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#14 319.3 Progress (2): 0.7/6.0 MB | 61/338 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/commons-math/commons-math/1.2/commons-math-1.2.jar (338 kB at 1.9 MB/s)
#14 319.4 Progress (1): 1.6/6.0 MB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/xerial/sqlite-jdbc/3.28.0/sqlite-jdbc-3.28.0.jar (6.0 MB at 16 MB/s)
#14 319.6 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#14 319.6 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#14 319.9 Progress (1): 0/4.3 MB
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Downloaded from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (80 kB at 100 kB/s)
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Downloaded from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (4.3 MB at 1.5 MB/s)
#14 322.5 [INFO] 
#14 322.5 [INFO] --- maven-clean-plugin:3.1.0:clean (default-clean) @ formats-gpl ---
#14 322.5 [INFO] 
#14 322.5 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ formats-gpl ---
#14 322.5 [INFO] 
#14 322.5 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ formats-gpl ---
#14 322.5 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 322.5 [INFO] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 322.5 [INFO] Storing buildNumber: 57e8057b61b1e139eb51cf294c39fa9d23a12d1b at timestamp: 1742343894212
#14 322.5 [WARNING] Cannot get the branch information from the git repository: 
#14 322.5 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 322.5 
#14 322.5 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 322.5 [INFO] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 322.5 [INFO] Storing buildScmBranch: UNKNOWN
#14 322.5 [INFO] 
#14 322.5 [INFO] --- maven-resources-plugin:3.1.0:resources (default-resources) @ formats-gpl ---
#14 322.5 [INFO] Using 'UTF-8' encoding to copy filtered resources.
#14 322.5 [INFO] Copying 2 resources
#14 322.5 [INFO] skip non existing resourceDirectory /bio-formats-build/bioformats/components/formats-gpl/lib
#14 322.5 [INFO] Copying 0 resource
#14 322.5 [INFO] Copying 0 resource
#14 322.5 [INFO] 
#14 322.5 [INFO] --- maven-compiler-plugin:3.7.0:compile (default-compile) @ formats-gpl ---
#14 322.6 [INFO] Changes detected - recompiling the module!
#14 322.6 [INFO] Compiling 175 source files to /bio-formats-build/bioformats/components/formats-gpl/target/classes
#14 324.7 [INFO] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Some input files use or override a deprecated API.
#14 324.7 [INFO] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Recompile with -Xlint:deprecation for details.
#14 324.7 [INFO] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Some input files use unchecked or unsafe operations.
#14 324.7 [INFO] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Recompile with -Xlint:unchecked for details.
#14 324.7 [INFO] 
#14 324.7 [INFO] --- maven-resources-plugin:3.1.0:testResources (default-testResources) @ formats-gpl ---
#14 324.7 [INFO] Using 'UTF-8' encoding to copy filtered resources.
#14 324.7 [INFO] Copying 24 resources
#14 324.8 [INFO] 
#14 324.8 [INFO] --- maven-compiler-plugin:3.7.0:testCompile (default-testCompile) @ formats-gpl ---
#14 324.8 [INFO] Changes detected - recompiling the module!
#14 324.8 [INFO] Compiling 23 source files to /bio-formats-build/bioformats/components/formats-gpl/target/test-classes
#14 325.0 [INFO] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java uses unchecked or unsafe operations.
#14 325.0 [INFO] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: Recompile with -Xlint:unchecked for details.
#14 325.0 [INFO] 
#14 325.0 [INFO] --- maven-surefire-plugin:2.22.0:test (default-test) @ formats-gpl ---
#14 325.0 [INFO] 
#14 325.0 [INFO] -------------------------------------------------------
#14 325.0 [INFO]  T E S T S
#14 325.0 [INFO] -------------------------------------------------------
#14 325.1 [INFO] Running TestSuite
#14 326.3 2025-03-19 00:24:57,998 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@232024b9 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 326.3 2025-03-19 00:24:58,001 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@6c2f1700 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 326.4 2025-03-19 00:24:58,053 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@4c9e9fb8 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 326.4 2025-03-19 00:24:58,054 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@9ec531 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 326.4 2025-03-19 00:24:58,103 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@29006752 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 326.4 2025-03-19 00:24:58,103 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@534243e4 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 326.4 2025-03-19 00:24:58,149 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@155d1021 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 326.4 2025-03-19 00:24:58,150 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@4bd2f0dc reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 326.5 2025-03-19 00:24:58,194 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@3e6f3bae reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 326.5 2025-03-19 00:24:58,194 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@7a94b64e reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 326.6 2025-03-19 00:24:58,253 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@72ba28ee reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 326.6 2025-03-19 00:24:58,253 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@3e134896 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 326.6 2025-03-19 00:24:58,297 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@59942b48 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 326.6 2025-03-19 00:24:58,297 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@1869f114 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 326.6 2025-03-19 00:24:58,336 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@3bcd426c reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 326.6 2025-03-19 00:24:58,337 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@5f14a673 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 326.9 [INFO] Tests run: 99, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.738 s - in TestSuite
#14 327.2 [INFO] 
#14 327.2 [INFO] Results:
#14 327.2 [INFO] 
#14 327.2 [INFO] Tests run: 99, Failures: 0, Errors: 0, Skipped: 0
#14 327.2 [INFO] 
#14 327.2 [INFO] 
#14 327.2 [INFO] --- maven-surefire-plugin:2.22.0:test (missing-mdb-test) @ formats-gpl ---
#14 327.2 [INFO] 
#14 327.2 [INFO] -------------------------------------------------------
#14 327.2 [INFO]  T E S T S
#14 327.2 [INFO] -------------------------------------------------------
#14 327.4 [INFO] Running TestSuite
#14 327.8 [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.424 s - in TestSuite
#14 328.1 [INFO] 
#14 328.1 [INFO] Results:
#14 328.1 [INFO] 
#14 328.1 [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0
#14 328.1 [INFO] 
#14 328.1 [INFO] 
#14 328.1 [INFO] --- maven-surefire-plugin:2.22.0:test (missing-poi-test) @ formats-gpl ---
#14 328.1 [INFO] 
#14 328.1 [INFO] -------------------------------------------------------
#14 328.1 [INFO]  T E S T S
#14 328.1 [INFO] -------------------------------------------------------
#14 328.3 [INFO] Running TestSuite
#14 328.7 [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.408 s - in TestSuite
#14 329.0 [INFO] 
#14 329.0 [INFO] Results:
#14 329.0 [INFO] 
#14 329.0 [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0
#14 329.0 [INFO] 
#14 329.0 [INFO] 
#14 329.0 [INFO] --- maven-surefire-plugin:2.22.0:test (missing-netcdf-test) @ formats-gpl ---
#14 329.0 [INFO] 
#14 329.0 [INFO] -------------------------------------------------------
#14 329.0 [INFO]  T E S T S
#14 329.0 [INFO] -------------------------------------------------------
#14 329.2 [INFO] Running TestSuite
#14 329.6 [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.406 s - in TestSuite
#14 329.9 [INFO] 
#14 329.9 [INFO] Results:
#14 329.9 [INFO] 
#14 329.9 [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0
#14 329.9 [INFO] 
#14 329.9 [INFO] 
#14 329.9 [INFO] --- maven-jar-plugin:3.1.0:jar (default-jar) @ formats-gpl ---
#14 330.0 [INFO] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT.jar
#14 330.0 [INFO] 
#14 330.0 [INFO] >>> maven-source-plugin:3.0.1:jar (default) > generate-sources @ formats-gpl >>>
#14 330.0 [INFO] 
#14 330.0 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ formats-gpl ---
#14 330.0 [INFO] 
#14 330.0 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ formats-gpl ---
#14 330.0 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 330.0 [INFO] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 330.0 [INFO] Storing buildNumber: 57e8057b61b1e139eb51cf294c39fa9d23a12d1b at timestamp: 1742343901686
#14 330.0 [WARNING] Cannot get the branch information from the git repository: 
#14 330.0 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 330.0 
#14 330.0 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 330.0 [INFO] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 330.0 [INFO] Storing buildScmBranch: UNKNOWN
#14 330.0 [INFO] 
#14 330.0 [INFO] <<< maven-source-plugin:3.0.1:jar (default) < generate-sources @ formats-gpl <<<
#14 330.0 [INFO] 
#14 330.0 [INFO] 
#14 330.0 [INFO] --- maven-source-plugin:3.0.1:jar (default) @ formats-gpl ---
#14 330.0 [INFO] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-sources.jar
#14 330.1 [INFO] 
#14 330.1 [INFO] --- maven-jar-plugin:3.1.0:test-jar (default) @ formats-gpl ---
#14 330.1 [INFO] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-tests.jar
#14 330.1 [INFO] 
#14 330.1 [INFO] --- maven-install-plugin:2.5.2:install (default-install) @ formats-gpl ---
#14 330.1 [INFO] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#14 330.1 [INFO] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#14 330.1 [INFO] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT-sources.jar
#14 330.1 [INFO] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT-tests.jar
#14 330.1 [INFO] 
#14 330.1 [INFO] ----------------------< ome:bio-formats_plugins >-----------------------
#14 330.1 [INFO] Building Bio-Formats Plugins for ImageJ 8.2.0-SNAPSHOT           [17/24]
#14 330.1 [INFO] --------------------------------[ jar ]---------------------------------
#14 330.1 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom
#14 330.2 Progress (1): 4.1/7.9 kB
Progress (1): 7.9 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom (7.9 kB at 77 kB/s)
#14 330.2 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar
#14 330.2 Progress (1): 0/2.5 MB
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Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar (2.5 MB at 20 MB/s)
#14 330.4 [INFO] 
#14 330.4 [INFO] --- maven-clean-plugin:3.1.0:clean (default-clean) @ bio-formats_plugins ---
#14 330.4 [INFO] 
#14 330.4 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ bio-formats_plugins ---
#14 330.4 [INFO] 
#14 330.4 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ bio-formats_plugins ---
#14 330.4 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 330.4 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 330.4 [INFO] Storing buildNumber: 57e8057b61b1e139eb51cf294c39fa9d23a12d1b at timestamp: 1742343902056
#14 330.4 [WARNING] Cannot get the branch information from the git repository: 
#14 330.4 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 330.4 
#14 330.4 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 330.4 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 330.4 [INFO] Storing buildScmBranch: UNKNOWN
#14 330.4 [INFO] 
#14 330.4 [INFO] --- maven-resources-plugin:3.1.0:resources (default-resources) @ bio-formats_plugins ---
#14 330.4 [INFO] Using 'UTF-8' encoding to copy filtered resources.
#14 330.4 [INFO] Copying 3 resources
#14 330.4 [INFO] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-plugins/lib
#14 330.4 [INFO] Copying 0 resource
#14 330.4 [INFO] Copying 0 resource
#14 330.4 [INFO] 
#14 330.4 [INFO] --- maven-compiler-plugin:3.7.0:compile (default-compile) @ bio-formats_plugins ---
#14 330.4 [INFO] Changes detected - recompiling the module!
#14 330.4 [INFO] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/classes
#14 330.8 [INFO] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Some input files use or override a deprecated API.
#14 330.8 [INFO] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Recompile with -Xlint:deprecation for details.
#14 330.8 [INFO] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#14 330.8 [INFO] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: Recompile with -Xlint:unchecked for details.
#14 330.8 [INFO] 
#14 330.8 [INFO] --- maven-resources-plugin:3.1.0:testResources (default-testResources) @ bio-formats_plugins ---
#14 330.8 [INFO] Using 'UTF-8' encoding to copy filtered resources.
#14 330.8 [INFO] Copying 1 resource
#14 330.8 [INFO] 
#14 330.8 [INFO] --- maven-compiler-plugin:3.7.0:testCompile (default-testCompile) @ bio-formats_plugins ---
#14 330.8 [INFO] Changes detected - recompiling the module!
#14 330.8 [INFO] Compiling 3 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/test-classes
#14 331.0 [INFO] 
#14 331.0 [INFO] --- maven-surefire-plugin:2.22.0:test (default-test) @ bio-formats_plugins ---
#14 331.0 [INFO] 
#14 331.0 [INFO] -------------------------------------------------------
#14 331.0 [INFO]  T E S T S
#14 331.0 [INFO] -------------------------------------------------------
#14 331.2 [INFO] Running TestSuite
#14 332.4 Warning: Data has too many channels for Colorized color mode
#14 332.4 Warning: Data has too many channels for Colorized color mode
#14 332.5 Warning: Data has too many channels for Colorized color mode
#14 332.5 Warning: Data has too many channels for Colorized color mode
#14 332.6 Warning: Data has too many channels for Colorized color mode
#14 332.6 Warning: Data has too many channels for Colorized color mode
#14 332.6 Warning: Data has too many channels for Colorized color mode
#14 332.7 Warning: Data has too many channels for Colorized color mode
#14 332.7 Warning: Data has too many channels for Composite color mode
#14 332.8 Warning: Data has too many channels for Composite color mode
#14 333.1 Warning: Data has too many channels for Composite color mode
#14 333.1 Warning: Data has too many channels for Composite color mode
#14 333.1 Warning: Data has too many channels for Composite color mode
#14 333.1 Warning: Data has too many channels for Composite color mode
#14 333.1 Warning: Data has too many channels for Composite color mode
#14 333.1 Warning: Data has too many channels for Composite color mode
#14 333.1 Warning: Data has too many channels for Composite color mode
#14 333.1 Warning: Data has too many channels for Composite color mode
#14 333.2 Warning: Data has too many channels for Composite color mode
#14 333.2 Warning: Data has too many channels for Composite color mode
#14 333.2 Warning: Data has too many channels for Composite color mode
#14 333.2 Warning: Data has too many channels for Composite color mode
#14 333.2 Warning: Data has too many channels for Composite color mode
#14 333.2 Warning: Data has too many channels for Composite color mode
#14 333.2 Warning: Data has too many channels for Composite color mode
#14 333.2 Warning: Data has too many channels for Composite color mode
#14 333.5 Warning: Data has too many channels for Composite color mode
#14 333.5 Warning: Data has too many channels for Composite color mode
#14 333.5 Warning: Data has too many channels for Composite color mode
#14 333.5 Warning: Data has too many channels for Composite color mode
#14 333.5 Warning: Data has too many channels for Composite color mode
#14 333.6 Warning: Data has too many channels for Composite color mode
#14 333.6 Warning: Data has too many channels for Composite color mode
#14 333.6 Warning: Data has too many channels for Composite color mode
#14 333.6 Warning: Data has too many channels for Composite color mode
#14 333.6 Warning: Data has too many channels for Composite color mode
#14 333.6 Warning: Data has too many channels for Composite color mode
#14 333.6 Warning: Data has too many channels for Composite color mode
#14 333.6 Warning: Data has too many channels for Composite color mode
#14 333.6 Warning: Data has too many channels for Composite color mode
#14 333.6 Warning: Data has too many channels for Composite color mode
#14 333.6 Warning: Data has too many channels for Composite color mode
#14 333.7 Warning: Data has too many channels for Composite color mode
#14 333.7 Warning: Data has too many channels for Composite color mode
#14 334.0 Warning: Data has too many channels for Composite color mode
#14 334.0 Warning: Data has too many channels for Composite color mode
#14 334.0 Warning: Data has too many channels for Composite color mode
#14 334.1 Warning: Data has too many channels for Composite color mode
#14 334.1 Warning: Data has too many channels for Composite color mode
#14 334.1 Warning: Data has too many channels for Composite color mode
#14 334.1 Warning: Data has too many channels for Composite color mode
#14 334.1 Warning: Data has too many channels for Composite color mode
#14 334.1 Warning: Data has too many channels for Composite color mode
#14 334.1 Warning: Data has too many channels for Composite color mode
#14 334.1 Warning: Data has too many channels for Composite color mode
#14 334.1 Warning: Data has too many channels for Composite color mode
#14 334.1 Warning: Data has too many channels for Composite color mode
#14 334.2 Warning: Data has too many channels for Composite color mode
#14 334.2 Warning: Data has too many channels for Composite color mode
#14 334.2 Warning: Data has too many channels for Composite color mode
#14 334.5 Warning: Data has too many channels for Composite color mode
#14 334.5 Warning: Data has too many channels for Composite color mode
#14 334.5 Warning: Data has too many channels for Composite color mode
#14 334.5 Warning: Data has too many channels for Composite color mode
#14 334.5 Warning: Data has too many channels for Composite color mode
#14 334.6 Warning: Data has too many channels for Composite color mode
#14 334.6 Warning: Data has too many channels for Composite color mode
#14 334.6 Warning: Data has too many channels for Composite color mode
#14 334.6 Warning: Data has too many channels for Composite color mode
#14 334.6 Warning: Data has too many channels for Composite color mode
#14 334.6 Warning: Data has too many channels for Composite color mode
#14 334.6 Warning: Data has too many channels for Composite color mode
#14 334.6 Warning: Data has too many channels for Composite color mode
#14 334.6 Warning: Data has too many channels for Composite color mode
#14 334.7 Warning: Data has too many channels for Composite color mode
#14 334.7 Warning: Data has too many channels for Composite color mode
#14 334.7 Warning: Data has too many channels for Custom color mode
#14 334.7 Warning: Data has too many channels for Custom color mode
#14 334.7 Warning: Data has too many channels for Custom color mode
#14 334.8 Warning: Data has too many channels for Custom color mode
#14 334.8 Warning: Data has too many channels for Custom color mode
#14 334.8 Warning: Data has too many channels for Custom color mode
#14 334.8 Warning: Data has too many channels for Custom color mode
#14 334.9 Warning: Data has too many channels for Custom color mode
#14 334.9 Warning: Data has too many channels for Default color mode
#14 334.9 Warning: Data has too many channels for Default color mode
#14 334.9 Warning: Data has too many channels for Default color mode
#14 334.9 Warning: Data has too many channels for Default color mode
#14 335.0 Warning: Data has too many channels for Default color mode
#14 335.0 Warning: Data has too many channels for Default color mode
#14 335.0 Warning: Data has too many channels for Default color mode
#14 335.0 Warning: Data has too many channels for Default color mode
#14 335.1 Warning: Data has too many channels for Default color mode
#14 335.1 Warning: Data has too many channels for Default color mode
#14 335.1 Warning: Data has too many channels for Default color mode
#14 335.1 Warning: Data has too many channels for Default color mode
#14 335.2 Warning: Data has too many channels for Default color mode
#14 335.2 Warning: Data has too many channels for Default color mode
#14 335.2 Warning: Data has too many channels for Default color mode
#14 335.2 Warning: Data has too many channels for Default color mode
#14 335.3 Warning: Data has too many channels for Grayscale color mode
#14 335.3 Warning: Data has too many channels for Grayscale color mode
#14 335.3 Warning: Data has too many channels for Grayscale color mode
#14 335.3 Warning: Data has too many channels for Grayscale color mode
#14 335.3 Warning: Data has too many channels for Grayscale color mode
#14 335.4 Warning: Data has too many channels for Grayscale color mode
#14 335.4 Warning: Data has too many channels for Grayscale color mode
#14 335.4 Warning: Data has too many channels for Grayscale color mode
#14 335.5 Warning: Data has too many channels for Colorized color mode
#14 335.5 Warning: Data has too many channels for Colorized color mode
#14 335.5 Warning: Data has too many channels for Colorized color mode
#14 336.1 Warning: Data has too many channels for Default color mode
#14 336.3 [INFO] Tests run: 30, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 5.123 s - in TestSuite
#14 336.6 [INFO] 
#14 336.6 [INFO] Results:
#14 336.6 [INFO] 
#14 336.6 [INFO] Tests run: 30, Failures: 0, Errors: 0, Skipped: 0
#14 336.6 [INFO] 
#14 336.6 [INFO] 
#14 336.6 [INFO] --- maven-jar-plugin:3.1.0:jar (default-jar) @ bio-formats_plugins ---
#14 336.6 [INFO] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#14 336.6 [INFO] 
#14 336.6 [INFO] >>> maven-source-plugin:3.0.1:jar (default) > generate-sources @ bio-formats_plugins >>>
#14 336.6 [INFO] 
#14 336.6 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ bio-formats_plugins ---
#14 336.6 [INFO] 
#14 336.6 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ bio-formats_plugins ---
#14 336.6 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 336.6 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 336.6 [INFO] Storing buildNumber: 57e8057b61b1e139eb51cf294c39fa9d23a12d1b at timestamp: 1742343908345
#14 336.7 [WARNING] Cannot get the branch information from the git repository: 
#14 336.7 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 336.7 
#14 336.7 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 336.7 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 336.7 [INFO] Storing buildScmBranch: UNKNOWN
#14 336.7 [INFO] 
#14 336.7 [INFO] <<< maven-source-plugin:3.0.1:jar (default) < generate-sources @ bio-formats_plugins <<<
#14 336.7 [INFO] 
#14 336.7 [INFO] 
#14 336.7 [INFO] --- maven-source-plugin:3.0.1:jar (default) @ bio-formats_plugins ---
#14 336.7 [INFO] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar
#14 336.7 [INFO] 
#14 336.7 [INFO] --- maven-jar-plugin:3.1.0:test-jar (default) @ bio-formats_plugins ---
#14 336.7 [INFO] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar
#14 336.7 [INFO] 
#14 336.7 [INFO] --- maven-install-plugin:2.5.2:install (default-install) @ bio-formats_plugins ---
#14 336.7 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#14 336.7 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#14 336.7 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar
#14 336.7 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar
#14 336.7 [INFO] 
#14 336.7 [INFO] -----------------------< ome:bio-formats-tools >------------------------
#14 336.7 [INFO] Building Bio-Formats command line tools 8.2.0-SNAPSHOT           [18/24]
#14 336.7 [INFO] --------------------------------[ jar ]---------------------------------
#14 336.7 [INFO] 
#14 336.7 [INFO] --- maven-clean-plugin:3.1.0:clean (default-clean) @ bio-formats-tools ---
#14 336.7 [INFO] 
#14 336.7 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ bio-formats-tools ---
#14 336.7 [INFO] 
#14 336.7 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ bio-formats-tools ---
#14 336.7 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 336.7 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 336.7 [INFO] Storing buildNumber: 57e8057b61b1e139eb51cf294c39fa9d23a12d1b at timestamp: 1742343908431
#14 336.7 [WARNING] Cannot get the branch information from the git repository: 
#14 336.7 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 336.7 
#14 336.7 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 336.7 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 336.7 [INFO] Storing buildScmBranch: UNKNOWN
#14 336.7 [INFO] 
#14 336.7 [INFO] --- maven-resources-plugin:3.1.0:resources (default-resources) @ bio-formats-tools ---
#14 336.7 [INFO] Using 'UTF-8' encoding to copy filtered resources.
#14 336.7 [INFO] Copying 0 resource
#14 336.7 [INFO] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-tools/lib
#14 336.7 [INFO] Copying 0 resource
#14 336.7 [INFO] Copying 0 resource
#14 336.7 [INFO] 
#14 336.7 [INFO] --- maven-compiler-plugin:3.7.0:compile (default-compile) @ bio-formats-tools ---
#14 336.7 [INFO] Changes detected - recompiling the module!
#14 336.7 [INFO] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/target/classes
#14 336.9 [INFO] 
#14 336.9 [INFO] --- maven-resources-plugin:3.1.0:testResources (default-testResources) @ bio-formats-tools ---
#14 336.9 [INFO] Using 'UTF-8' encoding to copy filtered resources.
#14 336.9 [INFO] Copying 1 resource
#14 336.9 [INFO] 
#14 336.9 [INFO] --- maven-compiler-plugin:3.7.0:testCompile (default-testCompile) @ bio-formats-tools ---
#14 336.9 [INFO] Changes detected - recompiling the module!
#14 336.9 [INFO] Compiling 1 source file to /bio-formats-build/bioformats/components/bio-formats-tools/target/test-classes
#14 337.0 [INFO] 
#14 337.0 [INFO] --- maven-surefire-plugin:2.22.0:test (default-test) @ bio-formats-tools ---
#14 337.0 [INFO] 
#14 337.0 [INFO] -------------------------------------------------------
#14 337.0 [INFO]  T E S T S
#14 337.0 [INFO] -------------------------------------------------------
#14 337.2 [INFO] Running loci.formats.tools.ImageConverterTest
#14 424.2 [INFO] Tests run: 55, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 86.998 s - in loci.formats.tools.ImageConverterTest
#14 424.6 [INFO] 
#14 424.6 [INFO] Results:
#14 424.6 [INFO] 
#14 424.6 [INFO] Tests run: 55, Failures: 0, Errors: 0, Skipped: 0
#14 424.6 [INFO] 
#14 424.6 [INFO] 
#14 424.6 [INFO] --- maven-jar-plugin:3.1.0:jar (default-jar) @ bio-formats-tools ---
#14 424.6 [INFO] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT.jar
#14 424.6 [INFO] 
#14 424.6 [INFO] >>> maven-source-plugin:3.0.1:jar (default) > generate-sources @ bio-formats-tools >>>
#14 424.6 [INFO] 
#14 424.6 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ bio-formats-tools ---
#14 424.6 [INFO] 
#14 424.6 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ bio-formats-tools ---
#14 424.6 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 424.6 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 424.6 [INFO] Storing buildNumber: 57e8057b61b1e139eb51cf294c39fa9d23a12d1b at timestamp: 1742343996282
#14 424.6 [WARNING] Cannot get the branch information from the git repository: 
#14 424.6 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 424.6 
#14 424.6 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 424.6 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 424.6 [INFO] Storing buildScmBranch: UNKNOWN
#14 424.6 [INFO] 
#14 424.6 [INFO] <<< maven-source-plugin:3.0.1:jar (default) < generate-sources @ bio-formats-tools <<<
#14 424.6 [INFO] 
#14 424.6 [INFO] 
#14 424.6 [INFO] --- maven-source-plugin:3.0.1:jar (default) @ bio-formats-tools ---
#14 424.6 [INFO] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-sources.jar
#14 424.6 [INFO] 
#14 424.6 [INFO] --- maven-jar-plugin:3.1.0:test-jar (default) @ bio-formats-tools ---
#14 424.6 [INFO] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-tests.jar
#14 424.6 [INFO] 
#14 424.6 [INFO] --- maven-install-plugin:2.5.2:install (default-install) @ bio-formats-tools ---
#14 424.6 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#14 424.6 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#14 424.6 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT-sources.jar
#14 424.6 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT-tests.jar
#14 424.6 [INFO] 
#14 424.6 [INFO] -----------------------< ome:bioformats_package >-----------------------
#14 424.6 [INFO] Building bioformats_package bundle 8.2.0-SNAPSHOT                [19/24]
#14 424.6 [INFO] --------------------------------[ pom ]---------------------------------
#14 424.6 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.pom
#14 424.6 Progress (1): 4.1/16 kB
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Progress (1): 16 kB   
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.pom (16 kB at 535 kB/s)
#14 424.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.jar
#14 424.7 Progress (1): 4.1/241 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.jar (241 kB at 7.5 MB/s)
#14 424.7 [INFO] 
#14 424.7 [INFO] --- maven-clean-plugin:3.1.0:clean (default-clean) @ bioformats_package ---
#14 424.7 [INFO] 
#14 424.7 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ bioformats_package ---
#14 424.7 [INFO] 
#14 424.7 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ bioformats_package ---
#14 424.7 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 424.7 [INFO] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 424.7 [INFO] Storing buildNumber: 57e8057b61b1e139eb51cf294c39fa9d23a12d1b at timestamp: 1742343996402
#14 424.7 [WARNING] Cannot get the branch information from the git repository: 
#14 424.7 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 424.7 
#14 424.7 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 424.7 [INFO] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 424.7 [INFO] Storing buildScmBranch: UNKNOWN
#14 424.7 [INFO] 
#14 424.7 [INFO] >>> maven-source-plugin:3.0.1:jar (default) > generate-sources @ bioformats_package >>>
#14 424.7 [INFO] 
#14 424.7 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ bioformats_package ---
#14 424.7 [INFO] 
#14 424.7 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ bioformats_package ---
#14 424.7 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 424.7 [INFO] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 424.7 [INFO] Storing buildNumber: 57e8057b61b1e139eb51cf294c39fa9d23a12d1b at timestamp: 1742343996431
#14 424.7 [WARNING] Cannot get the branch information from the git repository: 
#14 424.7 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 424.7 
#14 424.7 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 424.7 [INFO] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 424.7 [INFO] Storing buildScmBranch: UNKNOWN
#14 424.7 [INFO] 
#14 424.7 [INFO] <<< maven-source-plugin:3.0.1:jar (default) < generate-sources @ bioformats_package <<<
#14 424.7 [INFO] 
#14 424.7 [INFO] 
#14 424.7 [INFO] --- maven-source-plugin:3.0.1:jar (default) @ bioformats_package ---
#14 424.7 [INFO] 
#14 424.7 [INFO] --- maven-assembly-plugin:3.1.0:single (make-assembly) @ bioformats_package ---
#14 424.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.pom
#14 424.8 Progress (1): 4.1/7.6 kB
Progress (1): 7.6 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.pom (7.6 kB at 292 kB/s)
#14 424.8 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.jar
#14 424.8 Progress (1): 4.1/123 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.jar (123 kB at 4.2 MB/s)
#14 424.9 [INFO] Reading assembly descriptor: assembly.xml
#14 425.2 [WARNING] The following patterns were never triggered in this artifact exclusion filter:
#14 425.2 o  'gov.nih.imagej:imagej'
#14 425.2 o  'net.imagej:ij'
#14 425.2 o  'org.springframework:spring*'
#14 425.2 o  'aopalliance:aopalliance'
#14 425.2 o  'org.aspectj:aspectj*'
#14 425.2 o  'org.slf4j:slf4j-log4j12'
#14 425.2 o  'log4j:log4j'
#14 425.2 o  'org.testng:testng'
#14 425.2 o  'com.beust:jcommander'
#14 425.2 o  'org.beanshell:bsh'
#14 425.2 o  'edu.princeton.cup:java-cup'
#14 425.2 o  'org.apache.bcel:bcel'
#14 425.2 o  'regexp:regexp'
#14 425.2 o  'org.apache.ant:ant-trax'
#14 425.2 o  'edu.ucar:udunits'
#14 425.2 o  'javax.servlet:servlet-api'
#14 425.2 
#14 425.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/5.1.8/maven-bundle-plugin-5.1.8.pom
#14 425.2 Progress (1): 4.1/11 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/5.1.8/maven-bundle-plugin-5.1.8.pom (11 kB at 414 kB/s)
#14 425.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/felix-parent/7/felix-parent-7.pom
#14 425.2 Progress (1): 4.1/21 kB
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#14 425.3 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.core/6.0.0/org.osgi.core-6.0.0.pom
#14 425.3 Progress (1): 1.1 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.core/6.0.0/org.osgi.core-6.0.0.pom (1.1 kB at 46 kB/s)
#14 425.3 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/biz.aQute.bndlib/6.3.1/biz.aQute.bndlib-6.3.1.pom
#14 425.3 Progress (1): 4.1/5.2 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/biz.aQute.bndlib/6.3.1/biz.aQute.bndlib-6.3.1.pom (5.2 kB at 210 kB/s)
#14 425.3 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.dto/1.0.0/org.osgi.dto-1.0.0.pom
#14 425.3 Progress (1): 1.3 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.dto/1.0.0/org.osgi.dto-1.0.0.pom (1.3 kB at 51 kB/s)
#14 425.3 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.resource/1.0.0/org.osgi.resource-1.0.0.pom
#14 425.4 Progress (1): 1.3 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.resource/1.0.0/org.osgi.resource-1.0.0.pom (1.3 kB at 53 kB/s)
#14 425.4 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.framework/1.8.0/org.osgi.framework-1.8.0.pom
#14 425.4 Progress (1): 1.3 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.framework/1.8.0/org.osgi.framework-1.8.0.pom (1.3 kB at 51 kB/s)
#14 425.4 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.tracker/1.5.4/org.osgi.util.tracker-1.5.4.pom
#14 425.4 Progress (1): 1.9 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.tracker/1.5.4/org.osgi.util.tracker-1.5.4.pom (1.9 kB at 75 kB/s)
#14 425.4 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/osgi.annotation/8.0.1/osgi.annotation-8.0.1.pom
#14 425.4 Progress (1): 1.5 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/osgi.annotation/8.0.1/osgi.annotation-8.0.1.pom (1.5 kB at 59 kB/s)
#14 425.5 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.service.log/1.3.0/org.osgi.service.log-1.3.0.pom
#14 425.5 Progress (1): 1.3 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.service.log/1.3.0/org.osgi.service.log-1.3.0.pom (1.3 kB at 51 kB/s)
#14 425.5 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.service.repository/1.1.0/org.osgi.service.repository-1.1.0.pom
#14 425.5 Progress (1): 1.3 kB
                    
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#14 425.5 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.function/1.2.0/org.osgi.util.function-1.2.0.pom
#14 425.5 Progress (1): 1.7 kB
                    
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#14 425.5 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.promise/1.2.0/org.osgi.util.promise-1.2.0.pom
#14 425.5 Progress (1): 1.9 kB
                    
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#14 425.6 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.function/1.1.0/org.osgi.util.function-1.1.0.pom
#14 425.6 Progress (1): 1.4 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.function/1.1.0/org.osgi.util.function-1.1.0.pom (1.4 kB at 60 kB/s)
#14 425.6 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/biz.aQute.bnd.util/6.3.1/biz.aQute.bnd.util-6.3.1.pom
#14 425.6 Progress (1): 2.7 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/biz.aQute.bnd.util/6.3.1/biz.aQute.bnd.util-6.3.1.pom (2.7 kB at 102 kB/s)
#14 425.6 Downloading from central: https://repo.maven.apache.org/maven2/org/slf4j/slf4j-api/1.7.25/slf4j-api-1.7.25.pom
#14 425.6 Progre
#14 425.6 [output clipped, log limit 2MiB reached]
#14 536.8 SLF4J: No SLF4J providers were found.
#14 536.8 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 536.8 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 DONE 544.1s

#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.0s

#16 [12/13] RUN ant jars tools
#16 0.548 Buildfile: /bio-formats-build/bioformats/build.xml
#16 1.054      [echo] isSnapshot = true
#16 1.164 
#16 1.164 copy-jars:
#16 1.164 
#16 1.164 deps-formats-api:
#16 1.245      [echo] isSnapshot = true
#16 1.305 
#16 1.305 install-pom:
#16 1.475 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/pom-bio-formats-8.2.0-SNAPSHOT.pom
#16 1.682 [resolver:install] Installing ome:pom-bio-formats:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 1.686 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 1.687 
#16 1.687 jar-formats-api:
#16 1.808      [echo] isSnapshot = true
#16 1.959 
#16 1.959 init-title:
#16 1.959      [echo] ----------=========== formats-api ===========----------
#16 1.959 
#16 1.959 init-timestamp:
#16 1.966 
#16 1.966 init:
#16 1.966 
#16 1.966 copy-resources:
#16 1.967     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 1.979      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 1.982 
#16 1.982 compile:
#16 2.165 [resolver:resolve] Resolving artifacts
#16 2.191     [javac] Compiling 53 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.446     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 3.047     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.047     [javac] import loci.common.ReflectedUniverse;
#16 3.047     [javac]                   ^
#16 3.248     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.248     [javac]     int currentIndex = r.getCoreIndex();
#16 3.248     [javac]                         ^
#16 3.248     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.248     [javac]     r.setCoreIndex(coreIndex);
#16 3.248     [javac]      ^
#16 3.248     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.248     [javac]     r.setCoreIndex(currentIndex);
#16 3.248     [javac]      ^
#16 3.449     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.449     [javac]   public void setCoreIndex(int no) {
#16 3.449     [javac]               ^
#16 3.449     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.449     [javac]   public int getCoreIndex() {
#16 3.449     [javac]              ^
#16 3.449     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.449     [javac]   public int coreIndexToSeries(int index)
#16 3.449     [javac]              ^
#16 3.449     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.449     [javac]   public int seriesToCoreIndex(int series)
#16 3.449     [javac]              ^
#16 3.449     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.450     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 3.450     [javac]                             ^
#16 3.550     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.550     [javac]     if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 3.550     [javac]                                              ^
#16 3.550     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.550     [javac]     if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 3.550     [javac]                                              ^
#16 3.550     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.550     [javac]       core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 3.551     [javac]                                                      ^
#16 3.551     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.551     [javac]       core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 3.551     [javac]                                                      ^
#16 3.651     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.651     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 3.651     [javac]     ^
#16 3.651     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.651     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 3.651     [javac]                               ^
#16 3.752     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.752     [javac]   public void setCoreIndex(int no) {
#16 3.752     [javac]               ^
#16 3.752     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.752     [javac]   public int getCoreIndex() {
#16 3.752     [javac]              ^
#16 3.752     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.752     [javac]   public int coreIndexToSeries(int index) {
#16 3.752     [javac]              ^
#16 3.752     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.752     [javac]   public int seriesToCoreIndex(int series) {
#16 3.752     [javac]              ^
#16 3.753     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.753     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 3.753     [javac]                             ^
#16 3.753     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.753     [javac]     return getReader().getCoreMetadataList();
#16 3.753     [javac]                       ^
#16 3.753     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.753     [javac]     return getReader().getCoreIndex();
#16 3.753     [javac]                       ^
#16 3.753     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.753     [javac]     getReader().setCoreIndex(no);
#16 3.754     [javac]                ^
#16 3.754     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.754     [javac]     return getReader().seriesToCoreIndex(series);
#16 3.754     [javac]                       ^
#16 3.754     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.754     [javac]     return getReader().coreIndexToSeries(index);
#16 3.754     [javac]                       ^
#16 3.855     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.855     [javac]   public void setCoreIndex(int no) {
#16 3.855     [javac]               ^
#16 3.855     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.855     [javac]   public int getCoreIndex() {
#16 3.855     [javac]              ^
#16 3.855     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.855     [javac]   public int coreIndexToSeries(int index) {
#16 3.855     [javac]              ^
#16 3.855     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.855     [javac]   public int seriesToCoreIndex(int series) {
#16 3.855     [javac]              ^
#16 3.855     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.855     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 3.855     [javac]                             ^
#16 3.855     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.855     [javac]     List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 3.855     [javac]                                        ^
#16 3.855     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.855     [javac]     return reader.getCoreIndex();
#16 3.855     [javac]                  ^
#16 3.856     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.856     [javac]     reader.setCoreIndex(no);
#16 3.856     [javac]           ^
#16 3.856     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.856     [javac]     return reader.seriesToCoreIndex(series);
#16 3.856     [javac]                  ^
#16 3.856     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.856     [javac]     return reader.coreIndexToSeries(index);
#16 3.856     [javac]                  ^
#16 4.016     [javac] Note: Some input files use unchecked or unsafe operations.
#16 4.016     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 4.017     [javac] 36 warnings
#16 4.017 
#16 4.017 formats-api.jar:
#16 4.017     [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 4.040       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 4.074 [resolver:install] Using default POM (ome:formats-api:8.2.0-SNAPSHOT)
#16 4.077 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.pom
#16 4.180 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.jar
#16 4.182 [resolver:install] Installing ome:formats-api:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 4.184 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 4.184 
#16 4.184 deps-turbojpeg:
#16 4.184 
#16 4.184 jar-turbojpeg:
#16 4.282      [echo] isSnapshot = true
#16 4.432 
#16 4.432 init-title:
#16 4.432      [echo] ----------=========== turbojpeg ===========----------
#16 4.432 
#16 4.432 init-timestamp:
#16 4.433 
#16 4.433 init:
#16 4.433 
#16 4.433 copy-resources:
#16 4.433     [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 4.434 
#16 4.434 compile:
#16 4.444 [resolver:resolve] Resolving artifacts
#16 4.447     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 4.650     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 5.251     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [deprecation] finalize() in Object has been deprecated
#16 5.251     [javac]   protected void finalize() throws Throwable {
#16 5.251     [javac]                  ^
#16 5.251     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [deprecation] finalize() in Object has been deprecated
#16 5.251     [javac]       super.finalize();
#16 5.251     [javac]            ^
#16 5.251     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [deprecation] finalize() in Object has been deprecated
#16 5.251     [javac]   protected void finalize() throws Throwable {
#16 5.251     [javac]                  ^
#16 5.251     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [deprecation] finalize() in Object has been deprecated
#16 5.251     [javac]       super.finalize();
#16 5.251     [javac]            ^
#16 5.298     [javac] 5 warnings
#16 5.298 
#16 5.298 jar:
#16 5.303       [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 5.495 [resolver:install] Using default POM (ome:turbojpeg:8.2.0-SNAPSHOT)
#16 5.503 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.pom
#16 5.568 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar
#16 5.571 [resolver:install] Installing ome:turbojpeg:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 5.574 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 5.575 
#16 5.575 deps-formats-bsd:
#16 5.575 
#16 5.575 jar-formats-bsd:
#16 5.690      [echo] isSnapshot = true
#16 5.839 
#16 5.839 init-title:
#16 5.839      [echo] ----------=========== formats-bsd ===========----------
#16 5.839 
#16 5.839 init-timestamp:
#16 5.839 
#16 5.839 init:
#16 5.839 
#16 5.839 copy-resources:
#16 5.840     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 5.843      [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 5.844 
#16 5.844 compile:
#16 6.054 [resolver:resolve] Resolving artifacts
#16 6.082     [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.291     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 7.392     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 7.392     [javac] import loci.common.ReflectedUniverse;
#16 7.392     [javac]                   ^
#16 7.792     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.792     [javac]       core.size() != reader.getCoreMetadataList().size())
#16 7.792     [javac]                            ^
#16 7.792     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.792     [javac]       List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 7.792     [javac]                                          ^
#16 7.793     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.793     [javac]     int n = reader.getCoreMetadataList().size();
#16 7.793     [javac]                   ^
#16 7.793     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 7.793     [javac]     reader.setCoreIndex(coreIndex);
#16 7.793     [javac]           ^
#16 7.793     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.793     [javac]     int n = reader.getCoreMetadataList().size();
#16 7.793     [javac]                   ^
#16 7.793     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.793     [javac]     int n = reader.getCoreMetadataList().size();
#16 7.793     [javac]                   ^
#16 7.793     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 7.793     [javac]     if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 7.793     [javac]                                         ^
#16 7.793     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.793     [javac]     int n = reader.getCoreMetadataList().size();
#16 7.793     [javac]                   ^
#16 7.793     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 7.793     [javac]     if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 7.794     [javac]                                         ^
#16 7.794     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.794     [javac]     int n = reader.getCoreMetadataList().size();
#16 7.794     [javac]                   ^
#16 7.794     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 7.794     [javac]     if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 7.794     [javac]                                  ^
#16 7.794     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 7.794     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 7.794     [javac]                  ^
#16 7.794     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 7.794     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 7.794     [javac]                                              ^
#16 7.794     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.794     [javac]     return noStitch ? reader.getCoreMetadataList() : core;
#16 7.794     [javac]                             ^
#16 7.894     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.894     [javac]     if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 7.894     [javac]               ^
#16 7.894     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.894     [javac]       seriesCount = reader.getCoreMetadataList().size();
#16 7.894     [javac]                           ^
#16 7.894     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.894     [javac]       if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 7.895     [javac]                 ^
#16 7.895     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.895     [javac]     if (reader.getCoreMetadataList().size() > 1) return 0;
#16 7.895     [javac]               ^
#16 7.895     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.895     [javac]       r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 7.895     [javac]                            ^
#16 7.995     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.995     [javac]     int seriesCount = unwrap().getCoreMetadataList().size();
#16 7.995     [javac]                               ^
#16 8.096     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 8.096     [javac]     BitWriter out = new BitWriter();
#16 8.096     [javac]     ^
#16 8.096     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 8.096     [javac]     BitWriter out = new BitWriter();
#16 8.096     [javac]                         ^
#16 8.196     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 8.196     [javac]       return new Double(v);
#16 8.196     [javac]              ^
#16 8.897     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2106: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 8.897     [javac]     return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#16 8.897     [javac]                                         ^
#16 8.897     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2113: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 8.897     [javac]     return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#16 8.897     [javac]                                         ^
#16 8.897     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2120: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 8.897     [javac]     return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#16 8.897     [javac]                                         ^
#16 8.997     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 8.997     [javac]                channelNames.put(new Integer(channelNames.size()), value);
#16 8.997     [javac]                                 ^
#16 9.198     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:618: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.198     [javac]       OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 9.198     [javac]                                                                    ^
#16 9.298     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 9.298     [javac]     StreamTokenizer st = new StreamTokenizer(in);
#16 9.298     [javac]                          ^
#16 9.398     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.399     [javac]     core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 9.399     [javac]                                                    ^
#16 9.399     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 9.399     [javac]   protected ReflectedUniverse r;
#16 9.399     [javac]             ^
#16 9.399     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 9.399     [javac]       r = new ReflectedUniverse();
#16 9.399     [javac]               ^
#16 9.399     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1043: warning: [deprecation] NM in UNITS has been deprecated
#16 9.399     [javac]           wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 9.399     [javac]                                                                               ^
#16 9.399     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1075: warning: [deprecation] MM in UNITS has been deprecated
#16 9.399     [javac]           sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 9.399     [javac]                                                                                ^
#16 9.399     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1088: warning: [deprecation] MM in UNITS has been deprecated
#16 9.399     [javac]         String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 9.399     [javac]                                                                                   ^
#16 9.399     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1089: warning: [deprecation] MM in UNITS has been deprecated
#16 9.399     [javac]         String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 9.399     [javac]                                                                                   ^
#16 9.399     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1108: warning: [deprecation] MM in UNITS has been deprecated
#16 9.399     [javac]         volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 9.399     [javac]                                                                                        ^
#16 9.399     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1112: warning: [deprecation] MM in UNITS has been deprecated
#16 9.399     [javac]         volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 9.399     [javac]                                                                                         ^
#16 9.399     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1118: warning: [deprecation] MM in UNITS has been deprecated
#16 9.400     [javac]         volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 9.400     [javac]                                                                                        ^
#16 9.400     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1166: warning: [deprecation] MM in UNITS has been deprecated
#16 9.400     [javac]             offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 9.400     [javac]                                                                                                               ^
#16 9.400     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1170: warning: [deprecation] MM in UNITS has been deprecated
#16 9.400     [javac]             offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 9.400     [javac]                                                                                                               ^
#16 9.500     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 9.500     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 9.500     [javac]               ^
#16 9.500     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 9.500     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 9.500     [javac]                                            ^
#16 9.500     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 9.500     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 9.500     [javac]               ^
#16 9.500     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 9.500     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 9.500     [javac]                                             ^
#16 9.601     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 9.601     [javac]       libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 9.601     [javac]                                        ^
#16 9.601     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:320: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 9.601     [javac]         doubleResult[i] = new Double(result.get(i).doubleValue());
#16 9.601     [javac]                           ^
#16 9.601     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:342: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 9.601     [javac]       result[i] = new Double(readNumber().doubleValue());
#16 9.601     [javac]                   ^
#16 9.601     [javac] Note: Some input files use unchecked or unsafe operations.
#16 9.601     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 9.601     [javac] 50 warnings
#16 9.625 
#16 9.625 formats-bsd.jar:
#16 9.633       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 9.752 [resolver:install] Using default POM (ome:formats-bsd:8.2.0-SNAPSHOT)
#16 9.756 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.pom
#16 9.776 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar
#16 9.778 [resolver:install] Installing ome:formats-bsd:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 9.780 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 9.781 
#16 9.781 deps-formats-gpl:
#16 9.781 
#16 9.781 jar-formats-gpl:
#16 9.875      [echo] isSnapshot = true
#16 10.01 
#16 10.01 init-title:
#16 10.01      [echo] ----------=========== formats-gpl ===========----------
#16 10.01 
#16 10.01 init-timestamp:
#16 10.01 
#16 10.01 init:
#16 10.01 
#16 10.01 copy-resources:
#16 10.01     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 10.01      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 10.02 
#16 10.02 compile:
#16 10.39 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 10.63 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 11.20 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom (0 B at 0.0 KB/sec)
#16 11.20 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 11.21 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 11.49 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom (0 B at 0.0 KB/sec)
#16 11.50 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 11.52 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 11.79 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom (0 B at 0.0 KB/sec)
#16 11.86 [resolver:resolve] Resolving artifacts
#16 11.87 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 11.87 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 11.92 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 11.92 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 12.06 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (0 B at 0.0 KB/sec)
#16 12.33 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (0 B at 0.0 KB/sec)
#16 12.35     [javac] Compiling 175 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 12.56     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 13.86     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 13.86     [javac] import loci.formats.codec.BitWriter;
#16 13.86     [javac]                          ^
#16 13.86     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 13.86     [javac] import loci.formats.codec.BitWriter;
#16 13.86     [javac]                          ^
#16 15.96     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 15.96     [javac]       LOGGER.trace("Parsing tokens: {}", tokens);
#16 15.96     [javac]                                          ^
#16 15.96     [javac]   cast to Object for a varargs call
#16 15.96     [javac]   cast to Object[] for a non-varargs call and to suppress this warning
#16 15.96     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1257: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.96     [javac]     BitWriter bits = null;
#16 15.96     [javac]     ^
#16 15.96     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1259: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.96     [javac]       bits = new BitWriter(planes[index].length / 8);
#16 15.96     [javac]                  ^
#16 16.36     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 16.36     [javac]     CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 16.36     [javac]                                                    ^
#16 16.76     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 16.76     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 16.76     [javac]     ^
#16 16.76     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 16.76     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 16.76     [javac]                          ^
#16 17.02     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:170: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 17.02     [javac]     Variable variable = group.findVariable(variableName);
#16 17.02     [javac]                              ^
#16 17.02     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:197: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 17.02     [javac]     Variable variable = group.findVariable(variableName);
#16 17.02     [javac]                              ^
#16 17.02     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:200: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 17.02     [javac]       List<Attribute> attributes = variable.getAttributes();
#16 17.02     [javac]                                            ^
#16 17.02     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getName() in CDMNode has been deprecated
#16 17.02     [javac]       String groupName = group.getName();
#16 17.02     [javac]                               ^
#16 17.02     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:239: warning: [deprecation] getAttributes() in Group has been deprecated
#16 17.02     [javac]       List<Attribute> attributes = group.getAttributes();
#16 17.02     [javac]                                         ^
#16 17.02     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:247: warning: [deprecation] getName() in CDMNode has been deprecated
#16 17.02     [javac]         String variableName = variable.getName();
#16 17.02     [javac]                                       ^
#16 17.02     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:270: warning: [deprecation] findGroup(String) in Group has been deprecated
#16 17.02     [javac]       Group nextParent = parent.findGroup(token);
#16 17.02     [javac]                                ^
#16 17.02     [javac] Note: Some input files use unchecked or unsafe operations.
#16 17.02     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 17.02     [javac] 16 warnings
#16 17.02 
#16 17.02 formats-gpl.jar:
#16 17.03       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 17.17 [resolver:install] Using default POM (ome:formats-gpl:8.2.0-SNAPSHOT)
#16 17.18 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#16 17.18 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#16 17.18 [resolver:install] Installing ome:formats-gpl:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 17.18 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 17.18 
#16 17.18 deps-bio-formats-plugins:
#16 17.18 
#16 17.18 jar-bio-formats-plugins:
#16 17.28      [echo] isSnapshot = true
#16 17.41 
#16 17.41 init-title:
#16 17.41      [echo] ----------=========== bio-formats_plugins ===========----------
#16 17.41 
#16 17.41 init-timestamp:
#16 17.41 
#16 17.41 init:
#16 17.41 
#16 17.41 copy-resources:
#16 17.41     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 17.42      [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 17.42 
#16 17.42 compile:
#16 17.67 [resolver:resolve] Resolving artifacts
#16 17.68     [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 17.89     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 18.69     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.69     [javac] import loci.common.ReflectedUniverse;
#16 18.69     [javac]                   ^
#16 18.79     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.79     [javac] import loci.common.ReflectedUniverse;
#16 18.79     [javac]                   ^
#16 19.19     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 19.19     [javac]     "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 19.19     [javac]                                      ^
#16 19.39     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.39     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 19.39     [javac]         ^
#16 19.39     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.39     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 19.39     [javac]                                   ^
#16 19.49     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.49     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 19.49     [javac]     ^
#16 19.49     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.49     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 19.49     [javac]                                ^
#16 19.87     [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 19.87     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 19.87     [javac] 8 warnings
#16 19.87 
#16 19.87 bio-formats-plugins.jar:
#16 19.88       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 19.91 [resolver:install] Using default POM (ome:bio-formats_plugins:8.2.0-SNAPSHOT)
#16 19.91 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#16 19.91 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#16 19.91 [resolver:install] Installing ome:bio-formats_plugins:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 19.92 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 19.92 
#16 19.92 deps-bio-formats-tools:
#16 19.92 
#16 19.92 jar-bio-formats-tools:
#16 20.02      [echo] isSnapshot = true
#16 20.14 
#16 20.14 init-title:
#16 20.14      [echo] ----------=========== bio-formats-tools ===========----------
#16 20.14 
#16 20.14 init-timestamp:
#16 20.14 
#16 20.14 init:
#16 20.14 
#16 20.14 copy-resources:
#16 20.15     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 20.15 
#16 20.15 compile:
#16 20.37 [resolver:resolve] Resolving artifacts
#16 20.38     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 20.59     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 21.68     [javac] 1 warning
#16 21.68 
#16 21.68 bio-formats-tools.jar:
#16 21.68       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 21.69 [resolver:install] Using default POM (ome:bio-formats-tools:8.2.0-SNAPSHOT)
#16 21.69 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#16 21.70 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#16 21.70 [resolver:install] Installing ome:bio-formats-tools:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 21.70 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 21.70 
#16 21.70 deps-tests:
#16 21.70 
#16 21.70 jar-tests:
#16 21.79      [echo] isSnapshot = true
#16 21.93 
#16 21.93 init-title:
#16 21.94      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 21.94 
#16 21.94 init-timestamp:
#16 21.94 
#16 21.94 init:
#16 21.94 
#16 21.94 copy-resources:
#16 21.94     [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 21.94 
#16 21.94 compile:
#16 22.26 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 22.34 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 22.35 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 22.77 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.20 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#16 23.22 [resolver:resolve] Resolving artifacts
#16 23.23 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 23.27 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 23.28 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 23.69 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.05 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 24.05     [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 24.26     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 25.26     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:605: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 25.26     [javac]         int index = unflattenedReader.getCoreIndex();
#16 25.26     [javac]                                      ^
#16 25.26     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:606: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 25.26     [javac]         reader.setCoreIndex(index);
#16 25.26     [javac]               ^
#16 25.56     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2257: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 25.56     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 25.56     [javac]                                              ^
#16 25.56     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2423: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 25.56     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 25.56     [javac]                                              ^
#16 25.76     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 25.76     [javac]         FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 25.76     [javac]                                                    ^
#16 25.76     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 25.76     [javac]         FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 25.76     [javac]                                                    ^
#16 25.83     [javac] Note: Some input files use unchecked or unsafe operations.
#16 25.83     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 25.83     [javac] 7 warnings
#16 25.83 
#16 25.83 tests.jar:
#16 25.83       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 25.85 [resolver:install] Using default POM (ome:test-suite:8.2.0-SNAPSHOT)
#16 25.85 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.pom
#16 25.85 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.jar
#16 25.85 [resolver:install] Installing ome:test-suite:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 25.86 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 25.86 
#16 25.86 jars:
#16 25.86 
#16 25.86 copy-jars:
#16 25.86 
#16 25.86 deps-formats-api:
#16 25.91      [echo] isSnapshot = true
#16 25.95 
#16 25.95 install-pom:
#16 26.09 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/pom-bio-formats-8.2.0-SNAPSHOT.pom
#16 26.09 [resolver:install] Installing ome:pom-bio-formats:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 26.09 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 26.12 
#16 26.12 jar-formats-api:
#16 26.21      [echo] isSnapshot = true
#16 26.34 
#16 26.34 init-title:
#16 26.34      [echo] ----------=========== formats-api ===========----------
#16 26.34 
#16 26.34 init-timestamp:
#16 26.34 
#16 26.34 init:
#16 26.34 
#16 26.34 copy-resources:
#16 26.35 
#16 26.35 compile:
#16 26.48 [resolver:resolve] Resolving artifacts
#16 26.49 
#16 26.49 formats-api.jar:
#16 26.51 [resolver:install] Using default POM (ome:formats-api:8.2.0-SNAPSHOT)
#16 26.51 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.pom
#16 26.51 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.jar
#16 26.52 [resolver:install] Installing ome:formats-api:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 26.52 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 26.52 
#16 26.52 deps-turbojpeg:
#16 26.52 
#16 26.52 jar-turbojpeg:
#16 26.60      [echo] isSnapshot = true
#16 26.73 
#16 26.73 init-title:
#16 26.73      [echo] ----------=========== turbojpeg ===========----------
#16 26.73 
#16 26.73 init-timestamp:
#16 26.74 
#16 26.74 init:
#16 26.74 
#16 26.74 copy-resources:
#16 26.74 
#16 26.74 compile:
#16 26.74 [resolver:resolve] Resolving artifacts
#16 26.75 
#16 26.75 jar:
#16 26.75 [resolver:install] Using default POM (ome:turbojpeg:8.2.0-SNAPSHOT)
#16 26.76 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.pom
#16 26.76 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar
#16 26.76 [resolver:install] Installing ome:turbojpeg:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 26.77 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 26.77 
#16 26.77 deps-formats-bsd:
#16 26.77 
#16 26.77 jar-formats-bsd:
#16 26.86      [echo] isSnapshot = true
#16 26.99 
#16 26.99 init-title:
#16 26.99      [echo] ----------=========== formats-bsd ===========----------
#16 26.99 
#16 26.99 init-timestamp:
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#16 26.99 init:
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#16 26.99 
#16 26.99 compile:
#16 27.21 [resolver:resolve] Resolving artifacts
#16 27.23 
#16 27.23 formats-bsd.jar:
#16 27.27 [resolver:install] Using default POM (ome:formats-bsd:8.2.0-SNAPSHOT)
#16 27.27 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.pom
#16 27.27 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar
#16 27.27 [resolver:install] Installing ome:formats-bsd:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 27.28 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 27.28 
#16 27.28 deps-formats-gpl:
#16 27.28 
#16 27.28 jar-formats-gpl:
#16 27.36      [echo] isSnapshot = true
#16 27.49 
#16 27.49 init-title:
#16 27.49      [echo] ----------=========== formats-gpl ===========----------
#16 27.49 
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#16 27.49 init:
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#16 27.49 
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#16 27.71 [resolver:resolve] Resolving artifacts
#16 27.73 
#16 27.73 formats-gpl.jar:
#16 27.77 [resolver:install] Using default POM (ome:formats-gpl:8.2.0-SNAPSHOT)
#16 27.77 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#16 27.77 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#16 27.77 [resolver:install] Installing ome:formats-gpl:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 27.78 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 27.78 
#16 27.78 deps-bio-formats-plugins:
#16 27.78 
#16 27.78 jar-bio-formats-plugins:
#16 27.87      [echo] isSnapshot = true
#16 28.00 
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#16 28.00      [echo] ----------=========== bio-formats_plugins ===========----------
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#16 28.26 [resolver:resolve] Resolving artifacts
#16 28.27 
#16 28.27 bio-formats-plugins.jar:
#16 28.29 [resolver:install] Using default POM (ome:bio-formats_plugins:8.2.0-SNAPSHOT)
#16 28.29 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#16 28.29 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#16 28.29 [resolver:install] Installing ome:bio-formats_plugins:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 28.30 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 28.30 
#16 28.30 deps-bio-formats-tools:
#16 28.30 
#16 28.30 jar-bio-formats-tools:
#16 28.39      [echo] isSnapshot = true
#16 28.52 
#16 28.52 init-title:
#16 28.52      [echo] ----------=========== bio-formats-tools ===========----------
#16 28.52 
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#16 28.52 init:
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#16 28.52 
#16 28.52 compile:
#16 28.76 [resolver:resolve] Resolving artifacts
#16 28.77 
#16 28.77 bio-formats-tools.jar:
#16 28.77 [resolver:install] Using default POM (ome:bio-formats-tools:8.2.0-SNAPSHOT)
#16 28.78 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#16 28.78 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#16 28.78 [resolver:install] Installing ome:bio-formats-tools:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 28.78 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 28.78 
#16 28.78 deps-tests:
#16 28.78 
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#16 28.87      [echo] isSnapshot = true
#16 29.01 
#16 29.01 init-title:
#16 29.01      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 29.01 
#16 29.01 init-timestamp:
#16 29.01 
#16 29.01 init:
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#16 29.01 copy-resources:
#16 29.01 
#16 29.01 compile:
#16 29.26 [resolver:resolve] Resolving artifacts
#16 29.27 
#16 29.27 tests.jar:
#16 29.28 [resolver:install] Using default POM (ome:test-suite:8.2.0-SNAPSHOT)
#16 29.28 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.pom
#16 29.28 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.jar
#16 29.28 [resolver:install] Installing ome:test-suite:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 29.29 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 29.29 
#16 29.29 jars:
#16 29.29 
#16 29.29 tools:
#16 29.29      [echo] ----------=========== bioformats_package ===========----------
#16 29.37      [echo] isSnapshot = true
#16 29.58 
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#16 29.58 
#16 29.58 bundle:
#16 29.82 [resolver:resolve] Resolving artifacts
#16 29.83     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.87     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.26-SNAPSHOT/ome-common-6.0.26-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.90     [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.93     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.94     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 30.57     [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.59     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.59     [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.7/joda-time-2.12.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.81     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.1-jre/guava-32.0.1-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 31.42     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.42     [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 31.91     [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.00     [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 35.16     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.17     [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.21     [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.70     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.15/logback-core-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.83     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.15/logback-classic-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.29       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 42.44    [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 43.21 [resolver:install] Using default POM (ome:bioformats_package:8.2.0-SNAPSHOT)
#16 43.22 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/bioformats_package-8.2.0-SNAPSHOT.pom
#16 43.22 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/bioformats_package-8.2.0-SNAPSHOT.jar
#16 43.26 [resolver:install] Installing ome:bioformats_package:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 43.26 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 43.27 
#16 43.27 BUILD SUCCESSFUL
#16 43.27 Total time: 42 seconds
#16 DONE 45.3s

#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.0s

#18 exporting to image
#18 exporting layers
#18 exporting layers 3.9s done
#18 writing image sha256:772b5801ef034a5ac15b5b8a1abd1f7a39ebe6abfca361500a63e0d968f11b8b done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 4.0s

 1 warning found (use docker --debug to expand):
 - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS