![[Jenkins]](/jenkins/static/9ed1fe1f/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 213 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision e849d7220735d67c4a474051cc03805d0a822cde (refs/remotes/origin/master) Commit message: "Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1" > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f e849d7220735d67c4a474051cc03805d0a822cde # timeout=10 > git rev-list --no-walk e849d7220735d67c4a474051cc03805d0a822cde # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 185 [Pipeline] sh > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.3.2 cryptography-43.0.1 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-09-17 00:36:06,799 [ scc.config] DEBUG Found github.token 2024-09-17 00:36:06,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-17 00:36:07,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:36:07,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:36:07,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-17 00:36:07,787 [ scc.gh] DEBUG 4342 remaining from 5000 (Reset at 00:09 2024-09-17 00:36:07,788 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-17 00:36:07,792 [ scc.git] DEBUG Check current status 2024-09-17 00:36:07,793 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-17 00:36:07,796 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1 2024-09-17 00:36:07,796 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-17 00:36:07,835 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-09-17 00:36:07,838 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-09-17 00:36:07,843 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac) 2024-09-17 00:36:07,847 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-09-17 00:36:07,850 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f) 2024-09-17 00:36:07,855 [ scc.config] DEBUG Found remote.origin.url 2024-09-17 00:36:08,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-09-17 00:36:08,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-17 00:36:09,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-17 00:36:09,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-17 00:36:10,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-17 00:36:10,040 [ scc.git] DEBUG Resetting... 2024-09-17 00:36:10,040 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-17 00:36:10,046 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1 2024-09-17 00:36:10,047 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-17 00:36:10,100 [ scc.git] DEBUG Check current status 2024-09-17 00:36:10,101 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-17 00:36:10,105 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1 2024-09-17 00:36:10,105 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-17 00:36:10,147 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-09-17 00:36:10,149 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-09-17 00:36:10,153 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac) 2024-09-17 00:36:10,156 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-09-17 00:36:10,160 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f) 2024-09-17 00:36:10,161 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-17 00:36:10,161 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-17 00:36:10,161 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-17 00:36:10,161 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-17 00:36:10,161 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-17 00:36:10,161 [ scc.repo] DEBUG ## PRs found: 2024-09-17 00:36:10,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-09-17 00:36:10,451 [ scc.repo] DEBUG ## Branches found: 2024-09-17 00:36:10,451 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:36:10,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:36:10,455 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-17 00:36:10,459 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-17 00:36:10,459 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-17 00:36:10,464 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-17 00:36:10,469 [ scc.git] DEBUG Already up to date. 2024-09-17 00:36:10,469 [ scc.git] DEBUG ## Unique users: [] 2024-09-17 00:36:10,469 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:36:10,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:36:10,474 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-17 00:36:10,516 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:36:10,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:36:10,520 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-17 00:36:10,925 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8913d1fe20> has no local changes 2024-09-17 00:36:10,926 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/176/)' 2024-09-17 00:36:10,951 [ scc.git] DEBUG [detached HEAD d59c852] merge master -Dorg -Snone 2024-09-17 00:36:10,951 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-09-17 00:36:10,952 [ scc.merge] INFO Already up to date. 2024-09-17 00:36:10,952 [ scc.merge] INFO 2024-09-17 00:36:10,952 [ scc.merge] INFO 2024-09-17 00:36:10,952 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-17 00:36:10,952 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' From https://github.com/ome/omero-py 749a68ac..4fd72efa master -> origin/master * [new tag] v5.19.5 -> v5.19.5 Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-09-17 00:36:14,948 [ scc.config] DEBUG Found github.token 2024-09-17 00:36:14,951 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-17 00:36:15,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:36:15,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:36:15,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-17 00:36:15,909 [ scc.gh] DEBUG 4316 remaining from 5000 (Reset at 00:09 2024-09-17 00:36:15,910 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-17 00:36:15,915 [ scc.git] DEBUG Check current status 2024-09-17 00:36:15,915 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-17 00:36:15,919 [ scc.git] DEBUG d59c852 merge master -Dorg -Snone 2024-09-17 00:36:15,919 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-17 00:36:15,964 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-09-17 00:36:15,968 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-09-17 00:36:15,972 [ scc.git] DEBUG +4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa) 2024-09-17 00:36:15,976 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-09-17 00:36:15,979 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f) 2024-09-17 00:36:15,983 [ scc.config] DEBUG Found remote.origin.url 2024-09-17 00:36:15,983 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-09-17 00:36:15,985 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-09-17 00:36:16,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-09-17 00:36:16,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-17 00:36:17,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-17 00:36:17,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-17 00:36:18,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-17 00:36:18,025 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-17 00:36:18,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-09-17 00:36:18,072 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-17 00:36:18,076 [ scc.git] DEBUG Check current status 2024-09-17 00:36:18,076 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-17 00:36:18,080 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0 2024-09-17 00:36:18,080 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-17 00:36:18,122 [ scc.config] DEBUG Found remote.origin.url 2024-09-17 00:36:18,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2024-09-17 00:36:18,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-17 00:36:19,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-17 00:36:19,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-17 00:36:20,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-17 00:36:20,137 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-17 00:36:20,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-09-17 00:36:20,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-09-17 00:36:20,178 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-17 00:36:20,181 [ scc.git] DEBUG Check current status 2024-09-17 00:36:20,181 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-17 00:36:20,185 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312 2024-09-17 00:36:20,185 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-17 00:36:20,227 [ scc.config] DEBUG Found remote.origin.url 2024-09-17 00:36:20,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2024-09-17 00:36:21,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-17 00:36:21,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-17 00:36:21,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-17 00:36:22,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-17 00:36:22,278 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-17 00:36:22,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-09-17 00:36:22,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-09-17 00:36:22,321 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-17 00:36:22,324 [ scc.git] DEBUG Check current status 2024-09-17 00:36:22,325 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-17 00:36:22,332 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0 2024-09-17 00:36:22,332 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-17 00:36:22,376 [ scc.config] DEBUG Found remote.origin.url 2024-09-17 00:36:22,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2024-09-17 00:36:23,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-17 00:36:23,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-17 00:36:23,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-17 00:36:24,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-17 00:36:24,406 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-17 00:36:24,447 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-09-17 00:36:24,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-09-17 00:36:24,448 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-17 00:36:24,452 [ scc.git] DEBUG Check current status 2024-09-17 00:36:24,452 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-17 00:36:24,490 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-17 00:36:24,490 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-17 00:36:24,537 [ scc.config] DEBUG Found remote.origin.url 2024-09-17 00:36:24,537 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-09-17 00:36:24,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2024-09-17 00:36:25,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-17 00:36:25,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-17 00:36:26,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-17 00:36:26,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-17 00:36:26,609 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-17 00:36:26,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-09-17 00:36:26,650 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-09-17 00:36:26,650 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-17 00:36:26,654 [ scc.git] DEBUG Check current status 2024-09-17 00:36:26,655 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-17 00:36:26,717 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0 2024-09-17 00:36:26,717 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-17 00:36:26,761 [ scc.config] DEBUG Found remote.origin.url 2024-09-17 00:36:27,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2024-09-17 00:36:27,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-17 00:36:27,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-17 00:36:28,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-17 00:36:28,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-17 00:36:28,869 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-17 00:36:28,911 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-09-17 00:36:28,911 [ scc.git] DEBUG Resetting... 2024-09-17 00:36:28,911 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-17 00:36:28,917 [ scc.git] DEBUG HEAD is now at d59c852 merge master -Dorg -Snone 2024-09-17 00:36:28,917 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-17 00:36:28,979 [ scc.git] DEBUG Submodule path 'omero-py': checked out '749a68acfc7b1851c165ae75f2c118743d8b1e0d' 2024-09-17 00:36:28,988 [ scc.git] DEBUG Check current status 2024-09-17 00:36:28,988 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-17 00:36:28,992 [ scc.git] DEBUG d59c852 merge master -Dorg -Snone 2024-09-17 00:36:28,992 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-17 00:36:29,036 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-09-17 00:36:29,039 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-09-17 00:36:29,042 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac) 2024-09-17 00:36:29,047 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-09-17 00:36:29,050 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f) 2024-09-17 00:36:29,051 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-17 00:36:29,051 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-17 00:36:29,051 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-17 00:36:29,051 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-17 00:36:29,051 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-17 00:36:29,052 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-09-17 00:36:29,052 [ scc.repo] DEBUG ## PRs found: 2024-09-17 00:36:29,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-09-17 00:36:29,282 [ scc.repo] DEBUG ## Branches found: 2024-09-17 00:36:29,282 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:36:29,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:36:29,286 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-17 00:36:29,290 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-17 00:36:29,291 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-17 00:36:29,295 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-17 00:36:29,299 [ scc.git] DEBUG Already up to date. 2024-09-17 00:36:29,300 [ scc.git] DEBUG ## Unique users: [] 2024-09-17 00:36:29,300 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:36:29,300 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:36:29,303 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-17 00:36:29,347 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:36:29,347 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:36:29,352 [ scc.repo] DEBUG ## PRs found: 2024-09-17 00:36:29,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2024-09-17 00:36:30,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2024-09-17 00:36:30,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2024-09-17 00:36:31,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-09-17 00:36:31,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-17 00:36:32,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-09-17 00:36:32,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2024-09-17 00:36:32,492 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-09-17 00:36:32,492 [ scc.repo] DEBUG ## Branches found: 2024-09-17 00:36:32,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-09-17 00:36:32,493 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:36:32,493 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:36:32,498 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-17 00:36:32,502 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-17 00:36:32,502 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-17 00:36:32,508 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-17 00:36:32,514 [ scc.git] DEBUG Already up to date. 2024-09-17 00:36:32,514 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2024-09-17 00:36:32,871 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-09-17 00:36:32,872 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2024-09-17 00:36:32,876 [ scc.git] DEBUG ## Unique users: [] 2024-09-17 00:36:32,877 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:36:32,877 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:36:32,881 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-09-17 00:36:32,886 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:36:32,890 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-09-17 00:36:33,094 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2024-09-17 00:36:33,094 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2024-09-17 00:36:33,094 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2024-09-17 00:36:33,094 [ scc.git] DEBUG Auto-merging src/fsLists.py 2024-09-17 00:36:33,094 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2024-09-17 00:36:33,094 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2024-09-17 00:36:33,094 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2024-09-17 00:36:33,094 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2024-09-17 00:36:33,094 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2024-09-17 00:36:33,095 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-17 00:36:33,099 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2024-09-17 00:36:33,099 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2024-09-17 00:36:33,099 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2024-09-17 00:36:33,099 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2024-09-17 00:36:33,099 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2024-09-17 00:36:33,100 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2024-09-17 00:36:33,100 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2024-09-17 00:36:33,100 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2024-09-17 00:36:33,100 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2024-09-17 00:36:33,100 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2024-09-17 00:36:33,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:36:33,231 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-17 00:36:33,272 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:36:33,273 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:36:33,277 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-17 00:36:33,320 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-17 00:36:33,326 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f08cad7e2b0> has no local changes 2024-09-17 00:36:33,326 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/176/)' 2024-09-17 00:36:33,336 [ scc.git] DEBUG [detached HEAD a2371df] merge master -Dorg -Ssuccess-only 2024-09-17 00:36:33,337 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-09-17 00:36:33,337 [ scc.repo] DEBUG ## PRs found: 2024-09-17 00:36:33,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2024-09-17 00:36:34,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2024-09-17 00:36:34,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2024-09-17 00:36:35,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-09-17 00:36:35,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-17 00:36:36,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-09-17 00:36:36,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2024-09-17 00:36:36,587 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2024-09-17 00:36:37,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2024-09-17 00:36:37,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2024-09-17 00:36:37,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2024-09-17 00:36:38,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2024-09-17 00:36:38,370 [ scc.repo] DEBUG ## Branches found: 2024-09-17 00:36:38,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-09-17 00:36:38,371 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:36:38,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:36:38,375 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-17 00:36:38,379 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-17 00:36:38,379 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-17 00:36:38,384 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-17 00:36:38,389 [ scc.git] DEBUG Already up to date. 2024-09-17 00:36:38,390 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2024-09-17 00:36:38,786 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2024-09-17 00:36:38,787 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2024-09-17 00:36:38,791 [ scc.git] DEBUG ## Unique users: [] 2024-09-17 00:36:38,791 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:36:38,791 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:36:38,796 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-09-17 00:36:38,801 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:36:38,804 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-09-17 00:36:38,815 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2024-09-17 00:36:38,815 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-17 00:36:38,818 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2024-09-17 00:36:38,818 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2024-09-17 00:36:38,818 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2024-09-17 00:36:38,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:36:38,954 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-17 00:36:38,993 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:36:38,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:36:38,998 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-17 00:36:39,038 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-17 00:36:39,043 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f08c9cd4730> has no local changes 2024-09-17 00:36:39,044 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/176/)' 2024-09-17 00:36:39,051 [ scc.git] DEBUG [detached HEAD bb40493] merge master -Dorg -Ssuccess-only 2024-09-17 00:36:39,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-09-17 00:36:39,052 [ scc.repo] DEBUG ## PRs found: 2024-09-17 00:36:39,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2024-09-17 00:36:40,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None 2024-09-17 00:36:40,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None 2024-09-17 00:36:41,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2024-09-17 00:36:41,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2024-09-17 00:36:41,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-09-17 00:36:42,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-17 00:36:42,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-17 00:36:43,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-09-17 00:36:43,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2024-09-17 00:36:44,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-09-17 00:36:44,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2024-09-17 00:36:44,733 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2024-09-17 00:36:45,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2024-09-17 00:36:45,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2024-09-17 00:36:46,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2024-09-17 00:36:46,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-17 00:36:47,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-17 00:36:47,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2024-09-17 00:36:48,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-09-17 00:36:48,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-17 00:36:48,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-17 00:36:49,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-09-17 00:36:49,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2024-09-17 00:36:50,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-09-17 00:36:50,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2024-09-17 00:36:50,738 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2024-09-17 00:36:51,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2024-09-17 00:36:51,168 [ scc.repo] DEBUG # ... Exclude label: exclude 2024-09-17 00:36:51,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2024-09-17 00:36:52,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2024-09-17 00:36:52,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-09-17 00:36:52,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-17 00:36:53,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-09-17 00:36:53,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2024-09-17 00:36:53,979 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-09-17 00:36:54,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2024-09-17 00:36:54,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2024-09-17 00:36:55,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-09-17 00:36:55,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-17 00:36:56,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-17 00:36:56,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-09-17 00:36:57,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None 2024-09-17 00:36:57,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-09-17 00:36:58,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2024-09-17 00:36:58,075 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2024-09-17 00:36:58,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2024-09-17 00:36:58,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2024-09-17 00:36:59,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2024-09-17 00:36:59,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2024-09-17 00:37:00,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-09-17 00:37:00,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-17 00:37:01,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-09-17 00:37:01,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2 2024-09-17 00:37:01,777 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj' 2024-09-17 00:37:02,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None 2024-09-17 00:37:02,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-09-17 00:37:03,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-17 00:37:03,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-09-17 00:37:04,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2024-09-17 00:37:04,170 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-09-17 00:37:04,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None 2024-09-17 00:37:05,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None 2024-09-17 00:37:05,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-09-17 00:37:06,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-17 00:37:06,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-09-17 00:37:06,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2024-09-17 00:37:06,963 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2024-09-17 00:37:07,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2024-09-17 00:37:07,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2024-09-17 00:37:08,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-09-17 00:37:08,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-17 00:37:09,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-09-17 00:37:09,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2024-09-17 00:37:09,700 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2024-09-17 00:37:10,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2024-09-17 00:37:10,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2024-09-17 00:37:11,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2024-09-17 00:37:11,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2024-09-17 00:37:11,593 [ scc.repo] DEBUG ## Branches found: 2024-09-17 00:37:11,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-09-17 00:37:11,593 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:37:11,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:11,598 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-17 00:37:11,602 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-17 00:37:11,602 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-17 00:37:11,606 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-17 00:37:11,617 [ scc.git] DEBUG Updating 749a68ac..4fd72efa 2024-09-17 00:37:12,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/424 HTTP/1.1" 200 None 2024-09-17 00:37:12,216 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2024-09-17 00:37:12,583 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-09-17 00:37:12,583 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2024-09-17 00:37:12,588 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2024-09-17 00:37:12,914 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-09-17 00:37:12,914 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2024-09-17 00:37:12,919 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2024-09-17 00:37:13,304 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-09-17 00:37:13,304 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2024-09-17 00:37:13,308 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2024-09-17 00:37:13,628 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-09-17 00:37:13,628 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2024-09-17 00:37:13,634 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2024-09-17 00:37:13,958 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-09-17 00:37:13,959 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2024-09-17 00:37:13,963 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2024-09-17 00:37:14,268 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-09-17 00:37:14,268 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2024-09-17 00:37:14,273 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-09-17 00:37:14,726 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-09-17 00:37:14,726 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-09-17 00:37:14,731 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2024-09-17 00:37:15,105 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-09-17 00:37:15,105 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2024-09-17 00:37:15,110 [ scc.git] DEBUG ## Unique users: [] 2024-09-17 00:37:15,110 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:37:15,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:15,114 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-09-17 00:37:15,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:15,129 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-09-17 00:37:15,166 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2024-09-17 00:37:15,166 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2024-09-17 00:37:15,167 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-17 00:37:15,171 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2024-09-17 00:37:15,171 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2024-09-17 00:37:15,171 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2024-09-17 00:37:15,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:37:15,316 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-09-17 00:37:15,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:15,333 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-09-17 00:37:15,473 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-09-17 00:37:15,473 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2024-09-17 00:37:15,474 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-17 00:37:15,484 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2024-09-17 00:37:15,484 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2024-09-17 00:37:15,484 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2024-09-17 00:37:15,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:37:15,697 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-09-17 00:37:15,709 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:15,713 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-09-17 00:37:15,747 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2024-09-17 00:37:15,749 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-17 00:37:15,752 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2024-09-17 00:37:15,752 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2024-09-17 00:37:16,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:37:16,087 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2024-09-17 00:37:16,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:16,103 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2024-09-17 00:37:16,231 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2024-09-17 00:37:16,231 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2024-09-17 00:37:16,232 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-17 00:37:16,236 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2024-09-17 00:37:16,236 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2024-09-17 00:37:16,236 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2024-09-17 00:37:16,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:37:16,490 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-09-17 00:37:16,502 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:16,507 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-09-17 00:37:16,568 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-17 00:37:16,571 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2024-09-17 00:37:16,571 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2024-09-17 00:37:16,571 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2024-09-17 00:37:16,571 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2024-09-17 00:37:16,571 [ scc.git] DEBUG create mode 100644 connect.py 2024-09-17 00:37:16,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:37:16,885 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-09-17 00:37:16,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:16,901 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-09-17 00:37:16,939 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2024-09-17 00:37:16,941 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-17 00:37:16,944 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2024-09-17 00:37:16,944 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-09-17 00:37:17,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:37:17,270 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2024-09-17 00:37:17,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:17,286 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2024-09-17 00:37:17,354 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2024-09-17 00:37:17,355 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-17 00:37:17,359 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2024-09-17 00:37:17,359 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2024-09-17 00:37:17,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:37:17,667 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-09-17 00:37:17,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:17,683 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-09-17 00:37:17,752 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-09-17 00:37:17,764 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-17 00:37:17,771 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2024-09-17 00:37:17,771 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2024-09-17 00:37:18,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:37:18,045 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-17 00:37:18,083 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:37:18,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:18,087 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-17 00:37:18,123 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-17 00:37:18,132 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f08c9cd45b0> has no local changes 2024-09-17 00:37:18,132 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller) - PR 427 Rdornier 'Add fileset folder creation' (user: Rdornier) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Updating 749a68ac..4fd72efa Previously merged: - PR 424 DavidStirling 'Prevent hang on exit while omero.client keepalive is active' Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' Generated by OMERO-python-superbuild-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/176/)' 2024-09-17 00:37:18,139 [ scc.git] DEBUG [detached HEAD ffbf96ea] merge master -Dorg -Ssuccess-only 2024-09-17 00:37:18,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-09-17 00:37:18,140 [ scc.git] INFO Overriding base-branch from master to develop 2024-09-17 00:37:18,140 [ scc.repo] DEBUG ## PRs found: 2024-09-17 00:37:18,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-09-17 00:37:19,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-09-17 00:37:19,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-09-17 00:37:20,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-17 00:37:20,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-17 00:37:20,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-09-17 00:37:21,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-09-17 00:37:21,354 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-09-17 00:37:21,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-09-17 00:37:22,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-09-17 00:37:22,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-09-17 00:37:23,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-09-17 00:37:23,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-09-17 00:37:24,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-09-17 00:37:24,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-17 00:37:25,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-17 00:37:25,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-17 00:37:25,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-09-17 00:37:25,876 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-17 00:37:26,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-09-17 00:37:26,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-09-17 00:37:27,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-09-17 00:37:27,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-09-17 00:37:27,758 [ scc.repo] DEBUG ## Branches found: 2024-09-17 00:37:27,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-09-17 00:37:27,758 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:37:27,758 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:27,763 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-09-17 00:37:27,766 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-17 00:37:27,766 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-09-17 00:37:27,770 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-09-17 00:37:27,774 [ scc.git] DEBUG Already up to date. 2024-09-17 00:37:27,775 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-09-17 00:37:28,495 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-09-17 00:37:28,495 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-09-17 00:37:28,500 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-09-17 00:37:29,091 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-09-17 00:37:29,091 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-09-17 00:37:29,096 [ scc.git] DEBUG ## Unique users: [] 2024-09-17 00:37:29,096 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:37:29,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:29,101 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-17 00:37:29,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:29,110 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-17 00:37:29,291 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-09-17 00:37:29,291 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-09-17 00:37:29,291 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-17 00:37:29,292 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-17 00:37:29,297 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-17 00:37:29,302 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-17 00:37:29,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:37:29,435 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-17 00:37:29,442 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-17 00:37:29,448 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#176](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/176/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/176/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-09-17 00:37:29,452 [ scc.config] DEBUG Found github.token 2024-09-17 00:37:29,452 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-09-17 00:37:29,453 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-09-17 00:37:29,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:29,462 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-09-17 00:37:29,537 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-17 00:37:29,540 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-09-17 00:37:29,540 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-09-17 00:37:29,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:37:29,823 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-17 00:37:29,862 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:37:29,863 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:29,867 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-17 00:37:29,910 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-17 00:37:29,916 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f08c9d1dc40> has no local changes 2024-09-17 00:37:29,916 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/176/)' 2024-09-17 00:37:29,923 [ scc.git] DEBUG [detached HEAD c03db3f] merge master -Dorg -Ssuccess-only 2024-09-17 00:37:29,924 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-09-17 00:37:29,924 [ scc.repo] DEBUG ## PRs found: 2024-09-17 00:37:30,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2024-09-17 00:37:30,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None 2024-09-17 00:37:31,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None 2024-09-17 00:37:31,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-17 00:37:32,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-17 00:37:32,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None 2024-09-17 00:37:33,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None 2024-09-17 00:37:33,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None 2024-09-17 00:37:33,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None 2024-09-17 00:37:33,991 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results' 2024-09-17 00:37:34,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None 2024-09-17 00:37:34,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None 2024-09-17 00:37:35,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2024-09-17 00:37:35,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2024-09-17 00:37:36,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2024-09-17 00:37:36,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2024-09-17 00:37:37,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-09-17 00:37:37,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-17 00:37:38,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-17 00:37:38,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-09-17 00:37:38,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2024-09-17 00:37:39,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-09-17 00:37:39,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2024-09-17 00:37:39,767 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-09-17 00:37:40,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2024-09-17 00:37:40,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2024-09-17 00:37:41,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-09-17 00:37:41,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-17 00:37:42,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-17 00:37:42,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-09-17 00:37:43,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None 2024-09-17 00:37:43,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-09-17 00:37:44,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None 2024-09-17 00:37:44,060 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2024-09-17 00:37:44,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2024-09-17 00:37:44,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2024-09-17 00:37:45,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2024-09-17 00:37:45,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-17 00:37:46,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-17 00:37:46,449 [ scc.repo] DEBUG ## Branches found: 2024-09-17 00:37:46,449 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-09-17 00:37:46,449 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:37:46,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:46,455 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-17 00:37:46,459 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-17 00:37:46,459 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-17 00:37:46,463 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-17 00:37:46,467 [ scc.git] DEBUG Already up to date. 2024-09-17 00:37:46,468 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2024-09-17 00:37:47,750 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-09-17 00:37:47,750 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2024-09-17 00:37:47,755 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2024-09-17 00:37:48,122 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-09-17 00:37:48,122 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2024-09-17 00:37:48,127 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head' 2024-09-17 00:37:48,470 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-09-17 00:37:48,470 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD 2024-09-17 00:37:48,475 [ scc.git] DEBUG ## Unique users: [] 2024-09-17 00:37:48,475 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:37:48,476 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:48,480 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-09-17 00:37:48,487 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:48,492 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-09-17 00:37:48,676 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-09-17 00:37:48,676 [ scc.git] DEBUG Auto-merging setup.py 2024-09-17 00:37:48,677 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-17 00:37:48,681 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2024-09-17 00:37:48,681 [ scc.git] DEBUG setup.py | 1 + 2024-09-17 00:37:48,681 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2024-09-17 00:37:48,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:37:48,811 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-09-17 00:37:48,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:48,823 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-09-17 00:37:48,942 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2024-09-17 00:37:48,942 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-09-17 00:37:48,943 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-17 00:37:48,947 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2024-09-17 00:37:48,948 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2024-09-17 00:37:48,948 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2024-09-17 00:37:49,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:37:49,198 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc' 2024-09-17 00:37:49,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:49,209 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc' 2024-09-17 00:37:49,321 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-17 00:37:49,326 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++ 2024-09-17 00:37:49,326 [ scc.git] DEBUG 1 file changed, 6 insertions(+) 2024-09-17 00:37:49,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:37:49,574 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-17 00:37:49,613 [ scc.git] DEBUG Get sha1 of %s 2024-09-17 00:37:49,614 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-17 00:37:49,618 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-17 00:37:49,656 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-17 00:37:49,674 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f08c847d580> has no local changes 2024-09-17 00:37:49,674 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results' Generated by OMERO-python-superbuild-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/176/)' 2024-09-17 00:37:49,687 [ scc.git] DEBUG [detached HEAD 577926aaa] merge master -Dorg -Ssuccess-only 2024-09-17 00:37:49,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-09-17 00:37:49,687 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-17 00:37:49,734 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2024-09-17 00:37:49,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:37:49,976 [ scc.config] DEBUG Found submodule.omero-marshal.url 2024-09-17 00:37:50,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:37:50,361 [ scc.config] DEBUG Found submodule.omero-py.url 2024-09-17 00:37:50,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:37:50,767 [ scc.config] DEBUG Found submodule.omero-scripts.url 2024-09-17 00:37:51,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:37:51,151 [ scc.config] DEBUG Found submodule.omero-web.url 2024-09-17 00:37:51,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-17 00:37:51,533 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-17 00:37:51,560 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f08cbac2e20> has local changes 2024-09-17 00:37:51,560 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller) - PR 427 Rdornier 'Add fileset folder creation' (user: Rdornier) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Updating 749a68ac..4fd72efa Previously merged: - PR 424 DavidStirling 'Prevent hang on exit while omero.client keepalive is active' Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results' Generated by OMERO-python-superbuild-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/176/)' 2024-09-17 00:37:51,569 [ scc.git] DEBUG [detached HEAD 676f427] merge master -Dorg -Ssuccess-only 2024-09-17 00:37:51,570 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-09-17 00:37:51,570 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2024-09-17 00:37:51,570 [ scc.merge] INFO Already up to date. 2024-09-17 00:37:51,570 [ scc.merge] INFO 2024-09-17 00:37:51,570 [ scc.merge] INFO 2024-09-17 00:37:51,570 [ scc.merge] INFO Repository: ome/omero-dropbox 2024-09-17 00:37:51,570 [ scc.merge] INFO Already up to date. 2024-09-17 00:37:51,570 [ scc.merge] INFO 2024-09-17 00:37:51,570 [ scc.merge] INFO Merged PRs: 2024-09-17 00:37:51,570 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-09-17 00:37:51,570 [ scc.merge] INFO 2024-09-17 00:37:51,570 [ scc.merge] INFO Repository: ome/omero-marshal 2024-09-17 00:37:51,570 [ scc.merge] INFO Excluded PRs: 2024-09-17 00:37:51,570 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2024-09-17 00:37:51,571 [ scc.merge] INFO Already up to date. 2024-09-17 00:37:51,571 [ scc.merge] INFO 2024-09-17 00:37:51,571 [ scc.merge] INFO Merged PRs: 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2024-09-17 00:37:51,571 [ scc.merge] INFO 2024-09-17 00:37:51,571 [ scc.merge] INFO Repository: ome/omero-py 2024-09-17 00:37:51,571 [ scc.merge] INFO Excluded PRs: 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller) 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation' (user: Rdornier) 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2024-09-17 00:37:51,571 [ scc.merge] INFO Updating 749a68ac..4fd72efa 2024-09-17 00:37:51,571 [ scc.merge] INFO Previously merged: 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 424 DavidStirling 'Prevent hang on exit while omero.client keepalive is active' 2024-09-17 00:37:51,571 [ scc.merge] INFO 2024-09-17 00:37:51,571 [ scc.merge] INFO Merged PRs: 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2024-09-17 00:37:51,571 [ scc.merge] INFO 2024-09-17 00:37:51,571 [ scc.merge] INFO Repository: ome/omero-scripts 2024-09-17 00:37:51,571 [ scc.merge] INFO Excluded PRs: 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-09-17 00:37:51,571 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-09-17 00:37:51,572 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-09-17 00:37:51,572 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-09-17 00:37:51,572 [ scc.merge] INFO Already up to date. 2024-09-17 00:37:51,572 [ scc.merge] INFO 2024-09-17 00:37:51,572 [ scc.merge] INFO Merged PRs: 2024-09-17 00:37:51,572 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-09-17 00:37:51,572 [ scc.merge] INFO 2024-09-17 00:37:51,572 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-17 00:37:51,572 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-17 00:37:51,572 [ scc.merge] INFO 2024-09-17 00:37:51,572 [ scc.merge] INFO Repository: ome/omero-web 2024-09-17 00:37:51,572 [ scc.merge] INFO Excluded PRs: 2024-09-17 00:37:51,572 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT) 2024-09-17 00:37:51,572 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2024-09-17 00:37:51,572 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2024-09-17 00:37:51,572 [ scc.merge] INFO Already up to date. 2024-09-17 00:37:51,572 [ scc.merge] INFO 2024-09-17 00:37:51,572 [ scc.merge] INFO Merged PRs: 2024-09-17 00:37:51,572 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2024-09-17 00:37:51,572 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-09-17 00:37:51,572 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results' 2024-09-17 00:37:51,572 [ scc.merge] INFO 2024-09-17 00:37:51,572 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-17 00:37:51,573 [ scc.git] DEBUG Calling 'git remote' 2024-09-17 00:37:51,579 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-09-17 00:37:51,580 [ scc.git] DEBUG Calling 'git remote' 2024-09-17 00:37:51,584 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-09-17 00:37:51,584 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-09-17 00:37:51,584 [ scc.git] DEBUG Calling 'git remote' 2024-09-17 00:37:51,589 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-09-17 00:37:51,589 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-09-17 00:37:51,589 [ scc.git] DEBUG Calling 'git remote' 2024-09-17 00:37:51,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-09-17 00:37:51,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-09-17 00:37:51,594 [ scc.git] DEBUG Calling 'git remote' 2024-09-17 00:37:51,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-09-17 00:37:51,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-09-17 00:37:51,599 [ scc.git] DEBUG Calling 'git remote' 2024-09-17 00:37:51,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from a4307f4 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from cca4c2f nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 749a68ac nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 312afbe nothing to commit, working tree clean Entering 'omero-web' HEAD detached from da5b7d11f nothing to commit, working tree clean HEAD detached from e849d72 nothing to commit, working tree clean 2024-09-17 00:38:19,382 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS