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#14 280.8 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#14 280.8 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
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Downloaded from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (80 kB at 86 kB/s)
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Downloaded from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (4.3 MB at 1.5 MB/s)
#14 284.5 [[1;34mINFO[m]
#14 284.5 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mformats-gpl[0;1m ---[m
#14 284.5 [[1;34mINFO[m]
#14 284.5 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mformats-gpl[0;1m ---[m
#14 284.5 [[1;34mINFO[m]
#14 284.5 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 284.5 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 284.5 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 284.5 [[1;34mINFO[m] Storing buildNumber: 401586b872e6c83b5f59a66b1ddd2f65f5c0d7d2 at timestamp: 1746317632084
#14 284.5 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 284.5 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 284.5
#14 284.5 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 284.5 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 284.6 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 284.6 [[1;34mINFO[m]
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#14 284.6 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 284.6 [[1;34mINFO[m] Copying 2 resources
#14 284.6 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/formats-gpl/lib
#14 284.6 [[1;34mINFO[m] Copying 0 resource
#14 284.6 [[1;34mINFO[m] Copying 0 resource
#14 284.6 [[1;34mINFO[m]
#14 284.6 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mformats-gpl[0;1m ---[m
#14 284.6 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 284.6 [[1;34mINFO[m] Compiling 176 source files to /bio-formats-build/bioformats/components/formats-gpl/target/classes
#14 286.9 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Some input files use or override a deprecated API.
#14 286.9 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Recompile with -Xlint:deprecation for details.
#14 286.9 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Some input files use unchecked or unsafe operations.
#14 286.9 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Recompile with -Xlint:unchecked for details.
#14 286.9 [[1;34mINFO[m]
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#14 286.9 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 286.9 [[1;34mINFO[m] Copying 24 resources
#14 286.9 [[1;34mINFO[m]
#14 286.9 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mformats-gpl[0;1m ---[m
#14 286.9 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 286.9 [[1;34mINFO[m] Compiling 23 source files to /bio-formats-build/bioformats/components/formats-gpl/target/test-classes
#14 287.1 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java uses unchecked or unsafe operations.
#14 287.1 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: Recompile with -Xlint:unchecked for details.
#14 287.1 [[1;34mINFO[m]
#14 287.1 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mformats-gpl[0;1m ---[m
#14 287.1 [[1;34mINFO[m]
#14 287.1 [[1;34mINFO[m] -------------------------------------------------------
#14 287.1 [[1;34mINFO[m] T E S T S
#14 287.1 [[1;34mINFO[m] -------------------------------------------------------
#14 287.3 [[1;34mINFO[m] Running [1mTestSuite[m
#14 288.6 2025-05-04 00:13:56,126 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@232024b9 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 288.6 2025-05-04 00:13:56,130 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@6c2f1700 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 288.6 2025-05-04 00:13:56,188 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@4c9e9fb8 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 288.6 2025-05-04 00:13:56,188 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@9ec531 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 288.7 2025-05-04 00:13:56,243 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@29006752 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 288.7 2025-05-04 00:13:56,243 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@534243e4 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 288.8 2025-05-04 00:13:56,294 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@155d1021 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 288.8 2025-05-04 00:13:56,295 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@4bd2f0dc reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 288.8 2025-05-04 00:13:56,343 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@3e6f3bae reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 288.8 2025-05-04 00:13:56,344 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@7a94b64e reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 288.9 2025-05-04 00:13:56,404 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@72ba28ee reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 288.9 2025-05-04 00:13:56,405 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@3e134896 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 288.9 2025-05-04 00:13:56,449 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@59942b48 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 288.9 2025-05-04 00:13:56,450 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@1869f114 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 288.9 2025-05-04 00:13:56,492 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@3bcd426c reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 288.9 2025-05-04 00:13:56,492 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@5f14a673 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 289.2 [[1;34mINFO[m] [1;32mTests run: [0;1;32m99[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.878 s - in [1mTestSuite[m
#14 289.5 [[1;34mINFO[m]
#14 289.5 [[1;34mINFO[m] Results:
#14 289.5 [[1;34mINFO[m]
#14 289.5 [[1;34mINFO[m] [1;32mTests run: 99, Failures: 0, Errors: 0, Skipped: 0[m
#14 289.5 [[1;34mINFO[m]
#14 289.5 [[1;34mINFO[m]
#14 289.5 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-mdb-test)[m @ [36mformats-gpl[0;1m ---[m
#14 289.5 [[1;34mINFO[m]
#14 289.5 [[1;34mINFO[m] -------------------------------------------------------
#14 289.5 [[1;34mINFO[m] T E S T S
#14 289.5 [[1;34mINFO[m] -------------------------------------------------------
#14 289.7 [[1;34mINFO[m] Running [1mTestSuite[m
#14 290.1 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.404 s - in [1mTestSuite[m
#14 290.4 [[1;34mINFO[m]
#14 290.4 [[1;34mINFO[m] Results:
#14 290.4 [[1;34mINFO[m]
#14 290.4 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 290.4 [[1;34mINFO[m]
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#14 290.4 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-poi-test)[m @ [36mformats-gpl[0;1m ---[m
#14 290.4 [[1;34mINFO[m]
#14 290.4 [[1;34mINFO[m] -------------------------------------------------------
#14 290.4 [[1;34mINFO[m] T E S T S
#14 290.4 [[1;34mINFO[m] -------------------------------------------------------
#14 290.6 [[1;34mINFO[m] Running [1mTestSuite[m
#14 291.0 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.401 s - in [1mTestSuite[m
#14 291.3 [[1;34mINFO[m]
#14 291.3 [[1;34mINFO[m] Results:
#14 291.3 [[1;34mINFO[m]
#14 291.3 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 291.3 [[1;34mINFO[m]
#14 291.3 [[1;34mINFO[m]
#14 291.3 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-netcdf-test)[m @ [36mformats-gpl[0;1m ---[m
#14 291.3 [[1;34mINFO[m]
#14 291.3 [[1;34mINFO[m] -------------------------------------------------------
#14 291.3 [[1;34mINFO[m] T E S T S
#14 291.3 [[1;34mINFO[m] -------------------------------------------------------
#14 291.5 [[1;34mINFO[m] Running [1mTestSuite[m
#14 291.9 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.404 s - in [1mTestSuite[m
#14 292.2 [[1;34mINFO[m]
#14 292.2 [[1;34mINFO[m] Results:
#14 292.2 [[1;34mINFO[m]
#14 292.2 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 292.2 [[1;34mINFO[m]
#14 292.2 [[1;34mINFO[m]
#14 292.2 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mformats-gpl[0;1m ---[m
#14 292.2 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT.jar
#14 292.3 [[1;34mINFO[m]
#14 292.3 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m >>>[m
#14 292.3 [[1;34mINFO[m]
#14 292.3 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mformats-gpl[0;1m ---[m
#14 292.3 [[1;34mINFO[m]
#14 292.3 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 292.3 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 292.3 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 292.3 [[1;34mINFO[m] Storing buildNumber: 401586b872e6c83b5f59a66b1ddd2f65f5c0d7d2 at timestamp: 1746317639824
#14 292.3 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 292.3 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 292.3
#14 292.3 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 292.3 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 292.3 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 292.3 [[1;34mINFO[m]
#14 292.3 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m <<<[m
#14 292.3 [[1;34mINFO[m]
#14 292.3 [[1;34mINFO[m]
#14 292.3 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 292.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-sources.jar
#14 292.4 [[1;34mINFO[m]
#14 292.4 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 292.4 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-tests.jar
#14 292.4 [[1;34mINFO[m]
#14 292.4 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mformats-gpl[0;1m ---[m
#14 292.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#14 292.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#14 292.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT-sources.jar
#14 292.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT-tests.jar
#14 292.4 [[1;34mINFO[m]
#14 292.4 [[1;34mINFO[m] [1m----------------------< [0;36mome:bio-formats_plugins[0;1m >-----------------------[m
#14 292.4 [[1;34mINFO[m] [1mBuilding Bio-Formats Plugins for ImageJ 8.2.0-SNAPSHOT [17/24][m
#14 292.4 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 292.4 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom
#14 292.4 Progress (1): 4.1/7.9 kB
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#14 292.5 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar (2.5 MB at 20 MB/s)
#14 292.6 [[1;34mINFO[m]
#14 292.6 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 292.6 [[1;34mINFO[m]
#14 292.6 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 292.6 [[1;34mINFO[m]
#14 292.6 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 292.6 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 292.6 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 292.6 [[1;34mINFO[m] Storing buildNumber: 401586b872e6c83b5f59a66b1ddd2f65f5c0d7d2 at timestamp: 1746317640131
#14 292.6 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 292.6 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 292.6
#14 292.6 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 292.6 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 292.6 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 292.6 [[1;34mINFO[m]
#14 292.6 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 292.6 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 292.6 [[1;34mINFO[m] Copying 3 resources
#14 292.6 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-plugins/lib
#14 292.6 [[1;34mINFO[m] Copying 0 resource
#14 292.6 [[1;34mINFO[m] Copying 0 resource
#14 292.6 [[1;34mINFO[m]
#14 292.6 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 292.6 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 292.6 [[1;34mINFO[m] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/classes
#14 293.2 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Some input files use or override a deprecated API.
#14 293.2 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Recompile with -Xlint:deprecation for details.
#14 293.2 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#14 293.2 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: Recompile with -Xlint:unchecked for details.
#14 293.2 [[1;34mINFO[m]
#14 293.2 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 293.2 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 293.2 [[1;34mINFO[m] Copying 1 resource
#14 293.2 [[1;34mINFO[m]
#14 293.2 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 293.2 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 293.2 [[1;34mINFO[m] Compiling 3 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/test-classes
#14 293.3 [[1;34mINFO[m]
#14 293.3 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 293.3 [[1;34mINFO[m]
#14 293.3 [[1;34mINFO[m] -------------------------------------------------------
#14 293.3 [[1;34mINFO[m] T E S T S
#14 293.3 [[1;34mINFO[m] -------------------------------------------------------
#14 293.5 [[1;34mINFO[m] Running [1mTestSuite[m
#14 294.8 Warning: Data has too many channels for Colorized color mode
#14 294.8 Warning: Data has too many channels for Colorized color mode
#14 294.9 Warning: Data has too many channels for Colorized color mode
#14 294.9 Warning: Data has too many channels for Colorized color mode
#14 295.0 Warning: Data has too many channels for Colorized color mode
#14 295.0 Warning: Data has too many channels for Colorized color mode
#14 295.0 Warning: Data has too many channels for Colorized color mode
#14 295.1 Warning: Data has too many channels for Colorized color mode
#14 295.1 Warning: Data has too many channels for Composite color mode
#14 295.1 Warning: Data has too many channels for Composite color mode
#14 295.5 Warning: Data has too many channels for Composite color mode
#14 295.5 Warning: Data has too many channels for Composite color mode
#14 295.5 Warning: Data has too many channels for Composite color mode
#14 295.5 Warning: Data has too many channels for Composite color mode
#14 295.5 Warning: Data has too many channels for Composite color mode
#14 295.5 Warning: Data has too many channels for Composite color mode
#14 295.5 Warning: Data has too many channels for Composite color mode
#14 295.5 Warning: Data has too many channels for Composite color mode
#14 295.5 Warning: Data has too many channels for Composite color mode
#14 295.5 Warning: Data has too many channels for Composite color mode
#14 295.5 Warning: Data has too many channels for Composite color mode
#14 295.6 Warning: Data has too many channels for Composite color mode
#14 295.6 Warning: Data has too many channels for Composite color mode
#14 295.6 Warning: Data has too many channels for Composite color mode
#14 295.6 Warning: Data has too many channels for Composite color mode
#14 295.6 Warning: Data has too many channels for Composite color mode
#14 295.9 Warning: Data has too many channels for Composite color mode
#14 295.9 Warning: Data has too many channels for Composite color mode
#14 295.9 Warning: Data has too many channels for Composite color mode
#14 295.9 Warning: Data has too many channels for Composite color mode
#14 296.0 Warning: Data has too many channels for Composite color mode
#14 296.0 Warning: Data has too many channels for Composite color mode
#14 296.0 Warning: Data has too many channels for Composite color mode
#14 296.0 Warning: Data has too many channels for Composite color mode
#14 296.0 Warning: Data has too many channels for Composite color mode
#14 296.0 Warning: Data has too many channels for Composite color mode
#14 296.0 Warning: Data has too many channels for Composite color mode
#14 296.0 Warning: Data has too many channels for Composite color mode
#14 296.0 Warning: Data has too many channels for Composite color mode
#14 296.0 Warning: Data has too many channels for Composite color mode
#14 296.0 Warning: Data has too many channels for Composite color mode
#14 296.1 Warning: Data has too many channels for Composite color mode
#14 296.1 Warning: Data has too many channels for Composite color mode
#14 296.1 Warning: Data has too many channels for Composite color mode
#14 296.4 Warning: Data has too many channels for Composite color mode
#14 296.4 Warning: Data has too many channels for Composite color mode
#14 296.4 Warning: Data has too many channels for Composite color mode
#14 296.5 Warning: Data has too many channels for Composite color mode
#14 296.5 Warning: Data has too many channels for Composite color mode
#14 296.5 Warning: Data has too many channels for Composite color mode
#14 296.5 Warning: Data has too many channels for Composite color mode
#14 296.5 Warning: Data has too many channels for Composite color mode
#14 296.5 Warning: Data has too many channels for Composite color mode
#14 296.5 Warning: Data has too many channels for Composite color mode
#14 296.5 Warning: Data has too many channels for Composite color mode
#14 296.5 Warning: Data has too many channels for Composite color mode
#14 296.5 Warning: Data has too many channels for Composite color mode
#14 296.6 Warning: Data has too many channels for Composite color mode
#14 296.6 Warning: Data has too many channels for Composite color mode
#14 296.6 Warning: Data has too many channels for Composite color mode
#14 296.9 Warning: Data has too many channels for Composite color mode
#14 296.9 Warning: Data has too many channels for Composite color mode
#14 296.9 Warning: Data has too many channels for Composite color mode
#14 296.9 Warning: Data has too many channels for Composite color mode
#14 297.0 Warning: Data has too many channels for Composite color mode
#14 297.0 Warning: Data has too many channels for Composite color mode
#14 297.0 Warning: Data has too many channels for Composite color mode
#14 297.0 Warning: Data has too many channels for Composite color mode
#14 297.0 Warning: Data has too many channels for Composite color mode
#14 297.0 Warning: Data has too many channels for Composite color mode
#14 297.0 Warning: Data has too many channels for Composite color mode
#14 297.0 Warning: Data has too many channels for Composite color mode
#14 297.0 Warning: Data has too many channels for Composite color mode
#14 297.1 Warning: Data has too many channels for Composite color mode
#14 297.1 Warning: Data has too many channels for Composite color mode
#14 297.1 Warning: Data has too many channels for Composite color mode
#14 297.1 Warning: Data has too many channels for Custom color mode
#14 297.1 Warning: Data has too many channels for Custom color mode
#14 297.1 Warning: Data has too many channels for Custom color mode
#14 297.2 Warning: Data has too many channels for Custom color mode
#14 297.2 Warning: Data has too many channels for Custom color mode
#14 297.2 Warning: Data has too many channels for Custom color mode
#14 297.2 Warning: Data has too many channels for Custom color mode
#14 297.3 Warning: Data has too many channels for Custom color mode
#14 297.3 Warning: Data has too many channels for Default color mode
#14 297.3 Warning: Data has too many channels for Default color mode
#14 297.3 Warning: Data has too many channels for Default color mode
#14 297.3 Warning: Data has too many channels for Default color mode
#14 297.4 Warning: Data has too many channels for Default color mode
#14 297.4 Warning: Data has too many channels for Default color mode
#14 297.4 Warning: Data has too many channels for Default color mode
#14 297.4 Warning: Data has too many channels for Default color mode
#14 297.5 Warning: Data has too many channels for Default color mode
#14 297.5 Warning: Data has too many channels for Default color mode
#14 297.5 Warning: Data has too many channels for Default color mode
#14 297.5 Warning: Data has too many channels for Default color mode
#14 297.6 Warning: Data has too many channels for Default color mode
#14 297.6 Warning: Data has too many channels for Default color mode
#14 297.6 Warning: Data has too many channels for Default color mode
#14 297.6 Warning: Data has too many channels for Default color mode
#14 297.7 Warning: Data has too many channels for Grayscale color mode
#14 297.7 Warning: Data has too many channels for Grayscale color mode
#14 297.7 Warning: Data has too many channels for Grayscale color mode
#14 297.7 Warning: Data has too many channels for Grayscale color mode
#14 297.7 Warning: Data has too many channels for Grayscale color mode
#14 297.8 Warning: Data has too many channels for Grayscale color mode
#14 297.8 Warning: Data has too many channels for Grayscale color mode
#14 297.8 Warning: Data has too many channels for Grayscale color mode
#14 297.9 Warning: Data has too many channels for Colorized color mode
#14 297.9 Warning: Data has too many channels for Colorized color mode
#14 297.9 Warning: Data has too many channels for Colorized color mode
#14 298.5 Warning: Data has too many channels for Default color mode
#14 298.7 [[1;34mINFO[m] [1;32mTests run: [0;1;32m30[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 5.172 s - in [1mTestSuite[m
#14 299.0 [[1;34mINFO[m]
#14 299.0 [[1;34mINFO[m] Results:
#14 299.0 [[1;34mINFO[m]
#14 299.0 [[1;34mINFO[m] [1;32mTests run: 30, Failures: 0, Errors: 0, Skipped: 0[m
#14 299.0 [[1;34mINFO[m]
#14 299.0 [[1;34mINFO[m]
#14 299.0 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 299.0 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#14 299.1 [[1;34mINFO[m]
#14 299.1 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m >>>[m
#14 299.1 [[1;34mINFO[m]
#14 299.1 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 299.1 [[1;34mINFO[m]
#14 299.1 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 299.1 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 299.1 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 299.1 [[1;34mINFO[m] Storing buildNumber: 401586b872e6c83b5f59a66b1ddd2f65f5c0d7d2 at timestamp: 1746317646600
#14 299.1 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 299.1 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 299.1
#14 299.1 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 299.1 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 299.1 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 299.1 [[1;34mINFO[m]
#14 299.1 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m <<<[m
#14 299.1 [[1;34mINFO[m]
#14 299.1 [[1;34mINFO[m]
#14 299.1 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 299.1 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar
#14 299.1 [[1;34mINFO[m]
#14 299.1 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 299.1 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar
#14 299.1 [[1;34mINFO[m]
#14 299.1 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 299.1 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#14 299.1 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#14 299.1 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT-sources.jar
#14 299.1 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT-tests.jar
#14 299.1 [[1;34mINFO[m]
#14 299.1 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bio-formats-tools[0;1m >------------------------[m
#14 299.1 [[1;34mINFO[m] [1mBuilding Bio-Formats command line tools 8.2.0-SNAPSHOT [18/24][m
#14 299.1 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 299.1 [[1;34mINFO[m]
#14 299.1 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats-tools[0;1m ---[m
#14 299.1 [[1;34mINFO[m]
#14 299.1 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 299.1 [[1;34mINFO[m]
#14 299.1 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 299.1 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 299.1 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 299.2 [[1;34mINFO[m] Storing buildNumber: 401586b872e6c83b5f59a66b1ddd2f65f5c0d7d2 at timestamp: 1746317646691
#14 299.2 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 299.2 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 299.2
#14 299.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 299.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 299.2 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 299.2 [[1;34mINFO[m]
#14 299.2 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 299.2 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 299.2 [[1;34mINFO[m] Copying 0 resource
#14 299.2 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-tools/lib
#14 299.2 [[1;34mINFO[m] Copying 0 resource
#14 299.2 [[1;34mINFO[m] Copying 0 resource
#14 299.2 [[1;34mINFO[m]
#14 299.2 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 299.2 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 299.2 [[1;34mINFO[m] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/target/classes
#14 299.3 [[1;34mINFO[m]
#14 299.3 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 299.3 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 299.3 [[1;34mINFO[m] Copying 1 resource
#14 299.3 [[1;34mINFO[m]
#14 299.3 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 299.3 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 299.3 [[1;34mINFO[m] Compiling 1 source file to /bio-formats-build/bioformats/components/bio-formats-tools/target/test-classes
#14 299.5 [[1;34mINFO[m]
#14 299.5 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats-tools[0;1m ---[m
#14 299.5 [[1;34mINFO[m]
#14 299.5 [[1;34mINFO[m] -------------------------------------------------------
#14 299.5 [[1;34mINFO[m] T E S T S
#14 299.5 [[1;34mINFO[m] -------------------------------------------------------
#14 299.6 [[1;34mINFO[m] Running loci.formats.tools.[1mImageConverterTest[m
#14 389.1 [[1;34mINFO[m] [1;32mTests run: [0;1;32m55[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 89.43 s - in loci.formats.tools.[1mImageConverterTest[m
#14 389.4 [[1;34mINFO[m]
#14 389.4 [[1;34mINFO[m] Results:
#14 389.4 [[1;34mINFO[m]
#14 389.4 [[1;34mINFO[m] [1;32mTests run: 55, Failures: 0, Errors: 0, Skipped: 0[m
#14 389.4 [[1;34mINFO[m]
#14 389.4 [[1;34mINFO[m]
#14 389.4 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats-tools[0;1m ---[m
#14 389.4 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT.jar
#14 389.5 [[1;34mINFO[m]
#14 389.5 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m >>>[m
#14 389.5 [[1;34mINFO[m]
#14 389.5 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 389.5 [[1;34mINFO[m]
#14 389.5 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 389.5 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 389.5 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 389.5 [[1;34mINFO[m] Storing buildNumber: 401586b872e6c83b5f59a66b1ddd2f65f5c0d7d2 at timestamp: 1746317736999
#14 389.5 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 389.5 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 389.5
#14 389.5 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 389.5 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 389.5 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 389.5 [[1;34mINFO[m]
#14 389.5 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m <<<[m
#14 389.5 [[1;34mINFO[m]
#14 389.5 [[1;34mINFO[m]
#14 389.5 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 389.5 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-sources.jar
#14 389.5 [[1;34mINFO[m]
#14 389.5 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 389.5 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-tests.jar
#14 389.5 [[1;34mINFO[m]
#14 389.5 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats-tools[0;1m ---[m
#14 389.5 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#14 389.5 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#14 389.5 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT-sources.jar
#14 389.5 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.2.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT-tests.jar
#14 389.5 [[1;34mINFO[m]
#14 389.5 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bioformats_package[0;1m >-----------------------[m
#14 389.5 [[1;34mINFO[m] [1mBuilding bioformats_package bundle 8.2.0-SNAPSHOT [19/24][m
#14 389.5 [[1;34mINFO[m] [1m--------------------------------[ pom ]---------------------------------[m
#14 389.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.pom
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#14 389.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.jar
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#14 389.6 [[1;34mINFO[m]
#14 389.6 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbioformats_package[0;1m ---[m
#14 389.6 [[1;34mINFO[m]
#14 389.6 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbioformats_package[0;1m ---[m
#14 389.6 [[1;34mINFO[m]
#14 389.6 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbioformats_package[0;1m ---[m
#14 389.6 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 389.6 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 389.6 [[1;34mINFO[m] Storing buildNumber: 401586b872e6c83b5f59a66b1ddd2f65f5c0d7d2 at timestamp: 1746317737121
#14 389.6 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 389.6 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 389.6
#14 389.6 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 389.6 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 389.6 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 389.6 [[1;34mINFO[m]
#14 389.6 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbioformats_package[0;1m >>>[m
#14 389.6 [[1;34mINFO[m]
#14 389.6 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbioformats_package[0;1m ---[m
#14 389.6 [[1;34mINFO[m]
#14 389.6 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbioformats_package[0;1m ---[m
#14 389.6 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 389.6 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 389.6 [[1;34mINFO[m] Storing buildNumber: 401586b872e6c83b5f59a66b1ddd2f65f5c0d7d2 at timestamp: 1746317737144
#14 389.6 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 389.6 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 389.6
#14 389.6 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 389.6 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 389.6 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 389.6 [[1;34mINFO[m]
#14 389.6 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbioformats_package[0;1m <<<[m
#14 389.6 [[1;34mINFO[m]
#14 389.6 [[1;34mINFO[m]
#14 389.6 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbioformats_package[0;1m ---[m
#14 389.6 [[1;34mINFO[m]
#14 389.6 [[1;34mINFO[m] [1m--- [0;32mmaven-assembly-plugin:3.1.0:single[m [1m(make-assembly)[m @ [36mbioformats_package[0;1m ---[m
#14 389.6 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.pom
#14 389.6 Progress (1): 4.1/7.6 kB
Progress (1): 7.6 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.pom (7.6 kB at 292 kB/s)
#14 389.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.jar
#14 389.7 Progress (1): 4.1/123 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.jar (123 kB at 4.0 MB/s)
#14 389.8 [[1;34mINFO[m] Reading assembly descriptor: assembly.xml
#14 390.1 [[1;33mWARNING[m] The following patterns were never triggered in this artifact exclusion filter:
#14 390.1 o 'gov.nih.imagej:imagej'
#14 390.1 o 'net.imagej:ij'
#14 390.1 o 'org.springframework:spring*'
#14 390.1 o 'aopalliance:aopalliance'
#14 390.1 o 'org.aspectj:aspectj*'
#14 390.1 o 'org.slf4j:slf4j-log4j12'
#14 390.1 o 'log4j:log4j'
#14 390.1 o 'org.testng:testng'
#14 390.1 o 'com.beust:jcommander'
#14 390.1 o 'org.beanshell:bsh'
#14 390.1 o 'edu.princeton.cup:java-cup'
#14 390.1 o 'org.apache.bcel:bcel'
#14 390.1 o 'regexp:regexp'
#14 390.1 o 'org.apache.ant:ant-trax'
#14 390.1 o 'edu.ucar:udunits'
#14 390.1 o 'javax.servlet:servlet-api'
#14 390.1
#14 390.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/5.1.8/maven-bundle-plugin-5.1.8.pom
#14 390.1 Progress (1): 4.1/11 kB
Progress (1): 8.2/11 kB
Progress (1): 11 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/5.1.8/maven-bundle-plugin-5.1.8.pom (11 kB at 398 kB/s)
#14 390.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/felix-parent/7/felix-parent-7.pom
#14 390.1 Progress (1): 4.1/21 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/felix/felix-parent/7/felix-parent-7.pom (21 kB at 781 kB/s)
#14 390.2 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.core/6.0.0/org.osgi.core-6.0.0.pom
#14 390.2 Progress (1): 1.1 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.core/6.0.0/org.osgi.core-6.0.0.pom (1.1 kB at 43 kB/s)
#14 390.2 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/biz.aQute.bndlib/6.3.1/biz.aQute.bndlib-6.3.1.pom
#14 390.2 Progress (1): 4.1/5.2 kB
Progress (1): 5.2 kB
Downloaded from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/biz.aQute.bndlib/6.3.1/biz.aQute.bndlib-6.3.1.pom (5.2 kB at 202 kB/s)
#14 390.2 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.dto/1.0.0/org.osgi.dto-1.0.0.pom
#14 390.2 Progress (1): 1.3 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osg
#14 390.2 [output clipped, log limit 2MiB reached]
#14 507.9 SLF4J: No SLF4J providers were found.
#14 507.9 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 507.9 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 DONE 515.0s
#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.0s
#16 [12/13] RUN ant jars tools
#16 1.096 Buildfile: /bio-formats-build/bioformats/build.xml
#16 1.579 [echo] isSnapshot = true
#16 1.699
#16 1.699 copy-jars:
#16 1.699
#16 1.699 deps-formats-api:
#16 1.789 [echo] isSnapshot = true
#16 1.856
#16 1.856 install-pom:
#16 2.043 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/pom-bio-formats-8.2.0-SNAPSHOT.pom
#16 2.254 [resolver:install] Installing ome:pom-bio-formats:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 2.258 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 2.260
#16 2.260 jar-formats-api:
#16 2.393 [echo] isSnapshot = true
#16 2.554
#16 2.554 init-title:
#16 2.554 [echo] ----------=========== formats-api ===========----------
#16 2.554
#16 2.554 init-timestamp:
#16 2.562
#16 2.562 init:
#16 2.562
#16 2.562 copy-resources:
#16 2.563 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.577 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.580
#16 2.580 compile:
#16 2.780 [resolver:resolve] Resolving artifacts
#16 2.808 [javac] Compiling 54 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 3.065 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 3.766 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.766 [javac] import loci.common.ReflectedUniverse;
#16 3.766 [javac] ^
#16 3.966 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.966 [javac] int currentIndex = r.getCoreIndex();
#16 3.966 [javac] ^
#16 3.966 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.966 [javac] r.setCoreIndex(coreIndex);
#16 3.966 [javac] ^
#16 3.966 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.967 [javac] r.setCoreIndex(currentIndex);
#16 3.967 [javac] ^
#16 4.167 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.167 [javac] public void setCoreIndex(int no) {
#16 4.167 [javac] ^
#16 4.167 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.167 [javac] public int getCoreIndex() {
#16 4.167 [javac] ^
#16 4.167 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.167 [javac] public int coreIndexToSeries(int index)
#16 4.167 [javac] ^
#16 4.168 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.168 [javac] public int seriesToCoreIndex(int series)
#16 4.168 [javac] ^
#16 4.168 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.168 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 4.168 [javac] ^
#16 4.268 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.268 [javac] if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 4.268 [javac] ^
#16 4.268 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.268 [javac] if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 4.268 [javac] ^
#16 4.268 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.269 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 4.269 [javac] ^
#16 4.269 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.269 [javac] core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 4.269 [javac] ^
#16 4.369 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.369 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 4.369 [javac] ^
#16 4.369 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.369 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 4.369 [javac] ^
#16 4.470 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.470 [javac] public void setCoreIndex(int no) {
#16 4.470 [javac] ^
#16 4.470 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.470 [javac] public int getCoreIndex() {
#16 4.470 [javac] ^
#16 4.470 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.470 [javac] public int coreIndexToSeries(int index) {
#16 4.470 [javac] ^
#16 4.470 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.470 [javac] public int seriesToCoreIndex(int series) {
#16 4.470 [javac] ^
#16 4.471 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.471 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 4.471 [javac] ^
#16 4.471 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.471 [javac] return getReader().getCoreMetadataList();
#16 4.471 [javac] ^
#16 4.471 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.471 [javac] return getReader().getCoreIndex();
#16 4.471 [javac] ^
#16 4.471 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.471 [javac] getReader().setCoreIndex(no);
#16 4.471 [javac] ^
#16 4.471 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.471 [javac] return getReader().seriesToCoreIndex(series);
#16 4.471 [javac] ^
#16 4.472 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.472 [javac] return getReader().coreIndexToSeries(index);
#16 4.472 [javac] ^
#16 4.572 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.572 [javac] public void setCoreIndex(int no) {
#16 4.572 [javac] ^
#16 4.572 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.572 [javac] public int getCoreIndex() {
#16 4.572 [javac] ^
#16 4.572 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.572 [javac] public int coreIndexToSeries(int index) {
#16 4.572 [javac] ^
#16 4.573 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.573 [javac] public int seriesToCoreIndex(int series) {
#16 4.573 [javac] ^
#16 4.573 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.573 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 4.573 [javac] ^
#16 4.573 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.573 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 4.573 [javac] ^
#16 4.573 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.573 [javac] return reader.getCoreIndex();
#16 4.573 [javac] ^
#16 4.573 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.573 [javac] reader.setCoreIndex(no);
#16 4.573 [javac] ^
#16 4.573 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.573 [javac] return reader.seriesToCoreIndex(series);
#16 4.574 [javac] ^
#16 4.574 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.574 [javac] return reader.coreIndexToSeries(index);
#16 4.574 [javac] ^
#16 4.774 [javac] Note: Some input files use unchecked or unsafe operations.
#16 4.774 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 4.774 [javac] 36 warnings
#16 4.800
#16 4.800 formats-api.jar:
#16 4.800 [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 4.825 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 4.862 [resolver:install] Using default POM (ome:formats-api:8.2.0-SNAPSHOT)
#16 4.866 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.pom
#16 4.921 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.jar
#16 4.923 [resolver:install] Installing ome:formats-api:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 4.925 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 4.926
#16 4.926 deps-turbojpeg:
#16 4.926
#16 4.926 jar-turbojpeg:
#16 5.036 [echo] isSnapshot = true
#16 5.199
#16 5.199 init-title:
#16 5.199 [echo] ----------=========== turbojpeg ===========----------
#16 5.199
#16 5.199 init-timestamp:
#16 5.199
#16 5.199 init:
#16 5.199
#16 5.199 copy-resources:
#16 5.200 [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 5.201
#16 5.201 compile:
#16 5.212 [resolver:resolve] Resolving artifacts
#16 5.215 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 5.418 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 6.119 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [deprecation] finalize() in Object has been deprecated
#16 6.119 [javac] protected void finalize() throws Throwable {
#16 6.119 [javac] ^
#16 6.119 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [deprecation] finalize() in Object has been deprecated
#16 6.119 [javac] super.finalize();
#16 6.119 [javac] ^
#16 6.119 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [deprecation] finalize() in Object has been deprecated
#16 6.119 [javac] protected void finalize() throws Throwable {
#16 6.119 [javac] ^
#16 6.119 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [deprecation] finalize() in Object has been deprecated
#16 6.119 [javac] super.finalize();
#16 6.119 [javac] ^
#16 6.170 [javac] 5 warnings
#16 6.171
#16 6.171 jar:
#16 6.176 [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 6.373 [resolver:install] Using default POM (ome:turbojpeg:8.2.0-SNAPSHOT)
#16 6.383 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.pom
#16 6.386 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar
#16 6.389 [resolver:install] Installing ome:turbojpeg:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 6.393 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 6.394
#16 6.394 deps-formats-bsd:
#16 6.394
#16 6.394 jar-formats-bsd:
#16 6.522 [echo] isSnapshot = true
#16 6.665
#16 6.665 init-title:
#16 6.665 [echo] ----------=========== formats-bsd ===========----------
#16 6.665
#16 6.665 init-timestamp:
#16 6.666
#16 6.666 init:
#16 6.666
#16 6.666 copy-resources:
#16 6.666 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.669 [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.670
#16 6.670 compile:
#16 6.888 [resolver:resolve] Resolving artifacts
#16 6.917 [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 7.126 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 8.227 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 8.227 [javac] import loci.common.ReflectedUniverse;
#16 8.227 [javac] ^
#16 8.628 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.628 [javac] core.size() != reader.getCoreMetadataList().size())
#16 8.628 [javac] ^
#16 8.628 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.628 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 8.628 [javac] ^
#16 8.628 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.628 [javac] int n = reader.getCoreMetadataList().size();
#16 8.628 [javac] ^
#16 8.628 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 8.628 [javac] reader.setCoreIndex(coreIndex);
#16 8.628 [javac] ^
#16 8.628 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.628 [javac] int n = reader.getCoreMetadataList().size();
#16 8.628 [javac] ^
#16 8.628 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.628 [javac] int n = reader.getCoreMetadataList().size();
#16 8.628 [javac] ^
#16 8.628 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 8.628 [javac] if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 8.628 [javac] ^
#16 8.628 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.628 [javac] int n = reader.getCoreMetadataList().size();
#16 8.628 [javac] ^
#16 8.628 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 8.629 [javac] if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 8.629 [javac] ^
#16 8.629 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.629 [javac] int n = reader.getCoreMetadataList().size();
#16 8.629 [javac] ^
#16 8.629 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 8.629 [javac] if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 8.629 [javac] ^
#16 8.629 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 8.629 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 8.629 [javac] ^
#16 8.629 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 8.629 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 8.629 [javac] ^
#16 8.629 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.629 [javac] return noStitch ? reader.getCoreMetadataList() : core;
#16 8.629 [javac] ^
#16 8.729 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.729 [javac] if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 8.729 [javac] ^
#16 8.729 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.729 [javac] seriesCount = reader.getCoreMetadataList().size();
#16 8.729 [javac] ^
#16 8.729 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.729 [javac] if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 8.729 [javac] ^
#16 8.729 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.729 [javac] if (reader.getCoreMetadataList().size() > 1) return 0;
#16 8.729 [javac] ^
#16 8.730 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.730 [javac] r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 8.730 [javac] ^
#16 8.830 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.830 [javac] int seriesCount = unwrap().getCoreMetadataList().size();
#16 8.830 [javac] ^
#16 8.930 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 8.930 [javac] BitWriter out = new BitWriter();
#16 8.930 [javac] ^
#16 8.930 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 8.930 [javac] BitWriter out = new BitWriter();
#16 8.930 [javac] ^
#16 9.031 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 9.031 [javac] return new Double(v);
#16 9.031 [javac] ^
#16 9.732 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2106: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 9.732 [javac] return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#16 9.732 [javac] ^
#16 9.732 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2113: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 9.732 [javac] return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#16 9.732 [javac] ^
#16 9.732 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2120: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 9.732 [javac] return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#16 9.732 [javac] ^
#16 9.932 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 9.932 [javac] channelNames.put(new Integer(channelNames.size()), value);
#16 9.932 [javac] ^
#16 10.13 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:618: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.13 [javac] OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 10.13 [javac] ^
#16 10.23 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 10.23 [javac] StreamTokenizer st = new StreamTokenizer(in);
#16 10.23 [javac] ^
#16 10.33 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.33 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 10.33 [javac] ^
#16 10.33 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 10.33 [javac] protected ReflectedUniverse r;
#16 10.33 [javac] ^
#16 10.33 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 10.33 [javac] r = new ReflectedUniverse();
#16 10.33 [javac] ^
#16 10.43 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1043: warning: [deprecation] NM in UNITS has been deprecated
#16 10.43 [javac] wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 10.43 [javac] ^
#16 10.43 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1075: warning: [deprecation] MM in UNITS has been deprecated
#16 10.43 [javac] sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 10.43 [javac] ^
#16 10.43 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1088: warning: [deprecation] MM in UNITS has been deprecated
#16 10.43 [javac] String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 10.43 [javac] ^
#16 10.43 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1089: warning: [deprecation] MM in UNITS has been deprecated
#16 10.43 [javac] String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 10.43 [javac] ^
#16 10.43 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1108: warning: [deprecation] MM in UNITS has been deprecated
#16 10.43 [javac] volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 10.43 [javac] ^
#16 10.43 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1112: warning: [deprecation] MM in UNITS has been deprecated
#16 10.44 [javac] volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 10.44 [javac] ^
#16 10.44 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1118: warning: [deprecation] MM in UNITS has been deprecated
#16 10.44 [javac] volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 10.44 [javac] ^
#16 10.44 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1166: warning: [deprecation] MM in UNITS has been deprecated
#16 10.44 [javac] offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 10.44 [javac] ^
#16 10.44 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1170: warning: [deprecation] MM in UNITS has been deprecated
#16 10.44 [javac] offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 10.44 [javac] ^
#16 10.54 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 10.54 [javac] ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 10.54 [javac] ^
#16 10.54 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 10.54 [javac] ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 10.54 [javac] ^
#16 10.54 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 10.54 [javac] ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 10.54 [javac] ^
#16 10.54 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 10.54 [javac] ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 10.54 [javac] ^
#16 10.54 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 10.54 [javac] libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 10.54 [javac] ^
#16 10.54 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:320: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 10.54 [javac] doubleResult[i] = new Double(result.get(i).doubleValue());
#16 10.54 [javac] ^
#16 10.54 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:342: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 10.54 [javac] result[i] = new Double(readNumber().doubleValue());
#16 10.54 [javac] ^
#16 10.61 [javac] Note: Some input files use unchecked or unsafe operations.
#16 10.61 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 10.61 [javac] 50 warnings
#16 10.61
#16 10.61 formats-bsd.jar:
#16 10.62 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 10.74 [resolver:install] Using default POM (ome:formats-bsd:8.2.0-SNAPSHOT)
#16 10.74 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.pom
#16 10.75 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar
#16 10.75 [resolver:install] Installing ome:formats-bsd:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 10.75 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 10.75
#16 10.75 deps-formats-gpl:
#16 10.75
#16 10.75 jar-formats-gpl:
#16 10.85 [echo] isSnapshot = true
#16 10.99
#16 10.99 init-title:
#16 10.99 [echo] ----------=========== formats-gpl ===========----------
#16 10.99
#16 10.99 init-timestamp:
#16 10.99
#16 10.99 init:
#16 10.99
#16 10.99 copy-resources:
#16 10.99 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 10.99 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 10.99
#16 10.99 compile:
#16 11.38 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 11.63 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 12.19 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom (0 B at 0.0 KB/sec)
#16 12.20 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 12.21 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 12.49 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom (0 B at 0.0 KB/sec)
#16 12.53 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 12.54 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 12.81 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom (0 B at 0.0 KB/sec)
#16 12.86 [resolver:resolve] Resolving artifacts
#16 12.87 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 12.87 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 12.91 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 12.91 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 13.06 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (0 B at 0.0 KB/sec)
#16 13.33 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (0 B at 0.0 KB/sec)
#16 13.35 [javac] Compiling 176 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 13.55 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 14.86 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 14.86 [javac] import loci.formats.codec.BitWriter;
#16 14.86 [javac] ^
#16 14.96 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 14.96 [javac] import loci.formats.codec.BitWriter;
#16 14.96 [javac] ^
#16 17.06 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 17.06 [javac] LOGGER.trace("Parsing tokens: {}", tokens);
#16 17.06 [javac] ^
#16 17.06 [javac] cast to Object for a varargs call
#16 17.06 [javac] cast to Object[] for a non-varargs call and to suppress this warning
#16 17.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1269: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.16 [javac] BitWriter bits = null;
#16 17.16 [javac] ^
#16 17.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1271: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.16 [javac] bits = new BitWriter(planes[index].length / 8);
#16 17.16 [javac] ^
#16 17.46 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 17.46 [javac] CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 17.46 [javac] ^
#16 17.86 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.86 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 17.86 [javac] ^
#16 17.86 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.86 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 17.86 [javac] ^
#16 18.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:170: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 18.16 [javac] Variable variable = group.findVariable(variableName);
#16 18.16 [javac] ^
#16 18.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:197: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 18.16 [javac] Variable variable = group.findVariable(variableName);
#16 18.16 [javac] ^
#16 18.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:200: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 18.16 [javac] List<Attribute> attributes = variable.getAttributes();
#16 18.16 [javac] ^
#16 18.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getName() in CDMNode has been deprecated
#16 18.16 [javac] String groupName = group.getName();
#16 18.16 [javac] ^
#16 18.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:239: warning: [deprecation] getAttributes() in Group has been deprecated
#16 18.16 [javac] List<Attribute> attributes = group.getAttributes();
#16 18.16 [javac] ^
#16 18.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:247: warning: [deprecation] getName() in CDMNode has been deprecated
#16 18.16 [javac] String variableName = variable.getName();
#16 18.16 [javac] ^
#16 18.16 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:270: warning: [deprecation] findGroup(String) in Group has been deprecated
#16 18.16 [javac] Group nextParent = parent.findGroup(token);
#16 18.16 [javac] ^
#16 18.16 [javac] Note: Some input files use unchecked or unsafe operations.
#16 18.16 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 18.16 [javac] 16 warnings
#16 18.17
#16 18.17 formats-gpl.jar:
#16 18.18 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 18.34 [resolver:install] Using default POM (ome:formats-gpl:8.2.0-SNAPSHOT)
#16 18.35 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#16 18.41 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#16 18.41 [resolver:install] Installing ome:formats-gpl:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 18.41 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 18.41
#16 18.41 deps-bio-formats-plugins:
#16 18.41
#16 18.41 jar-bio-formats-plugins:
#16 18.51 [echo] isSnapshot = true
#16 18.64
#16 18.64 init-title:
#16 18.64 [echo] ----------=========== bio-formats_plugins ===========----------
#16 18.64
#16 18.64 init-timestamp:
#16 18.64
#16 18.64 init:
#16 18.64
#16 18.64 copy-resources:
#16 18.64 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.65 [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.65
#16 18.65 compile:
#16 18.89 [resolver:resolve] Resolving artifacts
#16 18.91 [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 19.12 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 19.92 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.92 [javac] import loci.common.ReflectedUniverse;
#16 19.92 [javac] ^
#16 19.92 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.92 [javac] import loci.common.ReflectedUniverse;
#16 19.92 [javac] ^
#16 20.42 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 20.42 [javac] "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 20.42 [javac] ^
#16 20.52 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.52 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 20.52 [javac] ^
#16 20.52 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.52 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 20.52 [javac] ^
#16 20.62 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.62 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 20.62 [javac] ^
#16 20.62 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.62 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 20.62 [javac] ^
#16 21.02 [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 21.02 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 21.02 [javac] 8 warnings
#16 21.07
#16 21.07 bio-formats-plugins.jar:
#16 21.08 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 21.11 [resolver:install] Using default POM (ome:bio-formats_plugins:8.2.0-SNAPSHOT)
#16 21.11 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#16 21.12 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#16 21.12 [resolver:install] Installing ome:bio-formats_plugins:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 21.12 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 21.12
#16 21.12 deps-bio-formats-tools:
#16 21.12
#16 21.12 jar-bio-formats-tools:
#16 21.25 [echo] isSnapshot = true
#16 21.39
#16 21.39 init-title:
#16 21.39 [echo] ----------=========== bio-formats-tools ===========----------
#16 21.39
#16 21.39 init-timestamp:
#16 21.39
#16 21.39 init:
#16 21.39
#16 21.39 copy-resources:
#16 21.39 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 21.39
#16 21.39 compile:
#16 21.63 [resolver:resolve] Resolving artifacts
#16 21.64 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 21.85 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 22.94 [javac] 1 warning
#16 22.94
#16 22.94 bio-formats-tools.jar:
#16 22.94 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 22.95 [resolver:install] Using default POM (ome:bio-formats-tools:8.2.0-SNAPSHOT)
#16 22.95 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#16 23.01 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#16 23.01 [resolver:install] Installing ome:bio-formats-tools:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 23.01 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 23.01
#16 23.01 deps-tests:
#16 23.01
#16 23.01 jar-tests:
#16 23.10 [echo] isSnapshot = true
#16 23.23
#16 23.23 init-title:
#16 23.23 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 23.23
#16 23.23 init-timestamp:
#16 23.23
#16 23.23 init:
#16 23.23
#16 23.23 copy-resources:
#16 23.23 [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 23.23
#16 23.23 compile:
#16 23.55 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.63 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.64 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.07 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.50 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#16 24.57 [resolver:resolve] Resolving artifacts
#16 24.58 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.62 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.63 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.04 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.41 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 25.41 [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 25.72 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 26.72 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:605: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 26.72 [javac] int index = unflattenedReader.getCoreIndex();
#16 26.72 [javac] ^
#16 26.72 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:606: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 26.72 [javac] reader.setCoreIndex(index);
#16 26.72 [javac] ^
#16 26.92 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2263: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 26.92 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 26.92 [javac] ^
#16 26.92 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2429: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 26.92 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 26.92 [javac] ^
#16 27.22 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 27.22 [javac] FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 27.22 [javac] ^
#16 27.22 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 27.22 [javac] FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 27.22 [javac] ^
#16 27.32 [javac] Note: Some input files use unchecked or unsafe operations.
#16 27.32 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 27.32 [javac] 7 warnings
#16 27.32
#16 27.32 tests.jar:
#16 27.32 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 27.33 [resolver:install] Using default POM (ome:test-suite:8.2.0-SNAPSHOT)
#16 27.34 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.pom
#16 27.44 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.jar
#16 27.46 [resolver:install] Installing ome:test-suite:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 27.46 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 27.46
#16 27.46 jars:
#16 27.46
#16 27.46 copy-jars:
#16 27.46
#16 27.46 deps-formats-api:
#16 27.51 [echo] isSnapshot = true
#16 27.55
#16 27.55 install-pom:
#16 27.68 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/pom-bio-formats-8.2.0-SNAPSHOT.pom
#16 27.70 [resolver:install] Installing ome:pom-bio-formats:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 27.70 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 27.70
#16 27.70 jar-formats-api:
#16 27.79 [echo] isSnapshot = true
#16 27.92
#16 27.92 init-title:
#16 27.92 [echo] ----------=========== formats-api ===========----------
#16 27.92
#16 27.92 init-timestamp:
#16 27.92
#16 27.92 init:
#16 27.92
#16 27.92 copy-resources:
#16 27.92
#16 27.92 compile:
#16 28.07 [resolver:resolve] Resolving artifacts
#16 28.08
#16 28.08 formats-api.jar:
#16 28.11 [resolver:install] Using default POM (ome:formats-api:8.2.0-SNAPSHOT)
#16 28.12 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.pom
#16 28.12 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/formats-api-8.2.0-SNAPSHOT.jar
#16 28.12 [resolver:install] Installing ome:formats-api:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 28.12 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 28.12
#16 28.12 deps-turbojpeg:
#16 28.12
#16 28.12 jar-turbojpeg:
#16 28.21 [echo] isSnapshot = true
#16 28.34
#16 28.34 init-title:
#16 28.34 [echo] ----------=========== turbojpeg ===========----------
#16 28.34
#16 28.34 init-timestamp:
#16 28.34
#16 28.34 init:
#16 28.34
#16 28.34 copy-resources:
#16 28.34
#16 28.34 compile:
#16 28.35 [resolver:resolve] Resolving artifacts
#16 28.35
#16 28.35 jar:
#16 28.36 [resolver:install] Using default POM (ome:turbojpeg:8.2.0-SNAPSHOT)
#16 28.36 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.pom
#16 28.36 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/turbojpeg-8.2.0-SNAPSHOT.jar
#16 28.37 [resolver:install] Installing ome:turbojpeg:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 28.37 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 28.37
#16 28.37 deps-formats-bsd:
#16 28.37
#16 28.37 jar-formats-bsd:
#16 28.46 [echo] isSnapshot = true
#16 28.59
#16 28.59 init-title:
#16 28.59 [echo] ----------=========== formats-bsd ===========----------
#16 28.59
#16 28.59 init-timestamp:
#16 28.59
#16 28.59 init:
#16 28.59
#16 28.59 copy-resources:
#16 28.59
#16 28.59 compile:
#16 28.78 [resolver:resolve] Resolving artifacts
#16 28.80
#16 28.80 formats-bsd.jar:
#16 28.84 [resolver:install] Using default POM (ome:formats-bsd:8.2.0-SNAPSHOT)
#16 28.84 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.pom
#16 28.84 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/formats-bsd-8.2.0-SNAPSHOT.jar
#16 28.84 [resolver:install] Installing ome:formats-bsd:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 28.84 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 28.84
#16 28.84 deps-formats-gpl:
#16 28.84
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#16 29.07 [echo] ----------=========== formats-gpl ===========----------
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#16 29.31
#16 29.31 formats-gpl.jar:
#16 29.35 [resolver:install] Using default POM (ome:formats-gpl:8.2.0-SNAPSHOT)
#16 29.36 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.pom
#16 29.36 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/formats-gpl-8.2.0-SNAPSHOT.jar
#16 29.36 [resolver:install] Installing ome:formats-gpl:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 29.36 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 29.36
#16 29.36 deps-bio-formats-plugins:
#16 29.36
#16 29.36 jar-bio-formats-plugins:
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#16 29.58
#16 29.58 init-title:
#16 29.58 [echo] ----------=========== bio-formats_plugins ===========----------
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#16 29.84 bio-formats-plugins.jar:
#16 29.85 [resolver:install] Using default POM (ome:bio-formats_plugins:8.2.0-SNAPSHOT)
#16 29.85 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.pom
#16 29.85 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar
#16 29.86 [resolver:install] Installing ome:bio-formats_plugins:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 29.86 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 29.86
#16 29.86 deps-bio-formats-tools:
#16 29.86
#16 29.86 jar-bio-formats-tools:
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#16 30.14
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#16 30.14 [echo] ----------=========== bio-formats-tools ===========----------
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#16 30.14
#16 30.14 compile:
#16 30.42 [resolver:resolve] Resolving artifacts
#16 30.43
#16 30.43 bio-formats-tools.jar:
#16 30.43 [resolver:install] Using default POM (ome:bio-formats-tools:8.2.0-SNAPSHOT)
#16 30.43 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.pom
#16 30.43 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/bio-formats-tools-8.2.0-SNAPSHOT.jar
#16 30.44 [resolver:install] Installing ome:bio-formats-tools:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 30.44 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 30.44
#16 30.44 deps-tests:
#16 30.44
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#16 30.65
#16 30.65 init-title:
#16 30.65 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 30.65
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#16 30.65 init:
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#16 30.65
#16 30.65 compile:
#16 30.88 [resolver:resolve] Resolving artifacts
#16 30.89
#16 30.89 tests.jar:
#16 30.90 [resolver:install] Using default POM (ome:test-suite:8.2.0-SNAPSHOT)
#16 30.90 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.pom
#16 30.90 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/test-suite-8.2.0-SNAPSHOT.jar
#16 30.90 [resolver:install] Installing ome:test-suite:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 30.91 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 30.91
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#16 30.91
#16 30.91 tools:
#16 30.91 [echo] ----------=========== bioformats_package ===========----------
#16 31.00 [echo] isSnapshot = true
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#16 31.13 bundle:
#16 31.38 [resolver:resolve] Resolving artifacts
#16 31.39 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.2.0-SNAPSHOT/bio-formats_plugins-8.2.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.43 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.26-SNAPSHOT/ome-common-6.0.26-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.45 [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.48 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.49 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 31.64 [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 31.93 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.99 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 32.11 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.11 [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.7/joda-time-2.12.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.32 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.1-jre/guava-32.0.1-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 32.93 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.93 [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.94 [unzip] Expanding: /home/build/.m2/repository/org/checkerframework/checker-qual/3.33.0/checker-qual-3.33.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.04 [unzip] Expanding: /home/build/.m2/repository/com/google/errorprone/error_prone_annotations/2.18.0/error_prone_annotations-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.05 [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.05 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.5.0-SNAPSHOT/ome-xml-6.5.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.13 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.5.0-SNAPSHOT/specification-6.5.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 33.55 [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 34.21 [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 37.83 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 45.17 [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 45.96 [resolver:install] Using default POM (ome:bioformats_package:8.2.0-SNAPSHOT)
#16 45.96 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/bioformats_package-8.2.0-SNAPSHOT.pom
#16 45.96 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/bioformats_package-8.2.0-SNAPSHOT.jar
#16 46.01 [resolver:install] Installing ome:bioformats_package:8.2.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.2.0-SNAPSHOT/maven-metadata-local.xml
#16 46.01 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 46.02
#16 46.02 BUILD SUCCESSFUL
#16 46.02 Total time: 44 seconds
#16 DONE 46.6s
#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.0s
#18 exporting to image
#18 exporting layers
#18 exporting layers 4.1s done
#18 writing image sha256:cc826f5c603b8dfe510e6b75ad0054aeb6b7a2780cdbc996a4f80e99d60c9db9 done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 4.1s
[33m1 warning found (use docker --debug to expand):
[0m - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS
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