00:57:57 Started by upstream project "Trigger" build number 412
00:57:57 originally caused by:
00:57:57 Started by timer
00:57:57 Running as SYSTEM
00:57:58 Building remotely on omero (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-server
00:57:58 [OMERO-server] $ /bin/bash -xe /tmp/jenkins7863935371115958157.sh
00:57:58 + source /home/settings.env
00:57:58 ++ OMERO_DB_HOST=pg
00:57:58 ++ OMERO_DB_USER=postgres
00:57:58 ++ OMERO_DB_PASS=
00:57:58 ++ OMERO_ROOT_PASS=omero
00:57:58 ++ OMERO_DATA_DIR=/OMERO
00:57:58 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
00:57:58 + OMERO_DB_NAME=OMERO-server
00:57:58 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
00:57:58 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:57:58 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:57:58 + OMERO_DATA_DIR=/home/omero/omero-server-data
00:57:58 + '[' -e /home/omero/workspace/OMERO-server/OMERO.server ']'
00:57:58 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate
00:57:58 ++ deactivate nondestructive
00:57:58 ++ '[' -n '' ']'
00:57:58 ++ '[' -n '' ']'
00:57:58 ++ '[' -n /bin/bash -o -n '' ']'
00:57:58 ++ hash -r
00:57:58 ++ '[' -n '' ']'
00:57:58 ++ unset VIRTUAL_ENV
00:57:58 ++ '[' '!' nondestructive = nondestructive ']'
00:57:58 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
00:57:58 ++ export VIRTUAL_ENV
00:57:58 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:57:58 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:57:58 ++ export PATH
00:57:58 ++ '[' -n '' ']'
00:57:58 ++ '[' -z '' ']'
00:57:58 ++ _OLD_VIRTUAL_PS1=
00:57:58 ++ PS1='(.venv3) '
00:57:58 ++ export PS1
00:57:58 ++ '[' -n /bin/bash -o -n '' ']'
00:57:58 ++ hash -r
00:57:58 + omero admin stop
00:58:16 Waiting on shutdown. Use CTRL-C to exit
00:58:16 .+ sleep 5
00:58:31 + deactivate
00:58:31 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
00:58:31 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:58:31 + export PATH
00:58:31 + unset _OLD_VIRTUAL_PATH
00:58:31 + '[' -n '' ']'
00:58:31 + '[' -n /bin/bash -o -n '' ']'
00:58:31 + hash -r
00:58:31 + '[' -n '' ']'
00:58:31 + unset VIRTUAL_ENV
00:58:31 + '[' '!' '' = nondestructive ']'
00:58:31 + unset -f deactivate
00:58:31 + rm -rf /home/omero/workspace/OMERO-server/.venv3
00:58:32 + python3 -m venv /home/omero/workspace/OMERO-server/.venv3
00:58:38 + '[' false = true ']'
00:58:38 + echo 'Skipping PURGE_DATA:CleanDbAndRepo'
00:58:38 Skipping PURGE_DATA:CleanDbAndRepo
00:58:38 + rm -rf /home/omero/workspace/OMERO-server/omero-blitz-5.8.2-SNAPSHOT-python.zip /home/omero/workspace/OMERO-server/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_marshal-0.9.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_py-5.19.7.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_scripts-5.9.1.dev0.tar.gz /home/omero/workspace/OMERO-server/OMERO.server /home/omero/workspace/OMERO-server/omero_web-5.29.1.dev0.tar.gz /home/omero/workspace/OMERO-server/version.properties
00:59:02 Copied 1 artifact from "OMERO-build" build number 352
00:59:02 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 348
00:59:02 Copied 2 artifacts from "OMERO-build-build" build number 375
00:59:02 [OMERO-server] $ /bin/bash -xe /tmp/jenkins13668400565206968946.sh
00:59:02 + source /home/settings.env
00:59:02 ++ OMERO_DB_HOST=pg
00:59:02 ++ OMERO_DB_USER=postgres
00:59:02 ++ OMERO_DB_PASS=
00:59:02 ++ OMERO_ROOT_PASS=omero
00:59:02 ++ OMERO_DATA_DIR=/OMERO
00:59:02 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
00:59:02 + OMERO_DB_NAME=OMERO-server
00:59:02 + OMERO_DATA_DIR=/home/omero/omero-server-data
00:59:02 + mkdir -p /home/omero/omero-server-data
00:59:02 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
00:59:02 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:59:02 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:59:02 + export ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
00:59:02 + ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
00:59:02 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
00:59:02 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
00:59:02 ++ ls OMERO.server-5.6.3-548-bf8a6734d5-ice36.zip
00:59:02 + ZIP=OMERO.server-5.6.3-548-bf8a6734d5-ice36.zip
00:59:02 + '[' '!' -z '' ']'
00:59:02 + DIST=OMERO.server-5.6.3-548-bf8a6734d5-ice36
00:59:02 + unzip OMERO.server-5.6.3-548-bf8a6734d5-ice36.zip
00:59:02 Archive: OMERO.server-5.6.3-548-bf8a6734d5-ice36.zip
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/blitz/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/grid/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/profiles/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/templates/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/templates/error/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/templates/grid/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/janelia/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/matplotlib/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/ncsa_paledit/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/seaborn/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/wcif/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/analysis_scripts/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/annotation_scripts/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/export_scripts/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/figure_scripts/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/import_scripts/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/util_scripts/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/misc/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__1/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__10/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__11/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__2/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__3/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__4/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__5/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__6/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__7/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__8/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__9/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3__4/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3__5/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3__6/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3__7/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO4.1__0/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO4.2__0/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO4.2__0/t/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO4.3__0/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO4.4__0/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO4__0/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.0__0/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.1__1/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.2__0/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.3__0/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.4DEV__1/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.4DEV__2/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.4DEV__3/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.4__0/
00:59:02 creating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/var/
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/LICENSE.txt
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/backup.cfg
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/blitz/mail-senders.example
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/blitz/mail-server.example
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/build.properties
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/env.bat
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/env.sh
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/hibernate.properties
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/ice.config
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/logback-cli.xml
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/logback-indexing-cli.xml
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/logback-indexing.xml
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/logback.xml
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/mime.types
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/node1.cfg
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/node2.cfg
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/omero.properties
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/profiles/psql
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/rollover.cfg
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/templates/Windows.cfg
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/templates/error/maintainance.html
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/templates/grid/README
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/templates/grid/default.xml
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/templates/grid/templates.xml
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/templates/grid/windefault.xml
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/templates/ice.config
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/templates/internal.cfg
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/templates/master.cfg
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/templates/robot.template
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/etc/testdropbox.config
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/history.rst
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/OMEZarrReader.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/activation.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/aggdesigner-algorithm.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/aircompressor.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/annotations.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/antlr.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/aopalliance.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/avatica-core.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/avatica-metrics.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/aws-java-sdk-core.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/aws-java-sdk-kms.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/aws-java-sdk-s3.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/base.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-all.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-anim.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-awt-util.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-bridge.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-codec.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-constants.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-css.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-dom.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-ext.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-extension.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-gui-util.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-gvt.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-i18n.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-parser.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-rasterizer-ext.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-rasterizer.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-script.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-slideshow.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-squiggle-ext.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-squiggle.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-svg-dom.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-svgbrowser.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-svggen.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-svgpp.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-svgrasterizer.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-swing.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-transcoder.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-ttf2svg.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-util.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/batik-xml.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/btm.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/bufr.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/c3p0.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/calcite-core.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/calcite-linq4j.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/cdm-core.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/checker-qual.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/commons-beanutils.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/commons-codec.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/commons-collections.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/commons-collections4.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/commons-compiler.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/commons-dbcp2.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/commons-io.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/commons-lang.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/commons-lang3.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/commons-logging.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/commons-math.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/commons-pool2.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/dom4j.jar
00:59:02 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/ehcache.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/error_prone_annotations.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/esri-geometry-api.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/failureaccess.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/filters.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/fontbox.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/formats-api.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/formats-bsd.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/formats-gpl.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/glacier2.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/google-http-client-xml.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/google-http-client.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/guava.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/hamcrest-core.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/hazelcast-all.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/hibernate-commons-annotations.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/hibernate-core.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/hibernate-jpa-2.0-api.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/hibernate-search-analyzers.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/hibernate-search.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/httpclient.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/httpcore.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/httpmime.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/httpservices.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/ice.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/icegrid.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/icestorm.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/ini4j.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/j2objc-annotations.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/jackson-annotations.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/jackson-core.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/jackson-databind.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/jackson-dataformat-cbor.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/jackson-dataformat-yaml.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/jamon.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/janino.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/java-getopt.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/java-image-scaling.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/javassist.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/javax.activation.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/javax.mail.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/jblosc.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/jcip-annotations.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/jgoodies-common.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/jgoodies-forms.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/jhdf5.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/jmespath-java.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/jna.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/joda-time.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/json-path.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/json.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/jta.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/junit.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/jxrlib-all.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/jython.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/jzarr.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/kryo.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/listenablefuture.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/logback-classic.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/logback-core.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/lucene-analyzers.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/lucene-core.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/lucene-highlighter.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/lucene-memory.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/lucene-misc.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/lucene-smartcn.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/lucene-spatial.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/lucene-spellchecker.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/lucene-stempel.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/memory.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/metadata-extractor.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/metakit.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/metrics-core.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/metrics-graphite.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/metrics-jvm.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/metrics-logback.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/minio.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/minlog.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/native-lib-loader.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/objenesis.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/okhttp.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/okio.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/ome-codecs.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/ome-common.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/ome-jai.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/ome-mdbtools.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/ome-poi.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/ome-xml.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/omero-blitz.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/omero-common.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/omero-gateway.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/omero-model.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/omero-renderer.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/omero-romio.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/omero-server.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/pdfbox.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/perf4j.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/postgresql.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/protobuf-java.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/quartz.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/re2j.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/reflectasm.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/rhino.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/serializer.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/sketches-core.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/slf4j-api.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/snakeyaml.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/solr-analysis-extras.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/solr-commons-csv.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/solr-core.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/solr-solrj.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/specification.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/spring-aop.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/spring-beans.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/spring-context-support.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/spring-context.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/spring-core.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/spring-expression.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/spring-jdbc.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/spring-jms.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/spring-ldap-core.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/spring-messaging.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/spring-orm.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/spring-security-core.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/spring-security-ldap.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/spring-tx.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/sqlite-jdbc.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/subethasmtp.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/turbojpeg.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/udunits.jar
00:59:03 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/xalan.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/xercesImpl.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/xml-apis-ext.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/xml-apis.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/xmlgraphics-commons.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/xmpcore.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/client/xpp3.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/README.rst
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/3-3-2_rgb.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/cividis.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/fire.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/glasbey.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/glasbey_inverted.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/glow.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/grays.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/ice.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/janelia/pup_br.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/janelia/pup_nr.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/matplotlib/inferno.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/matplotlib/magma.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/matplotlib/plasma.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/matplotlib/viridis.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/ncsa_paledit/16_colors.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/ncsa_paledit/5_ramps.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/ncsa_paledit/6_shades.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/ncsa_paledit/blue_orange_icb.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/ncsa_paledit/brgbcmyw.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/ncsa_paledit/cool.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/ncsa_paledit/edges.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/ncsa_paledit/gem.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/ncsa_paledit/phase.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/ncsa_paledit/royal.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/ncsa_paledit/sepia.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/ncsa_paledit/smart.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/ncsa_paledit/thal.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/ncsa_paledit/thallium.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/ncsa_paledit/unionjack.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/physics.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/red-green.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/seaborn/mako.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/seaborn/rocket.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/spectrum.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/thermal.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/turbo.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/wcif/cyan_hot.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/wcif/green_fire_blue.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/wcif/hilo.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/wcif/ica.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/wcif/ica2.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/wcif/ica3.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/wcif/magenta_hot.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/wcif/orange_hot.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/wcif/rainbow_rgb.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/wcif/red_hot.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/luts/wcif/yellow_hot.lut
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/analysis_scripts/Kymograph.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/analysis_scripts/Kymograph_Analysis.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/analysis_scripts/Plot_Profile.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/analysis_scripts/__init__.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/annotation_scripts/Convert_KeyVal_namespace.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/annotation_scripts/Export_to_csv.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/annotation_scripts/Import_from_csv.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/annotation_scripts/Remove_KeyVal.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/annotation_scripts/__init__.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/export_scripts/Batch_Image_Export.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/export_scripts/Batch_ROI_Export.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/export_scripts/Make_Movie.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/export_scripts/__init__.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/figure_scripts/Movie_Figure.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/figure_scripts/Movie_ROI_Figure.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/figure_scripts/ROI_Split_Figure.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/figure_scripts/Split_View_Figure.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/figure_scripts/Thumbnail_Figure.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/figure_scripts/__init__.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/import_scripts/Populate_Metadata.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/import_scripts/Populate_ROI.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/import_scripts/__init__.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/util_scripts/Channel_Offsets.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/util_scripts/Combine_Images.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/util_scripts/Dataset_To_Plate.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/util_scripts/Images_From_ROIs.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/util_scripts/Move_Annotations.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/scripts/omero/util_scripts/__init__.py
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/OMEZarrReader.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/activation.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/aggdesigner-algorithm.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/aircompressor.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/annotations.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/antlr.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/aopalliance.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/avatica-core.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/avatica-metrics.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/aws-java-sdk-core.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/aws-java-sdk-kms.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/aws-java-sdk-s3.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/base.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-all.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-anim.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-awt-util.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-bridge.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-codec.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-constants.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-css.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-dom.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-ext.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-extension.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-gui-util.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-gvt.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-i18n.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-parser.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-rasterizer-ext.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-rasterizer.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-script.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-slideshow.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-squiggle-ext.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-squiggle.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-svg-dom.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-svgbrowser.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-svggen.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-svgpp.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-svgrasterizer.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-swing.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-transcoder.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-ttf2svg.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-util.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/batik-xml.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/btm.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/bufr.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/c3p0.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/calcite-core.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/calcite-linq4j.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/cdm-core.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/checker-qual.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/commons-beanutils.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/commons-codec.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/commons-collections.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/commons-collections4.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/commons-compiler.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/commons-dbcp2.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/commons-io.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/commons-lang.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/commons-lang3.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/commons-logging.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/commons-math.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/commons-pool2.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/dom4j.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/ehcache.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/error_prone_annotations.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/esri-geometry-api.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/failureaccess.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/filters.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/fontbox.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/formats-api.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/formats-bsd.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/formats-gpl.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/glacier2.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/google-http-client-xml.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/google-http-client.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/guava.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/hamcrest-core.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/hazelcast-all.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/hibernate-commons-annotations.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/hibernate-core.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/hibernate-jpa-2.0-api.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/hibernate-search-analyzers.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/hibernate-search.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/httpclient.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/httpcore.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/httpmime.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/httpservices.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/ice.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/icegrid.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/icestorm.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/ini4j.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/j2objc-annotations.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/jackson-annotations.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/jackson-core.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/jackson-databind.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/jackson-dataformat-cbor.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/jackson-dataformat-yaml.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/jamon.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/janino.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/java-getopt.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/java-image-scaling.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/javassist.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/javax.activation.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/javax.mail.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/jblosc.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/jcip-annotations.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/jgoodies-common.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/jgoodies-forms.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/jhdf5.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/jmespath-java.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/jna.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/joda-time.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/json-path.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/json.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/jta.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/junit.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/jxrlib-all.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/jython.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/jzarr.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/kryo.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/listenablefuture.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/logback-classic.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/logback-core.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/lucene-analyzers.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/lucene-core.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/lucene-highlighter.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/lucene-memory.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/lucene-misc.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/lucene-smartcn.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/lucene-spatial.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/lucene-spellchecker.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/lucene-stempel.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/memory.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/metadata-extractor.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/metakit.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/metrics-core.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/metrics-graphite.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/metrics-jvm.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/metrics-logback.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/minio.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/minlog.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/native-lib-loader.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/objenesis.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/okhttp.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/okio.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/ome-codecs.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/ome-common.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/ome-jai.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/ome-mdbtools.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/ome-poi.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/ome-xml.jar
00:59:04 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/omero-blitz.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/omero-common.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/omero-gateway.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/omero-model.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/omero-renderer.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/omero-romio.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/omero-server.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/pdfbox.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/perf4j.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/postgresql.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/protobuf-java.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/quartz.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/re2j.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/reflectasm.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/rhino.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/serializer.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/sketches-core.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/slf4j-api.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/snakeyaml.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/solr-analysis-extras.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/solr-commons-csv.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/solr-core.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/solr-solrj.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/specification.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/spring-aop.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/spring-beans.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/spring-context-support.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/spring-context.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/spring-core.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/spring-expression.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/spring-jdbc.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/spring-jms.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/spring-ldap-core.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/spring-messaging.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/spring-orm.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/spring-security-core.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/spring-security-ldap.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/spring-tx.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/sqlite-jdbc.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/subethasmtp.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/turbojpeg.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/udunits.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/xalan.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/xercesImpl.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/xml-apis-ext.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/xml-apis.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/xmlgraphics-commons.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/xmpcore.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/lib/server/xpp3.jar
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/README
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/agpl.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/antlr.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/apache-v1.1.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/apache-v2.0.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/asm.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/bouncy_castle_license.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/bsd.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/cddl-v1.0.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/cpl-v10.html
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/crystalclear.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/django.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/dom4j.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/epl-v1.0.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/fbsd.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/freemarker.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/gpl-v2.0.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/gpl.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/gtest.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/iconsweets_license.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/jamon.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/jmock.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/jquery.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/jtidy.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/lgpl-3.0.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/lgpl-v2.0.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/lgpl-v2.1.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/lgpl-v3.0.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/lgpl.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/matplotlib.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/mit.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/mpl-v1_0.htm
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/npl-1_1.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/path.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/pil.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/postgresql.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/psf-v2.0.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/psf-v2.5.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/scons.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/slf4j.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/tablelayout.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/which.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/zlib-libpng.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/share/licenses/zpl-v2.1.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/README.txt
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/misc/Makefile
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/misc/current.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/misc/enums.py
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__1/OMERO3__7.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__10/OMERO3A__9.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__11/OMERO3A__10.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__11/OMERO3A__5.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__2/OMERO3A__1.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__3/OMERO3A__2.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__3/OMERO3__5.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__4/OMERO3A__3.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__4/OMERO3__5.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__5/OMERO3A__4.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__6/OMERO3A__5.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__7/OMERO3A__6.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__8/OMERO3A__6.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3A__9/OMERO3A__8.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3__4/OMERO3__1.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3__5/OMERO3__4.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3__6/OMERO3__5.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO3__7/OMERO3__6.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO4.1__0/OMERO4__0.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO4.2__0/OMERO4.1__0.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO4.3__0/OMERO4.2__0.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO4.4__0/OMERO4.1__0.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO4.4__0/OMERO4.3__0.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO4__0/OMERO3A__11.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.0__0/OMERO4.4__0.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.4__0/psql-footer.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.4__0/psql-header.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.4__0/schema.sql
00:59:05 inflating: OMERO.server-5.6.3-548-bf8a6734d5-ice36/sql/psql/OMERO5.4__0/views.sql
00:59:05 + rm -f OMERO.server-5.6.3-548-bf8a6734d5-ice36.zip
00:59:05 + mv /home/omero/workspace/OMERO-server/OMERO.server-5.6.3-548-bf8a6734d5-ice36 /home/omero/workspace/OMERO-server/OMERO.server
00:59:05 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate
00:59:05 ++ deactivate nondestructive
00:59:05 ++ '[' -n '' ']'
00:59:05 ++ '[' -n '' ']'
00:59:05 ++ '[' -n /bin/bash -o -n '' ']'
00:59:05 ++ hash -r
00:59:05 ++ '[' -n '' ']'
00:59:05 ++ unset VIRTUAL_ENV
00:59:05 ++ '[' '!' nondestructive = nondestructive ']'
00:59:05 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
00:59:05 ++ export VIRTUAL_ENV
00:59:05 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:59:05 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:59:05 ++ export PATH
00:59:05 ++ '[' -n '' ']'
00:59:05 ++ '[' -z '' ']'
00:59:05 ++ _OLD_VIRTUAL_PS1=
00:59:05 ++ PS1='(.venv3) '
00:59:05 ++ export PS1
00:59:05 ++ '[' -n /bin/bash -o -n '' ']'
00:59:05 ++ hash -r
00:59:05 + pip install https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl
00:59:05 Collecting zeroc-ice==3.6.5
00:59:06 Downloading https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl (31.3 MB)
00:59:08 Installing collected packages: zeroc-ice
00:59:08 Successfully installed zeroc-ice-3.6.5
00:59:08 + pip install -U pip future
00:59:09 Requirement already satisfied: pip in ./.venv3/lib/python3.9/site-packages (21.2.3)
00:59:09 Collecting pip
00:59:09 Using cached pip-25.0.1-py3-none-any.whl (1.8 MB)
00:59:09 Collecting future
00:59:09 Using cached future-1.0.0-py3-none-any.whl (491 kB)
00:59:09 Installing collected packages: pip, future
00:59:09 Attempting uninstall: pip
00:59:09 Found existing installation: pip 21.2.3
00:59:09 Uninstalling pip-21.2.3:
00:59:10 Successfully uninstalled pip-21.2.3
00:59:11 Successfully installed future-1.0.0 pip-25.0.1
00:59:11 + pip install markdown
00:59:12 Collecting markdown
00:59:12 Using cached Markdown-3.7-py3-none-any.whl.metadata (7.0 kB)
00:59:12 Collecting importlib-metadata>=4.4 (from markdown)
00:59:12 Using cached importlib_metadata-8.6.1-py3-none-any.whl.metadata (4.7 kB)
00:59:12 Collecting zipp>=3.20 (from importlib-metadata>=4.4->markdown)
00:59:12 Using cached zipp-3.21.0-py3-none-any.whl.metadata (3.7 kB)
00:59:12 Using cached Markdown-3.7-py3-none-any.whl (106 kB)
00:59:12 Using cached importlib_metadata-8.6.1-py3-none-any.whl (26 kB)
00:59:12 Using cached zipp-3.21.0-py3-none-any.whl (9.6 kB)
00:59:12 Installing collected packages: zipp, importlib-metadata, markdown
00:59:12 Successfully installed importlib-metadata-8.6.1 markdown-3.7 zipp-3.21.0
00:59:12 + pip install reportlab
00:59:13 Collecting reportlab
00:59:13 Using cached reportlab-4.3.1-py3-none-any.whl.metadata (1.7 kB)
00:59:13 Collecting pillow>=9.0.0 (from reportlab)
00:59:13 Using cached pillow-11.1.0-cp39-cp39-manylinux_2_28_x86_64.whl.metadata (9.1 kB)
00:59:13 Collecting chardet (from reportlab)
00:59:14 Using cached chardet-5.2.0-py3-none-any.whl.metadata (3.4 kB)
00:59:14 Using cached reportlab-4.3.1-py3-none-any.whl (1.9 MB)
00:59:14 Using cached pillow-11.1.0-cp39-cp39-manylinux_2_28_x86_64.whl (4.5 MB)
00:59:14 Using cached chardet-5.2.0-py3-none-any.whl (199 kB)
00:59:14 Installing collected packages: pillow, chardet, reportlab
00:59:15 Successfully installed chardet-5.2.0 pillow-11.1.0 reportlab-4.3.1
00:59:15 + pip install omego
00:59:16 Collecting omego
00:59:16 Using cached omego-0.7.0-py3-none-any.whl
00:59:16 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omego) (1.0.0)
00:59:16 Collecting yaclifw>=0.1.1 (from omego)
00:59:16 Using cached yaclifw-0.2.0-py3-none-any.whl
00:59:16 Collecting six (from yaclifw>=0.1.1->omego)
00:59:17 Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
00:59:17 Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
00:59:17 Installing collected packages: six, yaclifw, omego
00:59:17 Successfully installed omego-0.7.0 six-1.17.0 yaclifw-0.2.0
00:59:17 + pip install tables
00:59:17 Collecting tables
00:59:17 Using cached tables-3.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.3 kB)
00:59:18 Collecting numpy>=1.19.0 (from tables)
00:59:18 Using cached numpy-2.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (60 kB)
00:59:18 Collecting numexpr>=2.6.2 (from tables)
00:59:18 Using cached numexpr-2.10.2-cp39-cp39-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (8.1 kB)
00:59:18 Collecting packaging (from tables)
00:59:18 Using cached packaging-24.2-py3-none-any.whl.metadata (3.2 kB)
00:59:18 Collecting py-cpuinfo (from tables)
00:59:18 Using cached py_cpuinfo-9.0.0-py3-none-any.whl.metadata (794 bytes)
00:59:19 Collecting blosc2>=2.3.0 (from tables)
00:59:19 Using cached blosc2-2.5.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (9.2 kB)
00:59:19 Collecting ndindex>=1.4 (from blosc2>=2.3.0->tables)
00:59:19 Using cached ndindex-1.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.4 kB)
00:59:19 Collecting msgpack (from blosc2>=2.3.0->tables)
00:59:19 Using cached msgpack-1.1.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (8.4 kB)
00:59:19 Using cached tables-3.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (7.5 MB)
00:59:19 Using cached blosc2-2.5.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (4.4 MB)
00:59:19 Using cached numexpr-2.10.2-cp39-cp39-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (396 kB)
00:59:19 Using cached numpy-2.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (19.5 MB)
00:59:20 Using cached packaging-24.2-py3-none-any.whl (65 kB)
00:59:20 Using cached py_cpuinfo-9.0.0-py3-none-any.whl (22 kB)
00:59:20 Using cached ndindex-1.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (478 kB)
00:59:20 Using cached msgpack-1.1.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (377 kB)
00:59:20 Installing collected packages: py-cpuinfo, packaging, numpy, ndindex, msgpack, numexpr, blosc2, tables
00:59:23 Successfully installed blosc2-2.5.1 msgpack-1.1.0 ndindex-1.9.2 numexpr-2.10.2 numpy-2.0.2 packaging-24.2 py-cpuinfo-9.0.0 tables-3.9.2
00:59:23 + pip install jinja2
00:59:24 Collecting jinja2
00:59:24 Using cached jinja2-3.1.6-py3-none-any.whl.metadata (2.9 kB)
00:59:24 Collecting MarkupSafe>=2.0 (from jinja2)
00:59:24 Using cached MarkupSafe-3.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (4.0 kB)
00:59:24 Using cached jinja2-3.1.6-py3-none-any.whl (134 kB)
00:59:25 Using cached MarkupSafe-3.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (20 kB)
00:59:25 Installing collected packages: MarkupSafe, jinja2
00:59:25 Successfully installed MarkupSafe-3.0.2 jinja2-3.1.6
00:59:25 + pip install omero-py
00:59:26 Collecting omero-py
00:59:26 Using cached omero_py-5.19.6-py3-none-any.whl.metadata (6.4 kB)
00:59:26 Collecting urllib3<2 (from omero-py)
00:59:26 Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
00:59:26 Collecting appdirs (from omero-py)
00:59:26 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
00:59:26 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py) (1.0.0)
00:59:26 Collecting numpy<2 (from omero-py)
00:59:26 Using cached numpy-1.26.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (61 kB)
00:59:26 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py) (11.1.0)
00:59:26 Collecting PyYAML (from omero-py)
00:59:26 Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
00:59:26 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py) (3.6.5)
00:59:26 Collecting requests (from omero-py)
00:59:26 Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB)
00:59:26 Collecting portalocker (from omero-py)
00:59:26 Using cached portalocker-3.1.1-py3-none-any.whl.metadata (8.6 kB)
00:59:26 Collecting charset-normalizer<4,>=2 (from requests->omero-py)
00:59:26 Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB)
00:59:27 Collecting idna<4,>=2.5 (from requests->omero-py)
00:59:27 Using cached idna-3.10-py3-none-any.whl.metadata (10 kB)
00:59:27 Collecting certifi>=2017.4.17 (from requests->omero-py)
00:59:27 Using cached certifi-2025.1.31-py3-none-any.whl.metadata (2.5 kB)
00:59:27 Using cached omero_py-5.19.6-py3-none-any.whl (2.8 MB)
00:59:27 Using cached numpy-1.26.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (18.2 MB)
00:59:27 Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
00:59:27 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
00:59:27 Using cached portalocker-3.1.1-py3-none-any.whl (19 kB)
00:59:27 Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB)
00:59:28 Using cached requests-2.32.3-py3-none-any.whl (64 kB)
00:59:28 Using cached certifi-2025.1.31-py3-none-any.whl (166 kB)
00:59:28 Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (146 kB)
00:59:28 Using cached idna-3.10-py3-none-any.whl (70 kB)
00:59:28 Installing collected packages: appdirs, urllib3, PyYAML, portalocker, numpy, idna, charset-normalizer, certifi, requests, omero-py
00:59:28 Attempting uninstall: numpy
00:59:28 Found existing installation: numpy 2.0.2
00:59:28 Uninstalling numpy-2.0.2:
00:59:28 Successfully uninstalled numpy-2.0.2
00:59:33 Successfully installed PyYAML-6.0.2 appdirs-1.4.4 certifi-2025.1.31 charset-normalizer-3.4.1 idna-3.10 numpy-1.26.4 omero-py-5.19.6 portalocker-3.1.1 requests-2.32.3 urllib3-1.26.20
00:59:33 + pip install git+https://github.com/snoopycrimecop/omero-metadata.git@merge_ci#egg=omero-metadata
00:59:33 Collecting omero-metadata
00:59:33 Cloning https://github.com/snoopycrimecop/omero-metadata.git (to revision merge_ci) to /tmp/pip-install-zd7vhuqy/omero-metadata_d9c68bbee8874a14a77c0e5e7770d8ec
00:59:34 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-metadata.git /tmp/pip-install-zd7vhuqy/omero-metadata_d9c68bbee8874a14a77c0e5e7770d8ec
00:59:35 Resolved https://github.com/snoopycrimecop/omero-metadata.git to commit fcba3b96b926e436d2de71b276df714ab1bcd9e2
00:59:35 Installing build dependencies: started
00:59:38 Installing build dependencies: finished with status 'done'
00:59:38 Getting requirements to build wheel: started
00:59:39 Getting requirements to build wheel: finished with status 'done'
00:59:39 Preparing metadata (pyproject.toml): started
00:59:39 Preparing metadata (pyproject.toml): finished with status 'done'
00:59:39 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib/python3.9/site-packages (from omero-metadata) (5.19.6)
00:59:39 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-metadata) (6.0.2)
00:59:39 Requirement already satisfied: jinja2 in ./.venv3/lib/python3.9/site-packages (from omero-metadata) (3.1.6)
00:59:39 Collecting pandas (from omero-metadata)
00:59:39 Using cached pandas-2.2.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (89 kB)
00:59:39 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.26.20)
00:59:39 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.4.4)
00:59:39 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.0.0)
00:59:39 Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.26.4)
00:59:39 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (11.1.0)
00:59:39 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (3.6.5)
00:59:39 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (2.32.3)
00:59:39 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (3.1.1)
00:59:39 Requirement already satisfied: MarkupSafe>=2.0 in ./.venv3/lib/python3.9/site-packages (from jinja2->omero-metadata) (3.0.2)
00:59:39 Collecting python-dateutil>=2.8.2 (from pandas->omero-metadata)
00:59:39 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl.metadata (8.4 kB)
00:59:39 Collecting pytz>=2020.1 (from pandas->omero-metadata)
00:59:39 Using cached pytz-2025.1-py2.py3-none-any.whl.metadata (22 kB)
00:59:39 Collecting tzdata>=2022.7 (from pandas->omero-metadata)
00:59:39 Downloading tzdata-2025.2-py2.py3-none-any.whl.metadata (1.4 kB)
00:59:40 Requirement already satisfied: six>=1.5 in ./.venv3/lib/python3.9/site-packages (from python-dateutil>=2.8.2->pandas->omero-metadata) (1.17.0)
00:59:40 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.4.1)
00:59:40 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.10)
00:59:40 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2025.1.31)
00:59:40 Using cached pandas-2.2.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (13.1 MB)
00:59:40 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl (229 kB)
00:59:40 Using cached pytz-2025.1-py2.py3-none-any.whl (507 kB)
00:59:40 Downloading tzdata-2025.2-py2.py3-none-any.whl (347 kB)
00:59:40 Building wheels for collected packages: omero-metadata
00:59:40 Building wheel for omero-metadata (pyproject.toml): started
00:59:40 Building wheel for omero-metadata (pyproject.toml): finished with status 'done'
00:59:40 Created wheel for omero-metadata: filename=omero_metadata-0.13.1.dev0-py3-none-any.whl size=39281 sha256=6fe549026d5a40f11d73b52328de8d002446c6b5488748751a9c5d6503a4a5af
00:59:40 Stored in directory: /tmp/pip-ephem-wheel-cache-678uetgy/wheels/64/09/47/3b86b706f8f6f4bec1b7fd6641d2e4a09814e754fa4c85c82d
00:59:40 Successfully built omero-metadata
00:59:40 Installing collected packages: pytz, tzdata, python-dateutil, pandas, omero-metadata
00:59:46 Successfully installed omero-metadata-0.13.1.dev0 pandas-2.2.3 python-dateutil-2.9.0.post0 pytz-2025.1 tzdata-2025.2
00:59:46 + pip install git+https://github.com/snoopycrimecop/omero-cli-render.git@merge_ci#egg=omero-cli-render
00:59:46 Collecting omero-cli-render
00:59:46 Cloning https://github.com/snoopycrimecop/omero-cli-render.git (to revision merge_ci) to /tmp/pip-install-e7fpspol/omero-cli-render_b1fd0a8122cb423c8b9fcc4382c4e19c
00:59:46 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-render.git /tmp/pip-install-e7fpspol/omero-cli-render_b1fd0a8122cb423c8b9fcc4382c4e19c
00:59:47 Running command git checkout -b merge_ci --track origin/merge_ci
00:59:47 Switched to a new branch 'merge_ci'
00:59:47 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:59:47 Resolved https://github.com/snoopycrimecop/omero-cli-render.git to commit ca24a40fa642997e4bd077bdaa116d784dae3500
00:59:47 Installing build dependencies: started
00:59:49 Installing build dependencies: finished with status 'done'
00:59:49 Getting requirements to build wheel: started
00:59:49 Getting requirements to build wheel: finished with status 'done'
00:59:49 Preparing metadata (pyproject.toml): started
00:59:50 Preparing metadata (pyproject.toml): finished with status 'done'
00:59:50 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-cli-render) (6.0.2)
00:59:50 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib/python3.9/site-packages (from omero-cli-render) (5.19.6)
00:59:50 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.26.20)
00:59:50 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.4.4)
00:59:50 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.0.0)
00:59:50 Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.26.4)
00:59:50 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (11.1.0)
00:59:50 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.6.5)
00:59:50 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.32.3)
00:59:50 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.1.1)
00:59:50 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.4.1)
00:59:50 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.10)
00:59:50 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2025.1.31)
00:59:50 Building wheels for collected packages: omero-cli-render
00:59:50 Building wheel for omero-cli-render (pyproject.toml): started
00:59:50 Building wheel for omero-cli-render (pyproject.toml): finished with status 'done'
00:59:50 Created wheel for omero-cli-render: filename=omero_cli_render-0.8.2.dev0-py3-none-any.whl size=19594 sha256=2019de4408506bcb5d8d681ae0f341f3865b0a6fc9984a6361949a043b9cbe1e
00:59:50 Stored in directory: /tmp/pip-ephem-wheel-cache-jngmqtds/wheels/58/32/1b/746489b3c7c17a98c6cd7195bdd3b426dd4137caeb1045a994
00:59:50 Successfully built omero-cli-render
00:59:50 Installing collected packages: omero-cli-render
00:59:50 Successfully installed omero-cli-render-0.8.2.dev0
00:59:50 + pip install git+https://github.com/snoopycrimecop/omero-cli-duplicate.git@merge_ci#egg=omero-cli-duplicate
00:59:50 Collecting omero-cli-duplicate
00:59:50 Cloning https://github.com/snoopycrimecop/omero-cli-duplicate.git (to revision merge_ci) to /tmp/pip-install-mtxquuk5/omero-cli-duplicate_973df2383522488eab0f061b867ebdef
00:59:51 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-duplicate.git /tmp/pip-install-mtxquuk5/omero-cli-duplicate_973df2383522488eab0f061b867ebdef
00:59:51 Running command git checkout -b merge_ci --track origin/merge_ci
00:59:52 Switched to a new branch 'merge_ci'
00:59:52 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:59:52 Resolved https://github.com/snoopycrimecop/omero-cli-duplicate.git to commit 880406ba4c7830451ebcde5b02ecf975c9ab68cc
00:59:52 Installing build dependencies: started
00:59:54 Installing build dependencies: finished with status 'done'
00:59:54 Getting requirements to build wheel: started
00:59:54 Getting requirements to build wheel: finished with status 'done'
00:59:54 Preparing metadata (pyproject.toml): started
00:59:54 Preparing metadata (pyproject.toml): finished with status 'done'
00:59:54 Requirement already satisfied: omero-py>=5.8 in ./.venv3/lib/python3.9/site-packages (from omero-cli-duplicate) (5.19.6)
00:59:54 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.26.20)
00:59:54 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.4.4)
00:59:54 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.0.0)
00:59:54 Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.26.4)
00:59:54 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (11.1.0)
00:59:54 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (6.0.2)
00:59:54 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.6.5)
00:59:54 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.32.3)
00:59:54 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.1.1)
00:59:54 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.4.1)
00:59:54 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.10)
00:59:54 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2025.1.31)
00:59:54 Building wheels for collected packages: omero-cli-duplicate
00:59:54 Building wheel for omero-cli-duplicate (pyproject.toml): started
00:59:54 Building wheel for omero-cli-duplicate (pyproject.toml): finished with status 'done'
00:59:54 Created wheel for omero-cli-duplicate: filename=omero_cli_duplicate-0.4.1.dev0-py3-none-any.whl size=11540 sha256=d372e27e06309b6ac0dce0fb83daf757b55c0bf3fe0835767795a24ba4785dd4
00:59:54 Stored in directory: /tmp/pip-ephem-wheel-cache-2y98a1um/wheels/f1/55/ac/0cb8b093a4c417e5157143839711e7613efa64eaa21c29ef84
00:59:54 Successfully built omero-cli-duplicate
00:59:54 Installing collected packages: omero-cli-duplicate
00:59:54 Successfully installed omero-cli-duplicate-0.4.1.dev0
00:59:55 + pip install omero-certificates
00:59:55 Collecting omero-certificates
00:59:55 Using cached omero_certificates-0.4.0-py3-none-any.whl.metadata (3.3 kB)
00:59:55 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib/python3.9/site-packages (from omero-certificates) (5.19.6)
00:59:55 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.26.20)
00:59:55 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.4.4)
00:59:55 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.0.0)
00:59:55 Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.26.4)
00:59:55 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (11.1.0)
00:59:55 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (6.0.2)
00:59:55 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (3.6.5)
00:59:55 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (2.32.3)
00:59:55 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (3.1.1)
00:59:55 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.4.1)
00:59:55 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.10)
00:59:55 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2025.1.31)
00:59:55 Using cached omero_certificates-0.4.0-py3-none-any.whl (11 kB)
00:59:55 Installing collected packages: omero-certificates
00:59:56 Successfully installed omero-certificates-0.4.0
00:59:56 + for x in *.tar.gz
00:59:56 + pip install -U omero_dropbox-5.7.1.dev0.tar.gz
00:59:56 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
00:59:56 Installing build dependencies: started
00:59:58 Installing build dependencies: finished with status 'done'
00:59:58 Getting requirements to build wheel: started
00:59:58 Getting requirements to build wheel: finished with status 'done'
00:59:58 Preparing metadata (pyproject.toml): started
00:59:58 Preparing metadata (pyproject.toml): finished with status 'done'
00:59:58 Requirement already satisfied: omero-py in ./.venv3/lib/python3.9/site-packages (from omero-dropbox==5.7.1.dev0) (5.19.6)
00:59:58 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.26.20)
00:59:58 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
00:59:58 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
00:59:58 Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.26.4)
00:59:58 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (11.1.0)
00:59:58 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.2)
00:59:58 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
00:59:58 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.32.3)
00:59:58 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.1.1)
00:59:58 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.1)
00:59:58 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.10)
00:59:58 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2025.1.31)
00:59:58 Building wheels for collected packages: omero-dropbox
00:59:58 Building wheel for omero-dropbox (pyproject.toml): started
00:59:59 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
00:59:59 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49138 sha256=8b2cfe3de8474e8b60bd3626fe81480b0d4d8bb9eaff2cf725acd7f4ef71c403
00:59:59 Stored in directory: /home/omero/.cache/pip/wheels/eb/76/85/58476368b176f793423899407c96293c22f9c9edc28cf54079
00:59:59 Successfully built omero-dropbox
00:59:59 Installing collected packages: omero-dropbox
00:59:59 Successfully installed omero-dropbox-5.7.1.dev0
00:59:59 + for x in *.tar.gz
00:59:59 + pip install -U omero_marshal-0.9.1.dev0.tar.gz
00:59:59 Processing ./omero_marshal-0.9.1.dev0.tar.gz
01:00:00 Installing build dependencies: started
01:00:02 Installing build dependencies: finished with status 'done'
01:00:02 Getting requirements to build wheel: started
01:00:02 Getting requirements to build wheel: finished with status 'done'
01:00:02 Preparing metadata (pyproject.toml): started
01:00:03 Preparing metadata (pyproject.toml): finished with status 'done'
01:00:03 Building wheels for collected packages: omero_marshal
01:00:03 Building wheel for omero_marshal (pyproject.toml): started
01:00:04 Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
01:00:04 Created wheel for omero_marshal: filename=omero_marshal-0.9.1.dev0-py3-none-any.whl size=88126 sha256=90d459664516f920216fdf46b695aefa8abee1f55a1f492aa53c7d1e5d73e3b3
01:00:04 Stored in directory: /home/omero/.cache/pip/wheels/8b/40/f1/dbed071eff57c96e0824ead2a420a7a1a080f7fbdfe0431d7f
01:00:04 Successfully built omero_marshal
01:00:04 Installing collected packages: omero_marshal
01:00:04 Successfully installed omero_marshal-0.9.1.dev0
01:00:04 + for x in *.tar.gz
01:00:04 + pip install -U omero_py-5.19.7.dev0.tar.gz
01:00:04 Processing ./omero_py-5.19.7.dev0.tar.gz
01:00:05 Installing build dependencies: started
01:00:06 Installing build dependencies: finished with status 'done'
01:00:07 Getting requirements to build wheel: started
01:00:07 Getting requirements to build wheel: finished with status 'done'
01:00:07 Preparing metadata (pyproject.toml): started
01:00:07 Preparing metadata (pyproject.toml): finished with status 'done'
01:00:07 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.7.dev0) (1.26.20)
01:00:07 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.7.dev0) (1.4.4)
01:00:07 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.7.dev0) (1.0.0)
01:00:07 Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.7.dev0) (1.26.4)
01:00:07 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.7.dev0) (11.1.0)
01:00:07 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.7.dev0) (6.0.2)
01:00:07 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.7.dev0) (3.6.5)
01:00:07 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.7.dev0) (2.32.3)
01:00:07 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.7.dev0) (3.1.1)
01:00:07 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.7.dev0) (3.4.1)
01:00:07 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.7.dev0) (3.10)
01:00:07 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.7.dev0) (2025.1.31)
01:00:07 Building wheels for collected packages: omero-py
01:00:07 Building wheel for omero-py (pyproject.toml): started
01:00:08 Building wheel for omero-py (pyproject.toml): finished with status 'done'
01:00:08 Created wheel for omero-py: filename=omero_py-5.19.7.dev0-py3-none-any.whl size=2783224 sha256=92dd4710afbd8932f634f62ab9816b3ff6dcff1c194c9dac01f5d58647e9411f
01:00:08 Stored in directory: /home/omero/.cache/pip/wheels/f7/4b/64/80f70975ab0fd7430ae6a8e09a093688abe603abcb5090fc1b
01:00:08 Successfully built omero-py
01:00:09 Installing collected packages: omero-py
01:00:09 Attempting uninstall: omero-py
01:00:09 Found existing installation: omero-py 5.19.6
01:00:09 Uninstalling omero-py-5.19.6:
01:00:09 Successfully uninstalled omero-py-5.19.6
01:00:11 Successfully installed omero-py-5.19.7.dev0
01:00:11 + for x in *.tar.gz
01:00:11 + pip install -U omero_scripts-5.9.1.dev0.tar.gz
01:00:12 Processing ./omero_scripts-5.9.1.dev0.tar.gz
01:00:12 Installing build dependencies: started
01:00:14 Installing build dependencies: finished with status 'done'
01:00:14 Getting requirements to build wheel: started
01:00:14 Getting requirements to build wheel: finished with status 'done'
01:00:14 Preparing metadata (pyproject.toml): started
01:00:14 Preparing metadata (pyproject.toml): finished with status 'done'
01:00:14 Building wheels for collected packages: omero-scripts
01:00:14 Building wheel for omero-scripts (pyproject.toml): started
01:00:14 Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
01:00:14 Created wheel for omero-scripts: filename=omero_scripts-5.9.1.dev0-py3-none-any.whl size=136849 sha256=f89c59c24890a71c9af21928578e08defec6a2b72fc4284ae0f51a74d2c3dcf4
01:00:14 Stored in directory: /home/omero/.cache/pip/wheels/4d/ea/13/654c1b7c00351342c84d3e545702a0063ab8e12d260d83323c
01:00:14 Successfully built omero-scripts
01:00:14 Installing collected packages: omero-scripts
01:00:15 Successfully installed omero-scripts-5.9.1.dev0
01:00:15 + for x in *.tar.gz
01:00:15 + pip install -U omero_web-5.29.1.dev0.tar.gz
01:00:15 Processing ./omero_web-5.29.1.dev0.tar.gz
01:00:15 Installing build dependencies: started
01:00:17 Installing build dependencies: finished with status 'done'
01:00:17 Getting requirements to build wheel: started
01:00:17 Getting requirements to build wheel: finished with status 'done'
01:00:17 Preparing metadata (pyproject.toml): started
01:00:18 Preparing metadata (pyproject.toml): finished with status 'done'
01:00:18 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.29.1.dev0) (5.19.7.dev0)
01:00:18 Collecting concurrent-log-handler>=0.9.20 (from omero-web==5.29.1.dev0)
01:00:18 Using cached concurrent_log_handler-0.9.25-py3-none-any.whl.metadata (17 kB)
01:00:18 Collecting Django<4.3,>=4.2.3 (from omero-web==5.29.1.dev0)
01:00:18 Using cached Django-4.2.20-py3-none-any.whl.metadata (4.1 kB)
01:00:19 Collecting django-pipeline (from omero-web==5.29.1.dev0)
01:00:19 Using cached django_pipeline-4.0.0-py3-none-any.whl.metadata (5.8 kB)
01:00:19 Collecting django-cors-headers==3.7.0 (from omero-web==5.29.1.dev0)
01:00:19 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
01:00:19 Collecting django-csp (from omero-web==5.29.1.dev0)
01:00:19 Using cached django_csp-3.8-py3-none-any.whl.metadata (2.7 kB)
01:00:19 Collecting whitenoise>=5.3.0 (from omero-web==5.29.1.dev0)
01:00:19 Using cached whitenoise-6.9.0-py3-none-any.whl.metadata (3.6 kB)
01:00:19 Collecting gunicorn>=19.3 (from omero-web==5.29.1.dev0)
01:00:19 Using cached gunicorn-23.0.0-py3-none-any.whl.metadata (4.4 kB)
01:00:19 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.29.1.dev0) (0.9.1.dev0)
01:00:19 Requirement already satisfied: Pillow in ./.venv3/lib/python3.9/site-packages (from omero-web==5.29.1.dev0) (11.1.0)
01:00:19 Requirement already satisfied: pytz in ./.venv3/lib/python3.9/site-packages (from omero-web==5.29.1.dev0) (2025.1)
01:00:19 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-web==5.29.1.dev0) (3.1.1)
01:00:19 Requirement already satisfied: packaging in ./.venv3/lib/python3.9/site-packages (from omero-web==5.29.1.dev0) (24.2)
01:00:19 Collecting importlib-resources (from omero-web==5.29.1.dev0)
01:00:19 Using cached importlib_resources-6.5.2-py3-none-any.whl.metadata (3.9 kB)
01:00:19 Collecting asgiref<4,>=3.6.0 (from Django<4.3,>=4.2.3->omero-web==5.29.1.dev0)
01:00:19 Using cached asgiref-3.8.1-py3-none-any.whl.metadata (9.3 kB)
01:00:19 Collecting sqlparse>=0.3.1 (from Django<4.3,>=4.2.3->omero-web==5.29.1.dev0)
01:00:19 Using cached sqlparse-0.5.3-py3-none-any.whl.metadata (3.9 kB)
01:00:19 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.29.1.dev0) (1.26.20)
01:00:19 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.29.1.dev0) (1.4.4)
01:00:19 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.29.1.dev0) (1.0.0)
01:00:19 Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.29.1.dev0) (1.26.4)
01:00:19 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.29.1.dev0) (6.0.2)
01:00:19 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.29.1.dev0) (3.6.5)
01:00:19 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.29.1.dev0) (2.32.3)
01:00:19 Requirement already satisfied: setuptools in ./.venv3/lib/python3.9/site-packages (from django-pipeline->omero-web==5.29.1.dev0) (53.0.0)
01:00:20 Collecting wheel (from django-pipeline->omero-web==5.29.1.dev0)
01:00:20 Using cached wheel-0.45.1-py3-none-any.whl.metadata (2.3 kB)
01:00:20 Requirement already satisfied: zipp>=3.1.0 in ./.venv3/lib/python3.9/site-packages (from importlib-resources->omero-web==5.29.1.dev0) (3.21.0)
01:00:20 Collecting typing-extensions>=4 (from asgiref<4,>=3.6.0->Django<4.3,>=4.2.3->omero-web==5.29.1.dev0)
01:00:20 Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB)
01:00:20 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.1.dev0) (3.4.1)
01:00:20 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.1.dev0) (3.10)
01:00:20 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.1.dev0) (2025.1.31)
01:00:20 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
01:00:20 Using cached concurrent_log_handler-0.9.25-py3-none-any.whl (25 kB)
01:00:20 Using cached Django-4.2.20-py3-none-any.whl (8.0 MB)
01:00:20 Using cached gunicorn-23.0.0-py3-none-any.whl (85 kB)
01:00:20 Using cached whitenoise-6.9.0-py3-none-any.whl (20 kB)
01:00:20 Using cached django_csp-3.8-py3-none-any.whl (17 kB)
01:00:20 Using cached django_pipeline-4.0.0-py3-none-any.whl (75 kB)
01:00:20 Using cached importlib_resources-6.5.2-py3-none-any.whl (37 kB)
01:00:21 Using cached asgiref-3.8.1-py3-none-any.whl (23 kB)
01:00:21 Using cached sqlparse-0.5.3-py3-none-any.whl (44 kB)
01:00:21 Using cached wheel-0.45.1-py3-none-any.whl (72 kB)
01:00:21 Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB)
01:00:21 Building wheels for collected packages: omero-web
01:00:21 Building wheel for omero-web (pyproject.toml): started
01:00:22 Building wheel for omero-web (pyproject.toml): finished with status 'done'
01:00:22 Created wheel for omero-web: filename=omero_web-5.29.1.dev0-py3-none-any.whl size=2817949 sha256=308fda65ea911e8ea1f67b70c4f0b7a97d40a68055d191124df56977b0de70e9
01:00:22 Stored in directory: /home/omero/.cache/pip/wheels/20/6a/be/a0eb92c362960a201e1b2f293382a92507134b48bed64ccadd
01:00:22 Successfully built omero-web
01:00:23 Installing collected packages: whitenoise, wheel, typing-extensions, sqlparse, importlib-resources, gunicorn, concurrent-log-handler, django-pipeline, asgiref, Django, django-csp, django-cors-headers, omero-web
01:00:26 Successfully installed Django-4.2.20 asgiref-3.8.1 concurrent-log-handler-0.9.25 django-cors-headers-3.7.0 django-csp-3.8 django-pipeline-4.0.0 gunicorn-23.0.0 importlib-resources-6.5.2 omero-web-5.29.1.dev0 sqlparse-0.5.3 typing-extensions-4.12.2 wheel-0.45.1 whitenoise-6.9.0
01:00:26 + wget https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
01:00:28 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
01:00:28 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
01:00:28 --2025-03-24 01:00:28-- https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
01:00:28 Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.111.133, 185.199.109.133, 185.199.110.133, ...
01:00:28 Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.111.133|:443... connected.
01:00:28 HTTP request sent, awaiting response... 200 OK
01:00:28 Length: 115659 (113K) [text/plain]
01:00:28 Saving to: ‘Figure_To_Pdf.py’
01:00:28
01:00:28 0K .......... .......... .......... .......... .......... 44% 3.33M 0s
01:00:28 50K .......... .......... .......... .......... .......... 88% 5.21M 0s
01:00:28 100K .......... .. 100% 149M=0.02s
01:00:28
01:00:28 2025-03-24 01:00:28 (4.57 MB/s) - ‘Figure_To_Pdf.py’ saved [115659/115659]
01:00:28
01:00:28 + chmod 755 Figure_To_Pdf.py
01:00:28 + mv Figure_To_Pdf.py /home/omero/workspace/OMERO-server/OMERO.server/lib/scripts/omero/figure_scripts
01:00:28 + omero config set omero.db.name OMERO-server
01:00:30 + omero config set omero.db.host pg
01:00:31 + omero config set omero.db.user postgres
01:00:32 + omero config set omero.data.dir /home/omero/omero-server-data
01:00:34 + omero config set omero.fs.repo.path %user%_%userId%/%thread%//%year%-%month%/%day%/%time%
01:00:35 + omero config set omero.db.poolsize 25
01:00:37 + omero config set omero.security.trustStore /etc/pki/ca-trust/extracted/java/cacerts
01:00:38 + omero config set omero.security.trustStorePassword changeit
01:00:40 + omero config set omero.mail.config true
01:00:41 + omero config set omero.mail.from qa@openmicroscopy.org.uk
01:00:43 + omero config set omero.mail.host smtp.dundee.ac.uk
01:00:44 + omero config set omero.server.nodedescriptors master:Blitz-0,Indexer-0,Processor-0,Storm,Tables-0
01:00:46 + omero config set omero.jvmcfg.append '--add-opens java.base/java.lang=ALL-UNNAMED --add-exports java.naming/com.sun.jndi.ldap=ALL-UNNAMED'
01:00:47 + omero certificates
01:00:48 OpenSSL 3.0.7 1 Nov 2022 (Library: OpenSSL 3.0.7 1 Nov 2022)
01:00:48 certificates created: /home/omero/omero-server-data/certs/server.pem /home/omero/omero-server-data/certs/server.p12
01:00:49 + '[' false = true ']'
01:00:49 + echo 'Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade'
01:00:49 Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade
01:00:49 + omego db -vvv upgrade --serverdir /home/omero/workspace/OMERO-server/OMERO.server --dbname OMERO-server
01:00:49 2025-03-24 01:00:49,423 [ omego.db] DEBUG dbcommand => upgrade
01:00:49 2025-03-24 01:00:49,423 [ omego.db] DEBUG dbhost => localhost
01:00:49 2025-03-24 01:00:49,423 [ omego.db] DEBUG dbname => OMERO-server
01:00:49 2025-03-24 01:00:49,424 [ omego.db] DEBUG dbpass => omero
01:00:49 2025-03-24 01:00:49,424 [ omego.db] DEBUG dbuser => omero
01:00:49 2025-03-24 01:00:49,424 [ omego.db] DEBUG rootpass => omero
01:00:49 2025-03-24 01:00:49,424 [ omego.db] DEBUG serverdir => /home/omero/workspace/OMERO-server/OMERO.server
01:00:49 2025-03-24 01:00:49,424 [omego.extern] INFO Executing : omero version
01:00:50 OMERO.py version:
01:00:50 OMERO.server version:
01:00:50 5.6.3-548-bf8a6734d5-ice36
01:00:50 5.19.7.dev0
01:00:50 2025-03-24 01:00:50,968 [omego.extern] INFO Completed [1.544 s]
01:00:50 2025-03-24 01:00:50,968 [omego.extern] DEBUG Using omero CLI from omero
01:00:50 2025-03-24 01:00:50,968 [ omego.db] INFO DbAdmin: DbAdmin /home/omero/workspace/OMERO-server/OMERO.server ...
01:00:50 2025-03-24 01:00:50,968 [omego.extern] INFO Running [current environment]: omero config get --show-password
01:00:50 2025-03-24 01:00:50,968 [omego.extern] INFO Executing : omero config get --show-password
01:00:52 2025-03-24 01:00:52,394 [omego.extern] INFO Completed [1.425 s]
01:00:52 2025-03-24 01:00:52,394 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
01:00:52 2025-03-24 01:00:52,394 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t --version
01:00:52 2025-03-24 01:00:52,956 [omego.extern] INFO Completed [0.562 s]
01:00:52 2025-03-24 01:00:52,957 [ omego.db] DEBUG stdout: b'psql (PostgreSQL) 16.4\n'
01:00:52 2025-03-24 01:00:52,957 [ omego.db] INFO psql version: psql (PostgreSQL) 16.4
01:00:52
01:00:52 2025-03-24 01:00:52,957 [omego.extern] INFO Running [current environment]: omero config get --show-password
01:00:52 2025-03-24 01:00:52,957 [omego.extern] INFO Executing : omero config get --show-password
01:00:54 2025-03-24 01:00:54,389 [omego.extern] INFO Completed [1.433 s]
01:00:54 2025-03-24 01:00:54,390 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
01:00:54 2025-03-24 01:00:54,390 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c \conninfo
01:00:54 2025-03-24 01:00:54,559 [omego.extern] INFO Completed [0.169 s]
01:00:54 2025-03-24 01:00:54,559 [ omego.db] DEBUG stdout: b'You are connected to database "OMERO-server" as user "postgres" on host "pg" (address "172.18.0.4") at port "5432".\n'
01:00:54 2025-03-24 01:00:54,559 [ omego.db] DEBUG Executing query: SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
01:00:54 2025-03-24 01:00:54,559 [omego.extern] INFO Running [current environment]: omero config get --show-password
01:00:54 2025-03-24 01:00:54,559 [omego.extern] INFO Executing : omero config get --show-password
01:00:55 2025-03-24 01:00:55,935 [omego.extern] INFO Completed [1.376 s]
01:00:55 2025-03-24 01:00:55,936 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
01:00:55 2025-03-24 01:00:55,936 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
01:00:56 2025-03-24 01:00:56,264 [omego.extern] INFO Completed [0.328 s]
01:00:56 2025-03-24 01:00:56,264 [ omego.db] DEBUG stdout: b'OMERO5.4|0\n'
01:00:56 2025-03-24 01:00:56,264 [ omego.db] INFO Current omero db version: ('OMERO5.4', '0')
01:00:56 2025-03-24 01:00:56,266 [ omego.db] INFO Database is already at OMERO5.4__0
01:00:56 + export LANG=en_US.UTF-8
01:00:56 + LANG=en_US.UTF-8
01:00:56 + export LANGUAGE=en_US:en
01:00:56 + LANGUAGE=en_US:en
01:00:56 + export LC_ALL=en_US.UTF-8
01:00:56 + LC_ALL=en_US.UTF-8
01:00:56 + BUILD_ID=DONT_KILL_ME
01:00:56 + omero admin start
01:01:06 No descriptor given. Using etc/grid/default.xml
01:01:17 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/master
01:01:17 Initializing /home/omero/workspace/OMERO-server/OMERO.server/var/log
01:01:17 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/registry
01:01:17 Waiting on startup. Use CTRL-C to exit
01:01:17 + omero admin waitup
01:01:19 Waiting on startup. Use CTRL-C to exit
01:01:19 + omero admin diagnostics
01:01:21
01:01:21 ================================================================================
01:01:21 OMERO Diagnostics (admin)
01:01:21 ================================================================================
01:01:21
01:01:21 Commands: java -version 11.0.24 (/usr/bin/java)
01:01:21 Commands: python -V 3.9.18 (/home/omero/workspace/OMERO-server/.venv3/bin/python)
01:01:21 Commands: icegridnode --version 3.6.5 (/opt/ice-3.6.5/bin/icegridnode)
01:01:21 Commands: icegridadmin --version 3.6.5 (/opt/ice-3.6.5/bin/icegridadmin)
01:01:22 Commands: psql --version 16.4 (/usr/bin/psql)
01:01:22 Commands: openssl version 3.0.71 (/usr/bin/openssl)
01:01:22
01:01:22 Component: OMERO.py 5.19.7.dev0
01:01:22 Component: OMERO.server 5.6.3-548-bf8a6734d5-ice36
01:01:22
01:01:22 Server: icegridnode running
01:01:22 Server: Blitz-0 active (pid = 16251, enabled)
01:01:22 Server: Indexer-0 activating (enabled)
01:01:22 Server: OMERO.Glacier2 active (pid = 16278, enabled)
01:01:22 Server: OMERO.IceStorm active (pid = 16285, enabled)
01:01:22 Server: Processor-0 active (pid = 16301, enabled)
01:01:22 Server: Tables-0 active (pid = 16316, enabled)
01:01:22
01:01:22 Log dir: /home/omero/workspace/OMERO-server/OMERO.server/var/log exists
01:01:22 Log files: Blitz-0.log 32.9 KB errors=0 warnings=1
01:01:22 Log files: DropBox.log n/a
01:01:22 Log files: FileServer.log n/a
01:01:22 Log files: Indexer-0.log 478 B
01:01:22 Log files: MonitorServer.log n/a
01:01:22 Log files: Processor-0.log 735 B
01:01:22 Log files: Tables-0.log 961 B
01:01:22 Log files: TestDropBox.log n/a
01:01:22 Log files: master.err 24.9 KB
01:01:22 Log files: master.out 30.5 KB
01:01:22 Log files: Total size 0.09 MB
01:01:22
01:01:22
01:01:22 Environment:OMERO_HOME=(unset)
01:01:22 Environment:OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
01:01:22 Environment:OMERO_NODE=(unset)
01:01:22 Environment:OMERO_MASTER=(unset)
01:01:22 Environment:OMERO_USERDIR=(unset)
01:01:22 Environment:OMERO_TMPDIR=(unset)
01:01:22 Environment:PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:01:22 Environment:PYTHONPATH=(unset)
01:01:22 Environment:ICE_HOME=/opt/ice-3.6.5
01:01:22 Environment:LD_LIBRARY_PATH=(unset)
01:01:22 Environment:DYLD_LIBRARY_PATH=(unset)
01:01:22
01:01:22 OMERO SSL port:4064
01:01:22 OMERO TCP port:4063
01:01:22 OMERO data dir:'/home/omero/omero-server-data' Exists? True Is writable? True
01:01:22 OMERO temp dir:'/home/omero/omero/tmp' Exists? True Is writable? True (Size: 0)
01:01:22
01:01:22 JVM settings: Blitz-${index} -Xmx7200m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions
01:01:22 JVM settings: Indexer-${index} -Xmx4800m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions
01:01:22 JVM settings: PixelData-${index} -Xmx7200m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions
01:01:22 JVM settings: Repository-${index} -Xmx4800m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions
01:01:22
01:01:22 Jar: lib/server/formats-api.jar Bio-Formats API 8.2.0-SNAPSHOT 24 March 2025 9e0a39ae6d330017c9af71e1ad0f318df9487160
01:01:22 Jar: lib/server/formats-bsd.jar BSD Bio-Formats readers and writers 8.2.0-SNAPSHOT 24 March 2025 9e0a39ae6d330017c9af71e1ad0f318df9487160
01:01:22 Jar: lib/server/formats-gpl.jar Bio-Formats library 8.2.0-SNAPSHOT 24 March 2025 9e0a39ae6d330017c9af71e1ad0f318df9487160
01:01:22 Jar: lib/server/ome-codecs.jar OME Codecs 1.1.1-SNAPSHOT 24 March 2025 aa77f4df8ce11567350a5520ef13d995d7d79adc
01:01:22 Jar: lib/server/ome-common.jar OME Common Java 6.0.26-SNAPSHOT 24 March 2025 aa77f4df8ce11567350a5520ef13d995d7d79adc
01:01:22 Jar: lib/server/ome-jai.jar OME JAI 0.1.5-SNAPSHOT 24 March 2025 aa77f4df8ce11567350a5520ef13d995d7d79adc
01:01:22 Jar: lib/server/ome-mdbtools.jar MDB Tools (Java port) 5.3.4-SNAPSHOT 24 March 2025 aa77f4df8ce11567350a5520ef13d995d7d79adc
01:01:22 Jar: lib/server/ome-poi.jar OME POI 5.3.10-SNAPSHOT 24 March 2025 aa77f4df8ce11567350a5520ef13d995d7d79adc
01:01:22 Jar: lib/server/ome-xml.jar OME XML library 6.5.0-SNAPSHOT 24 March 2025 aa77f4df8ce11567350a5520ef13d995d7d79adc
01:01:22 Jar: lib/server/omero-blitz.jar jar 5.8.2-SNAPSHOT
01:01:22 Jar: lib/server/omero-common.jar jar 5.7.2-SNAPSHOT
01:01:22 Jar: lib/server/omero-gateway.jar jar 5.10.2-SNAPSHOT
01:01:22 Jar: lib/server/omero-model.jar jar 5.7.2-SNAPSHOT
01:01:22 Jar: lib/server/omero-renderer.jar jar 5.6.2-SNAPSHOT
01:01:22 Jar: lib/server/omero-romio.jar jar 5.8.2-SNAPSHOT
01:01:22 Jar: lib/server/omero-server.jar jar 5.7.2-SNAPSHOT
01:01:22 + deactivate
01:01:22 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
01:01:22 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:01:22 + export PATH
01:01:22 + unset _OLD_VIRTUAL_PATH
01:01:22 + '[' -n '' ']'
01:01:22 + '[' -n /bin/bash -o -n '' ']'
01:01:22 + hash -r
01:01:22 + '[' -n '' ']'
01:01:22 + unset VIRTUAL_ENV
01:01:22 + '[' '!' '' = nondestructive ']'
01:01:22 + unset -f deactivate
01:01:22 Finished: SUCCESS
![[Jenkins]](/jenkins/static/3d58bc78/images/svgs/logo.svg){kind=logo}
