.repo] DEBUG - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`'
2025-06-17 00:41:21,308 [ scc.repo] DEBUG ## Branches found:
2025-06-17 00:41:21,308 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:41:21,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:41:21,311 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-17 00:41:21,313 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-17 00:41:21,313 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-17 00:41:21,316 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-17 00:41:21,319 [ scc.git] DEBUG Already up to date.
2025-06-17 00:41:21,319 [ scc.git] DEBUG Calling 'git fetch origin pull/320/head'
2025-06-17 00:41:21,631 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2025-06-17 00:41:21,631 [ scc.git] DEBUG * branch refs/pull/320/head -> FETCH_HEAD
2025-06-17 00:41:21,638 [ scc.git] DEBUG Calling 'git fetch origin pull/322/head'
2025-06-17 00:41:21,942 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2025-06-17 00:41:21,942 [ scc.git] DEBUG * branch refs/pull/322/head -> FETCH_HEAD
2025-06-17 00:41:21,948 [ scc.git] DEBUG ## Unique users: []
2025-06-17 00:41:21,949 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:41:21,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:41:21,951 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a784439f1291b60e07536b5e1fccabf5d90baa1'
2025-06-17 00:41:21,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:41:21,956 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 320 (Bump omero-web from `4b979f8` to `c1b8fef`) 1a784439f1291b60e07536b5e1fccabf5d90baa1'
2025-06-17 00:41:21,965 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:41:21,968 [ scc.git] DEBUG omero-web | 2 +-
2025-06-17 00:41:21,968 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-06-17 00:41:21,970 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:22,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:41:22,135 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...026772861d363d931c7907b901be2c3a48401cf0'
2025-06-17 00:41:22,138 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:41:22,140 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 322 (Bump omero-py from `e485be4` to `58ff255`) 026772861d363d931c7907b901be2c3a48401cf0'
2025-06-17 00:41:22,150 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:41:22,153 [ scc.git] DEBUG omero-py | 2 +-
2025-06-17 00:41:22,153 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-06-17 00:41:22,386 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:22,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:41:22,551 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-17 00:41:22,619 [ scc.git] DEBUG Submodule path 'omero-py': checked out '58ff255d01a78a01f22fd905829c25bfb1a0fbe7'
2025-06-17 00:41:22,641 [ scc.git] DEBUG Submodule path 'omero-web': checked out 'c1b8fefc872c1cadf5daba9476b405c59016abd5'
2025-06-17 00:41:22,642 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:41:22,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:41:22,645 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-17 00:41:22,677 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9a2f198c50> has no local changes
2025-06-17 00:41:22,677 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`'
- PR 322 dependabot[bot] 'Bump omero-py from `e485be4` to `58ff255`'
Generated by OMERO-python-superbuild-push#439 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/439/)'
2025-06-17 00:41:22,707 [ scc.git] DEBUG [detached HEAD 99a11f4] merge master -Dorg -Snone
2025-06-17 00:41:22,708 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2025-06-17 00:41:22,708 [ scc.merge] INFO Already up to date.
2025-06-17 00:41:22,708 [ scc.merge] INFO
2025-06-17 00:41:22,708 [ scc.merge] INFO Merged PRs:
2025-06-17 00:41:22,708 [ scc.merge] INFO - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`'
2025-06-17 00:41:22,708 [ scc.merge] INFO - PR 322 dependabot[bot] 'Bump omero-py from `e485be4` to `58ff255`'
2025-06-17 00:41:22,708 [ scc.merge] INFO
2025-06-17 00:41:22,708 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-06-17 00:41:22,708 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Submodule path 'omero-py': checked out '1d15ade091e1787e746170c70fb233b58c59737b'
From https://github.com/ome/omero-scripts
950b28b..573db34 develop -> origin/develop
* [new tag] v5.9.1 -> v5.9.1
Submodule path 'omero-scripts': checked out '573db340d5d1429fa17c7e486206948412a7c150'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2025-06-17 00:41:24,912 [ scc.config] DEBUG Found github.token
2025-06-17 00:41:24,914 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:25,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:41:25,331 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:25,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:41:25,744 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:25,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-06-17 00:41:25,899 [ scc.gh] DEBUG 4986 remaining from 5000 (Reset at 01:06
2025-06-17 00:41:25,900 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-17 00:41:25,903 [ scc.git] DEBUG Check current status
2025-06-17 00:41:25,903 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-17 00:41:25,905 [ scc.git] DEBUG 99a11f4 merge master -Dorg -Snone
2025-06-17 00:41:25,906 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-17 00:41:25,949 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-06-17 00:41:25,953 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-06-17 00:41:25,958 [ scc.git] DEBUG +1d15ade091e1787e746170c70fb233b58c59737b omero-py (v5.21.0-1-g1d15ade0)
2025-06-17 00:41:25,962 [ scc.git] DEBUG +573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34)
2025-06-17 00:41:25,967 [ scc.git] DEBUG c1b8fefc872c1cadf5daba9476b405c59016abd5 omero-web (v5.29.0-5-gc1b8fefc8)
2025-06-17 00:41:25,970 [ scc.config] DEBUG Found remote.origin.url
2025-06-17 00:41:25,970 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2025-06-17 00:41:25,971 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2025-06-17 00:41:26,151 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:26,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2025-06-17 00:41:26,653 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:26,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-17 00:41:27,138 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:27,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-17 00:41:27,583 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:27,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-17 00:41:28,015 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:28,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-17 00:41:28,198 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-17 00:41:28,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-06-17 00:41:28,250 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-17 00:41:28,252 [ scc.git] DEBUG Check current status
2025-06-17 00:41:28,252 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-17 00:41:28,255 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build
2025-06-17 00:41:28,255 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-17 00:41:28,300 [ scc.config] DEBUG Found remote.origin.url
2025-06-17 00:41:28,449 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:28,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2025-06-17 00:41:28,999 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:29,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-17 00:41:29,527 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:29,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-17 00:41:29,950 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:30,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-17 00:41:30,380 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:30,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-17 00:41:30,574 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-17 00:41:30,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-17 00:41:30,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-06-17 00:41:30,619 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-17 00:41:30,621 [ scc.git] DEBUG Check current status
2025-06-17 00:41:30,621 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-17 00:41:30,624 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build
2025-06-17 00:41:30,624 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-17 00:41:30,667 [ scc.config] DEBUG Found remote.origin.url
2025-06-17 00:41:30,825 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:31,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2025-06-17 00:41:31,370 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:31,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-17 00:41:31,850 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:32,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-17 00:41:32,276 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:32,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-17 00:41:32,710 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:32,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-17 00:41:32,907 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-17 00:41:32,949 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-17 00:41:32,950 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-06-17 00:41:32,950 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-17 00:41:32,952 [ scc.git] DEBUG Check current status
2025-06-17 00:41:32,952 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-17 00:41:32,955 [ scc.git] DEBUG 1d15ade0 Bump version: 5.21.0 → 5.21.1.dev0
2025-06-17 00:41:32,955 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-17 00:41:32,999 [ scc.config] DEBUG Found remote.origin.url
2025-06-17 00:41:33,158 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:33,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2025-06-17 00:41:33,678 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:33,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-17 00:41:34,149 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:34,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-17 00:41:34,593 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:34,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-17 00:41:35,035 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:35,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-17 00:41:35,250 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-17 00:41:35,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-17 00:41:35,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-06-17 00:41:35,291 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-17 00:41:35,293 [ scc.git] DEBUG Check current status
2025-06-17 00:41:35,294 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-17 00:41:35,296 [ scc.git] DEBUG 573db34 Bump version: 5.9.1 → 5.9.2.dev0
2025-06-17 00:41:35,296 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-17 00:41:35,337 [ scc.config] DEBUG Found remote.origin.url
2025-06-17 00:41:35,337 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2025-06-17 00:41:35,500 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:35,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2025-06-17 00:41:36,056 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:36,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-17 00:41:36,538 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:36,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-17 00:41:36,981 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:37,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-17 00:41:37,445 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:37,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-17 00:41:37,618 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-17 00:41:37,662 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-17 00:41:37,663 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-06-17 00:41:37,663 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-17 00:41:37,665 [ scc.git] DEBUG Check current status
2025-06-17 00:41:37,665 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-17 00:41:37,668 [ scc.git] DEBUG c1b8fefc8 Merge pull request #606 from knabar/fix-large-channel-count
2025-06-17 00:41:37,668 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-17 00:41:37,713 [ scc.config] DEBUG Found remote.origin.url
2025-06-17 00:41:37,868 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:38,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2025-06-17 00:41:38,372 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:38,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-17 00:41:38,845 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:39,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-17 00:41:39,293 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:39,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-17 00:41:39,727 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:39,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-17 00:41:39,912 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-17 00:41:39,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-17 00:41:39,953 [ scc.git] DEBUG Resetting...
2025-06-17 00:41:39,953 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-06-17 00:41:39,957 [ scc.git] DEBUG HEAD is now at 99a11f4 merge master -Dorg -Snone
2025-06-17 00:41:39,957 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-06-17 00:41:40,018 [ scc.git] DEBUG Submodule path 'omero-py': checked out '58ff255d01a78a01f22fd905829c25bfb1a0fbe7'
2025-06-17 00:41:40,035 [ scc.git] DEBUG Submodule path 'omero-scripts': checked out '950b28b31e228ae7b317cbd159235faf4023e4dc'
2025-06-17 00:41:40,043 [ scc.git] DEBUG Check current status
2025-06-17 00:41:40,043 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-17 00:41:40,045 [ scc.git] DEBUG 99a11f4 merge master -Dorg -Snone
2025-06-17 00:41:40,046 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-17 00:41:40,087 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-06-17 00:41:40,090 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-06-17 00:41:40,099 [ scc.git] DEBUG 58ff255d01a78a01f22fd905829c25bfb1a0fbe7 omero-py (v5.20.0-24-g58ff255d)
2025-06-17 00:41:40,104 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b)
2025-06-17 00:41:40,109 [ scc.git] DEBUG c1b8fefc872c1cadf5daba9476b405c59016abd5 omero-web (v5.29.0-5-gc1b8fefc8)
2025-06-17 00:41:40,110 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-06-17 00:41:40,110 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-06-17 00:41:40,110 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-06-17 00:41:40,110 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-06-17 00:41:40,110 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-06-17 00:41:40,110 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-06-17 00:41:40,110 [ scc.repo] DEBUG ## PRs found:
2025-06-17 00:41:40,162 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:40,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2025-06-17 00:41:40,666 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:40,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/322 HTTP/1.1" 200 None
2025-06-17 00:41:40,897 [ scc.repo] DEBUG # ... Include label: dependencies
2025-06-17 00:41:41,148 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:41,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/026772861d363d931c7907b901be2c3a48401cf0 HTTP/1.1" 200 None
2025-06-17 00:41:41,739 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:41,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/026772861d363d931c7907b901be2c3a48401cf0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:41:42,238 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:42,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/026772861d363d931c7907b901be2c3a48401cf0 HTTP/1.1" 200 None
2025-06-17 00:41:42,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:43,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/026772861d363d931c7907b901be2c3a48401cf0?per_page=1 HTTP/1.1" 200 2
2025-06-17 00:41:43,033 [ scc.repo] DEBUG - PR 322 dependabot[bot] 'Bump omero-py from `e485be4` to `58ff255`'
2025-06-17 00:41:43,284 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:43,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/320 HTTP/1.1" 200 None
2025-06-17 00:41:43,537 [ scc.repo] DEBUG # ... Include label: dependencies
2025-06-17 00:41:43,788 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:44,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/1a784439f1291b60e07536b5e1fccabf5d90baa1 HTTP/1.1" 200 None
2025-06-17 00:41:44,368 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:44,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/1a784439f1291b60e07536b5e1fccabf5d90baa1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:41:44,910 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:45,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/1a784439f1291b60e07536b5e1fccabf5d90baa1 HTTP/1.1" 200 None
2025-06-17 00:41:45,461 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:45,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/1a784439f1291b60e07536b5e1fccabf5d90baa1?per_page=1 HTTP/1.1" 200 2
2025-06-17 00:41:45,645 [ scc.repo] DEBUG - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`'
2025-06-17 00:41:45,645 [ scc.repo] DEBUG ## Branches found:
2025-06-17 00:41:45,645 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:41:45,645 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:41:45,648 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-17 00:41:45,650 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-17 00:41:45,650 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-17 00:41:45,653 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-17 00:41:45,656 [ scc.git] DEBUG Already up to date.
2025-06-17 00:41:45,657 [ scc.git] DEBUG Calling 'git fetch origin pull/320/head'
2025-06-17 00:41:45,929 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2025-06-17 00:41:45,929 [ scc.git] DEBUG * branch refs/pull/320/head -> FETCH_HEAD
2025-06-17 00:41:45,936 [ scc.git] DEBUG Calling 'git fetch origin pull/322/head'
2025-06-17 00:41:46,240 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2025-06-17 00:41:46,240 [ scc.git] DEBUG * branch refs/pull/322/head -> FETCH_HEAD
2025-06-17 00:41:46,247 [ scc.git] DEBUG ## Unique users: []
2025-06-17 00:41:46,247 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:41:46,247 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:41:46,249 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a784439f1291b60e07536b5e1fccabf5d90baa1'
2025-06-17 00:41:46,252 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:41:46,254 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 320 (Bump omero-web from `4b979f8` to `c1b8fef`) 1a784439f1291b60e07536b5e1fccabf5d90baa1'
2025-06-17 00:41:46,257 [ scc.git] DEBUG Already up to date.
2025-06-17 00:41:46,259 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:46,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:41:46,419 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...026772861d363d931c7907b901be2c3a48401cf0'
2025-06-17 00:41:46,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:41:46,424 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 322 (Bump omero-py from `e485be4` to `58ff255`) 026772861d363d931c7907b901be2c3a48401cf0'
2025-06-17 00:41:46,427 [ scc.git] DEBUG Already up to date.
2025-06-17 00:41:46,670 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:46,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:41:46,850 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-17 00:41:46,895 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:41:46,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:41:46,897 [ scc.repo] DEBUG ## PRs found:
2025-06-17 00:41:47,101 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:47,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2025-06-17 00:41:47,668 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:47,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2025-06-17 00:41:48,178 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:48,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2025-06-17 00:41:48,682 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:49,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2025-06-17 00:41:49,274 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:49,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:41:49,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:50,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2025-06-17 00:41:50,296 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:50,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2025-06-17 00:41:50,486 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2025-06-17 00:41:50,486 [ scc.repo] DEBUG ## Branches found:
2025-06-17 00:41:50,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-06-17 00:41:50,486 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:41:50,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:41:50,489 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-17 00:41:50,491 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-17 00:41:50,492 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-17 00:41:50,495 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-17 00:41:50,498 [ scc.git] DEBUG Already up to date.
2025-06-17 00:41:50,498 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2025-06-17 00:41:50,799 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2025-06-17 00:41:50,799 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2025-06-17 00:41:50,803 [ scc.git] DEBUG ## Unique users: []
2025-06-17 00:41:50,803 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:41:50,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:41:50,806 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2025-06-17 00:41:50,810 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:41:50,812 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2025-06-17 00:41:50,826 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2025-06-17 00:41:50,826 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2025-06-17 00:41:50,826 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2025-06-17 00:41:50,826 [ scc.git] DEBUG Auto-merging src/fsLists.py
2025-06-17 00:41:50,826 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2025-06-17 00:41:50,826 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2025-06-17 00:41:50,826 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2025-06-17 00:41:50,826 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2025-06-17 00:41:50,826 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2025-06-17 00:41:50,827 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:41:50,831 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2025-06-17 00:41:50,831 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2025-06-17 00:41:50,831 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2025-06-17 00:41:50,831 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2025-06-17 00:41:50,831 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2025-06-17 00:41:50,831 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2025-06-17 00:41:50,831 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2025-06-17 00:41:50,831 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2025-06-17 00:41:50,832 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2025-06-17 00:41:50,832 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:50,833 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2025-06-17 00:41:51,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:41:51,005 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-17 00:41:51,050 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:41:51,050 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:41:51,052 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-17 00:41:51,093 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-17 00:41:51,097 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffac5bf6ad0> has no local changes
2025-06-17 00:41:51,097 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#439 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/439/)'
2025-06-17 00:41:51,104 [ scc.git] DEBUG [detached HEAD f04d550] merge master -Dorg -Ssuccess-only
2025-06-17 00:41:51,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-17 00:41:51,105 [ scc.repo] DEBUG ## PRs found:
2025-06-17 00:41:51,256 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:51,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2025-06-17 00:41:51,794 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:52,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2025-06-17 00:41:52,285 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:52,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2025-06-17 00:41:52,758 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:52,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2025-06-17 00:41:53,212 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:53,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2025-06-17 00:41:53,681 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:53,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2025-06-17 00:41:54,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:54,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:41:54,682 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:54,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2025-06-17 00:41:55,240 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:55,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2025-06-17 00:41:55,443 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2025-06-17 00:41:55,693 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:55,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2025-06-17 00:41:56,191 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:56,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2025-06-17 00:41:56,715 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:56,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2025-06-17 00:41:57,188 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:57,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2025-06-17 00:41:57,384 [ scc.repo] DEBUG ## Branches found:
2025-06-17 00:41:57,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-06-17 00:41:57,384 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:41:57,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:41:57,387 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-17 00:41:57,390 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-17 00:41:57,390 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-17 00:41:57,393 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-17 00:41:57,396 [ scc.git] DEBUG Already up to date.
2025-06-17 00:41:57,396 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2025-06-17 00:41:57,735 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2025-06-17 00:41:57,735 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2025-06-17 00:41:57,739 [ scc.git] DEBUG ## Unique users: []
2025-06-17 00:41:57,739 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:41:57,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:41:57,742 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2025-06-17 00:41:57,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:41:57,748 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2025-06-17 00:41:57,758 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2025-06-17 00:41:57,759 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:41:57,762 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2025-06-17 00:41:57,762 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2025-06-17 00:41:57,762 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2025-06-17 00:41:57,764 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:57,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:41:57,937 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-17 00:41:57,979 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:41:57,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:41:57,981 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-17 00:41:58,023 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-17 00:41:58,027 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffac84e2d90> has no local changes
2025-06-17 00:41:58,027 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#439 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/439/)'
2025-06-17 00:41:58,033 [ scc.git] DEBUG [detached HEAD 100e269] merge master -Dorg -Ssuccess-only
2025-06-17 00:41:58,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-17 00:41:58,034 [ scc.repo] DEBUG ## PRs found:
2025-06-17 00:41:58,188 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:58,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2025-06-17 00:41:58,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:59,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/462 HTTP/1.1" 200 None
2025-06-17 00:41:59,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:41:59,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/a23322e0dfaf9a983175b8795fcd580e9b36a614 HTTP/1.1" 200 None
2025-06-17 00:41:59,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:00,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/a23322e0dfaf9a983175b8795fcd580e9b36a614/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:00,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:00,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/a23322e0dfaf9a983175b8795fcd580e9b36a614/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-17 00:42:00,839 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:01,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/a23322e0dfaf9a983175b8795fcd580e9b36a614 HTTP/1.1" 200 None
2025-06-17 00:42:01,342 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:01,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/a23322e0dfaf9a983175b8795fcd580e9b36a614?per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:01,766 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:01,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/a23322e0dfaf9a983175b8795fcd580e9b36a614 HTTP/1.1" 200 None
2025-06-17 00:42:02,220 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:02,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/a23322e0dfaf9a983175b8795fcd580e9b36a614/status HTTP/1.1" 200 None
2025-06-17 00:42:02,402 [ scc.repo] DEBUG - PR 462 jburel 'Use windows-latest'
2025-06-17 00:42:02,653 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:02,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None
2025-06-17 00:42:03,153 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:03,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None
2025-06-17 00:42:03,633 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:03,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None
2025-06-17 00:42:04,153 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:04,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None
2025-06-17 00:42:04,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:04,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None
2025-06-17 00:42:04,916 [ scc.repo] DEBUG # ... Exclude label: exclude
2025-06-17 00:42:05,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:05,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2025-06-17 00:42:05,653 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:05,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2025-06-17 00:42:06,137 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:06,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2025-06-17 00:42:06,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:06,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:07,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:07,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2025-06-17 00:42:07,632 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:07,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 2
2025-06-17 00:42:07,817 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2025-06-17 00:42:08,068 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:08,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2025-06-17 00:42:08,535 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:08,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2025-06-17 00:42:09,008 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:09,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2025-06-17 00:42:09,504 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:09,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:10,021 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:10,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-17 00:42:10,516 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:10,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2025-06-17 00:42:10,985 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:11,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None
2025-06-17 00:42:11,510 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:11,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2025-06-17 00:42:12,138 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:12,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:12,603 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:12,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2025-06-17 00:42:13,149 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:13,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2025-06-17 00:42:13,346 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2025-06-17 00:42:13,597 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:13,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2025-06-17 00:42:14,081 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:14,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2025-06-17 00:42:14,600 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:14,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2025-06-17 00:42:15,102 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:15,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:15,581 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:15,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2025-06-17 00:42:16,030 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:16,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2
2025-06-17 00:42:16,211 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2025-06-17 00:42:16,462 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:16,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2025-06-17 00:42:16,936 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:17,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2025-06-17 00:42:17,504 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:17,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2025-06-17 00:42:17,983 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:18,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2025-06-17 00:42:18,506 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:18,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2025-06-17 00:42:19,047 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:19,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:19,504 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:19,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2025-06-17 00:42:20,007 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:20,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2025-06-17 00:42:20,204 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2025-06-17 00:42:20,205 [ scc.repo] DEBUG ## Branches found:
2025-06-17 00:42:20,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-06-17 00:42:20,205 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:42:20,205 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:42:20,208 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-17 00:42:20,211 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-17 00:42:20,211 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-17 00:42:20,214 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-17 00:42:20,224 [ scc.git] DEBUG Updating 58ff255d..1d15ade0
2025-06-17 00:42:20,224 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2025-06-17 00:42:20,576 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-17 00:42:20,576 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2025-06-17 00:42:20,580 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2025-06-17 00:42:20,864 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-17 00:42:20,864 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2025-06-17 00:42:20,869 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2025-06-17 00:42:21,165 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-17 00:42:21,165 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2025-06-17 00:42:21,169 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2025-06-17 00:42:21,470 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-17 00:42:21,470 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2025-06-17 00:42:21,475 [ scc.git] DEBUG Calling 'git fetch origin pull/462/head'
2025-06-17 00:42:21,899 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-17 00:42:21,899 [ scc.git] DEBUG * branch refs/pull/462/head -> FETCH_HEAD
2025-06-17 00:42:21,902 [ scc.git] DEBUG ## Unique users: []
2025-06-17 00:42:21,903 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:42:21,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:42:21,905 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2025-06-17 00:42:21,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:42:21,920 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2025-06-17 00:42:21,943 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2025-06-17 00:42:21,944 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2025-06-17 00:42:21,945 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:42:21,949 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2025-06-17 00:42:21,949 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2025-06-17 00:42:21,949 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2025-06-17 00:42:21,950 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:22,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:42:22,122 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2025-06-17 00:42:22,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:42:22,137 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2025-06-17 00:42:22,157 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:42:22,160 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2025-06-17 00:42:22,160 [ scc.git] DEBUG connect.py | 11 +++++++++++
2025-06-17 00:42:22,160 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2025-06-17 00:42:22,160 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2025-06-17 00:42:22,160 [ scc.git] DEBUG create mode 100644 connect.py
2025-06-17 00:42:22,373 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:22,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:42:22,538 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2025-06-17 00:42:22,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:42:22,553 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2025-06-17 00:42:22,575 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2025-06-17 00:42:22,576 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:42:22,580 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2025-06-17 00:42:22,580 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2025-06-17 00:42:22,789 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:22,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:42:22,965 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2025-06-17 00:42:22,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:42:22,980 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2025-06-17 00:42:23,014 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2025-06-17 00:42:23,015 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:42:23,022 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2025-06-17 00:42:23,022 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2025-06-17 00:42:23,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:23,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:42:23,379 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a23322e0dfaf9a983175b8795fcd580e9b36a614'
2025-06-17 00:42:23,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:42:23,394 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 462 (Use windows-latest) a23322e0dfaf9a983175b8795fcd580e9b36a614'
2025-06-17 00:42:23,417 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:42:23,420 [ scc.git] DEBUG .github/workflows/workflow.yml | 2 +-
2025-06-17 00:42:23,420 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-06-17 00:42:23,630 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:23,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:42:23,799 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-17 00:42:23,841 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:42:23,841 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:42:23,844 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-17 00:42:23,885 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-17 00:42:23,892 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffac5a8c410> has no local changes
2025-06-17 00:42:23,892 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
- PR 450 multimeric 'Add model stubs' (user: multimeric)
- PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment)
Updating 58ff255d..1d15ade0
Previously merged:
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 332 jburel 'Build conda'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 462 jburel 'Use windows-latest'
Generated by OMERO-python-superbuild-push#439 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/439/)'
2025-06-17 00:42:23,902 [ scc.git] DEBUG [detached HEAD f32c9206] merge master -Dorg -Ssuccess-only
2025-06-17 00:42:23,902 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-17 00:42:23,902 [ scc.git] INFO Overriding base-branch from master to develop
2025-06-17 00:42:23,902 [ scc.repo] DEBUG ## PRs found:
2025-06-17 00:42:24,050 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:24,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-06-17 00:42:24,679 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:24,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-06-17 00:42:25,151 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:25,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-06-17 00:42:25,622 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:25,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-06-17 00:42:26,142 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:26,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:26,614 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:26,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-17 00:42:27,105 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:27,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-06-17 00:42:27,610 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:27,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-06-17 00:42:27,792 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-06-17 00:42:28,042 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:28,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-06-17 00:42:28,505 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:28,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-06-17 00:42:28,958 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:29,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-06-17 00:42:29,465 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:29,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:29,931 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:30,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-06-17 00:42:30,445 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:30,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-06-17 00:42:30,626 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-06-17 00:42:30,877 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:31,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-06-17 00:42:31,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:31,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-06-17 00:42:31,920 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:32,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-06-17 00:42:32,400 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:32,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-06-17 00:42:32,733 [ scc.repo] DEBUG ## Branches found:
2025-06-17 00:42:32,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-06-17 00:42:32,734 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:42:32,734 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:42:32,737 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-06-17 00:42:32,739 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-17 00:42:32,739 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-06-17 00:42:32,743 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-06-17 00:42:32,753 [ scc.git] DEBUG Updating 950b28b..573db34
2025-06-17 00:42:32,983 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:33,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None
2025-06-17 00:42:33,391 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-06-17 00:42:33,700 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2025-06-17 00:42:33,700 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-06-17 00:42:33,704 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-06-17 00:42:34,025 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2025-06-17 00:42:34,025 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-06-17 00:42:34,029 [ scc.git] DEBUG ## Unique users: []
2025-06-17 00:42:34,029 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:42:34,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:42:34,032 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-06-17 00:42:34,038 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:42:34,040 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-06-17 00:42:34,051 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-06-17 00:42:34,052 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-06-17 00:42:34,052 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-06-17 00:42:34,055 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150'
2025-06-17 00:42:34,059 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0
2025-06-17 00:42:34,061 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:34,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:42:34,212 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-06-17 00:42:34,218 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150'
2025-06-17 00:42:34,222 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#439](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/439/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/439/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-06-17 00:42:34,224 [ scc.config] DEBUG Found github.token
2025-06-17 00:42:34,224 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-06-17 00:42:34,224 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-06-17 00:42:34,229 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:42:34,231 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-06-17 00:42:34,241 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:42:34,244 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-06-17 00:42:34,244 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-06-17 00:42:34,463 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:34,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:42:34,622 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-17 00:42:34,663 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:42:34,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:42:34,665 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-17 00:42:34,706 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-17 00:42:34,709 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffac5ad8810> has no local changes
2025-06-17 00:42:34,710 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 950b28b..573db34
Previously merged:
- PR 227 jburel 'Replace tostring by tobytes'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#439 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/439/)'
2025-06-17 00:42:34,716 [ scc.git] DEBUG [detached HEAD 113d076] merge master -Dorg -Ssuccess-only
2025-06-17 00:42:34,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-17 00:42:34,717 [ scc.repo] DEBUG ## PRs found:
2025-06-17 00:42:34,873 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:35,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2025-06-17 00:42:35,612 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:35,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/623 HTTP/1.1" 200 None
2025-06-17 00:42:36,085 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:36,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/623/comments HTTP/1.1" 200 None
2025-06-17 00:42:36,552 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:36,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/0343a1acda423eef3ca919c785761c5963a0b353 HTTP/1.1" 200 None
2025-06-17 00:42:37,064 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:37,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/0343a1acda423eef3ca919c785761c5963a0b353/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:37,560 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:37,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/0343a1acda423eef3ca919c785761c5963a0b353/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-17 00:42:38,044 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:38,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/0343a1acda423eef3ca919c785761c5963a0b353 HTTP/1.1" 200 None
2025-06-17 00:42:38,544 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:38,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/0343a1acda423eef3ca919c785761c5963a0b353?per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:38,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:39,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/0343a1acda423eef3ca919c785761c5963a0b353 HTTP/1.1" 200 None
2025-06-17 00:42:39,453 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:39,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/0343a1acda423eef3ca919c785761c5963a0b353/status HTTP/1.1" 200 None
2025-06-17 00:42:39,643 [ scc.repo] DEBUG - PR 623 jburel 'Replace fromstring by frombytes'
2025-06-17 00:42:39,894 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:40,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/621 HTTP/1.1" 200 None
2025-06-17 00:42:40,402 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:40,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956 HTTP/1.1" 200 None
2025-06-17 00:42:40,942 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:41,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:41,450 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:41,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-17 00:42:41,978 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:42,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956 HTTP/1.1" 200 None
2025-06-17 00:42:42,523 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:42,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1f6b7dc5e59341f99678864923ba89565ce27956?per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:42,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:43,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956 HTTP/1.1" 200 None
2025-06-17 00:42:43,422 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:43,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956/status HTTP/1.1" 200 None
2025-06-17 00:42:43,620 [ scc.repo] DEBUG - PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset'
2025-06-17 00:42:43,871 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:44,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None
2025-06-17 00:42:44,341 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:44,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None
2025-06-17 00:42:44,882 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:45,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:45,374 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:45,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-17 00:42:45,884 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:46,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None
2025-06-17 00:42:46,334 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:46,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:46,799 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:47,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None
2025-06-17 00:42:47,270 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:47,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None
2025-06-17 00:42:47,469 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins'
2025-06-17 00:42:47,720 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:47,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/617 HTTP/1.1" 200 None
2025-06-17 00:42:48,205 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:48,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/616 HTTP/1.1" 200 None
2025-06-17 00:42:48,684 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:48,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None
2025-06-17 00:42:49,198 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:49,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:49,703 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:49,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-17 00:42:50,203 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:50,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None
2025-06-17 00:42:50,717 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:50,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/c6401a8d78f907d300ef6a6bb673efa86374ecc4?per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:51,161 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:51,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None
2025-06-17 00:42:51,620 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:51,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/status HTTP/1.1" 200 None
2025-06-17 00:42:51,829 [ scc.repo] DEBUG - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-06-17 00:42:52,080 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:52,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614 HTTP/1.1" 200 None
2025-06-17 00:42:52,565 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:52,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614/comments HTTP/1.1" 200 None
2025-06-17 00:42:53,072 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:53,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None
2025-06-17 00:42:53,580 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:53,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:54,081 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:54,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-17 00:42:54,643 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:54,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None
2025-06-17 00:42:55,150 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:55,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/da14d11b161eb8aa90a6e4729758ea504d5914e3?per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:55,594 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:55,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None
2025-06-17 00:42:56,198 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:56,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/status HTTP/1.1" 200 None
2025-06-17 00:42:56,401 [ scc.repo] DEBUG - PR 614 sbesson 'CodeQL workflow updates'
2025-06-17 00:42:56,651 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:56,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None
2025-06-17 00:42:57,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:57,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None
2025-06-17 00:42:57,665 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:57,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None
2025-06-17 00:42:58,197 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:58,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:42:58,702 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:58,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-17 00:42:59,222 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:59,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None
2025-06-17 00:42:59,744 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:42:59,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/cca34cb278cac5fb8088df75cc4fe5f315810342?per_page=1 HTTP/1.1" 200 None
2025-06-17 00:43:00,189 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:00,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None
2025-06-17 00:43:00,661 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:00,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/status HTTP/1.1" 200 None
2025-06-17 00:43:00,874 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display'
2025-06-17 00:43:01,125 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:01,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None
2025-06-17 00:43:01,608 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:01,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None
2025-06-17 00:43:02,136 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:02,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-06-17 00:43:02,674 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:02,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:43:03,175 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:03,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-17 00:43:03,689 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:03,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-06-17 00:43:04,196 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:04,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None
2025-06-17 00:43:04,679 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:04,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-06-17 00:43:05,190 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:05,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None
2025-06-17 00:43:05,384 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2025-06-17 00:43:05,635 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:05,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2025-06-17 00:43:06,103 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:06,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2025-06-17 00:43:06,601 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:06,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-06-17 00:43:07,170 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:07,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:43:07,673 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:07,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-17 00:43:08,165 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:08,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-06-17 00:43:08,687 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:08,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2025-06-17 00:43:09,143 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:09,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-06-17 00:43:09,605 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:09,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2025-06-17 00:43:09,807 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf'
2025-06-17 00:43:10,058 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:10,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2025-06-17 00:43:10,569 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:10,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-06-17 00:43:11,092 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:11,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:43:11,607 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:11,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-17 00:43:12,107 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:12,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-06-17 00:43:12,621 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:12,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None
2025-06-17 00:43:13,072 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:13,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-06-17 00:43:13,518 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:13,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None
2025-06-17 00:43:13,728 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2025-06-17 00:43:13,979 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:14,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None
2025-06-17 00:43:14,451 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:14,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None
2025-06-17 00:43:14,915 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:15,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-06-17 00:43:15,440 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:15,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:43:15,941 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:16,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-17 00:43:16,418 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:16,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-06-17 00:43:16,962 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:17,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None
2025-06-17 00:43:17,404 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:17,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-06-17 00:43:17,890 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:18,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None
2025-06-17 00:43:18,169 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag'
2025-06-17 00:43:18,420 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:18,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None
2025-06-17 00:43:18,912 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:19,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None
2025-06-17 00:43:19,371 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:19,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-06-17 00:43:19,873 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:20,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:43:20,360 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:20,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-17 00:43:20,858 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:21,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-06-17 00:43:21,375 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:21,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None
2025-06-17 00:43:21,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:22,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-06-17 00:43:22,293 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:22,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None
2025-06-17 00:43:22,489 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters'
2025-06-17 00:43:22,739 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:23,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2025-06-17 00:43:23,253 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:23,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2025-06-17 00:43:23,712 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:23,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2025-06-17 00:43:24,195 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:24,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2025-06-17 00:43:24,715 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:24,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2025-06-17 00:43:25,241 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:25,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:43:25,710 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:25,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2025-06-17 00:43:26,241 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:26,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2
2025-06-17 00:43:26,448 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2025-06-17 00:43:26,699 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:26,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2025-06-17 00:43:27,182 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:27,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2025-06-17 00:43:27,689 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:27,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2025-06-17 00:43:28,220 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:28,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:43:28,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:29,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2025-06-17 00:43:29,262 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:29,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2
2025-06-17 00:43:29,480 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2025-06-17 00:43:29,731 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:29,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2025-06-17 00:43:30,223 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:30,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2025-06-17 00:43:30,735 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:31,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2025-06-17 00:43:31,264 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:31,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-17 00:43:31,877 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:32,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-17 00:43:32,110 [ scc.repo] DEBUG ## Branches found:
2025-06-17 00:43:32,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-06-17 00:43:32,111 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:43:32,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:43:32,114 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-17 00:43:32,117 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-17 00:43:32,117 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-17 00:43:32,120 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-17 00:43:32,124 [ scc.git] DEBUG Already up to date.
2025-06-17 00:43:32,124 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2025-06-17 00:43:32,417 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-17 00:43:32,418 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2025-06-17 00:43:32,422 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2025-06-17 00:43:32,722 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-17 00:43:32,722 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2025-06-17 00:43:32,726 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head'
2025-06-17 00:43:33,004 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-17 00:43:33,004 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD
2025-06-17 00:43:33,009 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head'
2025-06-17 00:43:33,282 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-17 00:43:33,282 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD
2025-06-17 00:43:33,287 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2025-06-17 00:43:33,560 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-17 00:43:33,560 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2025-06-17 00:43:33,565 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2025-06-17 00:43:33,844 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-17 00:43:33,844 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2025-06-17 00:43:33,849 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head'
2025-06-17 00:43:34,106 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-17 00:43:34,107 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD
2025-06-17 00:43:34,111 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head'
2025-06-17 00:43:34,391 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-17 00:43:34,392 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD
2025-06-17 00:43:34,396 [ scc.git] DEBUG Calling 'git fetch origin pull/614/head'
2025-06-17 00:43:34,687 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-17 00:43:34,687 [ scc.git] DEBUG * branch refs/pull/614/head -> FETCH_HEAD
2025-06-17 00:43:34,691 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head'
2025-06-17 00:43:34,983 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-17 00:43:34,983 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD
2025-06-17 00:43:34,987 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head'
2025-06-17 00:43:35,247 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-17 00:43:35,247 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD
2025-06-17 00:43:35,252 [ scc.git] DEBUG Calling 'git fetch origin pull/621/head'
2025-06-17 00:43:35,527 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-17 00:43:35,527 [ scc.git] DEBUG * branch refs/pull/621/head -> FETCH_HEAD
2025-06-17 00:43:35,532 [ scc.git] DEBUG Calling 'git fetch origin pull/623/head'
2025-06-17 00:43:35,819 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-17 00:43:35,819 [ scc.git] DEBUG * branch refs/pull/623/head -> FETCH_HEAD
2025-06-17 00:43:35,824 [ scc.git] DEBUG ## Unique users: []
2025-06-17 00:43:35,824 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:43:35,824 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:43:35,826 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2025-06-17 00:43:35,834 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:43:35,836 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2025-06-17 00:43:35,857 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2025-06-17 00:43:35,857 [ scc.git] DEBUG Auto-merging setup.py
2025-06-17 00:43:35,859 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:43:35,863 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2025-06-17 00:43:35,863 [ scc.git] DEBUG setup.py | 1 +
2025-06-17 00:43:35,863 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2025-06-17 00:43:35,864 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:36,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:43:36,025 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2025-06-17 00:43:36,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:43:36,036 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2025-06-17 00:43:36,057 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2025-06-17 00:43:36,057 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2025-06-17 00:43:36,059 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:43:36,063 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2025-06-17 00:43:36,063 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2025-06-17 00:43:36,063 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2025-06-17 00:43:36,276 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:36,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:43:36,447 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb'
2025-06-17 00:43:36,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:43:36,457 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb'
2025-06-17 00:43:36,478 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:43:36,482 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +-
2025-06-17 00:43:36,482 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-06-17 00:43:36,698 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:36,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:43:36,893 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8'
2025-06-17 00:43:36,902 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:43:36,904 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8'
2025-06-17 00:43:36,926 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:43:36,930 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++--
2025-06-17 00:43:36,930 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2025-06-17 00:43:37,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:37,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:43:37,305 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539'
2025-06-17 00:43:37,314 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:43:37,316 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539'
2025-06-17 00:43:37,338 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:43:37,344 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2025-06-17 00:43:37,344 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2025-06-17 00:43:37,344 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++-
2025-06-17 00:43:37,344 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2025-06-17 00:43:37,344 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2025-06-17 00:43:37,344 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2025-06-17 00:43:37,345 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2025-06-17 00:43:37,345 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++-----
2025-06-17 00:43:37,345 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2025-06-17 00:43:37,345 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2025-06-17 00:43:37,345 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++--
2025-06-17 00:43:37,345 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-)
2025-06-17 00:43:37,556 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:37,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:43:37,719 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2025-06-17 00:43:37,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:43:37,730 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2025-06-17 00:43:37,757 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2025-06-17 00:43:37,759 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:43:37,765 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2025-06-17 00:43:37,765 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2025-06-17 00:43:37,765 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2025-06-17 00:43:37,765 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2025-06-17 00:43:37,970 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:38,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:43:38,131 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26'
2025-06-17 00:43:38,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:43:38,142 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26'
2025-06-17 00:43:38,164 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:43:38,168 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++
2025-06-17 00:43:38,168 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++----------
2025-06-17 00:43:38,168 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-)
2025-06-17 00:43:38,382 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:38,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:43:38,561 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cca34cb278cac5fb8088df75cc4fe5f315810342'
2025-06-17 00:43:38,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:43:38,572 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) cca34cb278cac5fb8088df75cc4fe5f315810342'
2025-06-17 00:43:38,593 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:43:38,598 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 20 ++++++++++++--
2025-06-17 00:43:38,598 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 +++++++++++++++-------
2025-06-17 00:43:38,598 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 ++
2025-06-17 00:43:38,598 [ scc.git] DEBUG 3 files changed, 42 insertions(+), 11 deletions(-)
2025-06-17 00:43:38,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:38,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:43:38,964 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da14d11b161eb8aa90a6e4729758ea504d5914e3'
2025-06-17 00:43:38,973 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:43:38,975 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 614 (CodeQL workflow updates) da14d11b161eb8aa90a6e4729758ea504d5914e3'
2025-06-17 00:43:38,995 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:43:38,998 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 55 +++++++----------------------------
2025-06-17 00:43:38,999 [ scc.git] DEBUG 1 file changed, 11 insertions(+), 44 deletions(-)
2025-06-17 00:43:39,215 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:39,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:43:39,391 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6401a8d78f907d300ef6a6bb673efa86374ecc4'
2025-06-17 00:43:39,400 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:43:39,402 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Use the release/v1 branch for the PyPA action publishing to PyPI) c6401a8d78f907d300ef6a6bb673efa86374ecc4'
2025-06-17 00:43:39,421 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:43:39,425 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-06-17 00:43:39,425 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-06-17 00:43:39,642 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:39,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:43:39,797 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac'
2025-06-17 00:43:39,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:43:39,808 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac'
2025-06-17 00:43:39,829 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2025-06-17 00:43:39,831 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:43:39,835 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++-----
2025-06-17 00:43:39,835 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-)
2025-06-17 00:43:40,048 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:40,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:43:40,217 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f6b7dc5e59341f99678864923ba89565ce27956'
2025-06-17 00:43:40,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:43:40,228 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 621 (/webgateway/original_file_paths: handle images without Fileset) 1f6b7dc5e59341f99678864923ba89565ce27956'
2025-06-17 00:43:40,249 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:43:40,254 [ scc.git] DEBUG omeroweb/webgateway/views.py | 2 ++
2025-06-17 00:43:40,254 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2025-06-17 00:43:40,468 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:40,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:43:40,629 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0343a1acda423eef3ca919c785761c5963a0b353'
2025-06-17 00:43:40,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:43:40,640 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 623 (Replace fromstring by frombytes) 0343a1acda423eef3ca919c785761c5963a0b353'
2025-06-17 00:43:40,664 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2025-06-17 00:43:40,666 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-17 00:43:40,671 [ scc.git] DEBUG omeroweb/webgateway/views.py | 2 +-
2025-06-17 00:43:40,671 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-06-17 00:43:40,879 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:41,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:43:41,052 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-17 00:43:41,096 [ scc.git] DEBUG Get sha1 of %s
2025-06-17 00:43:41,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-17 00:43:41,098 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-17 00:43:41,139 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-17 00:43:41,148 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffac5bfc410> has no local changes
2025-06-17 00:43:41,148 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 595 sukunis 'linkify supports urls that include {}[] characters'
- PR 596 sukunis 'Linkify can parse anchor tag'
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 613 will-moore 'externalInfo display'
- PR 614 sbesson 'CodeQL workflow updates'
- PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset'
- PR 623 jburel 'Replace fromstring by frombytes'
Generated by OMERO-python-superbuild-push#439 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/439/)'
2025-06-17 00:43:41,157 [ scc.git] DEBUG [detached HEAD 358905b62] merge master -Dorg -Ssuccess-only
2025-06-17 00:43:41,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-17 00:43:41,157 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-17 00:43:41,208 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2025-06-17 00:43:41,303 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:41,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:43:41,489 [ scc.config] DEBUG Found submodule.omero-marshal.url
2025-06-17 00:43:41,733 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:41,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:43:41,902 [ scc.config] DEBUG Found submodule.omero-py.url
2025-06-17 00:43:42,145 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:42,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:43:42,319 [ scc.config] DEBUG Found submodule.omero-scripts.url
2025-06-17 00:43:42,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:42,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:43:42,730 [ scc.config] DEBUG Found submodule.omero-web.url
2025-06-17 00:43:42,973 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-17 00:43:43,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-17 00:43:43,151 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-17 00:43:43,182 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffac5b5d6d0> has local changes
2025-06-17 00:43:43,182 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`'
- PR 322 dependabot[bot] 'Bump omero-py from `e485be4` to `58ff255`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
- PR 450 multimeric 'Add model stubs' (user: multimeric)
- PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment)
Updating 58ff255d..1d15ade0
Previously merged:
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 332 jburel 'Build conda'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 462 jburel 'Use windows-latest'
Repository: ome/omero-scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 950b28b..573db34
Previously merged:
- PR 227 jburel 'Replace tostring by tobytes'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 595 sukunis 'linkify supports urls that include {}[] characters'
- PR 596 sukunis 'Linkify can parse anchor tag'
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 613 will-moore 'externalInfo display'
- PR 614 sbesson 'CodeQL workflow updates'
- PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset'
- PR 623 jburel 'Replace fromstring by frombytes'
Generated by OMERO-python-superbuild-push#439 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/439/)'
2025-06-17 00:43:43,190 [ scc.git] DEBUG [detached HEAD 1b75c03] merge master -Dorg -Ssuccess-only
2025-06-17 00:43:43,190 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2025-06-17 00:43:43,190 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2025-06-17 00:43:43,190 [ scc.merge] INFO Already up to date.
2025-06-17 00:43:43,190 [ scc.merge] INFO
2025-06-17 00:43:43,190 [ scc.merge] INFO Merged PRs:
2025-06-17 00:43:43,190 [ scc.merge] INFO - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`'
2025-06-17 00:43:43,191 [ scc.merge] INFO - PR 322 dependabot[bot] 'Bump omero-py from `e485be4` to `58ff255`'
2025-06-17 00:43:43,191 [ scc.merge] INFO
2025-06-17 00:43:43,191 [ scc.merge] INFO Repository: ome/omero-dropbox
2025-06-17 00:43:43,191 [ scc.merge] INFO Already up to date.
2025-06-17 00:43:43,191 [ scc.merge] INFO
2025-06-17 00:43:43,191 [ scc.merge] INFO Merged PRs:
2025-06-17 00:43:43,191 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2025-06-17 00:43:43,191 [ scc.merge] INFO
2025-06-17 00:43:43,191 [ scc.merge] INFO Repository: ome/omero-marshal
2025-06-17 00:43:43,191 [ scc.merge] INFO Excluded PRs:
2025-06-17 00:43:43,191 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2025-06-17 00:43:43,191 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2025-06-17 00:43:43,191 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2025-06-17 00:43:43,191 [ scc.merge] INFO Already up to date.
2025-06-17 00:43:43,191 [ scc.merge] INFO
2025-06-17 00:43:43,191 [ scc.merge] INFO Merged PRs:
2025-06-17 00:43:43,191 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2025-06-17 00:43:43,191 [ scc.merge] INFO
2025-06-17 00:43:43,191 [ scc.merge] INFO Repository: ome/omero-py
2025-06-17 00:43:43,191 [ scc.merge] INFO Excluded PRs:
2025-06-17 00:43:43,191 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
2025-06-17 00:43:43,191 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric)
2025-06-17 00:43:43,191 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
2025-06-17 00:43:43,191 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2025-06-17 00:43:43,191 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment)
2025-06-17 00:43:43,191 [ scc.merge] INFO Updating 58ff255d..1d15ade0
2025-06-17 00:43:43,191 [ scc.merge] INFO Previously merged:
2025-06-17 00:43:43,191 [ scc.merge] INFO
2025-06-17 00:43:43,191 [ scc.merge] INFO Merged PRs:
2025-06-17 00:43:43,191 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2025-06-17 00:43:43,191 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2025-06-17 00:43:43,191 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2025-06-17 00:43:43,191 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2025-06-17 00:43:43,191 [ scc.merge] INFO - PR 462 jburel 'Use windows-latest'
2025-06-17 00:43:43,191 [ scc.merge] INFO
2025-06-17 00:43:43,191 [ scc.merge] INFO Repository: ome/omero-scripts
2025-06-17 00:43:43,191 [ scc.merge] INFO Excluded PRs:
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-06-17 00:43:43,192 [ scc.merge] INFO Updating 950b28b..573db34
2025-06-17 00:43:43,192 [ scc.merge] INFO Previously merged:
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes'
2025-06-17 00:43:43,192 [ scc.merge] INFO
2025-06-17 00:43:43,192 [ scc.merge] INFO Merged PRs:
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-06-17 00:43:43,192 [ scc.merge] INFO
2025-06-17 00:43:43,192 [ scc.merge] INFO Conflicting PRs (not included):
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-06-17 00:43:43,192 [ scc.merge] INFO
2025-06-17 00:43:43,192 [ scc.merge] INFO Repository: ome/omero-web
2025-06-17 00:43:43,192 [ scc.merge] INFO Excluded PRs:
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2025-06-17 00:43:43,192 [ scc.merge] INFO Already up to date.
2025-06-17 00:43:43,192 [ scc.merge] INFO
2025-06-17 00:43:43,192 [ scc.merge] INFO Merged PRs:
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters'
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag'
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf'
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display'
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 614 sbesson 'CodeQL workflow updates'
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins'
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset'
2025-06-17 00:43:43,192 [ scc.merge] INFO - PR 623 jburel 'Replace fromstring by frombytes'
2025-06-17 00:43:43,192 [ scc.merge] INFO
2025-06-17 00:43:43,192 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-06-17 00:43:43,193 [ scc.git] DEBUG Calling 'git remote'
2025-06-17 00:43:43,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-06-17 00:43:43,195 [ scc.git] DEBUG Calling 'git remote'
2025-06-17 00:43:43,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-17 00:43:43,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-06-17 00:43:43,198 [ scc.git] DEBUG Calling 'git remote'
2025-06-17 00:43:43,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-17 00:43:43,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-06-17 00:43:43,200 [ scc.git] DEBUG Calling 'git remote'
2025-06-17 00:43:43,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-17 00:43:43,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-06-17 00:43:43,203 [ scc.git] DEBUG Calling 'git remote'
2025-06-17 00:43:43,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-17 00:43:43,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-06-17 00:43:43,205 [ scc.git] DEBUG Calling 'git remote'
2025-06-17 00:43:43,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from 01fa0c5
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from 6d44f66
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 58ff255d
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 950b28b
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from c1b8fefc8
nothing to commit, working tree clean
HEAD detached from 155f8de
nothing to commit, working tree clean
2025-06-17 00:44:11,946 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS
![[Jenkins]](/jenkins/static/0cb5541d/images/svgs/logo.svg){kind=logo}
