at com.sun.proxy.$Proxy103.close(Unknown Source)
04:00:24 at ome.services.blitz.impl.AbstractCloseableAmdServant.close_async(AbstractCloseableAmdServant.java:90)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor594.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at omero.cmd.CallContext.invoke(CallContext.java:85)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy104.close_async(Unknown Source)
04:00:24 at omero.api._JobHandleTie.close_async(_JobHandleTie.java:144)
04:00:24 at omero.api._StatefulServiceInterfaceDisp.___close(_StatefulServiceInterfaceDisp.java:185)
04:00:24 at omero.api._JobHandleDisp.__dispatch(_JobHandleDisp.java:597)
04:00:24 at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24 at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24 at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24 at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24 serverExceptionClass = ome.conditions.SecurityViolation
04:00:24 message = User 4745 is not a member of group 3690 and cannot login
04:00:24}
04:00:24INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
04:00:24INFO omero.remote:decorators.py:75 Rslt: <class 'bool'>
04:00:24ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4746, group=3690, script=5018
04:00:24Traceback (most recent call last):
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
04:00:24 file, handle = self.lookup(scriptContext)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
04:00:24 file = prx.validateScript(job, self.accepts_list)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
04:00:24 return func(*args, **kwargs)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
04:00:24 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
04:00:24omero.ValidationException: exception ::omero::ValidationException
04:00:24{
04:00:24 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
04:00:24 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
04:00:24 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
04:00:24 at ome.services.util.Executor$Impl.execute(Executor.java:447)
04:00:24 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
04:00:24 at ome.services.throttling.Callback2.run(Callback2.java:43)
04:00:24 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
04:00:24 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
04:00:24 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor621.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at omero.cmd.CallContext.invoke(CallContext.java:85)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy105.validateScript_async(Unknown Source)
04:00:24 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
04:00:24 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
04:00:24 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
04:00:24 at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24 at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24 at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24 at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24 serverExceptionClass = ome.conditions.ValidationException
04:00:24 message = Found wrong number of files: []
04:00:24}
04:00:24INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
04:00:24INFO omero.remote:decorators.py:70 Meth: ProcessorI.parseJob
04:00:24INFO omero.processor.ProcessorI:processor.py:912 parseJob: Session = 1200365a-b0e3-4e23-a93b-724b3f3eee8e, JobId = 5018
04:00:24INFO omero.processor.ProcessorI:processor.py:1034 Using launcher: /home/omero/workspace/OMERO-test-integration/.venv3/bin/python3
04:00:24INFO omero.processor.ProcessorI:processor.py:1035 Using process:
04:00:24INFO omero.processor.ProcessI:processor.py:137 Created 1200365a-b0e3-4e23-a93b-724b3f3eee8e in /home/omero/omero/tmp/omero_omero/641817/processdyj8j4nh.dir
04:00:24INFO omero.remote:decorators.py:78 Excp: 'NoneType' object has no attribute 'add'
04:00:24WARNING omero.remote:decorators.py:82 <function ProcessorI.parseJob at 0x7f5df81a49d0> raised a non-ServerError (<class 'AttributeError'>): 'NoneType' object has no attribute 'add'
04:00:24INFO omero.processor.ProcessorI:__init__.py:597 Cleaning up
04:00:24INFO omero.processor.ProcessorI:__init__.py:599 Done
04:00:24_____________________________ TestScripts.test3527 _____________________________
04:00:24self = <test.integration.test_scripts.TestScripts object at 0x7f5dd149a610>
04:00:24 @pytest.mark.broken(ticket="11610")
04:00:24 def test3527(self):
04:00:24 SCRIPT = """if True:
04:00:24 import omero.scripts
04:00:24 import omero.rtypes
04:00:24 client = omero.scripts.client("ticket3527", \
04:00:24 omero.scripts.Long("gid", out=True))
04:00:24 ec = client.sf.getAdminService().getEventContext()
04:00:24 gid = ec.groupId
04:00:24 client.setOutput("gid", omero.rtypes.rlong(gid))
04:00:24 """
04:00:24 impl = omero.processor.usermode_processor(self.client)
04:00:24 svc = self.client.sf.getScriptService()
04:00:24 try:
04:00:24 scriptID = svc.uploadScript("/test/test3527", SCRIPT)
04:00:24> process = svc.runScript(scriptID, {}, None)
04:00:24test/integration/test_scripts.py:521:
04:00:24_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
04:00:24self = 42e63dd3-6ada-4515-9e36-beafcf6d9f40/2a224ca8-8075-4a78-822d-07cfca801e5bomero.api.IScript -t -e 1.1:tcp -h 172.18.0.10 -p 40741 -t 60000
04:00:24scriptID = 6267, inputs = {}, waitSecs = None, _ctx = None
04:00:24 def runScript(self, scriptID, inputs, waitSecs, _ctx=None):
04:00:24> return _M_omero.api.IScript._op_runScript.invoke(self, ((scriptID, inputs, waitSecs), _ctx))
04:00:24E omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable
04:00:24E {
04:00:24E serverStackTrace =
04:00:24E serverExceptionClass =
04:00:24E message = No processor available! [0 response(s)]
04:00:24E processorCount = 0
04:00:24E }
04:00:24../../../../.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py:935: NoProcessorAvailable
04:00:24------------------------------ Captured log call -------------------------------
04:00:24INFO omero.util.Resources:__init__.py:652 Starting
04:00:24INFO omero.processor.ProcessorI:processor.py:814 Registering processor ]Q|04E!\/M]^\'^}zt5VlU/UsermodeProcessor-2642c113-fb44-4630-856a-0def24420376 -t -e 1.1:tcp -h 127.0.0.1 -p 41675 -t 60000
04:00:24INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
04:00:24INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
04:00:24INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
04:00:24INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
04:00:24ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4745, group=3689, script=5019
04:00:24Traceback (most recent call last):
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
04:00:24 file, handle = self.lookup(scriptContext)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
04:00:24 file = prx.validateScript(job, self.accepts_list)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
04:00:24 return func(*args, **kwargs)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
04:00:24 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
04:00:24omero.ValidationException: exception ::omero::ValidationException
04:00:24{
04:00:24 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
04:00:24 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
04:00:24 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
04:00:24 at ome.services.util.Executor$Impl.execute(Executor.java:447)
04:00:24 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
04:00:24 at ome.services.throttling.Callback2.run(Callback2.java:43)
04:00:24 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
04:00:24 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
04:00:24 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor621.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at omero.cmd.CallContext.invoke(CallContext.java:85)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy105.validateScript_async(Unknown Source)
04:00:24 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
04:00:24 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
04:00:24 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
04:00:24 at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24 at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24 at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24 at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24 serverExceptionClass = ome.conditions.ValidationException
04:00:24 message = Found wrong number of files: []
04:00:24}
04:00:24INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
04:00:24ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4745, group=3689, script=5019
04:00:24Traceback (most recent call last):
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
04:00:24 file, handle = self.lookup(scriptContext)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
04:00:24 file = prx.validateScript(job, self.accepts_list)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
04:00:24 return func(*args, **kwargs)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
04:00:24 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
04:00:24omero.ValidationException: exception ::omero::ValidationException
04:00:24{
04:00:24 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
04:00:24 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
04:00:24 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
04:00:24 at ome.services.util.Executor$Impl.execute(Executor.java:447)
04:00:24 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
04:00:24 at ome.services.throttling.Callback2.run(Callback2.java:43)
04:00:24 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
04:00:24 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
04:00:24 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor621.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at omero.cmd.CallContext.invoke(CallContext.java:85)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy105.validateScript_async(Unknown Source)
04:00:24 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
04:00:24 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
04:00:24 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
04:00:24 at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24 at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24 at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24 at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24 serverExceptionClass = ome.conditions.ValidationException
04:00:24 message = Found wrong number of files: []
04:00:24}
04:00:24INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
04:00:24ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4745, group=3689, script=5019
04:00:24Traceback (most recent call last):
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
04:00:24 file, handle = self.lookup(scriptContext)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
04:00:24 file = prx.validateScript(job, self.accepts_list)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
04:00:24 return func(*args, **kwargs)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
04:00:24 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
04:00:24omero.ValidationException: exception ::omero::ValidationException
04:00:24{
04:00:24 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
04:00:24 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
04:00:24 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
04:00:24 at ome.services.util.Executor$Impl.execute(Executor.java:447)
04:00:24 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
04:00:24 at ome.services.throttling.Callback2.run(Callback2.java:43)
04:00:24 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
04:00:24 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
04:00:24 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor621.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at omero.cmd.CallContext.invoke(CallContext.java:85)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy105.validateScript_async(Unknown Source)
04:00:24 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
04:00:24 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
04:00:24 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
04:00:24 at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24 at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24 at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24 at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24 serverExceptionClass = ome.conditions.ValidationException
04:00:24 message = Found wrong number of files: []
04:00:24}
04:00:24INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
04:00:24ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4745, group=3689, script=5019
04:00:24Traceback (most recent call last):
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
04:00:24 file, handle = self.lookup(scriptContext)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
04:00:24 file = prx.validateScript(job, self.accepts_list)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
04:00:24 return func(*args, **kwargs)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
04:00:24 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
04:00:24omero.ValidationException: exception ::omero::ValidationException
04:00:24{
04:00:24 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
04:00:24 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
04:00:24 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
04:00:24 at ome.services.util.Executor$Impl.execute(Executor.java:447)
04:00:24 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
04:00:24 at ome.services.throttling.Callback2.run(Callback2.java:43)
04:00:24 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
04:00:24 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
04:00:24 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor621.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at omero.cmd.CallContext.invoke(CallContext.java:85)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy105.validateScript_async(Unknown Source)
04:00:24 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
04:00:24 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
04:00:24 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
04:00:24 at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24 at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24 at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24 at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24 serverExceptionClass = ome.conditions.ValidationException
04:00:24 message = Found wrong number of files: []
04:00:24}
04:00:24INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
04:00:24INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
04:00:24INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
04:00:24INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
04:00:24INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
04:00:24ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4745, group=3689, script=5020
04:00:24Traceback (most recent call last):
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
04:00:24 file, handle = self.lookup(scriptContext)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
04:00:24 file = prx.validateScript(job, self.accepts_list)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
04:00:24 return func(*args, **kwargs)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
04:00:24 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
04:00:24omero.ValidationException: exception ::omero::ValidationException
04:00:24{
04:00:24 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
04:00:24 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
04:00:24 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
04:00:24 at ome.services.util.Executor$Impl.execute(Executor.java:447)
04:00:24 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
04:00:24 at ome.services.throttling.Callback2.run(Callback2.java:43)
04:00:24 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
04:00:24 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
04:00:24 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor621.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at omero.cmd.CallContext.invoke(CallContext.java:85)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy105.validateScript_async(Unknown Source)
04:00:24 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
04:00:24 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
04:00:24 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
04:00:24 at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24 at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24 at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24 at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24 serverExceptionClass = ome.conditions.ValidationException
04:00:24 message = Found wrong number of files: []
04:00:24}
04:00:24ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4745, group=3689, script=5020
04:00:24Traceback (most recent call last):
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
04:00:24 file, handle = self.lookup(scriptContext)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
04:00:24 file = prx.validateScript(job, self.accepts_list)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
04:00:24 return func(*args, **kwargs)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
04:00:24 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
04:00:24omero.ValidationException: exception ::omero::ValidationException
04:00:24{
04:00:24 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
04:00:24 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
04:00:24 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
04:00:24 at ome.services.util.Executor$Impl.execute(Executor.java:447)
04:00:24 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
04:00:24 at ome.services.throttling.Callback2.run(Callback2.java:43)
04:00:24 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
04:00:24 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
04:00:24 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor621.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at omero.cmd.CallContext.invoke(CallContext.java:85)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy105.validateScript_async(Unknown Source)
04:00:24 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
04:00:24 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
04:00:24 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
04:00:24 at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24 at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24 at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24 at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24 serverExceptionClass = ome.conditions.ValidationException
04:00:24 message = Found wrong number of files: []
04:00:24}
04:00:24ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4745, group=3689, script=5020
04:00:24Traceback (most recent call last):
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
04:00:24 file, handle = self.lookup(scriptContext)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
04:00:24 file = prx.validateScript(job, self.accepts_list)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
04:00:24 return func(*args, **kwargs)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
04:00:24 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
04:00:24omero.ValidationException: exception ::omero::ValidationException
04:00:24{
04:00:24 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
04:00:24 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
04:00:24 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
04:00:24 at ome.services.util.Executor$Impl.execute(Executor.java:447)
04:00:24 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
04:00:24 at ome.services.throttling.Callback2.run(Callback2.java:43)
04:00:24 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
04:00:24 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
04:00:24 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor621.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at omero.cmd.CallContext.invoke(CallContext.java:85)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy105.validateScript_async(Unknown Source)
04:00:24 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
04:00:24 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
04:00:24 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
04:00:24 at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24 at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24 at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24 at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24 serverExceptionClass = ome.conditions.ValidationException
04:00:24 message = Found wrong number of files: []
04:00:24}
04:00:24INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
04:00:24INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
04:00:24INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
04:00:24ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4745, group=3689, script=5020
04:00:24Traceback (most recent call last):
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
04:00:24 file, handle = self.lookup(scriptContext)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
04:00:24 file = prx.validateScript(job, self.accepts_list)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
04:00:24 return func(*args, **kwargs)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
04:00:24 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
04:00:24omero.ValidationException: exception ::omero::ValidationException
04:00:24{
04:00:24 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
04:00:24 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
04:00:24 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
04:00:24 at ome.services.util.Executor$Impl.execute(Executor.java:447)
04:00:24 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
04:00:24 at ome.services.throttling.Callback2.run(Callback2.java:43)
04:00:24 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
04:00:24 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
04:00:24 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor621.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at omero.cmd.CallContext.invoke(CallContext.java:85)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy105.validateScript_async(Unknown Source)
04:00:24 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
04:00:24 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
04:00:24 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
04:00:24 at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24 at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24 at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24 at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24 serverExceptionClass = ome.conditions.ValidationException
04:00:24 message = Found wrong number of files: []
04:00:24}
04:00:24INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
04:00:24INFO omero.processor.ProcessorI:__init__.py:597 Cleaning up
04:00:24INFO omero.processor.ProcessorI:__init__.py:599 Done
04:00:24_______________ TestThumbnailPerms.testPrivate10618RootWithNoCtx _______________
04:00:24self = <test.integration.test_thumbnailPerms.TestThumbnailPerms object at 0x7f5dd1451490>
04:00:24 @pytest.mark.broken(reason="requires thumbnail work")
04:00:24 def testPrivate10618RootWithNoCtx(self):
04:00:24 """
04:00:24 This would require the server to try omero.group=-1
04:00:24 for the user.
04:00:24 """
04:00:24 group = self.new_group(perms="rw----")
04:00:24> self.assert10618(group, self.root, True)
04:00:24test/integration/test_thumbnailPerms.py:256:
04:00:24_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
04:00:24test/integration/test_thumbnailPerms.py:217: in assert10618
04:00:24 s = tb_prx.getThumbnailByLongestSideSet(rint(16), [pId], *ctx)
04:00:24_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
04:00:24self = a3d54ba1-c8ce-48e8-8cdc-07f6415cdd60/6b2a7ef3-c12b-427c-a9c4-6f422357cadeomero.api.ThumbnailStore -t -e 1.1:tcp -h 172.18.0.10 -p 40741 -t 60000
04:00:24size = object #0 (::omero::RInt)
04:00:24{
04:00:24 _val = 16
04:00:24}, pixelsIds = [2917]
04:00:24_ctx = None
04:00:24 def getThumbnailByLongestSideSet(self, size, pixelsIds, _ctx=None):
04:00:24> return _M_omero.api.ThumbnailStore._op_getThumbnailByLongestSideSet.invoke(self, ((size, pixelsIds), _ctx))
04:00:24E omero.ResourceError: exception ::omero::ResourceError
04:00:24E {
04:00:24E serverStackTrace = ome.conditions.ResourceError: Error retrieving Pixels id:2917. Pixels set does not exist or the user id:0 has insufficient permissions to retrieve it.
04:00:24E at ome.services.ThumbnailCtx.isExtendedGraphCritical(ThumbnailCtx.java:749)
04:00:24E at ome.services.ThumbnailCtx.createAndPrepareMissingRenderingSettings(ThumbnailCtx.java:388)
04:00:24E at ome.services.ThumbnailBean.getThumbnailByLongestSideSet(ThumbnailBean.java:1003)
04:00:24E at jdk.internal.reflect.GeneratedMethodAccessor3878.invoke(Unknown Source)
04:00:24E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24E at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
04:00:24E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24E at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:216)
04:00:24E at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:200)
04:00:24E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24E at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
04:00:24E at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
04:00:24E at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
04:00:24E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24E at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
04:00:24E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24E at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
04:00:24E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24E at com.sun.proxy.$Proxy113.getThumbnailByLongestSideSet(Unknown Source)
04:00:24E at jdk.internal.reflect.GeneratedMethodAccessor3878.invoke(Unknown Source)
04:00:24E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24E at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
04:00:24E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24E at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
04:00:24E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24E at com.sun.proxy.$Proxy113.getThumbnailByLongestSideSet(Unknown Source)
04:00:24E at jdk.internal.reflect.GeneratedMethodAccessor3914.invoke(Unknown Source)
04:00:24E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24E at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
04:00:24E at ome.services.throttling.Callback.run(Callback.java:56)
04:00:24E at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
04:00:24E at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
04:00:24E at ome.services.blitz.impl.ThumbnailStoreI.getThumbnailByLongestSideSet_async(ThumbnailStoreI.java:83)
04:00:24E at jdk.internal.reflect.GeneratedMethodAccessor3913.invoke(Unknown Source)
04:00:24E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24E at omero.cmd.CallContext.invoke(CallContext.java:85)
04:00:24E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24E at com.sun.proxy.$Proxy114.getThumbnailByLongestSideSet_async(Unknown Source)
04:00:24E at omero.api._ThumbnailStoreTie.getThumbnailByLongestSideSet_async(_ThumbnailStoreTie.java:132)
04:00:24E at omero.api._ThumbnailStoreDisp.___getThumbnailByLongestSideSet(_ThumbnailStoreDisp.java:743)
04:00:24E at omero.api._ThumbnailStoreDisp.__dispatch(_ThumbnailStoreDisp.java:1088)
04:00:24E at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24E at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24E at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24E at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24E at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24E at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24E at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24E at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24E
04:00:24E serverExceptionClass = ome.conditions.ResourceError
04:00:24E message = Error retrieving Pixels id:2917. Pixels set does not exist or the user id:0 has insufficient permissions to retrieve it.
04:00:24E }
04:00:24../../../../.venv3/lib64/python3.9/site-packages/omero_api_ThumbnailStore_ice.py:730: ResourceError
04:00:24___________________________ TestTickets2000.test1184 ___________________________
04:00:24self = <test.integration.test_tickets2000.TestTickets2000 object at 0x7f5dd14002e0>
04:00:24 @pytest.mark.broken(ticket="11543")
04:00:24 def test1184(self):
04:00:24 uuid = self.uuid()
04:00:24 client = self.new_client(perms="rw----")
04:00:24 query = client.sf.getQueryService()
04:00:24 update = client.sf.getUpdateService()
04:00:24 admin = client.sf.getAdminService()
04:00:24 cont = client.sf.getContainerService()
04:00:24 ds = self.new_dataset(name='test1184-ds-%s' % (uuid))
04:00:24 for i in range(1, 2001):
04:00:24 img = self.new_image(name='img1184-%s' % (uuid))
04:00:24 ds.linkImage(img)
04:00:24 ds = update.saveAndReturnObject(ds)
04:00:24 c = cont.getCollectionCount(
04:00:24 ds.__class__.__name__, ("imageLinks"), [ds.id.val], None)
04:00:24 assert c[ds.id.val] == 2000
04:00:24 page = 1
04:00:24 p = omero.sys.Parameters()
04:00:24 p.map = {}
04:00:24 p.map["eid"] = rlong(admin.getEventContext().userId)
04:00:24 p.map["oid"] = rlong(ds.id.val)
04:00:24 if page is not None:
04:00:24 f = omero.sys.Filter()
04:00:24 f.limit = rint(24)
04:00:24 f.offset = rint((int(page) - 1) * 24)
04:00:24 p.theFilter = f
04:00:24 sql = "select im from Image im join fetch im.details.owner " \
04:00:24 "join fetch im.details.group left outer join fetch " \
04:00:24 "im.datasetLinks dil left outer join fetch dil.parent d " \
04:00:24 "where d.id = :oid and im.details.owner.id=:eid " \
04:00:24 "order by im.id asc"
04:00:24 start = time.time()
04:00:24 res = query.findAllByQuery(sql, p)
04:00:24 assert 24 == len(res)
04:00:24 end = time.time()
04:00:24 elapsed = end - start
04:00:24> assert elapsed < 3.0, \
04:00:24 "Expected the test to complete in < 3 seconds, took: %f" % elapsed
04:00:24E AssertionError: Expected the test to complete in < 3 seconds, took: 10.878437
04:00:24E assert 10.878437042236328 < 3.0
04:00:24test/integration/test_tickets2000.py:370: AssertionError
04:00:24=============================== warnings summary ===============================
04:00:24../../../../.venv3/lib64/python3.9/site-packages/Ice.py:14
04:00:24 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/Ice.py:14: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses
04:00:24 import sys, string, imp, os, threading, warnings, datetime
04:00:24../../../../.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:241
04:00:24 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:241: RemovedInDjango50Warning: The default value of USE_TZ will change from False to True in Django 5.0. Set USE_TZ to False in your project settings if you want to keep the current default behavior.
04:00:24 warnings.warn(
04:00:24../../../../.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:289
04:00:24 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:289: RemovedInDjango51Warning: The STATICFILES_STORAGE setting is deprecated. Use STORAGES instead.
04:00:24 warnings.warn(STATICFILES_STORAGE_DEPRECATED_MSG, RemovedInDjango51Warning)
04:00:24OmeroPy/test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Dataset-test.fake--d]
04:00:24OmeroPy/test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Screen-SPW&plates=1&plateRows=1&plateCols=1&fields=1&plateAcqs=1.fake--r]
04:00:24 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/plugins/sessions.py:176: DeprecationWarning: OMERO_SESSION_DIR is deprecated. Use OMERO_SESSIONDIR instead.
04:00:24 warnings.warn(
04:00:24OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestHistory::testCreateHistory
04:00:24OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestHistory::testCreateHistory
04:00:24OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript
04:00:24OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript
04:00:24OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript
04:00:24 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:4810: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead
04:00:24 logger.warn("%s on %s to <%s> %s(%r, %r)",
04:00:24OmeroPy/test/integration/test_scripts.py::TestScripts::testParamLoadingPerformanceTicket2285
04:00:24OmeroPy/test/integration/test_scripts.py::TestScripts::testParamLoadingPerformanceTicket2285
04:00:24 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/decorators.py:82: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead
04:00:24 log.warn(
04:00:24OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testPrivate10618RootWithNoCtx
04:00:24 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/script_utils.py:1093: DeprecationWarning: tostring() is deprecated. Use tobytes() instead.
04:00:24 converted_plane = byte_swapped_plane.tostring()
04:00:24-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html04:00:24- generated xml file: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/target/reports/broken/junit-results.xml -
04:00:24=========================== short test summary info ============================
04:00:24FAILED test/integration/clitest/test_fs.py::TestFS::testRenameAdminOnly - AssertionError: assert False
04:00:24 + where False = <built-in method endswith of str object at 0x7f5db82c1490>('SecurityViolation: Admins only!\n')
04:00:24 + where <built-in method endswith of str object at 0x7f5db82c1490> = 'disabled since OMERO 5.4.7 due to Pixels.path bug\n'.endswith
04:00:24FAILED test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Dataset-test.fake--d] - omero.cli.NonZeroReturnCode: assert failed
04:00:24FAILED test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Screen-SPW&plates=1&plateRows=1&plateCols=1&fields=1&plateAcqs=1.fake--r] - omero.cli.NonZeroReturnCode: assert failed
04:00:24FAILED test/integration/gatewaytest/test_multi_group.py::TestHistory::testCreateHistory - AssertionError: Logs count should match number of objects
04:00:24assert 1 == 0
04:00:24FAILED test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript - omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable
04:00:24{
04:00:24 serverStackTrace =
04:00:24 serverExceptionClass =
04:00:24 message = No processor available! [0 response(s)]
04:00:24 processorCount = 0
04:00:24}
04:00:24FAILED test/integration/gatewaytest/test_performance.py::TestPerformance::testListFileAnnotations - AssertionError: Blitz listFileAnnotations() should be faster than getObjects('FileAnnotation')
04:00:24assert 0.23569297790527344 < 0.22303557395935059
04:00:24FAILED test/integration/gatewaytest/test_user.py::TestUser::testCrossGroupRead - assert not 2719 in [2718, 1, 2730, 2719, 2786]
04:00:24 + where 2719 = getId()
04:00:24 + where getId = <_ExperimenterGroupWrapper id=2719>.getId
04:00:24 + and [2718, 1, 2730, 2719, 2786] = object #0 (::omero::sys::EventContext)\n{\n shareId = -1\n sessionId = 10314\n sessionUuid = 58db9286-0156-47a3-8d39-eda6387110ad\n userId = 3728\n userName = weblitz_test_user\n sudoerId = <nil>\n sudoerName = <nil>\n groupId = 2718\n groupName = weblitz_test_user_group\n isAdmin = False\n adminPrivileges = \n {\n }\n eventId = -1\n eventType = Internal\n memberOfGroups = \n {\n [0] = 2718\n [1] = 1\n [2] = 2730\n [3] = 2719\n [4] = 2786\n }\n leaderOfGroups = \n {\n }\n groupPermissions = object #1 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -56\n }\n}.memberOfGroups
04:00:24 + where object #0 (::omero::sys::EventContext)\n{\n shareId = -1\n sessionId = 10314\n sessionUuid = 58db9286-0156-47a3-8d39-eda6387110ad\n userId = 3728\n userName = weblitz_test_user\n sudoerId = <nil>\n sudoerName = <nil>\n groupId = 2718\n groupName = weblitz_test_user_group\n isAdmin = False\n adminPrivileges = \n {\n }\n eventId = -1\n eventType = Internal\n memberOfGroups = \n {\n [0] = 2718\n [1] = 1\n [2] = 2730\n [3] = 2719\n [4] = 2786\n }\n leaderOfGroups = \n {\n }\n groupPermissions = object #1 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -56\n }\n} = getEventContext()
04:00:24 + where getEventContext = <omero.gateway._BlitzGateway object at 0x7f5db84109d0>.getEventContext
04:00:24 + where <omero.gateway._BlitzGateway object at 0x7f5db84109d0> = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f5dc4702c10>.gateway
04:00:24FAILED test/integration/scriptstest/test_ping.py::TestPing::testProcessCallback - assert 0 > 0
04:00:24 + where 0 = len([])
04:00:24 + where [] = object #0 (::omero::grid::ProcessCallback)\n{\n}.finish
04:00:24FAILED test/integration/scriptstest/test_repo.py::TestScriptRepo::testGetGroupScripts - assert 6251 in []
04:00:24FAILED test/integration/tablestest/test_service.py::TestTables::test2098 - AttributeError: type object 'path' has no attribute 'path'
04:00:24FAILED test/integration/tablestest/test_service.py::TestTables::testReadOnlyFile - AttributeError: 'TestTables' object has no attribute 'unique_dir'
04:00:24FAILED test/integration/tablestest/test_service.py::TestTables::testReadEqual - assert [1] == [1, 2, 3, 4, 5]
04:00:24 Right contains 4 more items, first extra item: 2
04:00:24 Full diff:
04:00:24 [
04:00:24 1,
04:00:24 - 2,
04:00:24 - 3,
04:00:24 - 4,
04:00:24 - 5,
04:00:24 ]
04:00:24FAILED test/integration/tablestest/test_service.py::TestTables::testReadOutOfRange - assert [4] == [-1, 0, 1, 2, 3, 4]
04:00:24 At index 0 diff: 4 != -1
04:00:24 Right contains 5 more items, first extra item: 0
04:00:24 Full diff:
04:00:24 [
04:00:24 - -1,
04:00:24 - 0,
04:00:24 - 1,
04:00:24 - 2,
04:00:24 - 3,
04:00:24 4,
04:00:24 ]
04:00:24FAILED test/integration/test_admin.py::TestAdmin::testChangePasswordWhenUnset - omero.SecurityViolation: exception ::omero::SecurityViolation
04:00:24{
04:00:24 serverStackTrace = ome.conditions.SecurityViolation: Old password is invalid
04:00:24 at ome.logic.AdminImpl.changePasswordWithOldPassword(AdminImpl.java:1253)
04:00:24 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
04:00:24 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
04:00:24 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy91.changePasswordWithOldPassword(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
04:00:24 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy91.changePasswordWithOldPassword(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
04:00:24 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
04:00:24 at ome.services.throttling.Callback.run(Callback.java:56)
04:00:24 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
04:00:24 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
04:00:24 at ome.services.blitz.impl.AdminI.changePasswordWithOldPassword_async(AdminI.java:144)
04:00:24 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
04:00:24 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at omero.cmd.CallContext.invoke(CallContext.java:85)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy92.changePasswordWithOldPassword_async(Unknown Source)
04:00:24 at omero.api._IAdminTie.changePasswordWithOldPassword_async(_IAdminTie.java:112)
04:00:24 at omero.api._IAdminDisp.___changePasswordWithOldPassword(_IAdminDisp.java:1977)
04:00:24 at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2229)
04:00:24 at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24 at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24 at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24 at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24 serverExceptionClass = ome.conditions.SecurityViolation
04:00:24 message = Old password is invalid
04:00:24}
04:00:24FAILED test/integration/test_admin.py::TestAdmin::test9193 - omero.ValidationException: exception ::omero::ValidationException
04:00:24{
04:00:24 serverStackTrace = ome.conditions.ValidationException: experimenter cannot be a member of only the 'user' group, a different default group is also required
04:00:24 at ome.logic.AdminImpl.removeGroups(AdminImpl.java:813)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor605.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
04:00:24 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy91.removeGroups(Unknown Source)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor605.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy91.removeGroups(Unknown Source)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor3266.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
04:00:24 at ome.services.throttling.Callback.run(Callback.java:56)
04:00:24 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
04:00:24 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
04:00:24 at ome.services.blitz.impl.AdminI.removeGroups_async(AdminI.java:318)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor3265.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at omero.cmd.CallContext.invoke(CallContext.java:85)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy92.removeGroups_async(Unknown Source)
04:00:24 at omero.api._IAdminTie.removeGroups_async(_IAdminTie.java:312)
04:00:24 at omero.api._IAdminDisp.___removeGroups(_IAdminDisp.java:1621)
04:00:24 at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2377)
04:00:24 at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24 at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24 at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24 at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24 serverExceptionClass = ome.conditions.ValidationException
04:00:24 message = experimenter cannot be a member of only the 'user' group, a different default group is also required
04:00:24}
04:00:24FAILED test/integration/test_files.py::TestFiles::testUploadDifferentSizeTicket2337 - omero.OptimisticLockException: exception ::omero::OptimisticLockException
04:00:24{
04:00:24 serverStackTrace = ome.conditions.OptimisticLockException: You are not authorized to change the update event for ome.model.core.OriginalFile:Id_6256 from ome.model.meta.Event:Id_125650 to ome.model.meta.Event:Id_125649
04:00:24You may need to reload the object before continuing.
04:00:24 at ome.security.basic.OmeroInterceptor.managedEvent(OmeroInterceptor.java:1201)
04:00:24 at ome.security.basic.OmeroInterceptor.checkManagedDetails(OmeroInterceptor.java:963)
04:00:24 at ome.security.basic.OmeroInterceptor.resetDetails(OmeroInterceptor.java:465)
04:00:24 at ome.security.basic.OmeroInterceptor.onFlushDirty(OmeroInterceptor.java:239)
04:00:24 at org.hibernate.event.def.DefaultFlushEntityEventListener.invokeInterceptor(DefaultFlushEntityEventListener.java:372)
04:00:24 at org.hibernate.event.def.DefaultFlushEntityEventListener.handleInterception(DefaultFlushEntityEventListener.java:349)
04:00:24 at org.hibernate.event.def.DefaultFlushEntityEventListener.scheduleUpdate(DefaultFlushEntityEventListener.java:287)
04:00:24 at org.hibernate.event.def.DefaultFlushEntityEventListener.onFlushEntity(DefaultFlushEntityEventListener.java:155)
04:00:24 at org.hibernate.event.def.AbstractFlushingEventListener.flushEntities(AbstractFlushingEventListener.java:219)
04:00:24 at org.hibernate.event.def.AbstractFlushingEventListener.flushEverythingToExecutions(AbstractFlushingEventListener.java:99)
04:00:24 at org.hibernate.event.def.DefaultFlushEventListener.onFlush(DefaultFlushEventListener.java:50)
04:00:24 at org.hibernate.impl.SessionImpl.flush(SessionImpl.java:1216)
04:00:24 at ome.logic.UpdateImpl.afterUpdate(UpdateImpl.java:342)
04:00:24 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:358)
04:00:24 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349)
04:00:24 at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor630.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
04:00:24 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy94.saveAndReturnObject(Unknown Source)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor630.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy94.saveAndReturnObject(Unknown Source)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor1061.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
04:00:24 at ome.services.throttling.Callback.run(Callback.java:56)
04:00:24 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
04:00:24 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
04:00:24 at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor1060.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at omero.cmd.CallContext.invoke(CallContext.java:85)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy95.saveAndReturnObject_async(Unknown Source)
04:00:24 at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92)
04:00:24 at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229)
04:00:24 at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423)
04:00:24 at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24 at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24 at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24 at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24 serverExceptionClass = ome.conditions.OptimisticLockException
04:00:24 message = You are not authorized to change the update event for ome.model.core.OriginalFile:Id_6256 from ome.model.meta.Event:Id_125650 to ome.model.meta.Event:Id_125649
04:00:24You may need to reload the object before continuing.
04:00:24 backOff = 0
04:00:24}
04:00:24FAILED test/integration/test_ishare.py::TestIShare::test1172 - assert 0 == 1
04:00:24 + where 0 = len([])
04:00:24FAILED test/integration/test_itimeline.py::TestITimeline::test1225 - assert 6 == 10
04:00:24 + where 6 = len({1908, 1944, 1995, 9687, 13309, 41717})
04:00:24FAILED test/integration/test_permissions.py::TestPermissions::test3136 - AssertionError: elapsed1=0.015839099884033203, elapsed2=0.01562976837158203
04:00:24assert 0.015839099884033203 < (0.1 * 0.01562976837158203)
04:00:24FAILED test/integration/test_permissions.py::TestPermissions::testSaveWithNegOneExplicit - omero.ApiUsageException: exception ::omero::ApiUsageException
04:00:24{
04:00:24 serverStackTrace = ome.conditions.ApiUsageException: No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context
04:00:24 at ome.model.internal.Permissions.<init>(Permissions.java:164)
04:00:24 at ome.security.basic.CurrentDetails.createDetails(CurrentDetails.java:439)
04:00:24 at ome.security.basic.OmeroInterceptor.newTransientDetails(OmeroInterceptor.java:700)
04:00:24 at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:187)
04:00:24 at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:413)
04:00:24 at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:292)
04:00:24 at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203)
04:00:24 at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.saveTransientEntity(DefaultMergeEventListener.java:415)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:341)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
04:00:24 at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
04:00:24 at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
04:00:24 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84)
04:00:24 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:73)
04:00:24 at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:867)
04:00:24 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:851)
04:00:24 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:855)
04:00:24 at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:313)
04:00:24 at ome.logic.UpdateImpl$2.run(UpdateImpl.java:138)
04:00:24 at ome.logic.UpdateImpl$2.run(UpdateImpl.java:135)
04:00:24 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:357)
04:00:24 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349)
04:00:24 at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor630.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
04:00:24 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy94.saveAndReturnObject(Unknown Source)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor630.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy94.saveAndReturnObject(Unknown Source)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor1061.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
04:00:24 at ome.services.throttling.Callback.run(Callback.java:56)
04:00:24 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
04:00:24 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
04:00:24 at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor1060.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at omero.cmd.CallContext.invoke(CallContext.java:85)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy95.saveAndReturnObject_async(Unknown Source)
04:00:24 at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92)
04:00:24 at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229)
04:00:24 at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423)
04:00:24 at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24 at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24 at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24 at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24 serverExceptionClass = ome.conditions.ApiUsageException
04:00:24 message = No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context
04:00:24}
04:00:24FAILED test/integration/test_permissions.py::TestPermissions::testSaveWithNegBadLink - omero.ApiUsageException: exception ::omero::ApiUsageException
04:00:24{
04:00:24 serverStackTrace = ome.conditions.ApiUsageException: No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context
04:00:24 at ome.model.internal.Permissions.<init>(Permissions.java:164)
04:00:24 at ome.security.basic.CurrentDetails.createDetails(CurrentDetails.java:439)
04:00:24 at ome.security.basic.OmeroInterceptor.newTransientDetails(OmeroInterceptor.java:700)
04:00:24 at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:187)
04:00:24 at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:413)
04:00:24 at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:292)
04:00:24 at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203)
04:00:24 at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.saveTransientEntity(DefaultMergeEventListener.java:415)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:341)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
04:00:24 at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
04:00:24 at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
04:00:24 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84)
04:00:24 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:73)
04:00:24 at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:867)
04:00:24 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:851)
04:00:24 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:855)
04:00:24 at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:313)
04:00:24 at ome.logic.UpdateImpl$2.run(UpdateImpl.java:138)
04:00:24 at ome.logic.UpdateImpl$2.run(UpdateImpl.java:135)
04:00:24 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:357)
04:00:24 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349)
04:00:24 at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor630.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
04:00:24 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy94.saveAndReturnObject(Unknown Source)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor630.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy94.saveAndReturnObject(Unknown Source)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor1061.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
04:00:24 at ome.services.throttling.Callback.run(Callback.java:56)
04:00:24 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
04:00:24 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
04:00:24 at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor1060.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at omero.cmd.CallContext.invoke(CallContext.java:85)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy95.saveAndReturnObject_async(Unknown Source)
04:00:24 at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92)
04:00:24 at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229)
04:00:24 at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423)
04:00:24 at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24 at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24 at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24 at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24 serverExceptionClass = ome.conditions.ApiUsageException
04:00:24 message = No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context
04:00:24}
04:00:24FAILED test/integration/test_permissions.py::TestPermissions::testSaveBadLink - omero.SecurityViolation: exception ::omero::SecurityViolation
04:00:24{
04:00:24 serverStackTrace = ome.conditions.SecurityViolation: You are not authorized to set the ExperimenterGroup for ome.model.annotations.TagAnnotation:Id_41872 to ome.model.meta.ExperimenterGroup:Id_3684
04:00:24 at ome.security.basic.OmeroInterceptor.newTransientDetails(OmeroInterceptor.java:785)
04:00:24 at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:187)
04:00:24 at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:413)
04:00:24 at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:292)
04:00:24 at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203)
04:00:24 at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.saveTransientEntity(DefaultMergeEventListener.java:415)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:341)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
04:00:24 at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
04:00:24 at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
04:00:24 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
04:00:24 at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:877)
04:00:24 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:859)
04:00:24 at org.hibernate.engine.CascadingAction$6.cascade(CascadingAction.java:279)
04:00:24 at org.hibernate.engine.Cascade.cascadeToOne(Cascade.java:392)
04:00:24 at org.hibernate.engine.Cascade.cascadeAssociation(Cascade.java:335)
04:00:24 at org.hibernate.engine.Cascade.cascadeProperty(Cascade.java:204)
04:00:24 at org.hibernate.engine.Cascade.cascade(Cascade.java:161)
04:00:24 at org.hibernate.event.def.AbstractSaveEventListener.cascadeBeforeSave(AbstractSaveEventListener.java:450)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:336)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
04:00:24 at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
04:00:24 at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
04:00:24 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
04:00:24 at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:877)
04:00:24 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:859)
04:00:24 at org.hibernate.engine.CascadingAction$6.cascade(CascadingAction.java:279)
04:00:24 at org.hibernate.engine.Cascade.cascadeToOne(Cascade.java:392)
04:00:24 at org.hibernate.engine.Cascade.cascadeAssociation(Cascade.java:335)
04:00:24 at org.hibernate.engine.Cascade.cascadeProperty(Cascade.java:204)
04:00:24 at org.hibernate.engine.Cascade.cascadeCollectionElements(Cascade.java:425)
04:00:24 at org.hibernate.engine.Cascade.cascadeCollection(Cascade.java:362)
04:00:24 at org.hibernate.engine.Cascade.cascadeAssociation(Cascade.java:338)
04:00:24 at org.hibernate.engine.Cascade.cascadeProperty(Cascade.java:204)
04:00:24 at org.hibernate.engine.Cascade.cascade(Cascade.java:161)
04:00:24 at org.hibernate.event.def.AbstractSaveEventListener.cascadeAfterSave(AbstractSaveEventListener.java:475)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:388)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
04:00:24 at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
04:00:24 at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
04:00:24 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
04:00:24 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84)
04:00:24 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:73)
04:00:24 at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:867)
04:00:24 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:851)
04:00:24 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:855)
04:00:24 at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:313)
04:00:24 at ome.logic.UpdateImpl$2.run(UpdateImpl.java:138)
04:00:24 at ome.logic.UpdateImpl$2.run(UpdateImpl.java:135)
04:00:24 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:357)
04:00:24 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349)
04:00:24 at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor630.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
04:00:24 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy94.saveAndReturnObject(Unknown Source)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor630.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy94.saveAndReturnObject(Unknown Source)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor1061.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
04:00:24 at ome.services.throttling.Callback.run(Callback.java:56)
04:00:24 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
04:00:24 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
04:00:24 at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor1060.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at omero.cmd.CallContext.invoke(CallContext.java:85)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy95.saveAndReturnObject_async(Unknown Source)
04:00:24 at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92)
04:00:24 at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229)
04:00:24 at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423)
04:00:24 at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24 at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24 at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24 at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24 serverExceptionClass = ome.conditions.SecurityViolation
04:00:24 message = You are not authorized to set the ExperimenterGroup for ome.model.annotations.TagAnnotation:Id_41872 to ome.model.meta.ExperimenterGroup:Id_3684
04:00:24}
04:00:24FAILED test/integration/test_permissions.py::TestPermissions::testUseOfRawFileBeanScriptReadCorrectGroupAndUser - Ice.UnknownException: exception ::Ice::UnknownException
04:00:24{
04:00:24 unknown = ome.conditions.SecurityViolation: User 4740 is not an admin and so cannot set uid to 0
04:00:24 at ome.security.basic.BasicEventContext.checkAndInitialize(BasicEventContext.java:141)
04:00:24 at ome.security.basic.CurrentDetails.checkAndInitialize(CurrentDetails.java:317)
04:00:24 at ome.security.basic.BasicSecuritySystem.loadEventContext(BasicSecuritySystem.java:449)
04:00:24 at ome.security.basic.EventHandler.doLogin(EventHandler.java:210)
04:00:24 at ome.security.basic.EventHandler.invoke(EventHandler.java:146)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
04:00:24 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
04:00:24 at ome.services.util.Executor$Impl.execute(Executor.java:447)
04:00:24 at ome.services.blitz.repo.RepositoryDaoImpl.getFile(RepositoryDaoImpl.java:866)
04:00:24 at ome.services.blitz.repo.PublicRepositoryI.checkId(PublicRepositoryI.java:823)
04:00:24 at ome.services.blitz.repo.PublicRepositoryI.fileById(PublicRepositoryI.java:367)
04:00:24 at omero.grid._RepositoryTie.fileById(_RepositoryTie.java:78)
04:00:24 at omero.grid._RepositoryDisp.___fileById(_RepositoryDisp.java:393)
04:00:24 at omero.grid._RepositoryDisp.__dispatch(_RepositoryDisp.java:538)
04:00:24 at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24 at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24 at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24 at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24}
04:00:24FAILED test/integration/test_rawfilestore.py::TestRFS::testTicket1961Basic - AssertionError: assert '' != ''
04:00:24 + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val
04:00:24 + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6257\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4741\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3686\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -120\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1734580726435\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash
04:00:24FAILED test/integration/test_rawfilestore.py::TestRFS::testTicket1961WithKillSession - AssertionError: assert '' != ''
04:00:24 + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val
04:00:24 + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6258\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4741\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3686\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -120\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1734580726507\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash
04:00:24FAILED test/integration/test_rawfilestore.py::TestRFS::testTicket2161Save - AssertionError: assert '' != ''
04:00:24 + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val
04:00:24 + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6259\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4741\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3686\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -120\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1734580726546\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash
04:00:24FAILED test/integration/test_rawfilestore.py::TestRFS::testNoWrite - AssertionError: assert '' != ''
04:00:24 + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val
04:00:24 + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6260\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4742\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3687\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -56\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1734580732064\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash
04:00:24FAILED test/integration/test_reporawfilestore.py::TestRepoRawFileStore::testFailedWriteNoFile - Failed: DID NOT RAISE <class 'omero.ResourceError'>
04:00:24FAILED test/integration/test_scripts.py::TestScripts::testAutoFillTicket2326 - omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable
04:00:24{
04:00:24 serverStackTrace =
04:00:24 serverExceptionClass =
04:00:24 message = No processor available! [0 response(s)]
04:00:24 processorCount = 0
04:00:24}
04:00:24FAILED test/integration/test_scripts.py::TestScripts::testParamLoadingPerformanceTicket2285 - omero.InternalException: exception ::omero::InternalException
04:00:24{
04:00:24 serverStackTrace = Traceback (most recent call last):
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/decorators.py", line 71, in exc_handler
04:00:24 rv = func(*args, **kwargs)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 921, in parseJob
04:00:24 prx, process = self.process(
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/decorators.py", line 31, in handler
04:00:24 return func(*args, **kwargs)
04:00:24 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 994, in process
04:00:24 self.resources.add(process)
04:00:24AttributeError: 'NoneType' object has no attribute 'add'
04:00:24 serverExceptionClass =
04:00:24 message = Internal exception
04:00:24}
04:00:24FAILED test/integration/test_scripts.py::TestScripts::test3527 - omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable
04:00:24{
04:00:24 serverStackTrace =
04:00:24 serverExceptionClass =
04:00:24 message = No processor available! [0 response(s)]
04:00:24 processorCount = 0
04:00:24}
04:00:24FAILED test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testPrivate10618RootWithNoCtx - omero.ResourceError: exception ::omero::ResourceError
04:00:24{
04:00:24 serverStackTrace = ome.conditions.ResourceError: Error retrieving Pixels id:2917. Pixels set does not exist or the user id:0 has insufficient permissions to retrieve it.
04:00:24 at ome.services.ThumbnailCtx.isExtendedGraphCritical(ThumbnailCtx.java:749)
04:00:24 at ome.services.ThumbnailCtx.createAndPrepareMissingRenderingSettings(ThumbnailCtx.java:388)
04:00:24 at ome.services.ThumbnailBean.getThumbnailByLongestSideSet(ThumbnailBean.java:1003)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor3878.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:216)
04:00:24 at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:200)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
04:00:24 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
04:00:24 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy113.getThumbnailByLongestSideSet(Unknown Source)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor3878.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy113.getThumbnailByLongestSideSet(Unknown Source)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor3914.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
04:00:24 at ome.services.throttling.Callback.run(Callback.java:56)
04:00:24 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
04:00:24 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
04:00:24 at ome.services.blitz.impl.ThumbnailStoreI.getThumbnailByLongestSideSet_async(ThumbnailStoreI.java:83)
04:00:24 at jdk.internal.reflect.GeneratedMethodAccessor3913.invoke(Unknown Source)
04:00:24 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
04:00:24 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
04:00:24 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
04:00:24 at omero.cmd.CallContext.invoke(CallContext.java:85)
04:00:24 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
04:00:24 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
04:00:24 at com.sun.proxy.$Proxy114.getThumbnailByLongestSideSet_async(Unknown Source)
04:00:24 at omero.api._ThumbnailStoreTie.getThumbnailByLongestSideSet_async(_ThumbnailStoreTie.java:132)
04:00:24 at omero.api._ThumbnailStoreDisp.___getThumbnailByLongestSideSet(_ThumbnailStoreDisp.java:743)
04:00:24 at omero.api._ThumbnailStoreDisp.__dispatch(_ThumbnailStoreDisp.java:1088)
04:00:24 at IceInternal.Incoming.invoke(Incoming.java:221)
04:00:24 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
04:00:24 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
04:00:24 at Ice.ConnectionI.message(ConnectionI.java:1056)
04:00:24 at IceInternal.ThreadPool.run(ThreadPool.java:395)
04:00:24 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
04:00:24 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
04:00:24 at java.base/java.lang.Thread.run(Thread.java:829)
04:00:24 serverExceptionClass = ome.conditions.ResourceError
04:00:24 message = Error retrieving Pixels id:2917. Pixels set does not exist or the user id:0 has insufficient permissions to retrieve it.
04:00:24}
04:00:24FAILED test/integration/test_tickets2000.py::TestTickets2000::test1184 - AssertionError: Expected the test to complete in < 3 seconds, took: 10.878437
04:00:24assert 10.878437042236328 < 3.0
04:00:24==== 33 failed, 3 passed, 2025 deselected, 13 warnings in 192.79s (0:03:12) ====
04:00:25!! 12/19/24 04:00:25.120 error: 4 communicators not destroyed during global destruction.
04:00:25Result: 1
04:00:2504:00:25BUILD SUCCESSFUL
04:00:25Total time: 3 minutes 14 seconds
04:00:25+ /home/omero/workspace/OMERO-test-integration/src/build.py -f components/tools/OmeroJava/build.xml -Dtestng.useDefaultListeners=true -Dtestreports.dir=target/reports/broken broken
04:00:25OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
04:00:25Buildfile: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/build.xml
04:00:25Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava...
04:00:2604:00:26testng-init:
04:00:26:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
04:00:26:: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
04:00:2804:00:28,551 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
04:00:2804:00:28,555 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - No custom configurators were discovered as a service.
04:00:2804:00:28,555 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
04:00:2804:00:28,558 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
04:00:2804:00:28,559 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
04:00:2804:00:28,559 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
04:00:2804:00:28,560 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
04:00:2804:00:28,560 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
04:00:2804:00:28,562 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
04:00:2804:00:28,562 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
04:00:2804:00:28,563 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
04:00:2804:00:28,564 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@1b560eb0 - Resource [logback.xml] occurs multiple times on the classpath.
04:00:2804:00:28,564 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@1b560eb0 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
04:00:2804:00:28,564 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@1b560eb0 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
04:00:2804:00:28,776 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
04:00:2804:00:28,776 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
04:00:2804:00:28,795 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
04:00:2804:00:28,797 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@9e02f84 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
04:00:2804:00:28,797 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@9e02f84 - Please move "immediateFlush" property into the enclosing appender.
04:00:2804:00:28,857 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@9e02f84 - Setting the "immediateFlush" property of the enclosing appender to true
04:00:2804:00:28,858 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
04:00:2804:00:28,858 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
04:00:2804:00:28,858 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
04:00:2804:00:28,858 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
04:00:2804:00:28,858 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
04:00:2804:00:28,858 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
04:00:2804:00:28,859 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1e6060f1 - End of configuration.
04:00:2804:00:28,861 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7e49ded - Registering current configuration as safe fallback point
04:00:2804:00:28,861 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 299 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
04:00:2804:00:28lifecycle.test-compile:
04:00:28Deleting: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/_omero_build_1383120901.tmp
04:00:28Deleting: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.xml
04:00:28:: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
04:00:28:: delivering :: omero#OmeroJava-test;working@bdaf9f08f5d1 :: 5.6.3-531-7a0bb90242-ice36-ice36 :: integration :: Thu Dec 19 04:00:25 UTC 2024
04:00:28 delivering ivy file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.xml
04:00:28:: publishing :: omero#OmeroJava-test
04:00:28 published OmeroJava-test to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-531-7a0bb90242-ice36-ice36.jar
04:00:28 published ivy to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-531-7a0bb90242-ice36-ice36.xml
04:00:2904:00:29broken:
04:00:29OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
04:00:2904:00:29,433 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
04:00:2904:00:29,436 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - No custom configurators were discovered as a service.
04:00:2904:00:29,436 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
04:00:2904:00:29,437 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
04:00:2904:00:29,438 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
04:00:2904:00:29,439 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
04:00:2904:00:29,440 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
04:00:2904:00:29,440 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
04:00:2904:00:29,440 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
04:00:2904:00:29,441 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
04:00:2904:00:29,441 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
04:00:2904:00:29,442 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@10e31a9a - Resource [logback.xml] occurs multiple times on the classpath.
04:00:2904:00:29,442 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@10e31a9a - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
04:00:2904:00:29,442 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@10e31a9a - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
04:00:2904:00:29,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
04:00:2904:00:29,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
04:00:2904:00:29,656 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
04:00:2904:00:29,657 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@131774fe - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
04:00:2904:00:29,657 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@131774fe - Please move "immediateFlush" property into the enclosing appender.
04:00:2904:00:29,683 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@131774fe - Setting the "immediateFlush" property of the enclosing appender to true
04:00:2904:00:29,684 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
04:00:2904:00:29,684 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
04:00:2904:00:29,684 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
04:00:2904:00:29,684 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
04:00:2904:00:29,684 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
04:00:2904:00:29,684 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
04:00:2904:00:29,685 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@158d2680 - End of configuration.
04:00:2904:00:29,685 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@77847718 - Registering current configuration as safe fallback point
04:00:2904:00:29,685 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 245 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
04:00:30Dec 19, 2024 4:00:30 AM ome.system.OmeroContext prepareRefresh
04:00:30INFO: Refreshing ome.system.OmeroContext@9fec931: startup date [Thu Dec 19 04:00:30 UTC 2024]; root of context hierarchy
04:00:31Dec 19, 2024 4:00:31 AM org.springframework.beans.factory.xml.XmlBeanDefinitionReader loadBeanDefinitions
04:00:31INFO: Loading XML bean definitions from class path resource [ome/config.xml]
04:02:10===============================================
04:02:10OmeroJava.integration
04:02:10Total tests run: 43, Passes: 2, Failures: 41, Skips: 0
04:02:10===============================================
04:02:11The tests failed.
04:02:1104:02:11BUILD SUCCESSFUL
04:02:11Total time: 1 minute 45 seconds
04:02:11+ deactivate
04:02:11+ '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
04:02:11+ PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
04:02:11+ export PATH
04:02:11+ unset _OLD_VIRTUAL_PATH
04:02:11+ '[' -n '' ']'
04:02:11+ '[' -n /bin/bash -o -n '' ']'
04:02:11+ hash -r
04:02:11+ '[' -n '' ']'
04:02:11+ unset VIRTUAL_ENV
04:02:11+ '[' '!' '' = nondestructive ']'
04:02:11+ unset -f deactivate
04:02:11Recording test results
04:02:12[Checks API] No suitable checks publisher found.
04:02:12TestNG Reports Processing: START
04:02:12Looking for TestNG results report in workspace using pattern: **/OmeroJava/target/reports/integration/*.xml
04:02:12Saving reports...
04:02:12Processing '/var/jenkins_home/jobs/OMERO-test-integration/builds/260/testng/testng-results.xml'
04:02:12TestNG Reports Processing: FINISH
04:02:12Finished: SUCCESS
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