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#14 597.9 Progress (2): 112/780 kB | 116/121 kB
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Downloading from central: https://repo.maven.apache.org/maven2/commons-math/commons-math/1.2/commons-math-1.2.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/com/google/re2j/re2j/1.3/re2j-1.3.jar (121 kB at 1.7 MB/s)
#14 597.9 Downloading from central: https://repo.maven.apache.org/maven2/org/xerial/sqlite-jdbc/3.49.1.0/sqlite-jdbc-3.49.1.0.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/commons-math/commons-math/1.2/commons-math-1.2.jar (338 kB at 3.2 MB/s)
#14 598.0 Progress (2): 780 kB | 0.2/14 MB
                                
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.jar (780 kB at 7.3 MB/s)
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Downloaded from central: https://repo.maven.apache.org/maven2/org/xerial/sqlite-jdbc/3.49.1.0/sqlite-jdbc-3.49.1.0.jar (14 MB at 20 MB/s)
#14 598.6 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#14 598.6 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#14 599.0 Progress (1): 4.1/80 kB
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Downloaded from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (80 kB at 50 kB/s)
#14 600.8 Progress (1): 0/4.3 MB
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Downloaded from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (4.3 MB at 24 kB/s)
#14 776.2 [[1;34mINFO[m] 
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#14 776.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 776.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 776.2 [[1;34mINFO[m] Storing buildNumber: afa3514be950643cc6f1618f3d3f22d14030c3a8 at timestamp: 1749687764735
#14 776.2 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 776.2 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 776.2 
#14 776.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 776.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 776.2 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
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#14 776.2 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
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#14 776.2 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/formats-gpl/lib
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#14 776.3 [[1;34mINFO[m] Changes detected - recompiling the module!
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#14 778.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Some input files use or override a deprecated API.
#14 778.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Recompile with -Xlint:deprecation for details.
#14 778.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Some input files use unchecked or unsafe operations.
#14 778.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Recompile with -Xlint:unchecked for details.
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#14 778.4 [[1;34mINFO[m] Changes detected - recompiling the module!
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#14 778.6 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java uses unchecked or unsafe operations.
#14 778.6 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: Recompile with -Xlint:unchecked for details.
#14 778.6 [[1;34mINFO[m] 
#14 778.6 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mformats-gpl[0;1m ---[m
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#14 778.6 [[1;34mINFO[m]  T E S T S
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#14 778.8 [[1;34mINFO[m] Running [1mTestSuite[m
#14 780.0 2025-06-12 00:22:48,528 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@24528a25 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 780.0 2025-06-12 00:22:48,532 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@46292372 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 780.1 2025-06-12 00:22:48,584 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@1f9d6c7b reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 780.1 2025-06-12 00:22:48,584 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@68ace111 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 780.1 2025-06-12 00:22:48,633 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@4c9e9fb8 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 780.1 2025-06-12 00:22:48,633 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@9ec531 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 780.2 2025-06-12 00:22:48,682 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@29006752 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 780.2 2025-06-12 00:22:48,682 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@534243e4 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 780.2 2025-06-12 00:22:48,727 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@2e647e59 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 780.2 2025-06-12 00:22:48,728 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@4bd2f0dc reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 780.3 2025-06-12 00:22:48,790 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@6bff19ff reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 780.3 2025-06-12 00:22:48,790 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@41e1455d reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 780.3 2025-06-12 00:22:48,837 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@35c09b94 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 780.3 2025-06-12 00:22:48,837 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@2d0bfb24 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 780.4 2025-06-12 00:22:48,879 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@59942b48 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 780.4 2025-06-12 00:22:48,880 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@1869f114 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 780.6 [[1;34mINFO[m] [1;32mTests run: [0;1;32m99[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.837 s - in [1mTestSuite[m
#14 780.9 [[1;34mINFO[m] 
#14 780.9 [[1;34mINFO[m] Results:
#14 780.9 [[1;34mINFO[m] 
#14 780.9 [[1;34mINFO[m] [1;32mTests run: 99, Failures: 0, Errors: 0, Skipped: 0[m
#14 780.9 [[1;34mINFO[m] 
#14 780.9 [[1;34mINFO[m] 
#14 780.9 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-mdb-test)[m @ [36mformats-gpl[0;1m ---[m
#14 781.0 [[1;34mINFO[m] 
#14 781.0 [[1;34mINFO[m] -------------------------------------------------------
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#14 781.0 [[1;34mINFO[m] -------------------------------------------------------
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#14 781.5 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.426 s - in [1mTestSuite[m
#14 781.9 [[1;34mINFO[m] 
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#14 781.9 [[1;34mINFO[m] 
#14 781.9 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 781.9 [[1;34mINFO[m] 
#14 781.9 [[1;34mINFO[m] 
#14 781.9 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-poi-test)[m @ [36mformats-gpl[0;1m ---[m
#14 781.9 [[1;34mINFO[m] 
#14 781.9 [[1;34mINFO[m] -------------------------------------------------------
#14 781.9 [[1;34mINFO[m]  T E S T S
#14 781.9 [[1;34mINFO[m] -------------------------------------------------------
#14 782.0 [[1;34mINFO[m] Running [1mTestSuite[m
#14 782.5 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.457 s - in [1mTestSuite[m
#14 782.8 [[1;34mINFO[m] 
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#14 782.8 [[1;34mINFO[m] 
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#14 782.8 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-netcdf-test)[m @ [36mformats-gpl[0;1m ---[m
#14 782.8 [[1;34mINFO[m] 
#14 782.8 [[1;34mINFO[m] -------------------------------------------------------
#14 782.8 [[1;34mINFO[m]  T E S T S
#14 782.8 [[1;34mINFO[m] -------------------------------------------------------
#14 783.0 [[1;34mINFO[m] Running [1mTestSuite[m
#14 783.4 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.413 s - in [1mTestSuite[m
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#14 783.7 [[1;34mINFO[m] 
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#14 783.7 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mformats-gpl[0;1m ---[m
#14 783.8 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.3.0-SNAPSHOT.jar
#14 783.8 [[1;34mINFO[m] 
#14 783.8 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m >>>[m
#14 783.8 [[1;34mINFO[m] 
#14 783.8 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mformats-gpl[0;1m ---[m
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#14 783.8 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 783.8 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 783.8 [[1;34mINFO[m] Storing buildNumber: afa3514be950643cc6f1618f3d3f22d14030c3a8 at timestamp: 1749687772309
#14 783.8 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 783.8 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 783.8 
#14 783.8 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 783.8 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 783.8 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 783.8 [[1;34mINFO[m] 
#14 783.8 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m <<<[m
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#14 783.8 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.3.0-SNAPSHOT-sources.jar
#14 783.9 [[1;34mINFO[m] 
#14 783.9 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 783.9 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.3.0-SNAPSHOT-tests.jar
#14 783.9 [[1;34mINFO[m] 
#14 783.9 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mformats-gpl[0;1m ---[m
#14 783.9 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.3.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.jar
#14 783.9 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.pom
#14 783.9 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.3.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT-sources.jar
#14 783.9 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.3.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT-tests.jar
#14 783.9 [[1;34mINFO[m] 
#14 783.9 [[1;34mINFO[m] [1m----------------------< [0;36mome:bio-formats_plugins[0;1m >-----------------------[m
#14 783.9 [[1;34mINFO[m] [1mBuilding Bio-Formats Plugins for ImageJ 8.3.0-SNAPSHOT           [17/24][m
#14 783.9 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 783.9 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom
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Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom (7.9 kB at 255 kB/s)
#14 784.0 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar (2.5 MB at 20 MB/s)
#14 784.1 [[1;34mINFO[m] 
#14 784.1 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 784.1 [[1;34mINFO[m] 
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#14 784.1 [[1;34mINFO[m] 
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#14 784.1 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 784.1 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 784.1 [[1;34mINFO[m] Storing buildNumber: afa3514be950643cc6f1618f3d3f22d14030c3a8 at timestamp: 1749687772611
#14 784.1 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 784.1 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 784.1 
#14 784.1 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 784.1 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 784.1 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 784.1 [[1;34mINFO[m] 
#14 784.1 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 784.1 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 784.1 [[1;34mINFO[m] Copying 3 resources
#14 784.1 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-plugins/lib
#14 784.1 [[1;34mINFO[m] Copying 0 resource
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#14 784.1 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 784.1 [[1;34mINFO[m] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/classes
#14 784.6 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Some input files use or override a deprecated API.
#14 784.6 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Recompile with -Xlint:deprecation for details.
#14 784.6 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#14 784.6 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: Recompile with -Xlint:unchecked for details.
#14 784.6 [[1;34mINFO[m] 
#14 784.6 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 784.6 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 784.6 [[1;34mINFO[m] Copying 1 resource
#14 784.6 [[1;34mINFO[m] 
#14 784.6 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 784.6 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 784.6 [[1;34mINFO[m] Compiling 3 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/test-classes
#14 784.7 [[1;34mINFO[m] 
#14 784.7 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 784.7 [[1;34mINFO[m] 
#14 784.7 [[1;34mINFO[m] -------------------------------------------------------
#14 784.7 [[1;34mINFO[m]  T E S T S
#14 784.7 [[1;34mINFO[m] -------------------------------------------------------
#14 784.9 [[1;34mINFO[m] Running [1mTestSuite[m
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#14 786.5 Warning: Data has too many channels for Composite color mode
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#14 788.2 Warning: Data has too many channels for Composite color mode
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#14 788.4 Warning: Data has too many channels for Composite color mode
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#14 788.4 Warning: Data has too many channels for Custom color mode
#14 788.4 Warning: Data has too many channels for Custom color mode
#14 788.5 Warning: Data has too many channels for Custom color mode
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#14 788.5 Warning: Data has too many channels for Custom color mode
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#14 788.6 Warning: Data has too many channels for Default color mode
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#14 788.7 Warning: Data has too many channels for Default color mode
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#14 788.8 Warning: Data has too many channels for Default color mode
#14 788.8 Warning: Data has too many channels for Default color mode
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#14 788.8 Warning: Data has too many channels for Default color mode
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#14 788.9 Warning: Data has too many channels for Default color mode
#14 789.0 Warning: Data has too many channels for Default color mode
#14 789.0 Warning: Data has too many channels for Grayscale color mode
#14 789.0 Warning: Data has too many channels for Grayscale color mode
#14 789.0 Warning: Data has too many channels for Grayscale color mode
#14 789.0 Warning: Data has too many channels for Grayscale color mode
#14 789.1 Warning: Data has too many channels for Grayscale color mode
#14 789.1 Warning: Data has too many channels for Grayscale color mode
#14 789.1 Warning: Data has too many channels for Grayscale color mode
#14 789.1 Warning: Data has too many channels for Grayscale color mode
#14 789.2 Warning: Data has too many channels for Colorized color mode
#14 789.2 Warning: Data has too many channels for Colorized color mode
#14 789.2 Warning: Data has too many channels for Colorized color mode
#14 789.8 Warning: Data has too many channels for Default color mode
#14 790.0 [[1;34mINFO[m] [1;32mTests run: [0;1;32m30[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 5.121 s - in [1mTestSuite[m
#14 790.3 [[1;34mINFO[m] 
#14 790.3 [[1;34mINFO[m] Results:
#14 790.3 [[1;34mINFO[m] 
#14 790.3 [[1;34mINFO[m] [1;32mTests run: 30, Failures: 0, Errors: 0, Skipped: 0[m
#14 790.3 [[1;34mINFO[m] 
#14 790.3 [[1;34mINFO[m] 
#14 790.3 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 790.4 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.3.0-SNAPSHOT.jar
#14 790.4 [[1;34mINFO[m] 
#14 790.4 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m >>>[m
#14 790.4 [[1;34mINFO[m] 
#14 790.4 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 790.4 [[1;34mINFO[m] 
#14 790.4 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 790.4 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 790.4 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 790.4 [[1;34mINFO[m] Storing buildNumber: afa3514be950643cc6f1618f3d3f22d14030c3a8 at timestamp: 1749687778891
#14 790.4 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 790.4 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 790.4 
#14 790.4 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 790.4 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 790.4 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 790.4 [[1;34mINFO[m] 
#14 790.4 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m <<<[m
#14 790.4 [[1;34mINFO[m] 
#14 790.4 [[1;34mINFO[m] 
#14 790.4 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 790.4 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.3.0-SNAPSHOT-sources.jar
#14 790.4 [[1;34mINFO[m] 
#14 790.4 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 790.4 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.3.0-SNAPSHOT-tests.jar
#14 790.4 [[1;34mINFO[m] 
#14 790.4 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 790.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.3.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.jar
#14 790.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.pom
#14 790.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.3.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT-sources.jar
#14 790.5 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.3.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT-tests.jar
#14 790.5 [[1;34mINFO[m] 
#14 790.5 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bio-formats-tools[0;1m >------------------------[m
#14 790.5 [[1;34mINFO[m] [1mBuilding Bio-Formats command line tools 8.3.0-SNAPSHOT           [18/24][m
#14 790.5 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 790.5 [[1;34mINFO[m] 
#14 790.5 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats-tools[0;1m ---[m
#14 790.5 [[1;34mINFO[m] 
#14 790.5 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 790.5 [[1;34mINFO[m] 
#14 790.5 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 790.5 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 790.5 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 790.5 [[1;34mINFO[m] Storing buildNumber: afa3514be950643cc6f1618f3d3f22d14030c3a8 at timestamp: 1749687778974
#14 790.5 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 790.5 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 790.5 
#14 790.5 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 790.5 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 790.5 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 790.5 [[1;34mINFO[m] 
#14 790.5 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 790.5 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 790.5 [[1;34mINFO[m] Copying 0 resource
#14 790.5 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-tools/lib
#14 790.5 [[1;34mINFO[m] Copying 0 resource
#14 790.5 [[1;34mINFO[m] Copying 0 resource
#14 790.5 [[1;34mINFO[m] 
#14 790.5 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 790.5 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 790.5 [[1;34mINFO[m] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/target/classes
#14 790.6 [[1;34mINFO[m] 
#14 790.6 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 790.6 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 790.6 [[1;34mINFO[m] Copying 1 resource
#14 790.7 [[1;34mINFO[m] 
#14 790.7 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 790.7 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 790.7 [[1;34mINFO[m] Compiling 1 source file to /bio-formats-build/bioformats/components/bio-formats-tools/target/test-classes
#14 790.8 [[1;34mINFO[m] 
#14 790.8 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats-tools[0;1m ---[m
#14 790.8 [[1;34mINFO[m] 
#14 790.8 [[1;34mINFO[m] -------------------------------------------------------
#14 790.8 [[1;34mINFO[m]  T E S T S
#14 790.8 [[1;34mINFO[m] -------------------------------------------------------
#14 791.0 [[1;34mINFO[m] Running loci.formats.tools.[1mImageConverterTest[m
#14 874.8 [[1;34mINFO[m] [1;32mTests run: [0;1;32m55[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 83.842 s - in loci.formats.tools.[1mImageConverterTest[m
#14 875.2 [[1;34mINFO[m] 
#14 875.2 [[1;34mINFO[m] Results:
#14 875.2 [[1;34mINFO[m] 
#14 875.2 [[1;34mINFO[m] [1;32mTests run: 55, Failures: 0, Errors: 0, Skipped: 0[m
#14 875.2 [[1;34mINFO[m] 
#14 875.2 [[1;34mINFO[m] 
#14 875.2 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats-tools[0;1m ---[m
#14 875.2 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.3.0-SNAPSHOT.jar
#14 875.2 [[1;34mINFO[m] 
#14 875.2 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m >>>[m
#14 875.2 [[1;34mINFO[m] 
#14 875.2 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 875.2 [[1;34mINFO[m] 
#14 875.2 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 875.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 875.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 875.2 [[1;34mINFO[m] Storing buildNumber: afa3514be950643cc6f1618f3d3f22d14030c3a8 at timestamp: 1749687863681
#14 875.2 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 875.2 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 875.2 
#14 875.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 875.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 875.2 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 875.2 [[1;34mINFO[m] 
#14 875.2 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m <<<[m
#14 875.2 [[1;34mINFO[m] 
#14 875.2 [[1;34mINFO[m] 
#14 875.2 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 875.2 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.3.0-SNAPSHOT-sources.jar
#14 875.2 [[1;34mINFO[m] 
#14 875.2 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 875.2 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.3.0-SNAPSHOT-tests.jar
#14 875.2 [[1;34mINFO[m] 
#14 875.2 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats-tools[0;1m ---[m
#14 875.2 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.3.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.jar
#14 875.2 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.pom
#14 875.2 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.3.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT-sources.jar
#14 875.2 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.3.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT-tests.jar
#14 875.2 [[1;34mINFO[m] 
#14 875.2 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bioformats_package[0;1m >-----------------------[m
#14 875.2 [[1;34mINFO[m] [1mBuilding bioformats_package bundle 8.3.0-SNAPSHOT                [19/24][m
#14 875.2 [[1;34mINFO[m] [1m--------------------------------[ pom ]---------------------------------[m
#14 875.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.pom
#14 875.2 Progress (1): 4.1/16 kB
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#14 875.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.jar
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#14 875.3 [output clipped, log limit 2MiB reached]
#14 998.5 SLF4J: No SLF4J providers were found.
#14 998.5 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 998.5 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 998.8 WARNING: A Java agent has been loaded dynamically (/home/build/.m2/repository/net/bytebuddy/byte-buddy-agent/1.10.19/byte-buddy-agent-1.10.19.jar)
#14 998.8 WARNING: If a serviceability tool is in use, please run with -XX:+EnableDynamicAgentLoading to hide this warning
#14 998.8 WARNING: If a serviceability tool is not in use, please run with -Djdk.instrument.traceUsage for more information
#14 998.8 WARNING: Dynamic loading of agents will be disallowed by default in a future release
#14 DONE 1005.3s

#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.0s

#16 [12/13] RUN ant jars tools
#16 0.934 Buildfile: /bio-formats-build/bioformats/build.xml
#16 1.309      [echo] isSnapshot = true
#16 3.424 
#16 3.424 copy-jars:
#16 3.424 
#16 3.424 deps-formats-api:
#16 3.510      [echo] isSnapshot = true
#16 3.601 
#16 3.601 install-pom:
#16 3.800 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.3.0-SNAPSHOT/pom-bio-formats-8.3.0-SNAPSHOT.pom
#16 3.859 [resolver:install] Installing ome:pom-bio-formats:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 3.863 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 3.864 
#16 3.864 jar-formats-api:
#16 3.992      [echo] isSnapshot = true
#16 4.168 
#16 4.168 init-title:
#16 4.168      [echo] ----------=========== formats-api ===========----------
#16 4.168 
#16 4.168 init-timestamp:
#16 4.176 
#16 4.176 init:
#16 4.176 
#16 4.176 copy-resources:
#16 4.177     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 4.191      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 4.193 
#16 4.193 compile:
#16 4.383 [resolver:resolve] Resolving artifacts
#16 4.411     [javac] Compiling 54 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 4.666     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 4.666     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 4.666     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 4.666     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 5.367     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 5.367     [javac] import loci.common.ReflectedUniverse;
#16 5.367     [javac]                   ^
#16 5.567     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.567     [javac]     int currentIndex = r.getCoreIndex();
#16 5.568     [javac]                         ^
#16 5.568     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.568     [javac]     r.setCoreIndex(coreIndex);
#16 5.568     [javac]      ^
#16 5.568     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.568     [javac]     r.setCoreIndex(currentIndex);
#16 5.568     [javac]      ^
#16 5.668     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.668     [javac]   public void setCoreIndex(int no) {
#16 5.668     [javac]               ^
#16 5.668     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.668     [javac]   public int getCoreIndex() {
#16 5.668     [javac]              ^
#16 5.668     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.668     [javac]   public int coreIndexToSeries(int index)
#16 5.669     [javac]              ^
#16 5.669     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.669     [javac]   public int seriesToCoreIndex(int series)
#16 5.669     [javac]              ^
#16 5.669     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.669     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 5.669     [javac]                             ^
#16 5.769     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.769     [javac]     if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 5.769     [javac]                                              ^
#16 5.769     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.769     [javac]     if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 5.769     [javac]                                              ^
#16 5.769     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.770     [javac]       core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 5.770     [javac]                                                      ^
#16 5.770     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.770     [javac]       core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 5.770     [javac]                                                      ^
#16 5.870     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:266: warning: [deprecation] URL(String) in URL has been deprecated
#16 5.870     [javac]       Manifest manifest = new Manifest(new URL(manifestPath).openStream());
#16 5.870     [javac]                                        ^
#16 5.870     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 5.870     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 5.870     [javac]     ^
#16 5.871     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 5.871     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 5.871     [javac]                               ^
#16 5.971     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.971     [javac]   public void setCoreIndex(int no) {
#16 5.971     [javac]               ^
#16 5.971     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.971     [javac]   public int getCoreIndex() {
#16 5.971     [javac]              ^
#16 5.971     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.971     [javac]   public int coreIndexToSeries(int index) {
#16 5.971     [javac]              ^
#16 5.971     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.971     [javac]   public int seriesToCoreIndex(int series) {
#16 5.972     [javac]              ^
#16 5.972     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.972     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 5.972     [javac]                             ^
#16 5.972     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.972     [javac]     return getReader().getCoreMetadataList();
#16 5.972     [javac]                       ^
#16 5.972     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.972     [javac]     return getReader().getCoreIndex();
#16 5.972     [javac]                       ^
#16 5.972     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.972     [javac]     getReader().setCoreIndex(no);
#16 5.972     [javac]                ^
#16 5.972     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.972     [javac]     return getReader().seriesToCoreIndex(series);
#16 5.972     [javac]                       ^
#16 5.972     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.972     [javac]     return getReader().coreIndexToSeries(index);
#16 5.972     [javac]                       ^
#16 6.073     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.073     [javac]   public void setCoreIndex(int no) {
#16 6.073     [javac]               ^
#16 6.073     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.073     [javac]   public int getCoreIndex() {
#16 6.073     [javac]              ^
#16 6.073     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 6.073     [javac]   public int coreIndexToSeries(int index) {
#16 6.073     [javac]              ^
#16 6.073     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 6.073     [javac]   public int seriesToCoreIndex(int series) {
#16 6.073     [javac]              ^
#16 6.073     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.073     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 6.073     [javac]                             ^
#16 6.073     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.073     [javac]     List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 6.074     [javac]                                        ^
#16 6.074     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.074     [javac]     return reader.getCoreIndex();
#16 6.074     [javac]                  ^
#16 6.074     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.074     [javac]     reader.setCoreIndex(no);
#16 6.074     [javac]           ^
#16 6.074     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 6.074     [javac]     return reader.seriesToCoreIndex(series);
#16 6.074     [javac]                  ^
#16 6.074     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 6.074     [javac]     return reader.coreIndexToSeries(index);
#16 6.074     [javac]                  ^
#16 6.274     [javac] Note: Some input files use unchecked or unsafe operations.
#16 6.274     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 6.275     [javac] 40 warnings
#16 6.275 
#16 6.275 formats-api.jar:
#16 6.276     [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 6.301       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 6.336 [resolver:install] Using default POM (ome:formats-api:8.3.0-SNAPSHOT)
#16 6.339 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/formats-api-8.3.0-SNAPSHOT.pom
#16 6.347 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/formats-api-8.3.0-SNAPSHOT.jar
#16 6.348 [resolver:install] Installing ome:formats-api:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 6.351 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 6.351 
#16 6.351 deps-turbojpeg:
#16 6.352 
#16 6.352 jar-turbojpeg:
#16 6.455      [echo] isSnapshot = true
#16 6.598 
#16 6.598 init-title:
#16 6.598      [echo] ----------=========== turbojpeg ===========----------
#16 6.598 
#16 6.598 init-timestamp:
#16 6.598 
#16 6.598 init:
#16 6.598 
#16 6.598 copy-resources:
#16 6.599     [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 6.600 
#16 6.600 compile:
#16 6.609 [resolver:resolve] Resolving artifacts
#16 6.612     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 6.823     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 6.823     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 6.823     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 6.823     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 7.524     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 7.524     [javac]   protected void finalize() throws Throwable {
#16 7.524     [javac]                  ^
#16 7.524     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 7.524     [javac]       super.finalize();
#16 7.524     [javac]            ^
#16 7.524     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 7.524     [javac]   protected void finalize() throws Throwable {
#16 7.524     [javac]                  ^
#16 7.524     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 7.524     [javac]       super.finalize();
#16 7.524     [javac]            ^
#16 7.550     [javac] 8 warnings
#16 7.551 
#16 7.551 jar:
#16 7.554       [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 7.746 [resolver:install] Using default POM (ome:turbojpeg:8.3.0-SNAPSHOT)
#16 7.752 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/turbojpeg-8.3.0-SNAPSHOT.pom
#16 7.755 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/turbojpeg-8.3.0-SNAPSHOT.jar
#16 7.762 [resolver:install] Installing ome:turbojpeg:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 7.766 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 7.768 
#16 7.768 deps-formats-bsd:
#16 7.768 
#16 7.768 jar-formats-bsd:
#16 7.889      [echo] isSnapshot = true
#16 8.037 
#16 8.037 init-title:
#16 8.037      [echo] ----------=========== formats-bsd ===========----------
#16 8.037 
#16 8.037 init-timestamp:
#16 8.038 
#16 8.038 init:
#16 8.038 
#16 8.038 copy-resources:
#16 8.038     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 8.041      [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 8.042 
#16 8.042 compile:
#16 8.267 [resolver:resolve] Resolving artifacts
#16 8.296     [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 8.505     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 8.505     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 8.505     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 8.505     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 9.606     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 9.606     [javac] import loci.common.ReflectedUniverse;
#16 9.606     [javac]                   ^
#16 10.01     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.01     [javac]       core.size() != reader.getCoreMetadataList().size())
#16 10.01     [javac]                            ^
#16 10.01     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.01     [javac]       List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 10.01     [javac]                                          ^
#16 10.01     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.01     [javac]     int n = reader.getCoreMetadataList().size();
#16 10.01     [javac]                   ^
#16 10.01     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 10.01     [javac]     reader.setCoreIndex(coreIndex);
#16 10.01     [javac]           ^
#16 10.01     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.01     [javac]     int n = reader.getCoreMetadataList().size();
#16 10.01     [javac]                   ^
#16 10.01     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.01     [javac]     int n = reader.getCoreMetadataList().size();
#16 10.01     [javac]                   ^
#16 10.01     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 10.01     [javac]     if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 10.01     [javac]                                         ^
#16 10.01     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.01     [javac]     int n = reader.getCoreMetadataList().size();
#16 10.01     [javac]                   ^
#16 10.01     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 10.01     [javac]     if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 10.01     [javac]                                         ^
#16 10.01     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.01     [javac]     int n = reader.getCoreMetadataList().size();
#16 10.01     [javac]                   ^
#16 10.01     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 10.01     [javac]     if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 10.01     [javac]                                  ^
#16 10.11     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 10.11     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 10.11     [javac]                  ^
#16 10.11     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 10.11     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 10.11     [javac]                                              ^
#16 10.11     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.11     [javac]     return noStitch ? reader.getCoreMetadataList() : core;
#16 10.11     [javac]                             ^
#16 10.11     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.11     [javac]     if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 10.11     [javac]               ^
#16 10.11     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.11     [javac]       seriesCount = reader.getCoreMetadataList().size();
#16 10.11     [javac]                           ^
#16 10.11     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.11     [javac]       if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 10.11     [javac]                 ^
#16 10.11     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.11     [javac]     if (reader.getCoreMetadataList().size() > 1) return 0;
#16 10.11     [javac]               ^
#16 10.11     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.11     [javac]       r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 10.11     [javac]                            ^
#16 10.21     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.21     [javac]     int seriesCount = unwrap().getCoreMetadataList().size();
#16 10.21     [javac]                               ^
#16 10.21     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:230: warning: [deprecation] URL(String) in URL has been deprecated
#16 10.21     [javac]       URLConnection conn = new URL(query.toString()).openConnection();
#16 10.21     [javac]                            ^
#16 10.21     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:314: warning: [deprecation] URL(String) in URL has been deprecated
#16 10.21     [javac]       URL url = new URL(urlPath);
#16 10.21     [javac]                 ^
#16 10.31     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 10.31     [javac]     BitWriter out = new BitWriter();
#16 10.31     [javac]     ^
#16 10.31     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 10.31     [javac]     BitWriter out = new BitWriter();
#16 10.31     [javac]                         ^
#16 10.41     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 10.41     [javac]       return new Double(v);
#16 10.41     [javac]              ^
#16 11.01     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2106: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 11.01     [javac]     return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#16 11.01     [javac]                                         ^
#16 11.01     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2113: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 11.01     [javac]     return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#16 11.01     [javac]                                         ^
#16 11.01     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2120: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 11.01     [javac]     return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#16 11.01     [javac]                                         ^
#16 11.11     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 11.11     [javac]                channelNames.put(new Integer(channelNames.size()), value);
#16 11.11     [javac]                                 ^
#16 11.31     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:622: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 11.31     [javac]       OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 11.31     [javac]                                                                    ^
#16 11.41     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 11.41     [javac]     StreamTokenizer st = new StreamTokenizer(in);
#16 11.41     [javac]                          ^
#16 11.51     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 11.51     [javac]     core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 11.51     [javac]                                                    ^
#16 11.51     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 11.51     [javac]   protected ReflectedUniverse r;
#16 11.51     [javac]             ^
#16 11.51     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 11.51     [javac]       r = new ReflectedUniverse();
#16 11.51     [javac]               ^
#16 11.51     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1043: warning: [deprecation] NM in UNITS has been deprecated
#16 11.51     [javac]           wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 11.51     [javac]                                                                               ^
#16 11.51     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1075: warning: [deprecation] MM in UNITS has been deprecated
#16 11.51     [javac]           sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 11.51     [javac]                                                                                ^
#16 11.51     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1088: warning: [deprecation] MM in UNITS has been deprecated
#16 11.51     [javac]         String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 11.51     [javac]                                                                                   ^
#16 11.51     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1089: warning: [deprecation] MM in UNITS has been deprecated
#16 11.51     [javac]         String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 11.51     [javac]                                                                                   ^
#16 11.51     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1108: warning: [deprecation] MM in UNITS has been deprecated
#16 11.51     [javac]         volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 11.51     [javac]                                                                                        ^
#16 11.51     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1112: warning: [deprecation] MM in UNITS has been deprecated
#16 11.51     [javac]         volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 11.51     [javac]                                                                                         ^
#16 11.51     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1118: warning: [deprecation] MM in UNITS has been deprecated
#16 11.51     [javac]         volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 11.51     [javac]                                                                                        ^
#16 11.51     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1166: warning: [deprecation] MM in UNITS has been deprecated
#16 11.51     [javac]             offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 11.51     [javac]                                                                                                               ^
#16 11.51     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1170: warning: [deprecation] MM in UNITS has been deprecated
#16 11.51     [javac]             offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 11.51     [javac]                                                                                                               ^
#16 11.61     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 11.61     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 11.61     [javac]               ^
#16 11.61     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 11.61     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 11.61     [javac]                                            ^
#16 11.61     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 11.61     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 11.61     [javac]               ^
#16 11.61     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 11.61     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 11.61     [javac]                                             ^
#16 11.71     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 11.71     [javac]       libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 11.71     [javac]                                        ^
#16 11.71     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:320: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 11.71     [javac]         doubleResult[i] = new Double(result.get(i).doubleValue());
#16 11.71     [javac]                           ^
#16 11.71     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:342: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 11.71     [javac]       result[i] = new Double(readNumber().doubleValue());
#16 11.71     [javac]                   ^
#16 11.71     [javac] Note: Some input files use unchecked or unsafe operations.
#16 11.71     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 11.71     [javac] 55 warnings
#16 11.72 
#16 11.72 formats-bsd.jar:
#16 11.73       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 11.86 [resolver:install] Using default POM (ome:formats-bsd:8.3.0-SNAPSHOT)
#16 11.86 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/formats-bsd-8.3.0-SNAPSHOT.pom
#16 11.92 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/formats-bsd-8.3.0-SNAPSHOT.jar
#16 11.93 [resolver:install] Installing ome:formats-bsd:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 11.93 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 11.93 
#16 11.93 deps-formats-gpl:
#16 11.93 
#16 11.93 jar-formats-gpl:
#16 12.03      [echo] isSnapshot = true
#16 12.17 
#16 12.17 init-title:
#16 12.17      [echo] ----------=========== formats-gpl ===========----------
#16 12.17 
#16 12.17 init-timestamp:
#16 12.17 
#16 12.17 init:
#16 12.17 
#16 12.17 copy-resources:
#16 12.17     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 12.18      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 12.18 
#16 12.18 compile:
#16 12.56 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 12.97 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 13.45 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom (0 B at 0.0 KB/sec)
#16 13.46 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 13.57 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 13.68 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom (0 B at 0.0 KB/sec)
#16 13.70 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 13.80 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 13.92 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom (0 B at 0.0 KB/sec)
#16 13.96 [resolver:resolve] Resolving artifacts
#16 13.97 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 13.97 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 14.11 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 14.11 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 14.46 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (0 B at 0.0 KB/sec)
#16 14.46 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (0 B at 0.0 KB/sec)
#16 14.48     [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 14.69     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 14.69     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 14.69     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 14.69     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 15.89     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.89     [javac] import loci.formats.codec.BitWriter;
#16 15.89     [javac]                          ^
#16 15.99     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.99     [javac] import loci.formats.codec.BitWriter;
#16 15.99     [javac]                          ^
#16 17.89     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 17.89     [javac]       LOGGER.trace("Parsing tokens: {}", tokens);
#16 17.89     [javac]                                          ^
#16 17.89     [javac]   cast to Object for a varargs call
#16 17.89     [javac]   cast to Object[] for a non-varargs call and to suppress this warning
#16 17.99     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1269: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.99     [javac]     BitWriter bits = null;
#16 17.99     [javac]     ^
#16 17.99     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1271: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.99     [javac]       bits = new BitWriter(planes[index].length / 8);
#16 17.99     [javac]                  ^
#16 18.29     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 18.29     [javac]     CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 18.29     [javac]                                                    ^
#16 18.69     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 18.69     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 18.69     [javac]     ^
#16 18.69     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 18.69     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 18.69     [javac]                          ^
#16 18.99     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:170: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 18.99     [javac]     Variable variable = group.findVariable(variableName);
#16 18.99     [javac]                              ^
#16 18.99     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:197: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 18.99     [javac]     Variable variable = group.findVariable(variableName);
#16 18.99     [javac]                              ^
#16 18.99     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:200: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 18.99     [javac]       List<Attribute> attributes = variable.getAttributes();
#16 18.99     [javac]                                            ^
#16 18.99     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getName() in CDMNode has been deprecated
#16 18.99     [javac]       String groupName = group.getName();
#16 18.99     [javac]                               ^
#16 18.99     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:239: warning: [deprecation] getAttributes() in Group has been deprecated
#16 18.99     [javac]       List<Attribute> attributes = group.getAttributes();
#16 18.99     [javac]                                         ^
#16 18.99     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:247: warning: [deprecation] getName() in CDMNode has been deprecated
#16 18.99     [javac]         String variableName = variable.getName();
#16 18.99     [javac]                                       ^
#16 18.99     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:270: warning: [deprecation] findGroup(String) in Group has been deprecated
#16 18.99     [javac]       Group nextParent = parent.findGroup(token);
#16 18.99     [javac]                                ^
#16 19.03     [javac] Note: Some input files use unchecked or unsafe operations.
#16 19.03     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 19.03     [javac] 19 warnings
#16 19.03 
#16 19.03 formats-gpl.jar:
#16 19.04       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 19.21 [resolver:install] Using default POM (ome:formats-gpl:8.3.0-SNAPSHOT)
#16 19.21 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.pom
#16 19.21 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.jar
#16 19.22 [resolver:install] Installing ome:formats-gpl:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 19.22 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 19.22 
#16 19.22 deps-bio-formats-plugins:
#16 19.22 
#16 19.22 jar-bio-formats-plugins:
#16 19.32      [echo] isSnapshot = true
#16 19.46 
#16 19.46 init-title:
#16 19.46      [echo] ----------=========== bio-formats_plugins ===========----------
#16 19.46 
#16 19.46 init-timestamp:
#16 19.46 
#16 19.46 init:
#16 19.46 
#16 19.46 copy-resources:
#16 19.46     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 19.46      [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 19.46 
#16 19.46 compile:
#16 19.72 [resolver:resolve] Resolving artifacts
#16 19.74     [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 19.95     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 19.95     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 19.95     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 19.95     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 20.85     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.85     [javac] import loci.common.ReflectedUniverse;
#16 20.85     [javac]                   ^
#16 20.85     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.85     [javac] import loci.common.ReflectedUniverse;
#16 20.85     [javac]                   ^
#16 21.25     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 21.25     [javac]     "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 21.25     [javac]                                      ^
#16 21.35     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/InstallWizard.java:119: warning: [deprecation] URL(String) in URL has been deprecated
#16 21.35     [javac]     URL url = new URL(urlPath);
#16 21.35     [javac]               ^
#16 21.45     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 21.45     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 21.45     [javac]         ^
#16 21.45     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 21.45     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 21.45     [javac]                                   ^
#16 21.55     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 21.55     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 21.55     [javac]     ^
#16 21.55     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 21.55     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 21.55     [javac]                                ^
#16 21.75     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/shortcut/ShortcutPanel.java:102: warning: [deprecation] URL(String) in URL has been deprecated
#16 21.75     [javac]       url = new URL(path);
#16 21.75     [javac]             ^
#16 21.95     [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 21.95     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 21.95     [javac] 13 warnings
#16 21.95 
#16 21.95 bio-formats-plugins.jar:
#16 21.95       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 21.99 [resolver:install] Using default POM (ome:bio-formats_plugins:8.3.0-SNAPSHOT)
#16 21.99 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.pom
#16 22.00 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.jar
#16 22.00 [resolver:install] Installing ome:bio-formats_plugins:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 22.00 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 22.00 
#16 22.00 deps-bio-formats-tools:
#16 22.00 
#16 22.00 jar-bio-formats-tools:
#16 22.12      [echo] isSnapshot = true
#16 22.26 
#16 22.26 init-title:
#16 22.26      [echo] ----------=========== bio-formats-tools ===========----------
#16 22.26 
#16 22.26 init-timestamp:
#16 22.26 
#16 22.26 init:
#16 22.26 
#16 22.26 copy-resources:
#16 22.26     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 22.26 
#16 22.26 compile:
#16 22.55 [resolver:resolve] Resolving artifacts
#16 22.56     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 22.77     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 22.77     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 22.77     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 22.77     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 23.92     [javac] 4 warnings
#16 23.92 
#16 23.92 bio-formats-tools.jar:
#16 23.93       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 23.93 [resolver:install] Using default POM (ome:bio-formats-tools:8.3.0-SNAPSHOT)
#16 23.94 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.pom
#16 23.94 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.jar
#16 23.94 [resolver:install] Installing ome:bio-formats-tools:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 23.94 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 23.94 
#16 23.94 deps-tests:
#16 23.94 
#16 23.94 jar-tests:
#16 24.04      [echo] isSnapshot = true
#16 24.18 
#16 24.18 init-title:
#16 24.18      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 24.18 
#16 24.18 init-timestamp:
#16 24.18 
#16 24.18 init:
#16 24.18 
#16 24.18 copy-resources:
#16 24.18     [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 24.18 
#16 24.18 compile:
#16 24.50 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.57 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.91 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.93 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 25.51 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 25.93 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#16 25.94 [resolver:resolve] Resolving artifacts
#16 25.95 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.99 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 26.34 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 26.34 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 26.75 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 27.10 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 27.11     [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 27.32     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 27.32     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 27.32     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 27.32     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 28.42     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:676: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 28.42     [javac]         int index = unflattenedReader.getCoreIndex();
#16 28.42     [javac]                                      ^
#16 28.42     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:677: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 28.42     [javac]         reader.setCoreIndex(index);
#16 28.42     [javac]               ^
#16 28.62     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2339: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 28.62     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 28.62     [javac]                                              ^
#16 28.62     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2505: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 28.62     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 28.62     [javac]                                              ^
#16 28.92     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 28.92     [javac]         FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 28.92     [javac]                                                    ^
#16 28.92     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 28.92     [javac]         FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 28.92     [javac]                                                    ^
#16 28.92     [javac] Note: Some input files use unchecked or unsafe operations.
#16 28.92     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 28.92     [javac] 10 warnings
#16 28.94 
#16 28.94 tests.jar:
#16 28.95       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 28.96 [resolver:install] Using default POM (ome:test-suite:8.3.0-SNAPSHOT)
#16 28.96 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.3.0-SNAPSHOT/test-suite-8.3.0-SNAPSHOT.pom
#16 28.97 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.3.0-SNAPSHOT/test-suite-8.3.0-SNAPSHOT.jar
#16 28.97 [resolver:install] Installing ome:test-suite:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 28.97 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 28.97 
#16 28.97 jars:
#16 28.97 
#16 28.97 copy-jars:
#16 28.97 
#16 28.97 deps-formats-api:
#16 29.02      [echo] isSnapshot = true
#16 29.06 
#16 29.06 install-pom:
#16 29.23 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.3.0-SNAPSHOT/pom-bio-formats-8.3.0-SNAPSHOT.pom
#16 29.23 [resolver:install] Installing ome:pom-bio-formats:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 29.23 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 29.23 
#16 29.23 jar-formats-api:
#16 29.32      [echo] isSnapshot = true
#16 29.45 
#16 29.45 init-title:
#16 29.45      [echo] ----------=========== formats-api ===========----------
#16 29.45 
#16 29.45 init-timestamp:
#16 29.45 
#16 29.45 init:
#16 29.45 
#16 29.45 copy-resources:
#16 29.45 
#16 29.45 compile:
#16 29.58 [resolver:resolve] Resolving artifacts
#16 29.59 
#16 29.59 formats-api.jar:
#16 29.61 [resolver:install] Using default POM (ome:formats-api:8.3.0-SNAPSHOT)
#16 29.61 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/formats-api-8.3.0-SNAPSHOT.pom
#16 29.62 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/formats-api-8.3.0-SNAPSHOT.jar
#16 29.62 [resolver:install] Installing ome:formats-api:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 29.62 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 29.62 
#16 29.62 deps-turbojpeg:
#16 29.62 
#16 29.62 jar-turbojpeg:
#16 29.72      [echo] isSnapshot = true
#16 29.85 
#16 29.85 init-title:
#16 29.85      [echo] ----------=========== turbojpeg ===========----------
#16 29.85 
#16 29.85 init-timestamp:
#16 29.85 
#16 29.85 init:
#16 29.85 
#16 29.85 copy-resources:
#16 29.85 
#16 29.85 compile:
#16 29.86 [resolver:resolve] Resolving artifacts
#16 29.86 
#16 29.86 jar:
#16 29.86 [resolver:install] Using default POM (ome:turbojpeg:8.3.0-SNAPSHOT)
#16 29.87 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/turbojpeg-8.3.0-SNAPSHOT.pom
#16 29.87 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/turbojpeg-8.3.0-SNAPSHOT.jar
#16 29.87 [resolver:install] Installing ome:turbojpeg:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 29.87 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 29.88 
#16 29.88 deps-formats-bsd:
#16 29.88 
#16 29.88 jar-formats-bsd:
#16 29.96      [echo] isSnapshot = true
#16 30.09 
#16 30.09 init-title:
#16 30.09      [echo] ----------=========== formats-bsd ===========----------
#16 30.09 
#16 30.09 init-timestamp:
#16 30.09 
#16 30.09 init:
#16 30.09 
#16 30.09 copy-resources:
#16 30.09 
#16 30.09 compile:
#16 30.30 [resolver:resolve] Resolving artifacts
#16 30.32 
#16 30.32 formats-bsd.jar:
#16 30.36 [resolver:install] Using default POM (ome:formats-bsd:8.3.0-SNAPSHOT)
#16 30.36 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/formats-bsd-8.3.0-SNAPSHOT.pom
#16 30.36 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/formats-bsd-8.3.0-SNAPSHOT.jar
#16 30.36 [resolver:install] Installing ome:formats-bsd:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 30.36 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 30.37 
#16 30.37 deps-formats-gpl:
#16 30.37 
#16 30.37 jar-formats-gpl:
#16 30.45      [echo] isSnapshot = true
#16 30.58 
#16 30.58 init-title:
#16 30.58      [echo] ----------=========== formats-gpl ===========----------
#16 30.58 
#16 30.58 init-timestamp:
#16 30.58 
#16 30.58 init:
#16 30.58 
#16 30.58 copy-resources:
#16 30.58 
#16 30.58 compile:
#16 30.82 [resolver:resolve] Resolving artifacts
#16 30.84 
#16 30.84 formats-gpl.jar:
#16 30.87 [resolver:install] Using default POM (ome:formats-gpl:8.3.0-SNAPSHOT)
#16 30.88 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.pom
#16 30.88 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.jar
#16 30.88 [resolver:install] Installing ome:formats-gpl:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 30.88 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 30.88 
#16 30.88 deps-bio-formats-plugins:
#16 30.88 
#16 30.88 jar-bio-formats-plugins:
#16 30.97      [echo] isSnapshot = true
#16 31.10 
#16 31.10 init-title:
#16 31.10      [echo] ----------=========== bio-formats_plugins ===========----------
#16 31.10 
#16 31.10 init-timestamp:
#16 31.10 
#16 31.10 init:
#16 31.10 
#16 31.10 copy-resources:
#16 31.10 
#16 31.10 compile:
#16 31.35 [resolver:resolve] Resolving artifacts
#16 31.37 
#16 31.37 bio-formats-plugins.jar:
#16 31.38 [resolver:install] Using default POM (ome:bio-formats_plugins:8.3.0-SNAPSHOT)
#16 31.38 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.pom
#16 31.38 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.jar
#16 31.38 [resolver:install] Installing ome:bio-formats_plugins:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 31.39 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 31.39 
#16 31.39 deps-bio-formats-tools:
#16 31.39 
#16 31.39 jar-bio-formats-tools:
#16 31.48      [echo] isSnapshot = true
#16 31.61 
#16 31.61 init-title:
#16 31.61      [echo] ----------=========== bio-formats-tools ===========----------
#16 31.61 
#16 31.61 init-timestamp:
#16 31.61 
#16 31.61 init:
#16 31.61 
#16 31.61 copy-resources:
#16 31.61 
#16 31.61 compile:
#16 31.85 [resolver:resolve] Resolving artifacts
#16 31.86 
#16 31.86 bio-formats-tools.jar:
#16 31.86 [resolver:install] Using default POM (ome:bio-formats-tools:8.3.0-SNAPSHOT)
#16 31.87 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.pom
#16 31.87 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.jar
#16 31.87 [resolver:install] Installing ome:bio-formats-tools:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 31.87 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 31.87 
#16 31.87 deps-tests:
#16 31.87 
#16 31.87 jar-tests:
#16 31.96      [echo] isSnapshot = true
#16 32.14 
#16 32.14 init-title:
#16 32.14      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 32.14 
#16 32.14 init-timestamp:
#16 32.14 
#16 32.14 init:
#16 32.14 
#16 32.14 copy-resources:
#16 32.14 
#16 32.14 compile:
#16 32.37 [resolver:resolve] Resolving artifacts
#16 32.38 
#16 32.38 tests.jar:
#16 32.39 [resolver:install] Using default POM (ome:test-suite:8.3.0-SNAPSHOT)
#16 32.39 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.3.0-SNAPSHOT/test-suite-8.3.0-SNAPSHOT.pom
#16 32.40 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.3.0-SNAPSHOT/test-suite-8.3.0-SNAPSHOT.jar
#16 32.40 [resolver:install] Installing ome:test-suite:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 32.40 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 32.40 
#16 32.40 jars:
#16 32.40 
#16 32.40 tools:
#16 32.40      [echo] ----------=========== bioformats_package ===========----------
#16 32.49      [echo] isSnapshot = true
#16 32.62 
#16 32.62 init-timestamp:
#16 32.62 
#16 32.62 bundle:
#16 32.87 [resolver:resolve] Resolving artifacts
#16 32.88     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.92     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.26-SNAPSHOT/ome-common-6.0.26-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.94     [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.97     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.98     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.05     [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.07     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.13     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.14     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.14.2/jackson-databind-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.39     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.45     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.48     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.54     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.55     [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.57     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.57     [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.7/joda-time-2.12.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.76     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.1-jre/guava-32.0.1-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.35     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.36     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.36     [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.37     [unzip] Expanding: /home/build/.m2/repository/org/checkerframework/checker-qual/3.33.0/checker-qual-3.33.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.46     [unzip] Expanding: /home/build/.m2/repository/com/google/errorprone/error_prone_annotations/2.18.0/error_prone_annotations-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.47     [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.47     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.5.0-SNAPSHOT/ome-xml-6.5.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.59     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.5.0-SNAPSHOT/specification-6.5.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.66     [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/formats-api-8.3.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.68     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.1.1-SNAPSHOT/ome-codecs-1.1.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.69     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-jai/0.1.5-SNAPSHOT/ome-jai-0.1.5-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.85     [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/formats-bsd-8.3.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.94     [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/turbojpeg-8.3.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.99     [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.99     [unzip] Expanding: /home/build/.m2/repository/commons-lang/commons-lang/2.6/commons-lang-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.04     [unzip] Expanding: /home/build/.m2/repository/org/perf4j/perf4j/0.9.16/perf4j-0.9.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.06     [unzip] Expanding: /home/build/.m2/repository/cisd/jhdf5/19.04.1/jhdf5-19.04.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.63     [unzip] Expanding: /home/build/.m2/repository/cisd/base/18.09.0/base-18.09.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.65     [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.69     [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-lang3/3.7/commons-lang3-3.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.77     [unzip] Expanding: /home/build/.m2/repository/com/drewnoakes/metadata-extractor/2.18.0/metadata-extractor-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.88     [unzip] Expanding: /home/build/.m2/repository/com/adobe/xmp/xmpcore/6.1.11/xmpcore-6.1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.90     [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.92     [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.93     [unzip] Expanding: /home/build/.m2/repository/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.19     [unzip] Expanding: /home/build/.m2/repository/xml-apis/xml-apis/1.4.01/xml-apis-1.4.01.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.30     [unzip] Expanding: /home/build/.m2/repository/org/yaml/snakeyaml/2.0/snakeyaml-2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.37     [unzip] Expanding: /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.48     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/ome-mdbtools-5.3.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.50     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/metakit-5.8.9-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.50     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/ome-poi-5.3.10-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.64     [unzip] Expanding: /home/build/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.65     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.32     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.33     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.46     [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.52     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.13/httpmime-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.53     [unzip] Expanding: /home/build/.m2/repository/com/google/re2j/re2j/1.3/re2j-1.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.54     [unzip] Expanding: /home/build/.m2/repository/commons-math/commons-math/1.2/commons-math-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.60     [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/0.27/aircompressor-0.27.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.64     [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.49.1.0/sqlite-jdbc-3.49.1.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 38.05     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 38.07     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 38.08     [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 38.09     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 38.09     [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 38.13     [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 38.57     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.15/logback-core-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 38.69     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.15/logback-classic-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 39.14       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 46.65    [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 47.38 [resolver:install] Using default POM (ome:bioformats_package:8.3.0-SNAPSHOT)
#16 47.39 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.3.0-SNAPSHOT/bioformats_package-8.3.0-SNAPSHOT.pom
#16 47.39 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.3.0-SNAPSHOT/bioformats_package-8.3.0-SNAPSHOT.jar
#16 47.43 [resolver:install] Installing ome:bioformats_package:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 47.44 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 47.44 
#16 47.44 BUILD SUCCESSFUL
#16 47.44 Total time: 46 seconds
#16 DONE 48.2s

#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.0s

#18 exporting to image
#18 exporting layers
#18 exporting layers 4.0s done
#18 writing image sha256:d4c55d902e0fcb4f7854778b1a3d565df9f932509ee567d6a3143790d285d826 done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 4.0s

 [33m1 warning found (use docker --debug to expand):
[0m - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS