![[Jenkins]](/jenkins/static/9161e9ff/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 637 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision b68c3cf06205611a43f501104408df0df16649d6 (refs/remotes/origin/master) Commit message: "Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b68c3cf06205611a43f501104408df0df16649d6 # timeout=10 > git rev-list --no-walk b68c3cf06205611a43f501104408df0df16649d6 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 563 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.4 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.2-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.14-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.0 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-46.0.2-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.8.3-py3-none-any.whl (161 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.23-py3-none-any.whl (118 kB) Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB) Using cached ruamel.yaml.clib-0.2.14-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2025.8.3 cffi-2.0.0 charset_normalizer-3.4.3 cryptography-46.0.2 future-1.0.0 idna-3.10 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.14 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-10-02 00:20:22,876 [ scc.config] DEBUG Found github.token 2025-10-02 00:20:22,877 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-10-02 00:20:23,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:20:23,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:20:24,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-10-02 00:20:24,038 [ scc.gh] DEBUG 4659 remaining from 5000 (Reset at 01:10 2025-10-02 00:20:24,038 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-02 00:20:24,041 [ scc.git] DEBUG Check current status 2025-10-02 00:20:24,041 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-02 00:20:24,043 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c 2025-10-02 00:20:24,043 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-02 00:20:24,080 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-10-02 00:20:24,082 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-10-02 00:20:24,089 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5) 2025-10-02 00:20:24,093 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-10-02 00:20:24,097 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-10-02 00:20:24,099 [ scc.config] DEBUG Found remote.origin.url 2025-10-02 00:20:24,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-10-02 00:20:25,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-02 00:20:25,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-02 00:20:25,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-02 00:20:26,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-02 00:20:26,368 [ scc.git] DEBUG Resetting... 2025-10-02 00:20:26,368 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-10-02 00:20:26,372 [ scc.git] DEBUG HEAD is now at b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c 2025-10-02 00:20:26,372 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-10-02 00:20:26,420 [ scc.git] DEBUG Check current status 2025-10-02 00:20:26,421 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-02 00:20:26,423 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c 2025-10-02 00:20:26,423 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-02 00:20:26,460 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-10-02 00:20:26,462 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-10-02 00:20:26,469 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5) 2025-10-02 00:20:26,473 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-10-02 00:20:26,476 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-10-02 00:20:26,477 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-10-02 00:20:26,477 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-10-02 00:20:26,477 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-10-02 00:20:26,477 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-10-02 00:20:26,477 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-10-02 00:20:26,477 [ scc.repo] DEBUG ## PRs found: 2025-10-02 00:20:26,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2025-10-02 00:20:27,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/333 HTTP/1.1" 200 None 2025-10-02 00:20:27,332 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-02 00:20:27,333 [ scc.repo] DEBUG - PR 333 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `57934f0`' 2025-10-02 00:20:27,333 [ scc.repo] DEBUG ## Branches found: 2025-10-02 00:20:27,333 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:20:27,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:20:27,335 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-02 00:20:27,337 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-02 00:20:27,337 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-02 00:20:27,339 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-02 00:20:27,342 [ scc.git] DEBUG Already up to date. 2025-10-02 00:20:27,342 [ scc.git] DEBUG Calling 'git fetch origin pull/333/head' 2025-10-02 00:20:27,632 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-10-02 00:20:27,632 [ scc.git] DEBUG * branch refs/pull/333/head -> FETCH_HEAD 2025-10-02 00:20:27,639 [ scc.git] DEBUG ## Unique users: [] 2025-10-02 00:20:27,639 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:20:27,639 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:20:27,641 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4e34f39c88ec1cbd7ec42af90e516d68f02a1ba9' 2025-10-02 00:20:27,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:20:27,645 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 333 (Bump omero-marshal from `6d44f66` to `57934f0`) 4e34f39c88ec1cbd7ec42af90e516d68f02a1ba9' 2025-10-02 00:20:27,652 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:20:27,654 [ scc.git] DEBUG omero-marshal | 2 +- 2025-10-02 00:20:27,654 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-02 00:20:27,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:20:27,788 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-02 00:20:27,835 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out '57934f0fd75d0a3091d06b5e943094a27c56f328' 2025-10-02 00:20:27,836 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:20:27,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:20:27,838 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-02 00:20:27,867 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc2160014d0> has no local changes 2025-10-02 00:20:27,867 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 333 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `57934f0`' Generated by OMERO-python-superbuild-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/535/)' 2025-10-02 00:20:27,887 [ scc.git] DEBUG [detached HEAD f3a3a93] merge master -Dorg -Snone 2025-10-02 00:20:27,887 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-10-02 00:20:27,887 [ scc.merge] INFO Already up to date. 2025-10-02 00:20:27,887 [ scc.merge] INFO 2025-10-02 00:20:27,887 [ scc.merge] INFO Merged PRs: 2025-10-02 00:20:27,887 [ scc.merge] INFO - PR 333 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `57934f0`' 2025-10-02 00:20:27,887 [ scc.merge] INFO 2025-10-02 00:20:27,887 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-10-02 00:20:27,887 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' From https://github.com/ome/omero-marshal 57934f0..a3dd99b master -> origin/master Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-10-02 00:20:29,968 [ scc.config] DEBUG Found github.token 2025-10-02 00:20:29,970 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-10-02 00:20:30,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:20:30,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:20:30,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-10-02 00:20:30,945 [ scc.gh] DEBUG 4649 remaining from 5000 (Reset at 01:10 2025-10-02 00:20:30,946 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-02 00:20:30,948 [ scc.git] DEBUG Check current status 2025-10-02 00:20:30,948 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-02 00:20:30,950 [ scc.git] DEBUG f3a3a93 merge master -Dorg -Snone 2025-10-02 00:20:30,950 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-02 00:20:30,988 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-10-02 00:20:30,991 [ scc.git] DEBUG +a3dd99b825ad44c9beadc38a8ae8ba94a155f62c omero-marshal (v0.9.0-18-ga3dd99b) 2025-10-02 00:20:30,998 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5) 2025-10-02 00:20:31,002 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-10-02 00:20:31,006 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-10-02 00:20:31,008 [ scc.config] DEBUG Found remote.origin.url 2025-10-02 00:20:31,008 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-10-02 00:20:31,010 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-10-02 00:20:31,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-10-02 00:20:31,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-02 00:20:32,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-02 00:20:32,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-02 00:20:33,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-02 00:20:33,160 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-02 00:20:33,206 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-10-02 00:20:33,206 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-02 00:20:33,208 [ scc.git] DEBUG Check current status 2025-10-02 00:20:33,209 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-02 00:20:33,211 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-10-02 00:20:33,211 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-02 00:20:33,249 [ scc.config] DEBUG Found remote.origin.url 2025-10-02 00:20:33,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-10-02 00:20:34,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-02 00:20:34,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-02 00:20:35,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-02 00:20:35,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-02 00:20:35,456 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-02 00:20:35,492 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-10-02 00:20:35,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-10-02 00:20:35,493 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-02 00:20:35,494 [ scc.git] DEBUG Check current status 2025-10-02 00:20:35,495 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-02 00:20:35,497 [ scc.git] DEBUG a3dd99b Merge pull request #87 from lubianat/master 2025-10-02 00:20:35,497 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-02 00:20:35,534 [ scc.config] DEBUG Found remote.origin.url 2025-10-02 00:20:35,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-10-02 00:20:36,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-02 00:20:36,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-02 00:20:37,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-02 00:20:37,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-02 00:20:37,772 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-02 00:20:37,808 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-10-02 00:20:37,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-10-02 00:20:37,809 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-02 00:20:37,811 [ scc.git] DEBUG Check current status 2025-10-02 00:20:37,811 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-02 00:20:37,813 [ scc.git] DEBUG 780876c5 Merge pull request #443 from sbesson/gateway_tests_fake 2025-10-02 00:20:37,813 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-02 00:20:37,851 [ scc.config] DEBUG Found remote.origin.url 2025-10-02 00:20:38,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-10-02 00:20:38,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-02 00:20:39,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-02 00:20:39,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-02 00:20:39,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-02 00:20:39,954 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-02 00:20:39,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-10-02 00:20:39,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-10-02 00:20:39,992 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-02 00:20:39,994 [ scc.git] DEBUG Check current status 2025-10-02 00:20:39,994 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-02 00:20:39,996 [ scc.git] DEBUG 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-10-02 00:20:39,997 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-02 00:20:40,034 [ scc.config] DEBUG Found remote.origin.url 2025-10-02 00:20:40,035 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-10-02 00:20:40,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-10-02 00:20:41,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-02 00:20:41,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-02 00:20:41,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-02 00:20:42,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-02 00:20:42,262 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-02 00:20:42,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-10-02 00:20:42,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-10-02 00:20:42,301 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-02 00:20:42,303 [ scc.git] DEBUG Check current status 2025-10-02 00:20:42,303 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-02 00:20:42,305 [ scc.git] DEBUG 2a7c4d2e3 Bump version: 5.29.2 → 5.29.3.dev0 2025-10-02 00:20:42,305 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-02 00:20:42,343 [ scc.config] DEBUG Found remote.origin.url 2025-10-02 00:20:42,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-10-02 00:20:43,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-02 00:20:43,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-02 00:20:44,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-02 00:20:44,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-02 00:20:44,546 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-02 00:20:44,583 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-10-02 00:20:44,583 [ scc.git] DEBUG Resetting... 2025-10-02 00:20:44,583 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-10-02 00:20:44,586 [ scc.git] DEBUG HEAD is now at f3a3a93 merge master -Dorg -Snone 2025-10-02 00:20:44,586 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-10-02 00:20:44,634 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out '57934f0fd75d0a3091d06b5e943094a27c56f328' 2025-10-02 00:20:44,645 [ scc.git] DEBUG Check current status 2025-10-02 00:20:44,645 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-02 00:20:44,647 [ scc.git] DEBUG f3a3a93 merge master -Dorg -Snone 2025-10-02 00:20:44,647 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-02 00:20:44,683 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-10-02 00:20:44,686 [ scc.git] DEBUG 57934f0fd75d0a3091d06b5e943094a27c56f328 omero-marshal (v0.9.0-15-g57934f0) 2025-10-02 00:20:44,693 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5) 2025-10-02 00:20:44,697 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-10-02 00:20:44,700 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-10-02 00:20:44,701 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-10-02 00:20:44,701 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-10-02 00:20:44,701 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-10-02 00:20:44,701 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-10-02 00:20:44,701 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-10-02 00:20:44,701 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-10-02 00:20:44,701 [ scc.repo] DEBUG ## PRs found: 2025-10-02 00:20:45,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2025-10-02 00:20:45,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/333 HTTP/1.1" 200 None 2025-10-02 00:20:45,489 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-02 00:20:46,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/4e34f39c88ec1cbd7ec42af90e516d68f02a1ba9 HTTP/1.1" 200 None 2025-10-02 00:20:46,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/4e34f39c88ec1cbd7ec42af90e516d68f02a1ba9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:20:47,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/4e34f39c88ec1cbd7ec42af90e516d68f02a1ba9 HTTP/1.1" 200 None 2025-10-02 00:20:47,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/4e34f39c88ec1cbd7ec42af90e516d68f02a1ba9?per_page=1 HTTP/1.1" 200 2 2025-10-02 00:20:47,610 [ scc.repo] DEBUG - PR 333 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `57934f0`' 2025-10-02 00:20:47,611 [ scc.repo] DEBUG ## Branches found: 2025-10-02 00:20:47,611 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:20:47,611 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:20:47,613 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-02 00:20:47,615 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-02 00:20:47,615 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-02 00:20:47,617 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-02 00:20:47,620 [ scc.git] DEBUG Already up to date. 2025-10-02 00:20:47,621 [ scc.git] DEBUG Calling 'git fetch origin pull/333/head' 2025-10-02 00:20:47,913 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-10-02 00:20:47,913 [ scc.git] DEBUG * branch refs/pull/333/head -> FETCH_HEAD 2025-10-02 00:20:47,918 [ scc.git] DEBUG ## Unique users: [] 2025-10-02 00:20:47,918 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:20:47,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:20:47,920 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4e34f39c88ec1cbd7ec42af90e516d68f02a1ba9' 2025-10-02 00:20:47,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:20:47,925 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 333 (Bump omero-marshal from `6d44f66` to `57934f0`) 4e34f39c88ec1cbd7ec42af90e516d68f02a1ba9' 2025-10-02 00:20:47,927 [ scc.git] DEBUG Already up to date. 2025-10-02 00:20:48,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:20:48,090 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-02 00:20:48,128 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:20:48,128 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:20:48,130 [ scc.repo] DEBUG ## PRs found: 2025-10-02 00:20:48,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-10-02 00:20:49,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/26 HTTP/1.1" 200 None 2025-10-02 00:20:49,137 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-02 00:20:49,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a HTTP/1.1" 200 None 2025-10-02 00:20:50,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:20:50,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-02 00:20:51,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a HTTP/1.1" 200 None 2025-10-02 00:20:51,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/38aa63d7d4014725060e4ecaa159922370485c5a?per_page=1 HTTP/1.1" 200 2 2025-10-02 00:20:51,745 [ scc.repo] DEBUG - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-02 00:20:52,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-10-02 00:20:52,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-10-02 00:20:53,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-10-02 00:20:53,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:20:54,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-10-02 00:20:54,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-10-02 00:20:54,614 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-10-02 00:20:54,614 [ scc.repo] DEBUG ## Branches found: 2025-10-02 00:20:54,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-10-02 00:20:54,614 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:20:54,614 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:20:54,616 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-02 00:20:54,618 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-02 00:20:54,618 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-02 00:20:54,621 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-02 00:20:54,624 [ scc.git] DEBUG Already up to date. 2025-10-02 00:20:54,624 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-10-02 00:20:54,918 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-10-02 00:20:54,918 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-10-02 00:20:54,922 [ scc.git] DEBUG Calling 'git fetch origin pull/26/head' 2025-10-02 00:20:55,207 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-10-02 00:20:55,207 [ scc.git] DEBUG * branch refs/pull/26/head -> FETCH_HEAD 2025-10-02 00:20:55,211 [ scc.git] DEBUG ## Unique users: [] 2025-10-02 00:20:55,211 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:20:55,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:20:55,213 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-10-02 00:20:55,216 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:20:55,218 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-10-02 00:20:55,230 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-10-02 00:20:55,230 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-10-02 00:20:55,230 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-10-02 00:20:55,230 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-10-02 00:20:55,230 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-10-02 00:20:55,230 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-10-02 00:20:55,230 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-10-02 00:20:55,230 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-10-02 00:20:55,230 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-10-02 00:20:55,231 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:20:55,234 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-10-02 00:20:55,234 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-10-02 00:20:55,234 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-10-02 00:20:55,234 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-10-02 00:20:55,234 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-10-02 00:20:55,234 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-10-02 00:20:55,234 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-10-02 00:20:55,235 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-10-02 00:20:55,235 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-10-02 00:20:55,235 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-10-02 00:20:55,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:20:55,374 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38aa63d7d4014725060e4ecaa159922370485c5a' 2025-10-02 00:20:55,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:20:55,379 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 26 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38aa63d7d4014725060e4ecaa159922370485c5a' 2025-10-02 00:20:55,387 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:20:55,390 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-02 00:20:55,390 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-02 00:20:55,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:20:55,779 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-02 00:20:55,815 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:20:55,815 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:20:55,817 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-02 00:20:55,853 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-02 00:20:55,857 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd513452b90> has no local changes 2025-10-02 00:20:55,857 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-python-superbuild-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/535/)' 2025-10-02 00:20:55,863 [ scc.git] DEBUG [detached HEAD 38351fe] merge master -Dorg -Ssuccess-only 2025-10-02 00:20:55,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-10-02 00:20:55,863 [ scc.repo] DEBUG ## PRs found: 2025-10-02 00:20:56,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-10-02 00:20:56,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-10-02 00:20:57,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-10-02 00:20:57,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-10-02 00:20:58,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-10-02 00:20:58,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-10-02 00:20:59,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:21:00,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-10-02 00:21:00,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-10-02 00:21:00,779 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-10-02 00:21:01,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-10-02 00:21:01,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-10-02 00:21:02,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-10-02 00:21:02,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-10-02 00:21:02,718 [ scc.repo] DEBUG ## Branches found: 2025-10-02 00:21:02,718 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-10-02 00:21:02,718 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:21:02,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:21:02,721 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-02 00:21:02,723 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-02 00:21:02,723 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-02 00:21:02,726 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-02 00:21:02,733 [ scc.git] DEBUG Updating 57934f0..a3dd99b 2025-10-02 00:21:03,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/87 HTTP/1.1" 200 None 2025-10-02 00:21:03,421 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-10-02 00:21:03,712 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-10-02 00:21:03,712 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-10-02 00:21:03,716 [ scc.git] DEBUG ## Unique users: [] 2025-10-02 00:21:03,716 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:21:03,716 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:21:03,718 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-10-02 00:21:03,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:21:03,723 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-10-02 00:21:03,732 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-10-02 00:21:03,733 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:21:03,736 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-10-02 00:21:03,736 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-10-02 00:21:03,736 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-10-02 00:21:03,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:21:03,880 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-02 00:21:03,917 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:21:03,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:21:03,919 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-02 00:21:03,954 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-02 00:21:03,958 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd5134bef50> has no local changes 2025-10-02 00:21:03,958 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Updating 57934f0..a3dd99b Previously merged: - PR 87 lubianat 'Update README to match GitHub actions' Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/535/)' 2025-10-02 00:21:03,964 [ scc.git] DEBUG [detached HEAD 647f71b] merge master -Dorg -Ssuccess-only 2025-10-02 00:21:03,964 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-10-02 00:21:03,964 [ scc.repo] DEBUG ## PRs found: 2025-10-02 00:21:04,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-10-02 00:21:05,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/482 HTTP/1.1" 200 None 2025-10-02 00:21:05,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/69841a510b3f09b50c1a3966c5b99a84e965637b HTTP/1.1" 200 None 2025-10-02 00:21:06,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/69841a510b3f09b50c1a3966c5b99a84e965637b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:21:06,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/69841a510b3f09b50c1a3966c5b99a84e965637b/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-02 00:21:07,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/69841a510b3f09b50c1a3966c5b99a84e965637b HTTP/1.1" 200 None 2025-10-02 00:21:07,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/69841a510b3f09b50c1a3966c5b99a84e965637b?per_page=1 HTTP/1.1" 200 None 2025-10-02 00:21:08,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/69841a510b3f09b50c1a3966c5b99a84e965637b HTTP/1.1" 200 None 2025-10-02 00:21:08,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/69841a510b3f09b50c1a3966c5b99a84e965637b/status HTTP/1.1" 200 None 2025-10-02 00:21:08,503 [ scc.repo] DEBUG - PR 482 sbesson 'omero.gateway: fix DetailsWrapper.getExternalInfo regression' 2025-10-02 00:21:08,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/478 HTTP/1.1" 200 None 2025-10-02 00:21:09,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/478/comments HTTP/1.1" 200 None 2025-10-02 00:21:09,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9355ba49bedb4707025593d1092550fa82550d68 HTTP/1.1" 200 None 2025-10-02 00:21:10,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9355ba49bedb4707025593d1092550fa82550d68/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:21:10,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9355ba49bedb4707025593d1092550fa82550d68/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-02 00:21:11,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9355ba49bedb4707025593d1092550fa82550d68 HTTP/1.1" 200 None 2025-10-02 00:21:11,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/9355ba49bedb4707025593d1092550fa82550d68?per_page=1 HTTP/1.1" 200 None 2025-10-02 00:21:12,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9355ba49bedb4707025593d1092550fa82550d68 HTTP/1.1" 200 None 2025-10-02 00:21:12,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9355ba49bedb4707025593d1092550fa82550d68/status HTTP/1.1" 200 None 2025-10-02 00:21:12,792 [ scc.repo] DEBUG - PR 478 chris-allan 'Remove Python 2 compat from gateway utilities and scripts tests' 2025-10-02 00:21:13,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None 2025-10-02 00:21:13,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None 2025-10-02 00:21:14,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2025-10-02 00:21:14,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-10-02 00:21:15,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None 2025-10-02 00:21:15,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-10-02 00:21:16,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-10-02 00:21:16,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-10-02 00:21:17,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:21:17,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-10-02 00:21:18,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 2 2025-10-02 00:21:18,065 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-10-02 00:21:18,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-10-02 00:21:19,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-10-02 00:21:19,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-10-02 00:21:20,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:21:20,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-02 00:21:21,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-10-02 00:21:21,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-10-02 00:21:22,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-10-02 00:21:22,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:21:23,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-10-02 00:21:23,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-10-02 00:21:23,466 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-10-02 00:21:23,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-10-02 00:21:24,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-10-02 00:21:24,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-10-02 00:21:25,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:21:25,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-10-02 00:21:26,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-10-02 00:21:26,415 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-10-02 00:21:26,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-10-02 00:21:27,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-10-02 00:21:27,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-10-02 00:21:28,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-10-02 00:21:28,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-10-02 00:21:29,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:21:29,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-10-02 00:21:30,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-10-02 00:21:30,375 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-10-02 00:21:30,376 [ scc.repo] DEBUG ## Branches found: 2025-10-02 00:21:30,376 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-10-02 00:21:30,376 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:21:30,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:21:30,379 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-02 00:21:30,381 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-02 00:21:30,381 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-02 00:21:30,384 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-02 00:21:30,386 [ scc.git] DEBUG Already up to date. 2025-10-02 00:21:30,386 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-10-02 00:21:30,712 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-10-02 00:21:30,713 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-10-02 00:21:30,716 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-10-02 00:21:31,010 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-10-02 00:21:31,010 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-10-02 00:21:31,014 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-10-02 00:21:31,307 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-10-02 00:21:31,307 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-10-02 00:21:31,311 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-10-02 00:21:31,595 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-10-02 00:21:31,595 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-10-02 00:21:31,599 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2025-10-02 00:21:31,899 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-10-02 00:21:31,899 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2025-10-02 00:21:31,902 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2025-10-02 00:21:32,191 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-10-02 00:21:32,191 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2025-10-02 00:21:32,194 [ scc.git] DEBUG ## Unique users: [] 2025-10-02 00:21:32,194 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:21:32,194 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:21:32,197 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-10-02 00:21:32,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:21:32,210 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-10-02 00:21:32,230 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-10-02 00:21:32,230 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-10-02 00:21:32,231 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:21:32,235 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-10-02 00:21:32,235 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-10-02 00:21:32,235 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-10-02 00:21:32,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:21:32,389 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-10-02 00:21:32,400 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:21:32,402 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-10-02 00:21:32,420 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:21:32,423 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-10-02 00:21:32,423 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-10-02 00:21:32,423 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-10-02 00:21:32,423 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-10-02 00:21:32,423 [ scc.git] DEBUG create mode 100644 connect.py 2025-10-02 00:21:32,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:21:32,775 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-10-02 00:21:32,786 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:21:32,788 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-10-02 00:21:32,809 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-10-02 00:21:32,810 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:21:32,814 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-10-02 00:21:32,814 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-10-02 00:21:33,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:21:33,171 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-10-02 00:21:33,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:21:33,184 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-10-02 00:21:33,214 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-10-02 00:21:33,215 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:21:33,222 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-10-02 00:21:33,222 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-10-02 00:21:33,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:21:33,565 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9355ba49bedb4707025593d1092550fa82550d68' 2025-10-02 00:21:33,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:21:33,579 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Remove Python 2 compat from gateway utilities and scripts tests) 9355ba49bedb4707025593d1092550fa82550d68' 2025-10-02 00:21:33,599 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:21:33,603 [ scc.git] DEBUG src/omero/gateway/utils.py | 9 +-------- 2025-10-02 00:21:33,603 [ scc.git] DEBUG test/unit/scriptstest/test_parse.py | 6 ------ 2025-10-02 00:21:33,603 [ scc.git] DEBUG 2 files changed, 1 insertion(+), 14 deletions(-) 2025-10-02 00:21:33,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:21:33,963 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...69841a510b3f09b50c1a3966c5b99a84e965637b' 2025-10-02 00:21:33,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:21:33,977 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (omero.gateway: fix DetailsWrapper.getExternalInfo regression) 69841a510b3f09b50c1a3966c5b99a84e965637b' 2025-10-02 00:21:34,010 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-10-02 00:21:34,011 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:21:34,018 [ scc.git] DEBUG src/omero/gateway/__init__.py | 10 ++++++++++ 2025-10-02 00:21:34,018 [ scc.git] DEBUG test/unit/test_gateway.py | 29 +++++++++++++++++++++++++++-- 2025-10-02 00:21:34,019 [ scc.git] DEBUG 2 files changed, 37 insertions(+), 2 deletions(-) 2025-10-02 00:21:34,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:21:34,349 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-02 00:21:34,386 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:21:34,386 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:21:34,388 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-02 00:21:34,423 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-02 00:21:34,429 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd513430610> has no local changes 2025-10-02 00:21:34,429 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 478 chris-allan 'Remove Python 2 compat from gateway utilities and scripts tests' - PR 482 sbesson 'omero.gateway: fix DetailsWrapper.getExternalInfo regression' Generated by OMERO-python-superbuild-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/535/)' 2025-10-02 00:21:34,437 [ scc.git] DEBUG [detached HEAD 9264680f] merge master -Dorg -Ssuccess-only 2025-10-02 00:21:34,437 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-10-02 00:21:34,437 [ scc.git] INFO Overriding base-branch from master to develop 2025-10-02 00:21:34,437 [ scc.repo] DEBUG ## PRs found: 2025-10-02 00:21:34,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-10-02 00:21:35,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-10-02 00:21:35,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-10-02 00:21:36,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-10-02 00:21:36,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:21:37,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-02 00:21:37,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-10-02 00:21:38,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-10-02 00:21:38,280 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-10-02 00:21:38,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-10-02 00:21:39,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-10-02 00:21:39,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-10-02 00:21:40,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:21:40,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-10-02 00:21:41,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-10-02 00:21:41,195 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-10-02 00:21:41,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-10-02 00:21:42,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-10-02 00:21:42,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-10-02 00:21:43,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-10-02 00:21:43,209 [ scc.repo] DEBUG ## Branches found: 2025-10-02 00:21:43,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-10-02 00:21:43,209 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:21:43,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:21:43,211 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-10-02 00:21:43,214 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-02 00:21:43,214 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-10-02 00:21:43,216 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-10-02 00:21:43,219 [ scc.git] DEBUG Already up to date. 2025-10-02 00:21:43,219 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-10-02 00:21:43,512 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-10-02 00:21:43,512 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-10-02 00:21:43,517 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-10-02 00:21:43,810 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-10-02 00:21:43,810 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-10-02 00:21:43,813 [ scc.git] DEBUG ## Unique users: [] 2025-10-02 00:21:43,813 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:21:43,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:21:43,816 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-10-02 00:21:43,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:21:43,822 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-10-02 00:21:43,832 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-10-02 00:21:43,832 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-02 00:21:43,832 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-02 00:21:43,835 [ scc.git] DEBUG Calling 'git reset --hard 03b9116196e1a799dd18a666559613d912be01a5' 2025-10-02 00:21:43,838 [ scc.git] DEBUG HEAD is now at 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-10-02 00:21:43,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:21:43,979 [ scc.git] DEBUG Calling 'git merge-base 03b9116196e1a799dd18a666559613d912be01a5 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-10-02 00:21:43,983 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..03b9116196e1a799dd18a666559613d912be01a5' 2025-10-02 00:21:43,987 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#535](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/535/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/535/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-10-02 00:21:43,989 [ scc.config] DEBUG Found github.token 2025-10-02 00:21:43,989 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-10-02 00:21:43,989 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-10-02 00:21:43,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:21:43,995 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-10-02 00:21:44,003 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:21:44,006 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-10-02 00:21:44,006 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-10-02 00:21:44,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:21:44,382 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-02 00:21:44,419 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:21:44,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:21:44,421 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-02 00:21:44,458 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-02 00:21:44,461 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd513453a90> has no local changes 2025-10-02 00:21:44,461 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/535/)' 2025-10-02 00:21:44,467 [ scc.git] DEBUG [detached HEAD 8ddb050] merge master -Dorg -Ssuccess-only 2025-10-02 00:21:44,467 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-10-02 00:21:44,467 [ scc.repo] DEBUG ## PRs found: 2025-10-02 00:21:45,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-10-02 00:21:45,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/635 HTTP/1.1" 200 None 2025-10-02 00:21:46,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/635/comments HTTP/1.1" 200 None 2025-10-02 00:21:46,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/7446a144da7db207d65373456bf9347cc0a3dadb HTTP/1.1" 200 None 2025-10-02 00:21:47,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/7446a144da7db207d65373456bf9347cc0a3dadb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:21:47,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/7446a144da7db207d65373456bf9347cc0a3dadb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-02 00:21:47,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/7446a144da7db207d65373456bf9347cc0a3dadb HTTP/1.1" 200 None 2025-10-02 00:21:48,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/7446a144da7db207d65373456bf9347cc0a3dadb?per_page=1 HTTP/1.1" 200 None 2025-10-02 00:21:48,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/7446a144da7db207d65373456bf9347cc0a3dadb HTTP/1.1" 200 None 2025-10-02 00:21:49,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/7446a144da7db207d65373456bf9347cc0a3dadb/status HTTP/1.1" 200 None 2025-10-02 00:21:49,370 [ scc.repo] DEBUG - PR 635 will-moore 'Marshal annotations roi shape' 2025-10-02 00:21:49,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/629 HTTP/1.1" 200 None 2025-10-02 00:21:50,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/628 HTTP/1.1" 200 None 2025-10-02 00:21:50,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-10-02 00:21:51,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:21:51,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-02 00:21:52,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-10-02 00:21:52,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b8c7989c9900270d7cf27523f2649bbb903c7a60?per_page=1 HTTP/1.1" 200 None 2025-10-02 00:21:53,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-10-02 00:21:53,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/status HTTP/1.1" 200 None 2025-10-02 00:21:53,659 [ scc.repo] DEBUG - PR 628 jburel 'Add protocol required since Django4' 2025-10-02 00:21:54,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None 2025-10-02 00:21:54,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-10-02 00:21:55,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:21:55,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-02 00:21:56,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-10-02 00:21:56,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None 2025-10-02 00:21:57,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-10-02 00:21:57,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None 2025-10-02 00:21:57,769 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-10-02 00:21:58,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-10-02 00:21:58,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-10-02 00:21:59,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/189a10758bce63c40d0fe73d490cc489623a6ceb HTTP/1.1" 200 None 2025-10-02 00:21:59,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/189a10758bce63c40d0fe73d490cc489623a6ceb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:22:00,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/189a10758bce63c40d0fe73d490cc489623a6ceb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-02 00:22:00,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/189a10758bce63c40d0fe73d490cc489623a6ceb HTTP/1.1" 200 None 2025-10-02 00:22:01,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/189a10758bce63c40d0fe73d490cc489623a6ceb?per_page=1 HTTP/1.1" 200 None 2025-10-02 00:22:01,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/189a10758bce63c40d0fe73d490cc489623a6ceb HTTP/1.1" 200 None 2025-10-02 00:22:02,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/189a10758bce63c40d0fe73d490cc489623a6ceb/status HTTP/1.1" 200 None 2025-10-02 00:22:02,008 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-10-02 00:22:02,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-10-02 00:22:02,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-10-02 00:22:03,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-10-02 00:22:04,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:22:04,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-02 00:22:05,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-10-02 00:22:05,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-10-02 00:22:06,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-10-02 00:22:06,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-10-02 00:22:06,554 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-10-02 00:22:07,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-10-02 00:22:07,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-10-02 00:22:08,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-10-02 00:22:08,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:22:09,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-02 00:22:09,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-10-02 00:22:10,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-10-02 00:22:10,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-10-02 00:22:11,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-10-02 00:22:11,023 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-10-02 00:22:11,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-10-02 00:22:12,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-10-02 00:22:12,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:22:12,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-02 00:22:13,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-10-02 00:22:13,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-10-02 00:22:14,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-10-02 00:22:14,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-10-02 00:22:14,960 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-10-02 00:22:15,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-10-02 00:22:15,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-10-02 00:22:16,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-10-02 00:22:16,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:22:17,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-02 00:22:17,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-10-02 00:22:18,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-10-02 00:22:18,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-10-02 00:22:19,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-10-02 00:22:19,223 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-10-02 00:22:19,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-10-02 00:22:20,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-10-02 00:22:20,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-10-02 00:22:21,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:22:21,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-02 00:22:22,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-10-02 00:22:22,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-10-02 00:22:22,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-10-02 00:22:23,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-10-02 00:22:23,429 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-10-02 00:22:23,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-10-02 00:22:24,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-10-02 00:22:24,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-10-02 00:22:25,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-10-02 00:22:25,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-10-02 00:22:26,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:22:26,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-10-02 00:22:27,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-10-02 00:22:27,233 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-10-02 00:22:27,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-10-02 00:22:28,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-10-02 00:22:28,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-10-02 00:22:29,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:22:29,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-10-02 00:22:30,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-10-02 00:22:30,113 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-10-02 00:22:30,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-10-02 00:22:31,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-10-02 00:22:31,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-10-02 00:22:32,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-02 00:22:32,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-10-02 00:22:32,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06b0073db19eeccb9698860f75639084ad1b1200?per_page=1 HTTP/1.1" 200 2 2025-10-02 00:22:32,995 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler' 2025-10-02 00:22:32,996 [ scc.repo] DEBUG ## Branches found: 2025-10-02 00:22:32,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-10-02 00:22:32,996 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:22:32,996 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:22:32,999 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-02 00:22:33,001 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-02 00:22:33,001 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-02 00:22:33,004 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-02 00:22:33,007 [ scc.git] DEBUG Already up to date. 2025-10-02 00:22:33,007 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head' 2025-10-02 00:22:33,309 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-10-02 00:22:33,309 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD 2025-10-02 00:22:33,313 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-10-02 00:22:33,608 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-10-02 00:22:33,608 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-10-02 00:22:33,612 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-10-02 00:22:33,908 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-10-02 00:22:33,908 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-10-02 00:22:33,912 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-10-02 00:22:34,186 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-10-02 00:22:34,186 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-10-02 00:22:34,190 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-10-02 00:22:34,473 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-10-02 00:22:34,474 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-10-02 00:22:34,478 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-10-02 00:22:34,781 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-10-02 00:22:34,781 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-10-02 00:22:34,785 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-10-02 00:22:35,074 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-10-02 00:22:35,074 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-10-02 00:22:35,079 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-10-02 00:22:35,368 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-10-02 00:22:35,368 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-10-02 00:22:35,372 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-10-02 00:22:35,648 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-10-02 00:22:35,648 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-10-02 00:22:35,652 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head' 2025-10-02 00:22:35,928 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-10-02 00:22:35,928 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD 2025-10-02 00:22:35,933 [ scc.git] DEBUG Calling 'git fetch origin pull/628/head' 2025-10-02 00:22:36,205 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-10-02 00:22:36,205 [ scc.git] DEBUG * branch refs/pull/628/head -> FETCH_HEAD 2025-10-02 00:22:36,209 [ scc.git] DEBUG Calling 'git fetch origin pull/635/head' 2025-10-02 00:22:36,497 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-10-02 00:22:36,497 [ scc.git] DEBUG * branch refs/pull/635/head -> FETCH_HEAD 2025-10-02 00:22:36,501 [ scc.git] DEBUG ## Unique users: [] 2025-10-02 00:22:36,501 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:22:36,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:22:36,503 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06b0073db19eeccb9698860f75639084ad1b1200' 2025-10-02 00:22:36,510 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:22:36,512 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 06b0073db19eeccb9698860f75639084ad1b1200' 2025-10-02 00:22:36,529 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:22:36,533 [ scc.git] DEBUG omeroweb/templates/nginx-development.conf.template | 2 +- 2025-10-02 00:22:36,533 [ scc.git] DEBUG omeroweb/templates/nginx-location.conf.template | 3 ++- 2025-10-02 00:22:36,533 [ scc.git] DEBUG omeroweb/templates/nginx.conf.template | 2 +- 2025-10-02 00:22:36,533 [ scc.git] DEBUG test/unit/reference_templates/nginx-development-withoptions.conf | 2 +- 2025-10-02 00:22:36,533 [ scc.git] DEBUG test/unit/reference_templates/nginx-development.conf | 2 +- 2025-10-02 00:22:36,533 [ scc.git] DEBUG test/unit/reference_templates/nginx-location-withoptions.conf | 3 ++- 2025-10-02 00:22:36,533 [ scc.git] DEBUG test/unit/reference_templates/nginx-location.conf | 3 ++- 2025-10-02 00:22:36,533 [ scc.git] DEBUG test/unit/reference_templates/nginx-withoptions.conf | 2 +- 2025-10-02 00:22:36,533 [ scc.git] DEBUG test/unit/reference_templates/nginx.conf | 2 +- 2025-10-02 00:22:36,534 [ scc.git] DEBUG test/unit/test_web.py | 1 + 2025-10-02 00:22:36,534 [ scc.git] DEBUG 10 files changed, 13 insertions(+), 9 deletions(-) 2025-10-02 00:22:36,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:22:36,698 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-10-02 00:22:36,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:22:36,708 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-10-02 00:22:36,725 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-10-02 00:22:36,725 [ scc.git] DEBUG Auto-merging setup.py 2025-10-02 00:22:36,726 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:22:36,730 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-10-02 00:22:36,730 [ scc.git] DEBUG setup.py | 1 + 2025-10-02 00:22:36,730 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-10-02 00:22:37,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:22:37,103 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-10-02 00:22:37,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:22:37,112 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-10-02 00:22:37,131 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-10-02 00:22:37,131 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-10-02 00:22:37,132 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:22:37,136 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-10-02 00:22:37,136 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-10-02 00:22:37,136 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-10-02 00:22:37,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:22:37,491 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-10-02 00:22:37,498 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:22:37,500 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-10-02 00:22:37,518 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:22:37,522 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-10-02 00:22:37,522 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-02 00:22:37,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:22:37,896 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-10-02 00:22:37,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:22:37,905 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-10-02 00:22:37,923 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:22:37,926 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-10-02 00:22:37,926 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-10-02 00:22:38,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:22:38,309 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-10-02 00:22:38,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:22:38,319 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-10-02 00:22:38,338 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:22:38,342 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-10-02 00:22:38,342 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-10-02 00:22:38,342 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-10-02 00:22:38,342 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-10-02 00:22:38,342 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-10-02 00:22:38,342 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-10-02 00:22:38,342 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-10-02 00:22:38,342 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-10-02 00:22:38,342 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-10-02 00:22:38,342 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-10-02 00:22:38,342 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-10-02 00:22:38,342 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-10-02 00:22:38,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:22:38,699 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-10-02 00:22:38,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:22:38,708 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-10-02 00:22:38,731 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-10-02 00:22:38,732 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:22:38,737 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-10-02 00:22:38,738 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-10-02 00:22:38,738 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-10-02 00:22:38,738 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-10-02 00:22:39,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:22:39,090 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-10-02 00:22:39,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:22:39,099 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-10-02 00:22:39,117 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:22:39,120 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-10-02 00:22:39,120 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-10-02 00:22:39,121 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-10-02 00:22:39,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:22:39,480 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...189a10758bce63c40d0fe73d490cc489623a6ceb' 2025-10-02 00:22:39,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:22:39,491 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) 189a10758bce63c40d0fe73d490cc489623a6ceb' 2025-10-02 00:22:39,509 [ scc.git] DEBUG Auto-merging omeroweb/webclient/static/webclient/css/dusty.css 2025-10-02 00:22:39,510 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:22:39,514 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 2 +- 2025-10-02 00:22:39,514 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 43 +++++++++++++++++++++- 2025-10-02 00:22:39,514 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 +++++++++++----- 2025-10-02 00:22:39,514 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 + 2025-10-02 00:22:39,514 [ scc.git] DEBUG 4 files changed, 66 insertions(+), 12 deletions(-) 2025-10-02 00:22:39,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:22:39,881 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-10-02 00:22:39,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:22:39,890 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-10-02 00:22:39,909 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-10-02 00:22:39,910 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:22:39,913 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++----- 2025-10-02 00:22:39,913 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-) 2025-10-02 00:22:40,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:22:40,270 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-10-02 00:22:40,277 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:22:40,279 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 628 (Add protocol required since Django4) b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-10-02 00:22:40,297 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-10-02 00:22:40,298 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:22:40,301 [ scc.git] DEBUG omeroweb/settings.py | 4 ++-- 2025-10-02 00:22:40,301 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2025-10-02 00:22:40,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:22:40,674 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7446a144da7db207d65373456bf9347cc0a3dadb' 2025-10-02 00:22:40,682 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:22:40,684 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 635 (Marshal annotations roi shape) 7446a144da7db207d65373456bf9347cc0a3dadb' 2025-10-02 00:22:40,706 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-10-02 00:22:40,707 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-02 00:22:40,712 [ scc.git] DEBUG omeroweb/webclient/tree.py | 6 ++++++ 2025-10-02 00:22:40,712 [ scc.git] DEBUG omeroweb/webclient/views.py | 6 ++++++ 2025-10-02 00:22:40,712 [ scc.git] DEBUG 2 files changed, 12 insertions(+) 2025-10-02 00:22:41,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:22:41,077 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-02 00:22:41,114 [ scc.git] DEBUG Get sha1 of %s 2025-10-02 00:22:41,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-02 00:22:41,116 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-02 00:22:41,150 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-02 00:22:41,158 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd5134fb890> has no local changes 2025-10-02 00:22:41,158 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' - PR 635 will-moore 'Marshal annotations roi shape' Generated by OMERO-python-superbuild-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/535/)' 2025-10-02 00:22:41,165 [ scc.git] DEBUG [detached HEAD 1f683a957] merge master -Dorg -Ssuccess-only 2025-10-02 00:22:41,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-10-02 00:22:41,166 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-02 00:22:41,208 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-10-02 00:22:41,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:22:41,480 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-10-02 00:22:41,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:22:41,873 [ scc.config] DEBUG Found submodule.omero-py.url 2025-10-02 00:22:42,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:22:42,285 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-10-02 00:22:42,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:22:42,692 [ scc.config] DEBUG Found submodule.omero-web.url 2025-10-02 00:22:43,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-02 00:22:43,079 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-02 00:22:43,104 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd515b27c90> has local changes 2025-10-02 00:22:43,104 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 333 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `57934f0`' Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Updating 57934f0..a3dd99b Previously merged: - PR 87 lubianat 'Update README to match GitHub actions' Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 478 chris-allan 'Remove Python 2 compat from gateway utilities and scripts tests' - PR 482 sbesson 'omero.gateway: fix DetailsWrapper.getExternalInfo regression' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' - PR 635 will-moore 'Marshal annotations roi shape' Generated by OMERO-python-superbuild-push#535 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/535/)' 2025-10-02 00:22:43,110 [ scc.git] DEBUG [detached HEAD 3988f45] merge master -Dorg -Ssuccess-only 2025-10-02 00:22:43,110 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-10-02 00:22:43,111 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-10-02 00:22:43,111 [ scc.merge] INFO Already up to date. 2025-10-02 00:22:43,111 [ scc.merge] INFO 2025-10-02 00:22:43,111 [ scc.merge] INFO Merged PRs: 2025-10-02 00:22:43,111 [ scc.merge] INFO - PR 333 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `57934f0`' 2025-10-02 00:22:43,111 [ scc.merge] INFO 2025-10-02 00:22:43,111 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-10-02 00:22:43,111 [ scc.merge] INFO Already up to date. 2025-10-02 00:22:43,111 [ scc.merge] INFO 2025-10-02 00:22:43,111 [ scc.merge] INFO Merged PRs: 2025-10-02 00:22:43,111 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-10-02 00:22:43,111 [ scc.merge] INFO - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-02 00:22:43,111 [ scc.merge] INFO 2025-10-02 00:22:43,111 [ scc.merge] INFO Repository: ome/omero-marshal 2025-10-02 00:22:43,111 [ scc.merge] INFO Excluded PRs: 2025-10-02 00:22:43,111 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-10-02 00:22:43,111 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-10-02 00:22:43,111 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-10-02 00:22:43,111 [ scc.merge] INFO Updating 57934f0..a3dd99b 2025-10-02 00:22:43,111 [ scc.merge] INFO Previously merged: 2025-10-02 00:22:43,111 [ scc.merge] INFO - PR 87 lubianat 'Update README to match GitHub actions' 2025-10-02 00:22:43,111 [ scc.merge] INFO 2025-10-02 00:22:43,111 [ scc.merge] INFO Merged PRs: 2025-10-02 00:22:43,111 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-10-02 00:22:43,111 [ scc.merge] INFO 2025-10-02 00:22:43,111 [ scc.merge] INFO Repository: ome/omero-py 2025-10-02 00:22:43,111 [ scc.merge] INFO Excluded PRs: 2025-10-02 00:22:43,111 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric) 2025-10-02 00:22:43,111 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) 2025-10-02 00:22:43,111 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-10-02 00:22:43,111 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-10-02 00:22:43,111 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-10-02 00:22:43,111 [ scc.merge] INFO Already up to date. 2025-10-02 00:22:43,111 [ scc.merge] INFO 2025-10-02 00:22:43,111 [ scc.merge] INFO Merged PRs: 2025-10-02 00:22:43,111 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-10-02 00:22:43,111 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 478 chris-allan 'Remove Python 2 compat from gateway utilities and scripts tests' 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 482 sbesson 'omero.gateway: fix DetailsWrapper.getExternalInfo regression' 2025-10-02 00:22:43,112 [ scc.merge] INFO 2025-10-02 00:22:43,112 [ scc.merge] INFO Repository: ome/omero-scripts 2025-10-02 00:22:43,112 [ scc.merge] INFO Excluded PRs: 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-10-02 00:22:43,112 [ scc.merge] INFO Already up to date. 2025-10-02 00:22:43,112 [ scc.merge] INFO 2025-10-02 00:22:43,112 [ scc.merge] INFO Merged PRs: 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-10-02 00:22:43,112 [ scc.merge] INFO 2025-10-02 00:22:43,112 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-10-02 00:22:43,112 [ scc.merge] INFO 2025-10-02 00:22:43,112 [ scc.merge] INFO Repository: ome/omero-web 2025-10-02 00:22:43,112 [ scc.merge] INFO Excluded PRs: 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-10-02 00:22:43,112 [ scc.merge] INFO Already up to date. 2025-10-02 00:22:43,112 [ scc.merge] INFO 2025-10-02 00:22:43,112 [ scc.merge] INFO Merged PRs: 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4' 2025-10-02 00:22:43,112 [ scc.merge] INFO - PR 635 will-moore 'Marshal annotations roi shape' 2025-10-02 00:22:43,112 [ scc.merge] INFO 2025-10-02 00:22:43,112 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-10-02 00:22:43,112 [ scc.git] DEBUG Calling 'git remote' 2025-10-02 00:22:43,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-10-02 00:22:43,114 [ scc.git] DEBUG Calling 'git remote' 2025-10-02 00:22:43,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-10-02 00:22:43,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-10-02 00:22:43,116 [ scc.git] DEBUG Calling 'git remote' 2025-10-02 00:22:43,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-10-02 00:22:43,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-10-02 00:22:43,118 [ scc.git] DEBUG Calling 'git remote' 2025-10-02 00:22:43,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-10-02 00:22:43,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-10-02 00:22:43,120 [ scc.git] DEBUG Calling 'git remote' 2025-10-02 00:22:43,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-10-02 00:22:43,123 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-10-02 00:22:43,123 [ scc.git] DEBUG Calling 'git remote' 2025-10-02 00:22:43,124 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions error in omero_marshal setup command: 'tests_require' must be a string or list of strings containing valid project/version requirement specifiers; Parse error at "'://githu'": Expected string_end error in omero_marshal setup command: 'tests_require' must be a string or list of strings containing valid project/version requirement specifiers; Parse error at "'://githu'": Expected string_end Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 57934f0 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 780876c5 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 03b9116 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 2a7c4d2e3 nothing to commit, working tree clean HEAD detached from b68c3cf nothing to commit, working tree clean 2025-10-02 00:23:11,512 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS