23:27:13Started by upstream project "Trigger" build number 10223:27:13originally caused by:
23:27:13 Started by timer
23:27:13Running as SYSTEM
23:27:13Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
23:27:13The recommended git tool is: NONE
23:27:13No credentials specified
23:27:13 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
23:27:13Fetching changes from the remote Git repository
23:27:13 > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
23:27:13Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git23:27:13 > git --version # timeout=10
23:27:13 > git --version # 'git version 2.52.0'
23:27:13 > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
23:27:19 > git rev-parse origin/merge_ci^{commit} # timeout=10
23:27:19Checking out Revision 6bb14ebd29ec9ff755a026a6391a6679553ff661 (origin/merge_ci)
23:27:19 > git config core.sparsecheckout # timeout=10
23:27:19 > git checkout -f 6bb14ebd29ec9ff755a026a6391a6679553ff661 # timeout=10
23:27:22Commit message: "Add version.properties to etc/omero.properties"
23:27:22 > git rev-list --no-walk 83a16dadfd447cb245400b0e2ade0ecd60c5e7d7 # timeout=10
23:27:22Cleaning workspace
23:27:22 > git rev-parse --verify HEAD # timeout=10
23:27:22Resetting working tree
23:27:22 > git reset --hard # timeout=10
23:27:22 > git clean -fdx # timeout=10
23:28:09Copied 6 artifacts from "OMERO-python-superbuild-build" build number 7423:28:09[OMERO-build] $ /bin/bash -xe /tmp/jenkins18144454554665091302.sh
23:28:09+ mv omero-scripts/dist/omero_scripts-5.10.1.dev0.tar.gz .
23:28:09+ cd src
23:28:09+ export OMERO_BRANCH=merge_ci
23:28:09+ OMERO_BRANCH=merge_ci
23:28:09+ OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
23:28:09+ rm -rf /home/omero/workspace/OMERO-build/omero-virtualenv
23:28:48+ source /home/omero/settings.env
23:28:48++ OMERO_DB_HOST=pg
23:28:48++ OMERO_DB_USER=postgres
23:28:48++ OMERO_DB_PASS=
23:28:48++ OMERO_ROOT_PASS=omero
23:28:48++ OMERO_DATA_DIR=/OMERO
23:28:48++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
23:28:48+ python3.11 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
23:29:07+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl23:29:08Collecting zeroc-ice==3.6.5
23:29:09 Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
23:29:11 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 11.8 MB/s eta 0:00:00
23:29:12Installing collected packages: zeroc-ice
23:29:16Successfully installed zeroc-ice-3.6.5
23:29:1623:29:16[notice] A new release of pip available: 22.3.1 -> 26.2.1
23:29:16[notice] To update, run: python3.11 -m pip install --upgrade pip
23:29:16+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U 'setuptools<66' omero-py
23:29:17Requirement already satisfied: setuptools<66 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (65.5.1)
23:29:17Collecting setuptools<66
23:29:17 Using cached setuptools-65.7.0-py3-none-any.whl (1.2 MB)
23:29:18Collecting omero-py
23:29:18 Using cached omero_py-5.23.0-py3-none-any.whl (2.8 MB)
23:29:18Collecting appdirs
23:29:18 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
23:29:18Collecting future
23:29:18 Using cached future-1.0.0-py3-none-any.whl (491 kB)
23:29:19Collecting numpy<3,>=2
23:29:19 Using cached numpy-2.4.6-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
23:29:19Collecting Pillow>=10.0.0
23:29:19 Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (6.9 MB)
23:29:20Collecting PyYAML
23:29:20 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
23:29:20Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (from omero-py) (3.6.5)
23:29:20Collecting requests
23:29:20 Using cached requests-2.34.2-py3-none-any.whl (73 kB)
23:29:20Collecting portalocker
23:29:20 Downloading portalocker-4.4.0-py3-none-any.whl (129 kB)
23:29:20 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 129.6/129.6 kB 1.8 MB/s eta 0:00:00
23:29:20Collecting charset_normalizer<4,>=2
23:29:21 Using cached charset_normalizer-3.5.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (262 kB)
23:29:21Collecting idna<4,>=2.5
23:29:21 Using cached idna-3.20-py3-none-any.whl (69 kB)
23:29:21Collecting urllib3<3,>=1.26
23:29:21 Using cached urllib3-2.8.0-py3-none-any.whl (135 kB)
23:29:21Collecting certifi>=2023.5.7
23:29:21 Using cached certifi-2026.7.22-py3-none-any.whl (136 kB)
23:29:21Installing collected packages: appdirs, urllib3, setuptools, PyYAML, portalocker, Pillow, numpy, idna, future, charset_normalizer, certifi, requests, omero-py
23:29:22 Attempting uninstall: setuptools
23:29:22 Found existing installation: setuptools 65.5.1
23:29:23 Uninstalling setuptools-65.5.1:
23:29:24 Successfully uninstalled setuptools-65.5.1
23:30:18Successfully installed Pillow-12.3.0 PyYAML-6.0.3 appdirs-1.4.4 certifi-2026.7.22 charset_normalizer-3.5.1 future-1.0.0 idna-3.20 numpy-2.4.6 omero-py-5.23.0 portalocker-4.4.0 requests-2.34.2 setuptools-65.7.0 urllib3-2.8.0
23:30:1823:30:18[notice] A new release of pip available: 22.3.1 -> 26.2.1
23:30:18[notice] To update, run: python3.11 -m pip install --upgrade pip
23:30:19+ source /home/omero/workspace/OMERO-build/omero-virtualenv/bin/activate
23:30:19++ deactivate nondestructive
23:30:19++ '[' -n '' ']'
23:30:19++ '[' -n '' ']'
23:30:19++ hash -r
23:30:19++ '[' -n '' ']'
23:30:19++ unset VIRTUAL_ENV
23:30:19++ unset VIRTUAL_ENV_PROMPT
23:30:19++ '[' '!' nondestructive = nondestructive ']'
23:30:19++ VIRTUAL_ENV=/home/omero/workspace/OMERO-build/omero-virtualenv
23:30:19++ export VIRTUAL_ENV
23:30:19++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
23:30:19++ PATH=/home/omero/workspace/OMERO-build/omero-virtualenv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
23:30:19++ export PATH
23:30:19++ '[' -n '' ']'
23:30:19++ '[' -z '' ']'
23:30:19++ _OLD_VIRTUAL_PS1=
23:30:19++ PS1='(omero-virtualenv) '
23:30:19++ export PS1
23:30:19++ VIRTUAL_ENV_PROMPT='(omero-virtualenv) '
23:30:19++ export VIRTUAL_ENV_PROMPT
23:30:19++ hash -r
23:30:19+ source docs/hudson/OMERO.sh
23:30:19++ set -e
23:30:19++ set -u
23:30:19++ set -x
23:30:19++ source docs/hudson/functions.sh
23:30:19++ echo Building merge_ci
23:30:19Building merge_ci
23:30:19++ python3 ./build.py build-dev release-all
23:30:19Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
23:30:2023:30:20check-ivy:
23:30:20Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
23:30:20Created dir: /home/omero/workspace/OMERO-build/src/target
23:30:21:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
23:30:21:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
23:30:2323:30:23build-scons:
23:30:23Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
23:30:25No sub-builds to iterate on
23:30:25Entering /home/omero/workspace/OMERO-build/src/components/tools...
23:30:2623:30:26buildlist:
23:30:26:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
23:30:26:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
23:30:2623:30:26clean:
23:30:26Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
23:30:26Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
23:30:2723:30:27python-clean:
23:30:27WARNING: '' not a valid package name; please use only .-separated package names in setup.py
23:30:27/home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-666-6bb14ebd29-ice36-b83') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
23:30:27 warnings.warn(
23:30:27running clean
23:30:27Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
23:30:28Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
23:30:2823:30:28python-clean:
23:30:28WARNING: '' not a valid package name; please use only .-separated package names in setup.py
23:30:28/home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-666-6bb14ebd29-ice36-b83') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
23:30:28 warnings.warn(
23:30:28running clean
23:30:28Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
23:30:29Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
23:30:29Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
23:30:29Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
23:30:3023:30:30python-clean:
23:30:30WARNING: '' not a valid package name; please use only .-separated package names in setup.py
23:30:30/home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-666-6bb14ebd29-ice36-b83') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
23:30:30 warnings.warn(
23:30:30running clean
23:30:30Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
23:30:30Deleting directory /home/omero/workspace/OMERO-build/src/target
23:30:3123:30:31build-scons:
23:30:31Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
23:30:3323:30:33build:
23:30:33No sub-builds to iterate on
23:30:33Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
23:30:34Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
23:30:35Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
23:30:35Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
23:30:3523:30:35tools-init:
23:30:35no-op
23:30:3523:30:35retrieve:
23:30:35:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
23:30:35:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
23:33:0523:33:05prepare:
23:33:05Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
23:33:05Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
23:33:06Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
23:33:06Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
23:33:06Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
23:33:06Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
23:33:06Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
23:33:06Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
23:33:06Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
23:33:06Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
23:33:06Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
23:33:06Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
23:33:06Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
23:33:06Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
23:33:06Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
23:33:0623:33:06pre-compile:
23:33:06Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
23:33:07Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
23:33:17Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
23:33:24Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
23:33:24Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
23:33:2723:33:27compile:
23:33:27no-op
23:33:2723:33:27package:
23:33:27Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
23:33:3323:33:33install:
23:33:33:: delivering :: omero#omero_client;working@5ffef7c1fdfa :: 5.6.3-666-6bb14ebd29-ice36-b83 :: integration :: Sat Sep 19 23:30:35 UTC 2026
23:33:33 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
23:33:33:: publishing :: omero#omero_client
23:33:33 published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-666-6bb14ebd29-ice36-b83/omero_client-5.6.3-666-6bb14ebd29-ice36-b83.jar
23:33:33 published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-666-6bb14ebd29-ice36-b83/omero_client-5.6.3-666-6bb14ebd29-ice36-b83.xml
23:33:34Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
23:33:34Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
23:33:3423:33:34retrieve:
23:33:34:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
23:33:34:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
23:33:36Entering /home/omero/workspace/OMERO-build/src/components/tools...
23:33:3623:33:36dist:
23:33:36Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
23:33:36Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
23:33:36Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
23:33:36Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.10.1.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
23:33:37Copying 29 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
23:33:37Copying 29 files to /home/omero/workspace/OMERO-build/src/dist
23:33:37Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
23:33:38Entering /home/omero/workspace/OMERO-build/src/components/tests...
23:33:39Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
23:33:4023:33:40copy-licenses:
23:33:40Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
23:33:40Created dir: /home/omero/workspace/OMERO-build/src/dist/share
23:33:40Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
23:33:4023:33:40copy-history:
23:33:40Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
23:33:4123:33:41copy-etc:
23:33:41Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
23:33:41Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
23:33:4223:33:42copy-sql:
23:33:42Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
23:34:1323:34:13copy-server:
23:34:13 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/janino.jar in [server]: 3.1.9 won
23:34:13 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/annotations.jar in [server]: 2.34.6 won
23:34:2223:34:22copy-client:
23:34:22Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/client
23:34:30 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/janino.jar in [client]: 3.1.9 won
23:34:30 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/annotations.jar in [client]: 2.34.6 won
23:34:3623:34:36update-version:
23:34:36Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc
23:34:3623:34:36create-workdirs:
23:34:36Created dir: /home/omero/workspace/OMERO-build/src/dist/etc/grid
23:34:36Created dir: /home/omero/workspace/OMERO-build/src/dist/var
23:34:36Created dir: /home/omero/workspace/OMERO-build/src/dist/var/tmp
23:34:3623:34:36copy-luts:
23:34:36Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
23:34:36Copying 47 files to /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
23:34:3723:34:37test-compile:
23:34:37:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
23:34:38Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
23:34:39Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
23:34:39Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
23:34:39Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
23:34:39Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
23:34:40Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
23:34:41Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
23:34:4123:34:41testng-init:
23:34:41:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
23:34:41:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
23:34:5523:34:54,711 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.16
23:34:5523:34:54,713 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2b3d5c09 - No custom configurators were discovered as a service.
23:34:5523:34:54,713 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2b3d5c09 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
23:34:5523:34:54,717 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2b3d5c09 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
23:34:5523:34:54,725 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
23:34:5523:34:54,729 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
23:34:5523:34:54,729 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2b3d5c09 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 12 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
23:34:5523:34:54,729 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2b3d5c09 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
23:34:5523:34:54,731 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2b3d5c09 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
23:34:5523:34:54,737 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
23:34:5523:34:54,739 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
23:34:5523:34:54,743 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@d609083 - Resource [logback.xml] occurs multiple times on the classpath.
23:34:5523:34:54,743 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@d609083 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
23:34:5523:34:54,743 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@d609083 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
23:34:5523:34:54,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
23:34:5523:34:54,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
23:34:5523:34:54,959 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
23:34:5523:34:54,961 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@74d294f4 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
23:34:5523:34:54,961 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@74d294f4 - Please move "immediateFlush" property into the enclosing appender.
23:34:5523:34:55,032 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@74d294f4 - Setting the "immediateFlush" property of the enclosing appender to true
23:34:5523:34:55,033 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
23:34:5523:34:55,033 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
23:34:5523:34:55,033 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
23:34:5523:34:55,033 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
23:34:5523:34:55,033 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
23:34:5523:34:55,033 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
23:34:5523:34:55,034 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@74ea5db2 - End of configuration.
23:34:5523:34:55,036 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@35f69a32 - Registering current configuration as safe fallback point
23:34:5523:34:55,036 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2b3d5c09 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 305 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
23:34:5523:34:55lifecycle.test-compile:
23:34:55Copying 3 files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
23:34:55Compiling 86 source files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
23:34:55warning: [options] bootstrap class path not set in conjunction with -source 8
23:34:55warning: [options] source value 8 is obsolete and will be removed in a future release
23:34:55warning: [options] target value 8 is obsolete and will be removed in a future release
23:34:55warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
23:34:58/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
23:34:58import omero.grid.RawAccessRequest;
23:34:58 ^
23:34:59/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
23:34:59import omero.grid.RawAccessRequest;
23:34:59 ^
23:34:59/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
23:34:59import omero.grid.RawAccessRequest;
23:34:59 ^
23:34:59/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
23:34:59import omero.model.ImportJob;
23:34:59 ^
23:34:59/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
23:34:59import omero.model.ImportJobI;
23:34:59 ^
23:35:00/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1207: warning: [deprecation] newInstance() in Class has been deprecated
23:35:00 IObject link = (IObject) linkClass.newInstance();
23:35:00 ^
23:35:00 where T is a type-variable:
23:35:00 T extends Object declared in class Class
23:35:00/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
23:35:00 T copy = (T) obj.getClass().newInstance();
23:35:00 ^
23:35:00 where T is a type-variable:
23:35:00 T extends Object declared in class Class
23:35:00/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
23:35:00 RawAccessRequest raw = new RawAccessRequest();
23:35:00 ^
23:35:00/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
23:35:00 RawAccessRequest raw = new RawAccessRequest();
23:35:00 ^
23:35:00/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
23:35:00 raw.repoUuid = legacy.root().getHash().getValue();
23:35:00 ^
23:35:00/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
23:35:00 raw.command = "rm";
23:35:00 ^
23:35:00/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
23:35:00 raw.args = Arrays.asList(path);
23:35:00 ^
23:35:00/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
23:35:00 final IObject link = linkClass.newInstance();
23:35:00 ^
23:35:00 where T is a type-variable:
23:35:00 T extends Object declared in class Class
23:35:01/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
23:35:01 originalLink.setChild(annotationClass.newInstance());
23:35:01 ^
23:35:01 where T is a type-variable:
23:35:01 T extends Object declared in class Class
23:35:01/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
23:35:01 RoiResult r = svc.findByImage(id, new RoiOptions());
23:35:01 ^
23:35:01/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
23:35:01 final RawAccessRequest request = new RawAccessRequest();
23:35:01 ^
23:35:01/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
23:35:01 final RawAccessRequest request = new RawAccessRequest();
23:35:01 ^
23:35:01/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
23:35:01 request.repoUuid = repo.root().getHash().getValue();
23:35:01 ^
23:35:01/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
23:35:01 request.command = "exists";
23:35:01 ^
23:35:01/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
23:35:01 request.args = Collections.singletonList(dirPath);
23:35:01 ^
23:35:01/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
23:35:01 final RawAccessRequest request = new RawAccessRequest();
23:35:01 ^
23:35:01/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
23:35:01 final RawAccessRequest request = new RawAccessRequest();
23:35:01 ^
23:35:01/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
23:35:01 request.repoUuid = repo.root().getHash().getValue();
23:35:01 ^
23:35:01/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
23:35:01 request.command = "exists";
23:35:01 ^
23:35:01/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
23:35:01 request.args = Collections.singletonList(dirName);
23:35:01 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactoryTest.java:60: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
23:35:02 RoiResult result = roiSvc.findByImage(imageId, new RoiOptions());
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
23:35:02 final ImportJob importJob = new ImportJobI();
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
23:35:02 final ImportJob importJob = new ImportJobI();
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
23:35:02 importJob.setImageName(omero.rtypes.rstring(name));
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
23:35:02 importJob.setImageDescription(omero.rtypes.rstring(desc));
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
23:35:02 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
23:35:02 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
23:35:02 final String savedName = sent.getImageName().getValue().toString();
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
23:35:02 final String savedDesc = sent.getImageDescription().getValue().toString();
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
23:35:02 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
23:35:02 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
23:35:02 final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
23:35:02 final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
23:35:02 RoiResult r = svc.findByImage(image.getId().getValue(),
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
23:35:02 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
23:35:02 l = svc.getRoiMeasurements(image.getId().getValue(), options);
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
23:35:02 l = svc.getRoiMeasurements(image.getId().getValue(), options);
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
23:35:02 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
23:35:02 Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
23:35:02 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
23:35:02 table = svc.getTable(f.getId().getValue());
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
23:35:02 RoiResult r = svc.findByImage(image.getId().getValue(),
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
23:35:02 r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
23:35:02 r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
23:35:02 r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
23:35:02 r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:35:02 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:35:02 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:35:02 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:35:02 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Long(long) in Long has been deprecated and marked for removal
23:35:02 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:35:02 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:35:02 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:35:02 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:35:02 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:35:02 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:35:02 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:35:02 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:35:02 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:35:02 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:35:02 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:35:02 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:35:02 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
23:35:02 svc.getShapeStatsRestricted(
23:35:02 ^
23:35:02/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
23:35:02 final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
23:35:02 ^
23:35:03/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
23:35:03 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
23:35:03 ^
23:35:03/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
23:35:03 request.typesToIgnore = Collections.singletonList("TagAnnotation");
23:35:03 ^
23:35:03/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
23:35:03 request.typesToIgnore = Collections.singletonList("IAnnotationLink");
23:35:03 ^
23:35:03/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
23:35:03 request.typesToIgnore = Collections.singletonList("Annotation");
23:35:03 ^
23:35:03/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
23:35:03 request.typesToIgnore = Collections.singletonList("Annotation");
23:35:03 ^
23:35:03/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
23:35:03 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
23:35:03 ^
23:35:03/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
23:35:03 p2.setRelatedTo(p1);
23:35:03 ^
23:35:03/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
23:35:03 Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
23:35:03 ^
23:35:03/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
23:35:03 pixels1.setRelatedTo(pixels2);
23:35:03 ^
23:35:03/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
23:35:03 Pixels pixels = pixels1.getRelatedTo();
23:35:03 ^
23:35:03/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
23:35:03 Assert.assertNull(pixels1.getRelatedTo());
23:35:03 ^
23:35:03/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
23:35:03 pixels1.setRelatedTo(pixels2);
23:35:03 ^
23:35:03/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
23:35:03 Pixels pixels = pixels1.getRelatedTo();
23:35:03 ^
23:35:03/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
23:35:03 Assert.assertNull(pixels1.getRelatedTo());
23:35:03 ^
23:35:03/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
23:35:03 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
23:35:03 ^
23:35:03/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
23:35:03 l = svc.getRoiMeasurements(image.getId().getValue(), options);
23:35:03 ^
23:35:03/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
23:35:03 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
23:35:03 ^
23:35:03/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
23:35:03 l = svc.getRoiMeasurements(image.getId().getValue(), options);
23:35:03 ^
23:35:03Note: Some input files use unchecked or unsafe operations.
23:35:03Note: Recompile with -Xlint:unchecked for details.
23:35:0392 warnings
23:35:04Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/_omero_build_695832021.tmp
23:35:04Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.jar
23:35:04:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
23:35:04:: delivering :: omero#OmeroJava-test;working@5ffef7c1fdfa :: 5.6.3-666-6bb14ebd29-ice36-b83 :: integration :: Sat Sep 19 23:34:40 UTC 2026
23:35:04 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.xml
23:35:04:: publishing :: omero#OmeroJava-test
23:35:04 published OmeroJava-test to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-666-6bb14ebd29-ice36-b83.jar
23:35:04 published ivy to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-666-6bb14ebd29-ice36-b83.xml
23:35:0423:35:04build-eclipse:
23:35:04No sub-builds to iterate on
23:35:05Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
23:35:0523:35:05retrieve:
23:35:05:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
23:35:05:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
23:35:1123:35:11prepare:
23:35:11Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
23:35:1623:35:16release-clients:
23:35:16Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.java-5.6.3-666-6bb14ebd29-ice36-b83.zip
23:35:2423:35:24release-zip:
23:35:24Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.server-5.6.3-666-6bb14ebd29-ice36-b83.zip
23:35:3823:35:38BUILD SUCCESSFUL
23:35:38Total time: 5 minutes 19 seconds
23:35:38++ '[' -d .git ']'
23:35:38++ python3 ./build.py release-src
23:35:38Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
23:35:4023:35:40release-src-git:
23:35:40Releasing openmicroscopy-5.6.3-666-6bb14ebd29-ice36-b83
23:35:42 - creating /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-666-6bb14ebd29-ice36-b83.zip
23:35:42 - repacking /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-666-6bb14ebd29-ice36-b83-base.zip
23:35:4323:35:43BUILD SUCCESSFUL
23:35:43Total time: 4 seconds
23:35:43++ echo BUILD_NUMBER=83
23:35:43++ echo OMERO_BRANCH=merge_ci
23:35:43++ git_info
23:35:43+++ git rev-parse HEAD
23:35:43++ HEAD=6bb14ebd29ec9ff755a026a6391a6679553ff661
23:35:43++ git log --max-count=1 6bb14ebd29ec9ff755a026a6391a6679553ff661
23:35:43++ env
23:35:43++ sort
23:35:43Archiving artifacts
23:36:00Finished: SUCCESS
