![[Jenkins]](/jenkins/static/f2c3e7bc/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 703 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision b68c3cf06205611a43f501104408df0df16649d6 (refs/remotes/origin/master) Commit message: "Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b68c3cf06205611a43f501104408df0df16649d6 # timeout=10 > git rev-list --no-walk b68c3cf06205611a43f501104408df0df16649d6 # timeout=10 Cleaning workspace [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 601 > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.3-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.3 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.16-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.1-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.8 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.11.12-py3-none-any.whl.metadata (2.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel_yaml_clib-0.2.15-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (3.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.1-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB) Using cached idna-3.11-py3-none-any.whl (71 kB) Using cached certifi-2025.11.12-py3-none-any.whl (159 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.23-py3-none-any.whl (118 kB) Using cached ruamel.yaml-0.18.16-py3-none-any.whl (119 kB) Using cached ruamel_yaml_clib-0.2.15-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (777 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2025.11.12 cffi-2.0.0 charset_normalizer-3.4.4 cryptography-46.0.3 future-1.0.0 idna-3.11 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.1 requests-2.32.5 ruamel.yaml-0.18.16 ruamel.yaml.clib-0.2.15 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-11-23 00:31:25,162 [ scc.config] DEBUG Found github.token 2025-11-23 00:31:25,164 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-11-23 00:31:25,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:31:25,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:31:26,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-11-23 00:31:26,172 [ scc.gh] DEBUG 4322 remaining from 5000 (Reset at 00:11 2025-11-23 00:31:26,172 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-23 00:31:26,175 [ scc.git] DEBUG Check current status 2025-11-23 00:31:26,175 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-23 00:31:26,177 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c 2025-11-23 00:31:26,177 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-23 00:31:26,217 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-11-23 00:31:26,220 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-11-23 00:31:26,227 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5) 2025-11-23 00:31:26,231 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-11-23 00:31:26,235 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-11-23 00:31:26,237 [ scc.config] DEBUG Found remote.origin.url 2025-11-23 00:31:26,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-11-23 00:31:27,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-23 00:31:27,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-23 00:31:28,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-23 00:31:28,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-23 00:31:28,516 [ scc.git] DEBUG Resetting... 2025-11-23 00:31:28,516 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-11-23 00:31:28,520 [ scc.git] DEBUG HEAD is now at b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c 2025-11-23 00:31:28,520 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-11-23 00:31:28,569 [ scc.git] DEBUG Check current status 2025-11-23 00:31:28,569 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-23 00:31:28,571 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c 2025-11-23 00:31:28,571 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-23 00:31:28,608 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-11-23 00:31:28,611 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-11-23 00:31:28,618 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5) 2025-11-23 00:31:28,621 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-11-23 00:31:28,625 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-11-23 00:31:28,626 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-11-23 00:31:28,626 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-11-23 00:31:28,626 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-11-23 00:31:28,626 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-11-23 00:31:28,626 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-11-23 00:31:28,626 [ scc.repo] DEBUG ## PRs found: 2025-11-23 00:31:29,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2025-11-23 00:31:29,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/336 HTTP/1.1" 200 None 2025-11-23 00:31:29,519 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-23 00:31:29,519 [ scc.repo] DEBUG - PR 336 dependabot[bot] 'Bump omero-py from `780876c` to `4a17129`' 2025-11-23 00:31:29,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None 2025-11-23 00:31:29,993 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-23 00:31:29,993 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' 2025-11-23 00:31:29,994 [ scc.repo] DEBUG ## Branches found: 2025-11-23 00:31:29,994 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:31:29,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:31:29,996 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-23 00:31:29,998 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-23 00:31:29,998 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-23 00:31:30,000 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-23 00:31:30,003 [ scc.git] DEBUG Already up to date. 2025-11-23 00:31:30,003 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head' 2025-11-23 00:31:30,290 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-11-23 00:31:30,290 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD 2025-11-23 00:31:30,296 [ scc.git] DEBUG Calling 'git fetch origin pull/336/head' 2025-11-23 00:31:30,555 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-11-23 00:31:30,555 [ scc.git] DEBUG * branch refs/pull/336/head -> FETCH_HEAD 2025-11-23 00:31:30,560 [ scc.git] DEBUG ## Unique users: [] 2025-11-23 00:31:30,560 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:31:30,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:31:30,562 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c' 2025-11-23 00:31:30,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:31:30,567 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c' 2025-11-23 00:31:30,574 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:31:30,576 [ scc.git] DEBUG omero-marshal | 2 +- 2025-11-23 00:31:30,576 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-23 00:31:30,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:31:30,742 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85f98fb9395da4d0cfbf0011f668c063de3a2895' 2025-11-23 00:31:30,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:31:30,746 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 336 (Bump omero-py from `780876c` to `4a17129`) 85f98fb9395da4d0cfbf0011f668c063de3a2895' 2025-11-23 00:31:30,754 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:31:30,756 [ scc.git] DEBUG omero-py | 2 +- 2025-11-23 00:31:30,756 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-23 00:31:31,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:31:31,141 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-23 00:31:31,187 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c' 2025-11-23 00:31:31,206 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4a1712983d1f38d249c2b203f96a086cd4da37b8' 2025-11-23 00:31:31,207 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:31:31,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:31:31,209 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-23 00:31:31,238 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf3bc4b290> has no local changes 2025-11-23 00:31:31,238 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' - PR 336 dependabot[bot] 'Bump omero-py from `780876c` to `4a17129`' Generated by OMERO-python-superbuild-push#573 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/573/)' 2025-11-23 00:31:31,262 [ scc.git] DEBUG [detached HEAD 8f901a1] merge master -Dorg -Snone 2025-11-23 00:31:31,262 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-11-23 00:31:31,262 [ scc.merge] INFO Already up to date. 2025-11-23 00:31:31,262 [ scc.merge] INFO 2025-11-23 00:31:31,262 [ scc.merge] INFO Merged PRs: 2025-11-23 00:31:31,262 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' 2025-11-23 00:31:31,262 [ scc.merge] INFO - PR 336 dependabot[bot] 'Bump omero-py from `780876c` to `4a17129`' 2025-11-23 00:31:31,262 [ scc.merge] INFO 2025-11-23 00:31:31,262 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-11-23 00:31:31,262 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-11-23 00:31:33,077 [ scc.config] DEBUG Found github.token 2025-11-23 00:31:33,078 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-11-23 00:31:33,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:31:33,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:31:34,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-11-23 00:31:34,090 [ scc.gh] DEBUG 4310 remaining from 5000 (Reset at 00:11 2025-11-23 00:31:34,091 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-23 00:31:34,093 [ scc.git] DEBUG Check current status 2025-11-23 00:31:34,093 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-23 00:31:34,095 [ scc.git] DEBUG 8f901a1 merge master -Dorg -Snone 2025-11-23 00:31:34,095 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-23 00:31:34,133 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-11-23 00:31:34,136 [ scc.git] DEBUG a3dd99b825ad44c9beadc38a8ae8ba94a155f62c omero-marshal (v0.9.0-18-ga3dd99b) 2025-11-23 00:31:34,140 [ scc.git] DEBUG 4a1712983d1f38d249c2b203f96a086cd4da37b8 omero-py (v5.21.2-1-g4a171298) 2025-11-23 00:31:34,144 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-11-23 00:31:34,148 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-11-23 00:31:34,151 [ scc.config] DEBUG Found remote.origin.url 2025-11-23 00:31:34,151 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-11-23 00:31:34,152 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-11-23 00:31:34,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-11-23 00:31:35,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-23 00:31:35,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-23 00:31:36,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-23 00:31:36,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-23 00:31:36,461 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-23 00:31:36,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-11-23 00:31:36,506 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-23 00:31:36,508 [ scc.git] DEBUG Check current status 2025-11-23 00:31:36,508 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-23 00:31:36,510 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-11-23 00:31:36,510 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-23 00:31:36,547 [ scc.config] DEBUG Found remote.origin.url 2025-11-23 00:31:36,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-11-23 00:31:37,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-23 00:31:37,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-23 00:31:38,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-23 00:31:38,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-23 00:31:38,876 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-23 00:31:38,913 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-11-23 00:31:38,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-11-23 00:31:38,914 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-23 00:31:38,916 [ scc.git] DEBUG Check current status 2025-11-23 00:31:38,916 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-23 00:31:38,918 [ scc.git] DEBUG a3dd99b Merge pull request #87 from lubianat/master 2025-11-23 00:31:38,918 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-23 00:31:38,955 [ scc.config] DEBUG Found remote.origin.url 2025-11-23 00:31:39,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-11-23 00:31:39,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-23 00:31:40,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-23 00:31:40,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-23 00:31:41,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-23 00:31:41,152 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-23 00:31:41,189 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-11-23 00:31:41,190 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-11-23 00:31:41,190 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-23 00:31:41,192 [ scc.git] DEBUG Check current status 2025-11-23 00:31:41,192 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-23 00:31:41,194 [ scc.git] DEBUG 4a171298 Bump version: 5.21.2 → 5.21.3.dev0 2025-11-23 00:31:41,194 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-23 00:31:41,231 [ scc.config] DEBUG Found remote.origin.url 2025-11-23 00:31:41,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-11-23 00:31:42,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-23 00:31:42,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-23 00:31:42,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-23 00:31:43,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-23 00:31:43,402 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-23 00:31:43,439 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-11-23 00:31:43,439 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-11-23 00:31:43,439 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-23 00:31:43,441 [ scc.git] DEBUG Check current status 2025-11-23 00:31:43,441 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-23 00:31:43,443 [ scc.git] DEBUG 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-11-23 00:31:43,443 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-23 00:31:43,482 [ scc.config] DEBUG Found remote.origin.url 2025-11-23 00:31:43,482 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-11-23 00:31:43,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-11-23 00:31:44,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-23 00:31:44,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-23 00:31:45,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-23 00:31:45,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-23 00:31:45,673 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-23 00:31:45,711 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-11-23 00:31:45,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-11-23 00:31:45,712 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-23 00:31:45,714 [ scc.git] DEBUG Check current status 2025-11-23 00:31:45,714 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-23 00:31:45,716 [ scc.git] DEBUG 2a7c4d2e3 Bump version: 5.29.2 → 5.29.3.dev0 2025-11-23 00:31:45,716 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-23 00:31:45,754 [ scc.config] DEBUG Found remote.origin.url 2025-11-23 00:31:46,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-11-23 00:31:46,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-23 00:31:47,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-23 00:31:47,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-23 00:31:48,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-23 00:31:48,025 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-23 00:31:48,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-11-23 00:31:48,061 [ scc.git] DEBUG Resetting... 2025-11-23 00:31:48,061 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-11-23 00:31:48,065 [ scc.git] DEBUG HEAD is now at 8f901a1 merge master -Dorg -Snone 2025-11-23 00:31:48,065 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-11-23 00:31:48,113 [ scc.git] DEBUG Check current status 2025-11-23 00:31:48,113 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-23 00:31:48,115 [ scc.git] DEBUG 8f901a1 merge master -Dorg -Snone 2025-11-23 00:31:48,115 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-23 00:31:48,152 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-11-23 00:31:48,155 [ scc.git] DEBUG a3dd99b825ad44c9beadc38a8ae8ba94a155f62c omero-marshal (v0.9.0-18-ga3dd99b) 2025-11-23 00:31:48,158 [ scc.git] DEBUG 4a1712983d1f38d249c2b203f96a086cd4da37b8 omero-py (v5.21.2-1-g4a171298) 2025-11-23 00:31:48,162 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-11-23 00:31:48,166 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-11-23 00:31:48,167 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-11-23 00:31:48,167 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-11-23 00:31:48,167 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-11-23 00:31:48,167 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-11-23 00:31:48,167 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-11-23 00:31:48,167 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-11-23 00:31:48,167 [ scc.repo] DEBUG ## PRs found: 2025-11-23 00:31:48,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2025-11-23 00:31:48,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/336 HTTP/1.1" 200 None 2025-11-23 00:31:48,982 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-23 00:31:49,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/85f98fb9395da4d0cfbf0011f668c063de3a2895 HTTP/1.1" 200 None 2025-11-23 00:31:50,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/85f98fb9395da4d0cfbf0011f668c063de3a2895/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:31:50,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/85f98fb9395da4d0cfbf0011f668c063de3a2895 HTTP/1.1" 200 None 2025-11-23 00:31:51,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/85f98fb9395da4d0cfbf0011f668c063de3a2895?per_page=1 HTTP/1.1" 200 2 2025-11-23 00:31:51,241 [ scc.repo] DEBUG - PR 336 dependabot[bot] 'Bump omero-py from `780876c` to `4a17129`' 2025-11-23 00:31:51,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None 2025-11-23 00:31:51,736 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-23 00:31:52,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c HTTP/1.1" 200 None 2025-11-23 00:31:52,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:31:53,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c HTTP/1.1" 200 None 2025-11-23 00:31:53,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/e5077065e3781e634471b4828f120f18c16dad1c?per_page=1 HTTP/1.1" 200 2 2025-11-23 00:31:53,701 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' 2025-11-23 00:31:53,701 [ scc.repo] DEBUG ## Branches found: 2025-11-23 00:31:53,701 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:31:53,701 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:31:53,703 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-23 00:31:53,705 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-23 00:31:53,706 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-23 00:31:53,708 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-23 00:31:53,710 [ scc.git] DEBUG Already up to date. 2025-11-23 00:31:53,711 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head' 2025-11-23 00:31:53,982 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-11-23 00:31:53,982 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD 2025-11-23 00:31:53,988 [ scc.git] DEBUG Calling 'git fetch origin pull/336/head' 2025-11-23 00:31:54,245 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-11-23 00:31:54,246 [ scc.git] DEBUG * branch refs/pull/336/head -> FETCH_HEAD 2025-11-23 00:31:54,251 [ scc.git] DEBUG ## Unique users: [] 2025-11-23 00:31:54,251 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:31:54,251 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:31:54,253 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c' 2025-11-23 00:31:54,256 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:31:54,258 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c' 2025-11-23 00:31:54,260 [ scc.git] DEBUG Already up to date. 2025-11-23 00:31:54,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:31:54,410 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85f98fb9395da4d0cfbf0011f668c063de3a2895' 2025-11-23 00:31:54,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:31:54,414 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 336 (Bump omero-py from `780876c` to `4a17129`) 85f98fb9395da4d0cfbf0011f668c063de3a2895' 2025-11-23 00:31:54,417 [ scc.git] DEBUG Already up to date. 2025-11-23 00:31:54,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:31:54,802 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-23 00:31:54,839 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:31:54,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:31:54,841 [ scc.repo] DEBUG ## PRs found: 2025-11-23 00:31:55,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-11-23 00:31:55,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/26 HTTP/1.1" 200 None 2025-11-23 00:31:55,894 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-23 00:31:56,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a HTTP/1.1" 200 None 2025-11-23 00:31:56,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:31:57,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-23 00:31:58,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a HTTP/1.1" 200 None 2025-11-23 00:31:58,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/38aa63d7d4014725060e4ecaa159922370485c5a?per_page=1 HTTP/1.1" 200 2 2025-11-23 00:31:58,450 [ scc.repo] DEBUG - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-23 00:31:58,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-11-23 00:31:59,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-11-23 00:31:59,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-11-23 00:32:00,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:32:00,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-11-23 00:32:01,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-11-23 00:32:01,310 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-11-23 00:32:01,310 [ scc.repo] DEBUG ## Branches found: 2025-11-23 00:32:01,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-11-23 00:32:01,310 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:32:01,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:01,312 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-23 00:32:01,315 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-23 00:32:01,315 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-23 00:32:01,317 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-23 00:32:01,320 [ scc.git] DEBUG Already up to date. 2025-11-23 00:32:01,320 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-11-23 00:32:01,594 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-11-23 00:32:01,594 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-11-23 00:32:01,598 [ scc.git] DEBUG Calling 'git fetch origin pull/26/head' 2025-11-23 00:32:01,861 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-11-23 00:32:01,861 [ scc.git] DEBUG * branch refs/pull/26/head -> FETCH_HEAD 2025-11-23 00:32:01,865 [ scc.git] DEBUG ## Unique users: [] 2025-11-23 00:32:01,866 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:32:01,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:01,868 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-11-23 00:32:01,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:01,873 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-11-23 00:32:01,884 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-11-23 00:32:01,884 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-11-23 00:32:01,884 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-11-23 00:32:01,884 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-11-23 00:32:01,884 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-11-23 00:32:01,884 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-11-23 00:32:01,885 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-11-23 00:32:01,885 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-11-23 00:32:01,885 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-11-23 00:32:01,885 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:32:01,888 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-11-23 00:32:01,889 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-11-23 00:32:01,889 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-11-23 00:32:01,889 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-11-23 00:32:01,889 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-11-23 00:32:01,889 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-11-23 00:32:01,889 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-11-23 00:32:01,889 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-11-23 00:32:01,889 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-11-23 00:32:01,890 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-11-23 00:32:02,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:32:02,045 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38aa63d7d4014725060e4ecaa159922370485c5a' 2025-11-23 00:32:02,048 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:02,050 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 26 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38aa63d7d4014725060e4ecaa159922370485c5a' 2025-11-23 00:32:02,057 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:32:02,060 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-23 00:32:02,060 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-23 00:32:02,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:32:02,437 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-23 00:32:02,475 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:32:02,475 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:02,477 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-23 00:32:02,513 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-23 00:32:02,516 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f176945bcd0> has no local changes 2025-11-23 00:32:02,516 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-python-superbuild-push#573 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/573/)' 2025-11-23 00:32:02,521 [ scc.git] DEBUG [detached HEAD 8497319] merge master -Dorg -Ssuccess-only 2025-11-23 00:32:02,521 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-11-23 00:32:02,522 [ scc.repo] DEBUG ## PRs found: 2025-11-23 00:32:03,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-11-23 00:32:03,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/88 HTTP/1.1" 200 None 2025-11-23 00:32:04,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/88/comments HTTP/1.1" 200 None 2025-11-23 00:32:04,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/cb9e1476df8e5b37dd5959a787cca1e5204c4b15 HTTP/1.1" 200 None 2025-11-23 00:32:05,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/cb9e1476df8e5b37dd5959a787cca1e5204c4b15/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:32:05,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/cb9e1476df8e5b37dd5959a787cca1e5204c4b15/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-23 00:32:06,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/cb9e1476df8e5b37dd5959a787cca1e5204c4b15 HTTP/1.1" 200 None 2025-11-23 00:32:06,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/cb9e1476df8e5b37dd5959a787cca1e5204c4b15?per_page=1 HTTP/1.1" 200 2 2025-11-23 00:32:06,542 [ scc.repo] DEBUG - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages' 2025-11-23 00:32:07,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-11-23 00:32:07,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-11-23 00:32:08,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-11-23 00:32:08,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-11-23 00:32:08,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-11-23 00:32:09,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:32:09,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-11-23 00:32:10,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-11-23 00:32:10,428 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-11-23 00:32:10,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-11-23 00:32:11,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-11-23 00:32:11,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-11-23 00:32:12,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-11-23 00:32:12,281 [ scc.repo] DEBUG ## Branches found: 2025-11-23 00:32:12,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-11-23 00:32:12,281 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:32:12,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:12,284 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-23 00:32:12,286 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-23 00:32:12,286 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-23 00:32:12,288 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-23 00:32:12,291 [ scc.git] DEBUG Already up to date. 2025-11-23 00:32:12,291 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-11-23 00:32:12,563 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-11-23 00:32:12,563 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-11-23 00:32:12,567 [ scc.git] DEBUG Calling 'git fetch origin pull/88/head' 2025-11-23 00:32:12,823 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-11-23 00:32:12,823 [ scc.git] DEBUG * branch refs/pull/88/head -> FETCH_HEAD 2025-11-23 00:32:12,827 [ scc.git] DEBUG ## Unique users: [] 2025-11-23 00:32:12,827 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:32:12,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:12,830 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-11-23 00:32:12,833 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:12,835 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-11-23 00:32:12,843 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-11-23 00:32:12,844 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:32:12,847 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-11-23 00:32:12,847 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-11-23 00:32:12,847 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-11-23 00:32:12,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:32:12,998 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cb9e1476df8e5b37dd5959a787cca1e5204c4b15' 2025-11-23 00:32:13,002 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:13,004 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 88 (Fix format of requirement specifiers for Ice wheel packages) cb9e1476df8e5b37dd5959a787cca1e5204c4b15' 2025-11-23 00:32:13,011 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:32:13,014 [ scc.git] DEBUG requirements-dev.txt | 4 ---- 2025-11-23 00:32:13,014 [ scc.git] DEBUG 1 file changed, 4 deletions(-) 2025-11-23 00:32:13,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:32:13,393 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-23 00:32:13,431 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:32:13,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:13,433 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-23 00:32:13,469 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-23 00:32:13,473 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f17694beb90> has no local changes 2025-11-23 00:32:13,473 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages' Generated by OMERO-python-superbuild-push#573 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/573/)' 2025-11-23 00:32:13,478 [ scc.git] DEBUG [detached HEAD 3cfcf3d] merge master -Dorg -Ssuccess-only 2025-11-23 00:32:13,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-11-23 00:32:13,479 [ scc.repo] DEBUG ## PRs found: 2025-11-23 00:32:14,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-11-23 00:32:14,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/488 HTTP/1.1" 200 None 2025-11-23 00:32:15,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/903a485d4462c78cf02335fba5dfd623daec34f2 HTTP/1.1" 200 None 2025-11-23 00:32:15,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/903a485d4462c78cf02335fba5dfd623daec34f2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:32:16,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/903a485d4462c78cf02335fba5dfd623daec34f2/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-23 00:32:16,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/903a485d4462c78cf02335fba5dfd623daec34f2 HTTP/1.1" 200 None 2025-11-23 00:32:16,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/903a485d4462c78cf02335fba5dfd623daec34f2?per_page=1 HTTP/1.1" 200 None 2025-11-23 00:32:17,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/903a485d4462c78cf02335fba5dfd623daec34f2 HTTP/1.1" 200 None 2025-11-23 00:32:17,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/903a485d4462c78cf02335fba5dfd623daec34f2/status HTTP/1.1" 200 None 2025-11-23 00:32:17,886 [ scc.repo] DEBUG - PR 488 kkoz 'Cleanse Directories' 2025-11-23 00:32:18,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/487 HTTP/1.1" 200 None 2025-11-23 00:32:18,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/27cd40866a23601f56fdee83031e9d27dd777500 HTTP/1.1" 200 None 2025-11-23 00:32:19,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/27cd40866a23601f56fdee83031e9d27dd777500/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:32:19,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/27cd40866a23601f56fdee83031e9d27dd777500/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-23 00:32:20,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/27cd40866a23601f56fdee83031e9d27dd777500 HTTP/1.1" 200 None 2025-11-23 00:32:20,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/27cd40866a23601f56fdee83031e9d27dd777500?per_page=1 HTTP/1.1" 200 None 2025-11-23 00:32:21,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/27cd40866a23601f56fdee83031e9d27dd777500 HTTP/1.1" 200 None 2025-11-23 00:32:21,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/27cd40866a23601f56fdee83031e9d27dd777500/status HTTP/1.1" 200 None 2025-11-23 00:32:21,640 [ scc.repo] DEBUG - PR 487 sbesson 'omero import: set java.io.tmpdir to gettempdir()' 2025-11-23 00:32:22,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/483 HTTP/1.1" 200 None 2025-11-23 00:32:22,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/7948091c18efb9eba4fbd8957c0f1e96db8e5fd2 HTTP/1.1" 200 None 2025-11-23 00:32:23,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/7948091c18efb9eba4fbd8957c0f1e96db8e5fd2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:32:23,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/7948091c18efb9eba4fbd8957c0f1e96db8e5fd2/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-23 00:32:24,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/7948091c18efb9eba4fbd8957c0f1e96db8e5fd2 HTTP/1.1" 200 None 2025-11-23 00:32:24,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/7948091c18efb9eba4fbd8957c0f1e96db8e5fd2?per_page=1 HTTP/1.1" 200 None 2025-11-23 00:32:24,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/7948091c18efb9eba4fbd8957c0f1e96db8e5fd2 HTTP/1.1" 200 None 2025-11-23 00:32:25,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/7948091c18efb9eba4fbd8957c0f1e96db8e5fd2/status HTTP/1.1" 200 None 2025-11-23 00:32:25,381 [ scc.repo] DEBUG - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()' 2025-11-23 00:32:25,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None 2025-11-23 00:32:26,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None 2025-11-23 00:32:26,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2025-11-23 00:32:27,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-11-23 00:32:27,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None 2025-11-23 00:32:28,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-11-23 00:32:28,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-11-23 00:32:29,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-11-23 00:32:29,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:32:30,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-11-23 00:32:30,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 2 2025-11-23 00:32:30,685 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-11-23 00:32:31,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-11-23 00:32:31,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-11-23 00:32:32,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-11-23 00:32:32,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:32:33,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-23 00:32:33,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-11-23 00:32:34,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-11-23 00:32:34,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-11-23 00:32:35,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:32:35,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-11-23 00:32:35,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-11-23 00:32:35,952 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-11-23 00:32:36,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-11-23 00:32:36,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-11-23 00:32:37,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-11-23 00:32:37,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:32:38,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-11-23 00:32:38,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-11-23 00:32:38,810 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-11-23 00:32:39,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-11-23 00:32:39,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-11-23 00:32:40,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-11-23 00:32:40,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-11-23 00:32:41,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-11-23 00:32:41,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:32:42,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-11-23 00:32:42,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-11-23 00:32:42,548 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-11-23 00:32:42,549 [ scc.repo] DEBUG ## Branches found: 2025-11-23 00:32:42,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-11-23 00:32:42,549 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:32:42,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:42,551 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-23 00:32:42,554 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-23 00:32:42,554 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-23 00:32:42,556 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-23 00:32:42,559 [ scc.git] DEBUG Already up to date. 2025-11-23 00:32:42,559 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-11-23 00:32:42,834 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-11-23 00:32:42,835 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-11-23 00:32:42,838 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-11-23 00:32:43,101 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-11-23 00:32:43,101 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-11-23 00:32:43,105 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-11-23 00:32:43,370 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-11-23 00:32:43,370 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-11-23 00:32:43,374 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-11-23 00:32:43,634 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-11-23 00:32:43,634 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-11-23 00:32:43,638 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2025-11-23 00:32:43,896 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-11-23 00:32:43,896 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2025-11-23 00:32:43,900 [ scc.git] DEBUG Calling 'git fetch origin pull/487/head' 2025-11-23 00:32:44,185 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-11-23 00:32:44,185 [ scc.git] DEBUG * branch refs/pull/487/head -> FETCH_HEAD 2025-11-23 00:32:44,189 [ scc.git] DEBUG Calling 'git fetch origin pull/488/head' 2025-11-23 00:32:44,444 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-11-23 00:32:44,444 [ scc.git] DEBUG * branch refs/pull/488/head -> FETCH_HEAD 2025-11-23 00:32:44,448 [ scc.git] DEBUG ## Unique users: [] 2025-11-23 00:32:44,448 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:32:44,448 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:44,450 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-11-23 00:32:44,461 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:44,463 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-11-23 00:32:44,485 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-11-23 00:32:44,485 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-11-23 00:32:44,486 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:32:44,490 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-11-23 00:32:44,490 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-11-23 00:32:44,490 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-11-23 00:32:44,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:32:44,647 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-11-23 00:32:44,659 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:44,661 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-11-23 00:32:44,678 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:32:44,681 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-11-23 00:32:44,681 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-11-23 00:32:44,681 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-11-23 00:32:44,681 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-11-23 00:32:44,681 [ scc.git] DEBUG create mode 100644 connect.py 2025-11-23 00:32:45,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:32:45,039 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-11-23 00:32:45,050 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:45,052 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-11-23 00:32:45,072 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-11-23 00:32:45,073 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:32:45,076 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-11-23 00:32:45,077 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-11-23 00:32:45,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:32:45,438 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-11-23 00:32:45,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:45,451 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-11-23 00:32:45,482 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-11-23 00:32:45,482 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:32:45,489 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-11-23 00:32:45,489 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-11-23 00:32:45,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:32:45,834 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7948091c18efb9eba4fbd8957c0f1e96db8e5fd2' 2025-11-23 00:32:45,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:45,847 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()) 7948091c18efb9eba4fbd8957c0f1e96db8e5fd2' 2025-11-23 00:32:45,881 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-11-23 00:32:45,882 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:32:45,889 [ scc.git] DEBUG src/omero/gateway/__init__.py | 5 +++++ 2025-11-23 00:32:45,889 [ scc.git] DEBUG 1 file changed, 5 insertions(+) 2025-11-23 00:32:46,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:32:46,273 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...27cd40866a23601f56fdee83031e9d27dd777500' 2025-11-23 00:32:46,285 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:46,287 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 487 (omero import: set java.io.tmpdir to gettempdir()) 27cd40866a23601f56fdee83031e9d27dd777500' 2025-11-23 00:32:46,306 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:32:46,309 [ scc.git] DEBUG src/omero/plugins/import.py | 7 ++++++- 2025-11-23 00:32:46,309 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 1 deletion(-) 2025-11-23 00:32:46,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:32:46,662 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...903a485d4462c78cf02335fba5dfd623daec34f2' 2025-11-23 00:32:46,673 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:46,675 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 488 (Cleanse Directories) 903a485d4462c78cf02335fba5dfd623daec34f2' 2025-11-23 00:32:46,697 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-11-23 00:32:46,698 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:32:46,702 [ scc.git] DEBUG src/omero/plugins/admin.py | 6 +++++- 2025-11-23 00:32:46,702 [ scc.git] DEBUG src/omero/util/cleanse.py | 38 ++++++++++++++++++++++++++++++++------ 2025-11-23 00:32:46,702 [ scc.git] DEBUG 2 files changed, 37 insertions(+), 7 deletions(-) 2025-11-23 00:32:47,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:32:47,053 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-23 00:32:47,091 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:32:47,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:47,093 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-23 00:32:47,127 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-23 00:32:47,132 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f176956f710> has no local changes 2025-11-23 00:32:47,132 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()' - PR 487 sbesson 'omero import: set java.io.tmpdir to gettempdir()' - PR 488 kkoz 'Cleanse Directories' Generated by OMERO-python-superbuild-push#573 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/573/)' 2025-11-23 00:32:47,138 [ scc.git] DEBUG [detached HEAD d46712b2] merge master -Dorg -Ssuccess-only 2025-11-23 00:32:47,138 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-11-23 00:32:47,138 [ scc.git] INFO Overriding base-branch from master to develop 2025-11-23 00:32:47,138 [ scc.repo] DEBUG ## PRs found: 2025-11-23 00:32:47,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-11-23 00:32:48,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/230 HTTP/1.1" 200 None 2025-11-23 00:32:48,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/230/comments HTTP/1.1" 200 None 2025-11-23 00:32:49,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/229 HTTP/1.1" 200 None 2025-11-23 00:32:49,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/229/comments HTTP/1.1" 200 None 2025-11-23 00:32:50,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-11-23 00:32:50,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-11-23 00:32:50,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-11-23 00:32:51,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:32:51,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-11-23 00:32:52,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-11-23 00:32:52,382 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-11-23 00:32:52,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-11-23 00:32:53,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-11-23 00:32:53,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-11-23 00:32:54,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:32:54,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-11-23 00:32:55,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-11-23 00:32:55,209 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-11-23 00:32:55,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-11-23 00:32:56,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-11-23 00:32:56,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-11-23 00:32:57,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-11-23 00:32:57,104 [ scc.repo] DEBUG ## Branches found: 2025-11-23 00:32:57,105 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-11-23 00:32:57,105 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:32:57,105 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:57,107 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-11-23 00:32:57,109 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-23 00:32:57,109 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-11-23 00:32:57,112 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-11-23 00:32:57,115 [ scc.git] DEBUG Already up to date. 2025-11-23 00:32:57,115 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-11-23 00:32:57,388 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-11-23 00:32:57,388 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-11-23 00:32:57,391 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-11-23 00:32:57,646 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-11-23 00:32:57,646 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-11-23 00:32:57,651 [ scc.git] DEBUG ## Unique users: [] 2025-11-23 00:32:57,651 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:32:57,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:57,653 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-11-23 00:32:57,658 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:57,660 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-11-23 00:32:57,669 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-11-23 00:32:57,669 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-23 00:32:57,670 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-23 00:32:57,672 [ scc.git] DEBUG Calling 'git reset --hard 03b9116196e1a799dd18a666559613d912be01a5' 2025-11-23 00:32:57,675 [ scc.git] DEBUG HEAD is now at 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-11-23 00:32:57,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:32:57,838 [ scc.git] DEBUG Calling 'git merge-base 03b9116196e1a799dd18a666559613d912be01a5 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-11-23 00:32:57,843 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..03b9116196e1a799dd18a666559613d912be01a5' 2025-11-23 00:32:57,847 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#573](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/573/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/573/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-11-23 00:32:57,849 [ scc.config] DEBUG Found github.token 2025-11-23 00:32:57,849 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-11-23 00:32:57,849 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-11-23 00:32:57,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:57,855 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-11-23 00:32:57,863 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:32:57,866 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-11-23 00:32:57,866 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-11-23 00:32:58,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:32:58,236 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-23 00:32:58,275 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:32:58,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:32:58,277 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-23 00:32:58,312 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-23 00:32:58,315 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f176956f410> has no local changes 2025-11-23 00:32:58,315 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 230 Rdornier 'Import from csv fix' (user: Rdornier) - PR 229 Rdornier 'Adding support for custom user label' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#573 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/573/)' 2025-11-23 00:32:58,320 [ scc.git] DEBUG [detached HEAD d772129] merge master -Dorg -Ssuccess-only 2025-11-23 00:32:58,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-11-23 00:32:58,321 [ scc.repo] DEBUG ## PRs found: 2025-11-23 00:32:59,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-11-23 00:32:59,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/639 HTTP/1.1" 200 None 2025-11-23 00:33:00,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/639/comments HTTP/1.1" 200 None 2025-11-23 00:33:00,122 [ scc.repo] DEBUG # ... Include label: include 2025-11-23 00:33:00,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f40bb0e7a80c8295e24bb791391afa4d4ec61203 HTTP/1.1" 200 None 2025-11-23 00:33:01,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f40bb0e7a80c8295e24bb791391afa4d4ec61203/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:01,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f40bb0e7a80c8295e24bb791391afa4d4ec61203/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-23 00:33:02,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638 HTTP/1.1" 200 None 2025-11-23 00:33:02,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638/comments HTTP/1.1" 200 None 2025-11-23 00:33:03,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/637 HTTP/1.1" 200 None 2025-11-23 00:33:03,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/637/comments HTTP/1.1" 200 None 2025-11-23 00:33:04,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a0d996b3854b7c57d8765bf936148101c8c87433 HTTP/1.1" 200 None 2025-11-23 00:33:04,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a0d996b3854b7c57d8765bf936148101c8c87433/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:05,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a0d996b3854b7c57d8765bf936148101c8c87433/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-23 00:33:05,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a0d996b3854b7c57d8765bf936148101c8c87433 HTTP/1.1" 200 None 2025-11-23 00:33:05,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/a0d996b3854b7c57d8765bf936148101c8c87433?per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:06,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a0d996b3854b7c57d8765bf936148101c8c87433 HTTP/1.1" 200 None 2025-11-23 00:33:06,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a0d996b3854b7c57d8765bf936148101c8c87433/status HTTP/1.1" 200 None 2025-11-23 00:33:06,914 [ scc.repo] DEBUG - PR 637 knabar 'Upgrade to Django 5.2 ' 2025-11-23 00:33:07,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/629 HTTP/1.1" 200 None 2025-11-23 00:33:07,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/628 HTTP/1.1" 200 None 2025-11-23 00:33:08,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-11-23 00:33:08,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:09,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-23 00:33:09,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-11-23 00:33:10,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b8c7989c9900270d7cf27523f2649bbb903c7a60?per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:10,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-11-23 00:33:11,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/status HTTP/1.1" 200 None 2025-11-23 00:33:11,262 [ scc.repo] DEBUG - PR 628 jburel 'Add protocol required since Django4' 2025-11-23 00:33:11,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None 2025-11-23 00:33:12,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-11-23 00:33:12,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:13,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-23 00:33:13,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-11-23 00:33:14,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:14,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-11-23 00:33:15,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None 2025-11-23 00:33:15,025 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-11-23 00:33:15,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-11-23 00:33:15,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-11-23 00:33:16,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/189a10758bce63c40d0fe73d490cc489623a6ceb HTTP/1.1" 200 None 2025-11-23 00:33:16,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/189a10758bce63c40d0fe73d490cc489623a6ceb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:17,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/189a10758bce63c40d0fe73d490cc489623a6ceb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-23 00:33:17,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/189a10758bce63c40d0fe73d490cc489623a6ceb HTTP/1.1" 200 None 2025-11-23 00:33:18,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/189a10758bce63c40d0fe73d490cc489623a6ceb?per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:18,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/189a10758bce63c40d0fe73d490cc489623a6ceb HTTP/1.1" 200 None 2025-11-23 00:33:19,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/189a10758bce63c40d0fe73d490cc489623a6ceb/status HTTP/1.1" 200 None 2025-11-23 00:33:19,253 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-11-23 00:33:19,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-11-23 00:33:20,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-11-23 00:33:20,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-11-23 00:33:21,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:21,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-23 00:33:22,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-11-23 00:33:22,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:23,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-11-23 00:33:23,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-11-23 00:33:23,537 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-11-23 00:33:24,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-11-23 00:33:24,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-11-23 00:33:25,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-11-23 00:33:25,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:25,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-23 00:33:26,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-11-23 00:33:26,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:27,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-11-23 00:33:27,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-11-23 00:33:27,891 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-11-23 00:33:28,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-11-23 00:33:28,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-11-23 00:33:29,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:29,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-23 00:33:30,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-11-23 00:33:30,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:31,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-11-23 00:33:31,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-11-23 00:33:31,697 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-11-23 00:33:32,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-11-23 00:33:32,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-11-23 00:33:33,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-11-23 00:33:33,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:34,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-23 00:33:34,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-11-23 00:33:35,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:35,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-11-23 00:33:36,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-11-23 00:33:36,100 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-11-23 00:33:36,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-11-23 00:33:37,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-11-23 00:33:37,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-11-23 00:33:38,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:38,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-23 00:33:39,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-11-23 00:33:39,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:40,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-11-23 00:33:40,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-11-23 00:33:40,478 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-11-23 00:33:40,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-11-23 00:33:41,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-11-23 00:33:41,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-11-23 00:33:42,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-11-23 00:33:42,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-11-23 00:33:43,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:43,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-11-23 00:33:44,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-11-23 00:33:44,359 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-11-23 00:33:44,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-11-23 00:33:45,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-11-23 00:33:45,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-11-23 00:33:46,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:46,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-11-23 00:33:47,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-11-23 00:33:47,112 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-11-23 00:33:47,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-11-23 00:33:48,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-11-23 00:33:48,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-11-23 00:33:49,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-23 00:33:49,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-11-23 00:33:49,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06b0073db19eeccb9698860f75639084ad1b1200?per_page=1 HTTP/1.1" 200 2 2025-11-23 00:33:49,967 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler' 2025-11-23 00:33:49,968 [ scc.repo] DEBUG ## Branches found: 2025-11-23 00:33:49,968 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-11-23 00:33:49,968 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:33:49,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:33:49,971 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-23 00:33:49,973 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-23 00:33:49,973 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-23 00:33:49,976 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-23 00:33:49,979 [ scc.git] DEBUG Already up to date. 2025-11-23 00:33:49,979 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head' 2025-11-23 00:33:50,264 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-11-23 00:33:50,264 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD 2025-11-23 00:33:50,268 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-11-23 00:33:50,529 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-11-23 00:33:50,529 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-11-23 00:33:50,533 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-11-23 00:33:50,795 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-11-23 00:33:50,795 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-11-23 00:33:50,799 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-11-23 00:33:51,054 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-11-23 00:33:51,054 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-11-23 00:33:51,058 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-11-23 00:33:51,316 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-11-23 00:33:51,316 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-11-23 00:33:51,320 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-11-23 00:33:51,577 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-11-23 00:33:51,577 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-11-23 00:33:51,581 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-11-23 00:33:51,837 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-11-23 00:33:51,837 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-11-23 00:33:51,841 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-11-23 00:33:52,097 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-11-23 00:33:52,097 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-11-23 00:33:52,101 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-11-23 00:33:52,366 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-11-23 00:33:52,366 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-11-23 00:33:52,370 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head' 2025-11-23 00:33:52,635 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-11-23 00:33:52,635 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD 2025-11-23 00:33:52,639 [ scc.git] DEBUG Calling 'git fetch origin pull/628/head' 2025-11-23 00:33:52,901 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-11-23 00:33:52,901 [ scc.git] DEBUG * branch refs/pull/628/head -> FETCH_HEAD 2025-11-23 00:33:52,905 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head' 2025-11-23 00:33:53,165 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-11-23 00:33:53,165 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD 2025-11-23 00:33:53,169 [ scc.git] DEBUG ## Unique users: [] 2025-11-23 00:33:53,169 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:33:53,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:33:53,171 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06b0073db19eeccb9698860f75639084ad1b1200' 2025-11-23 00:33:53,178 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:33:53,180 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 06b0073db19eeccb9698860f75639084ad1b1200' 2025-11-23 00:33:53,196 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:33:53,200 [ scc.git] DEBUG omeroweb/templates/nginx-development.conf.template | 2 +- 2025-11-23 00:33:53,200 [ scc.git] DEBUG omeroweb/templates/nginx-location.conf.template | 3 ++- 2025-11-23 00:33:53,200 [ scc.git] DEBUG omeroweb/templates/nginx.conf.template | 2 +- 2025-11-23 00:33:53,200 [ scc.git] DEBUG test/unit/reference_templates/nginx-development-withoptions.conf | 2 +- 2025-11-23 00:33:53,200 [ scc.git] DEBUG test/unit/reference_templates/nginx-development.conf | 2 +- 2025-11-23 00:33:53,200 [ scc.git] DEBUG test/unit/reference_templates/nginx-location-withoptions.conf | 3 ++- 2025-11-23 00:33:53,200 [ scc.git] DEBUG test/unit/reference_templates/nginx-location.conf | 3 ++- 2025-11-23 00:33:53,200 [ scc.git] DEBUG test/unit/reference_templates/nginx-withoptions.conf | 2 +- 2025-11-23 00:33:53,200 [ scc.git] DEBUG test/unit/reference_templates/nginx.conf | 2 +- 2025-11-23 00:33:53,201 [ scc.git] DEBUG test/unit/test_web.py | 1 + 2025-11-23 00:33:53,201 [ scc.git] DEBUG 10 files changed, 13 insertions(+), 9 deletions(-) 2025-11-23 00:33:53,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:33:53,359 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-11-23 00:33:53,366 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:33:53,368 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-11-23 00:33:53,385 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-11-23 00:33:53,385 [ scc.git] DEBUG Auto-merging setup.py 2025-11-23 00:33:53,386 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:33:53,389 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-11-23 00:33:53,389 [ scc.git] DEBUG setup.py | 1 + 2025-11-23 00:33:53,389 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-11-23 00:33:53,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:33:53,754 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-11-23 00:33:53,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:33:53,763 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-11-23 00:33:53,783 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-11-23 00:33:53,783 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-11-23 00:33:53,784 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:33:53,788 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-11-23 00:33:53,788 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-11-23 00:33:53,788 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-11-23 00:33:54,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:33:54,153 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-11-23 00:33:54,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:33:54,162 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-11-23 00:33:54,179 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:33:54,182 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-11-23 00:33:54,182 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-23 00:33:54,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:33:54,563 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-11-23 00:33:54,569 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:33:54,571 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-11-23 00:33:54,588 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:33:54,591 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-11-23 00:33:54,591 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-11-23 00:33:54,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:33:54,971 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-11-23 00:33:54,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:33:54,980 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-11-23 00:33:54,997 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:33:55,002 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-11-23 00:33:55,002 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-11-23 00:33:55,002 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-11-23 00:33:55,002 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-11-23 00:33:55,002 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-11-23 00:33:55,002 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-11-23 00:33:55,002 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-11-23 00:33:55,002 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-11-23 00:33:55,002 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-11-23 00:33:55,002 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-11-23 00:33:55,002 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-11-23 00:33:55,002 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-11-23 00:33:55,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:33:55,370 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-11-23 00:33:55,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:33:55,379 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-11-23 00:33:55,403 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-11-23 00:33:55,404 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:33:55,410 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-11-23 00:33:55,410 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-11-23 00:33:55,410 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-11-23 00:33:55,410 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-11-23 00:33:55,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:33:55,770 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-11-23 00:33:55,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:33:55,779 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-11-23 00:33:55,797 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:33:55,800 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-11-23 00:33:55,800 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-11-23 00:33:55,800 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-11-23 00:33:56,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:33:56,189 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...189a10758bce63c40d0fe73d490cc489623a6ceb' 2025-11-23 00:33:56,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:33:56,198 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) 189a10758bce63c40d0fe73d490cc489623a6ceb' 2025-11-23 00:33:56,217 [ scc.git] DEBUG Auto-merging omeroweb/webclient/static/webclient/css/dusty.css 2025-11-23 00:33:56,218 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:33:56,222 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 2 +- 2025-11-23 00:33:56,222 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 43 +++++++++++++++++++++- 2025-11-23 00:33:56,222 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 +++++++++++----- 2025-11-23 00:33:56,222 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 + 2025-11-23 00:33:56,222 [ scc.git] DEBUG 4 files changed, 66 insertions(+), 12 deletions(-) 2025-11-23 00:33:56,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:33:56,602 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-11-23 00:33:56,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:33:56,611 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-11-23 00:33:56,629 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-11-23 00:33:56,630 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:33:56,634 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++----- 2025-11-23 00:33:56,634 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-) 2025-11-23 00:33:56,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:33:56,994 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-11-23 00:33:57,002 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:33:57,004 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 628 (Add protocol required since Django4) b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-11-23 00:33:57,022 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-11-23 00:33:57,023 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:33:57,026 [ scc.git] DEBUG omeroweb/settings.py | 4 ++-- 2025-11-23 00:33:57,026 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2025-11-23 00:33:57,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:33:57,392 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a0d996b3854b7c57d8765bf936148101c8c87433' 2025-11-23 00:33:57,400 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:33:57,402 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Upgrade to Django 5.2 ) a0d996b3854b7c57d8765bf936148101c8c87433' 2025-11-23 00:33:57,428 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-11-23 00:33:57,428 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-11-23 00:33:57,428 [ scc.git] DEBUG Auto-merging setup.py 2025-11-23 00:33:57,429 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-23 00:33:57,435 [ scc.git] DEBUG .github/workflows/install.yml | 4 ++-- 2025-11-23 00:33:57,436 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-23 00:33:57,436 [ scc.git] DEBUG .github/workflows/tox.yml | 1 - 2025-11-23 00:33:57,436 [ scc.git] DEBUG omero/plugins/web.py | 11 +---------- 2025-11-23 00:33:57,436 [ scc.git] DEBUG omeroweb/settings.py | 2 +- 2025-11-23 00:33:57,436 [ scc.git] DEBUG omeroweb/webadmin/views.py | 2 +- 2025-11-23 00:33:57,436 [ scc.git] DEBUG omeroweb/webclient/views.py | 18 +++++++++--------- 2025-11-23 00:33:57,436 [ scc.git] DEBUG setup.py | 4 ++-- 2025-11-23 00:33:57,436 [ scc.git] DEBUG tox.ini | 3 +-- 2025-11-23 00:33:57,436 [ scc.git] DEBUG 9 files changed, 18 insertions(+), 29 deletions(-) 2025-11-23 00:33:57,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:33:57,795 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-23 00:33:57,832 [ scc.git] DEBUG Get sha1 of %s 2025-11-23 00:33:57,832 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-23 00:33:57,834 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-23 00:33:57,870 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-23 00:33:57,877 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f176957cb10> has no local changes 2025-11-23 00:33:57,878 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 639 Rdornier 'Split view user label' (status: action_required) - PR 638 will-moore 'Workaround for user not in group' (stage: draft) - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' - PR 637 knabar 'Upgrade to Django 5.2 ' Generated by OMERO-python-superbuild-push#573 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/573/)' 2025-11-23 00:33:57,887 [ scc.git] DEBUG [detached HEAD 918874a47] merge master -Dorg -Ssuccess-only 2025-11-23 00:33:57,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-11-23 00:33:57,888 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-23 00:33:57,930 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-11-23 00:33:58,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:33:58,202 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-11-23 00:33:58,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:33:58,605 [ scc.config] DEBUG Found submodule.omero-py.url 2025-11-23 00:33:59,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:33:59,016 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-11-23 00:33:59,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:33:59,421 [ scc.config] DEBUG Found submodule.omero-web.url 2025-11-23 00:33:59,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-23 00:33:59,811 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-23 00:33:59,835 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f176a2ddf10> has local changes 2025-11-23 00:33:59,835 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' - PR 336 dependabot[bot] 'Bump omero-py from `780876c` to `4a17129`' Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages' Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()' - PR 487 sbesson 'omero import: set java.io.tmpdir to gettempdir()' - PR 488 kkoz 'Cleanse Directories' Repository: ome/omero-scripts Excluded PRs: - PR 230 Rdornier 'Import from csv fix' (user: Rdornier) - PR 229 Rdornier 'Adding support for custom user label' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 639 Rdornier 'Split view user label' (status: action_required) - PR 638 will-moore 'Workaround for user not in group' (stage: draft) - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' - PR 637 knabar 'Upgrade to Django 5.2 ' Generated by OMERO-python-superbuild-push#573 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/573/)' 2025-11-23 00:33:59,842 [ scc.git] DEBUG [detached HEAD c48d9c2] merge master -Dorg -Ssuccess-only 2025-11-23 00:33:59,842 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-11-23 00:33:59,842 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-11-23 00:33:59,842 [ scc.merge] INFO Already up to date. 2025-11-23 00:33:59,842 [ scc.merge] INFO 2025-11-23 00:33:59,842 [ scc.merge] INFO Merged PRs: 2025-11-23 00:33:59,842 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' 2025-11-23 00:33:59,842 [ scc.merge] INFO - PR 336 dependabot[bot] 'Bump omero-py from `780876c` to `4a17129`' 2025-11-23 00:33:59,842 [ scc.merge] INFO 2025-11-23 00:33:59,842 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-11-23 00:33:59,842 [ scc.merge] INFO Already up to date. 2025-11-23 00:33:59,842 [ scc.merge] INFO 2025-11-23 00:33:59,843 [ scc.merge] INFO Merged PRs: 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-23 00:33:59,843 [ scc.merge] INFO 2025-11-23 00:33:59,843 [ scc.merge] INFO Repository: ome/omero-marshal 2025-11-23 00:33:59,843 [ scc.merge] INFO Excluded PRs: 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-11-23 00:33:59,843 [ scc.merge] INFO Already up to date. 2025-11-23 00:33:59,843 [ scc.merge] INFO 2025-11-23 00:33:59,843 [ scc.merge] INFO Merged PRs: 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages' 2025-11-23 00:33:59,843 [ scc.merge] INFO 2025-11-23 00:33:59,843 [ scc.merge] INFO Repository: ome/omero-py 2025-11-23 00:33:59,843 [ scc.merge] INFO Excluded PRs: 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric) 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-11-23 00:33:59,843 [ scc.merge] INFO Already up to date. 2025-11-23 00:33:59,843 [ scc.merge] INFO 2025-11-23 00:33:59,843 [ scc.merge] INFO Merged PRs: 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()' 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 487 sbesson 'omero import: set java.io.tmpdir to gettempdir()' 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 488 kkoz 'Cleanse Directories' 2025-11-23 00:33:59,843 [ scc.merge] INFO 2025-11-23 00:33:59,843 [ scc.merge] INFO Repository: ome/omero-scripts 2025-11-23 00:33:59,843 [ scc.merge] INFO Excluded PRs: 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' (user: Rdornier) 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' (user: Rdornier) 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-11-23 00:33:59,843 [ scc.merge] INFO Already up to date. 2025-11-23 00:33:59,843 [ scc.merge] INFO 2025-11-23 00:33:59,843 [ scc.merge] INFO Merged PRs: 2025-11-23 00:33:59,843 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-11-23 00:33:59,843 [ scc.merge] INFO 2025-11-23 00:33:59,843 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-23 00:33:59,844 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-11-23 00:33:59,844 [ scc.merge] INFO 2025-11-23 00:33:59,844 [ scc.merge] INFO Repository: ome/omero-web 2025-11-23 00:33:59,844 [ scc.merge] INFO Excluded PRs: 2025-11-23 00:33:59,844 [ scc.merge] INFO - PR 639 Rdornier 'Split view user label' (status: action_required) 2025-11-23 00:33:59,844 [ scc.merge] INFO - PR 638 will-moore 'Workaround for user not in group' (stage: draft) 2025-11-23 00:33:59,844 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-11-23 00:33:59,844 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-11-23 00:33:59,844 [ scc.merge] INFO Already up to date. 2025-11-23 00:33:59,844 [ scc.merge] INFO 2025-11-23 00:33:59,844 [ scc.merge] INFO Merged PRs: 2025-11-23 00:33:59,844 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' 2025-11-23 00:33:59,844 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-11-23 00:33:59,844 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-11-23 00:33:59,844 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-11-23 00:33:59,844 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-11-23 00:33:59,844 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-11-23 00:33:59,844 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-11-23 00:33:59,844 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-11-23 00:33:59,844 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-11-23 00:33:59,844 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-11-23 00:33:59,844 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4' 2025-11-23 00:33:59,844 [ scc.merge] INFO - PR 637 knabar 'Upgrade to Django 5.2 ' 2025-11-23 00:33:59,844 [ scc.merge] INFO 2025-11-23 00:33:59,844 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-11-23 00:33:59,844 [ scc.git] DEBUG Calling 'git remote' 2025-11-23 00:33:59,846 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-11-23 00:33:59,846 [ scc.git] DEBUG Calling 'git remote' 2025-11-23 00:33:59,848 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-11-23 00:33:59,848 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-11-23 00:33:59,848 [ scc.git] DEBUG Calling 'git remote' 2025-11-23 00:33:59,850 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-11-23 00:33:59,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-11-23 00:33:59,851 [ scc.git] DEBUG Calling 'git remote' 2025-11-23 00:33:59,852 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-11-23 00:33:59,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-11-23 00:33:59,853 [ scc.git] DEBUG Calling 'git remote' 2025-11-23 00:33:59,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-11-23 00:33:59,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-11-23 00:33:59,855 [ scc.git] DEBUG Calling 'git remote' 2025-11-23 00:33:59,856 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from a3dd99b nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 4a171298 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 03b9116 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 2a7c4d2e3 nothing to commit, working tree clean HEAD detached from b68c3cf nothing to commit, working tree clean 2025-11-23 00:34:28,263 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS