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+ export BASE_REPO=omero-insight.git
+ BASE_REPO=omero-insight.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-insight-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-insight-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-09-07 00:59:43,504 [  scc.config] DEBUG Found github.token
2024-09-07 00:59:43,509 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-09-07 00:59:43,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-07 00:59:44,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-07 00:59:44,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-09-07 00:59:44,449 [      scc.gh] DEBUG 2424 remaining from 5000 (Reset at 01:09
2024-09-07 00:59:44,450 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-07 00:59:44,453 [     scc.git] DEBUG Check current status
2024-09-07 00:59:44,454 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-07 00:59:44,457 [     scc.git] DEBUG efbf7e35c Bump version: 5.8.4 → 5.8.5-SNAPSHOT
2024-09-07 00:59:44,458 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-07 00:59:44,501 [  scc.config] DEBUG Found remote.origin.url
2024-09-07 00:59:44,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None
2024-09-07 00:59:45,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-07 00:59:45,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-07 00:59:46,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-07 00:59:46,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-07 00:59:46,527 [     scc.git] DEBUG Resetting...
2024-09-07 00:59:46,527 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-09-07 00:59:46,549 [     scc.git] DEBUG HEAD is now at efbf7e35c Bump version: 5.8.4 → 5.8.5-SNAPSHOT
2024-09-07 00:59:46,549 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-09-07 00:59:46,595 [     scc.git] DEBUG Check current status
2024-09-07 00:59:46,596 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-07 00:59:46,601 [     scc.git] DEBUG efbf7e35c Bump version: 5.8.4 → 5.8.5-SNAPSHOT
2024-09-07 00:59:46,602 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-07 00:59:46,648 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-09-07 00:59:46,648 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-09-07 00:59:46,648 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-09-07 00:59:46,648 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-09-07 00:59:46,648 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-09-07 00:59:46,648 [    scc.repo] DEBUG ## PRs found:
2024-09-07 00:59:47,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None
2024-09-07 00:59:47,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/446 HTTP/1.1" 200 None
2024-09-07 00:59:47,544 [    scc.repo] DEBUG   - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-07 00:59:48,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445 HTTP/1.1" 200 None
2024-09-07 00:59:48,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445/comments HTTP/1.1" 200 None
2024-09-07 00:59:48,484 [    scc.repo] DEBUG   - PR 445 dominikl 'Bump gateway'
2024-09-07 00:59:48,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444 HTTP/1.1" 200 None
2024-09-07 00:59:49,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444/comments HTTP/1.1" 200 None
2024-09-07 00:59:49,399 [    scc.repo] DEBUG   - PR 444 jburel 'fix endpoint'
2024-09-07 00:59:49,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443 HTTP/1.1" 200 None
2024-09-07 00:59:50,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442 HTTP/1.1" 200 None
2024-09-07 00:59:50,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442/comments HTTP/1.1" 200 None
2024-09-07 00:59:50,726 [    scc.repo] DEBUG   - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-07 00:59:51,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/437 HTTP/1.1" 200 None
2024-09-07 00:59:51,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436 HTTP/1.1" 200 None
2024-09-07 00:59:52,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436/comments HTTP/1.1" 200 None
2024-09-07 00:59:52,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385 HTTP/1.1" 200 None
2024-09-07 00:59:52,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385/comments HTTP/1.1" 200 None
2024-09-07 00:59:52,939 [    scc.repo] DEBUG   - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-07 00:59:53,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333 HTTP/1.1" 200 None
2024-09-07 00:59:53,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333/comments HTTP/1.1" 200 None
2024-09-07 00:59:54,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310 HTTP/1.1" 200 None
2024-09-07 00:59:54,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310/comments HTTP/1.1" 200 None
2024-09-07 00:59:54,867 [    scc.repo] DEBUG ## Branches found:
2024-09-07 00:59:54,867 [     scc.git] DEBUG Get sha1 of %s
2024-09-07 00:59:54,867 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-07 00:59:54,872 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-07 00:59:54,876 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-07 00:59:54,876 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-07 00:59:54,881 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-07 00:59:54,886 [     scc.git] DEBUG Already up to date.

2024-09-07 00:59:54,886 [     scc.git] DEBUG Calling 'git fetch origin pull/385/head'
2024-09-07 00:59:55,366 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-07 00:59:55,366 [     scc.git] DEBUG  * branch                refs/pull/385/head -> FETCH_HEAD
2024-09-07 00:59:55,373 [     scc.git] DEBUG Calling 'git fetch origin pull/442/head'
2024-09-07 00:59:55,738 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-07 00:59:55,739 [     scc.git] DEBUG  * branch                refs/pull/442/head -> FETCH_HEAD
2024-09-07 00:59:55,744 [     scc.git] DEBUG Calling 'git fetch origin pull/444/head'
2024-09-07 00:59:56,058 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-07 00:59:56,059 [     scc.git] DEBUG  * branch                refs/pull/444/head -> FETCH_HEAD
2024-09-07 00:59:56,065 [     scc.git] DEBUG Calling 'git fetch origin pull/445/head'
2024-09-07 00:59:56,359 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-07 00:59:56,359 [     scc.git] DEBUG  * branch                refs/pull/445/head -> FETCH_HEAD
2024-09-07 00:59:56,367 [     scc.git] DEBUG Calling 'git fetch origin pull/446/head'
2024-09-07 00:59:56,678 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-07 00:59:56,678 [     scc.git] DEBUG  * branch                refs/pull/446/head -> FETCH_HEAD
2024-09-07 00:59:56,686 [     scc.git] DEBUG ## Unique users: []
2024-09-07 00:59:56,686 [     scc.git] DEBUG Get sha1 of %s
2024-09-07 00:59:56,686 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-07 00:59:56,692 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-07 00:59:56,699 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-07 00:59:56,705 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 385 (handle case where ROI is not longer in table) 9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-07 00:59:56,835 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-07 00:59:56,839 [     scc.git] DEBUG  .../shoola/agents/measurement/view/ServerROITable.java      | 13 ++++++++++---
2024-09-07 00:59:56,839 [     scc.git] DEBUG  1 file changed, 10 insertions(+), 3 deletions(-)
2024-09-07 00:59:56,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-07 00:59:56,980 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-07 00:59:56,987 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-07 00:59:56,994 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 442 (Remove duplicate app_name parameter) 9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-07 00:59:57,091 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-07 00:59:57,095 [     scc.git] DEBUG  .../java/org/openmicroscopy/shoola/svc/proxy/MessengerRequest.java    | 4 +---
2024-09-07 00:59:57,095 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 3 deletions(-)
2024-09-07 00:59:57,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-07 00:59:57,359 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-07 00:59:57,366 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-07 00:59:57,371 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 444 (fix endpoint) 2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-07 00:59:57,500 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-07 00:59:57,505 [     scc.git] DEBUG  .../java/org/openmicroscopy/shoola/env/data/DataServicesFactory.java    | 2 +-
2024-09-07 00:59:57,505 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2024-09-07 00:59:57,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-07 00:59:57,735 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f9d5c87518fbe8273e949ab3206a1e23fa4aec8b'
2024-09-07 00:59:57,742 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-07 00:59:57,746 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 445 (Bump gateway) f9d5c87518fbe8273e949ab3206a1e23fa4aec8b'
2024-09-07 00:59:57,797 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-07 00:59:57,800 [     scc.git] DEBUG  build.gradle | 2 +-
2024-09-07 00:59:57,800 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2024-09-07 00:59:58,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-07 00:59:58,117 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-07 00:59:58,125 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-07 00:59:58,131 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 446 (Add changelog for upcoming 5.8.5 release) dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-07 00:59:58,189 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-07 00:59:58,192 [     scc.git] DEBUG  CHANGELOG.md | 10 +++++++++-
2024-09-07 00:59:58,192 [     scc.git] DEBUG  1 file changed, 9 insertions(+), 1 deletion(-)
2024-09-07 00:59:58,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-07 00:59:58,495 [     scc.git] DEBUG Calling 'git submodule update'
2024-09-07 00:59:58,538 [     scc.git] DEBUG Get sha1 of %s
2024-09-07 00:59:58,538 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-07 00:59:58,544 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-09-07 00:59:58,597 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc2828afe20> has no local changes
2024-09-07 00:59:58,597 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-insight
Excluded PRs:
  - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
  - PR 437 dominikl 'Remove apache commons io' (stage: draft)
  - PR 436 dominikl 'Update apache common libs' (exclude comment)
  - PR 377 sukunis 'Fix ontology loads' (exclude comment)
  - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
  - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
Already up to date.

Merged PRs:
  - PR 385 jburel 'handle case where ROI is not longer in table'
  - PR 442 dominikl 'Remove duplicate app_name parameter'
  - PR 444 jburel 'fix endpoint'
  - PR 445 dominikl 'Bump gateway'
  - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'

Generated by OMERO-insight-push#165 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/165/)'
2024-09-07 00:59:58,611 [     scc.git] DEBUG [detached HEAD 2252f0c37] merge master -Dorg -Snone
2024-09-07 00:59:58,612 [   scc.merge] INFO  Repository: ome/omero-insight
2024-09-07 00:59:58,612 [   scc.merge] INFO  Excluded PRs:
2024-09-07 00:59:58,612 [   scc.merge] INFO    - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
2024-09-07 00:59:58,612 [   scc.merge] INFO    - PR 437 dominikl 'Remove apache commons io' (stage: draft)
2024-09-07 00:59:58,612 [   scc.merge] INFO    - PR 436 dominikl 'Update apache common libs' (exclude comment)
2024-09-07 00:59:58,612 [   scc.merge] INFO    - PR 377 sukunis 'Fix ontology loads' (exclude comment)
2024-09-07 00:59:58,612 [   scc.merge] INFO    - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
2024-09-07 00:59:58,612 [   scc.merge] INFO    - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
2024-09-07 00:59:58,612 [   scc.merge] INFO  Already up to date.
2024-09-07 00:59:58,612 [   scc.merge] INFO  
2024-09-07 00:59:58,612 [   scc.merge] INFO  Merged PRs:
2024-09-07 00:59:58,612 [   scc.merge] INFO    - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-07 00:59:58,612 [   scc.merge] INFO    - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-07 00:59:58,612 [   scc.merge] INFO    - PR 444 jburel 'fix endpoint'
2024-09-07 00:59:58,612 [   scc.merge] INFO    - PR 445 dominikl 'Bump gateway'
2024-09-07 00:59:58,612 [   scc.merge] INFO    - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-07 00:59:58,612 [   scc.merge] INFO  
2024-09-07 00:59:58,612 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-09-07 00:59:58,612 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2024-09-07 00:59:59,145 [  scc.config] DEBUG Found github.token
2024-09-07 00:59:59,150 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-09-07 00:59:59,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-07 00:59:59,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-07 01:00:00,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-09-07 01:00:00,074 [      scc.gh] DEBUG 2380 remaining from 5000 (Reset at 01:09
2024-09-07 01:00:00,075 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-07 01:00:00,081 [     scc.git] DEBUG Check current status
2024-09-07 01:00:00,081 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-07 01:00:00,085 [     scc.git] DEBUG 2252f0c37 merge master -Dorg -Snone
2024-09-07 01:00:00,086 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-07 01:00:00,138 [  scc.config] DEBUG Found remote.origin.url
2024-09-07 01:00:00,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None
2024-09-07 01:00:00,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-07 01:00:01,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-07 01:00:01,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-07 01:00:02,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-07 01:00:02,212 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-07 01:00:02,256 [     scc.git] DEBUG Resetting...
2024-09-07 01:00:02,256 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-09-07 01:00:02,274 [     scc.git] DEBUG HEAD is now at 2252f0c37 merge master -Dorg -Snone
2024-09-07 01:00:02,275 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-09-07 01:00:02,320 [     scc.git] DEBUG Check current status
2024-09-07 01:00:02,320 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-07 01:00:02,327 [     scc.git] DEBUG 2252f0c37 merge master -Dorg -Snone
2024-09-07 01:00:02,327 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-07 01:00:02,375 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-09-07 01:00:02,375 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-09-07 01:00:02,375 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-09-07 01:00:02,375 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-09-07 01:00:02,376 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-09-07 01:00:02,376 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2024-09-07 01:00:02,376 [    scc.repo] DEBUG ## PRs found:
2024-09-07 01:00:02,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None
2024-09-07 01:00:03,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/446 HTTP/1.1" 200 None
2024-09-07 01:00:03,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93 HTTP/1.1" 200 None
2024-09-07 01:00:04,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-07 01:00:04,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-07 01:00:05,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93 HTTP/1.1" 200 None
2024-09-07 01:00:05,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/dff7f109472118e0a3ef88bf89467402d9cbfa93?per_page=1 HTTP/1.1" 200 None
2024-09-07 01:00:06,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93 HTTP/1.1" 200 None
2024-09-07 01:00:06,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93/status HTTP/1.1" 200 None
2024-09-07 01:00:06,553 [    scc.repo] DEBUG   - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-07 01:00:07,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445 HTTP/1.1" 200 None
2024-09-07 01:00:07,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445/comments HTTP/1.1" 200 None
2024-09-07 01:00:08,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f9d5c87518fbe8273e949ab3206a1e23fa4aec8b HTTP/1.1" 200 None
2024-09-07 01:00:08,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f9d5c87518fbe8273e949ab3206a1e23fa4aec8b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-07 01:00:08,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f9d5c87518fbe8273e949ab3206a1e23fa4aec8b/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-07 01:00:09,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444 HTTP/1.1" 200 None
2024-09-07 01:00:09,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444/comments HTTP/1.1" 200 None
2024-09-07 01:00:10,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b HTTP/1.1" 200 None
2024-09-07 01:00:10,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-07 01:00:11,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-07 01:00:11,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b HTTP/1.1" 200 None
2024-09-07 01:00:12,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/2c097b44fcac5cd272b1c0a05a7336d988b5c65b?per_page=1 HTTP/1.1" 200 None
2024-09-07 01:00:12,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b HTTP/1.1" 200 None
2024-09-07 01:00:13,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b/status HTTP/1.1" 200 None
2024-09-07 01:00:13,088 [    scc.repo] DEBUG   - PR 444 jburel 'fix endpoint'
2024-09-07 01:00:13,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443 HTTP/1.1" 200 None
2024-09-07 01:00:13,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442 HTTP/1.1" 200 None
2024-09-07 01:00:14,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442/comments HTTP/1.1" 200 None
2024-09-07 01:00:14,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861 HTTP/1.1" 200 None
2024-09-07 01:00:15,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-07 01:00:15,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-07 01:00:16,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861 HTTP/1.1" 200 None
2024-09-07 01:00:16,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/9f3d273acb87527eed99aedd868bf0a4ec1b5861?per_page=1 HTTP/1.1" 200 None
2024-09-07 01:00:17,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861 HTTP/1.1" 200 None
2024-09-07 01:00:17,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861/status HTTP/1.1" 200 None
2024-09-07 01:00:17,748 [    scc.repo] DEBUG   - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-07 01:00:18,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/437 HTTP/1.1" 200 None
2024-09-07 01:00:18,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436 HTTP/1.1" 200 None
2024-09-07 01:00:19,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436/comments HTTP/1.1" 200 None
2024-09-07 01:00:19,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385 HTTP/1.1" 200 None
2024-09-07 01:00:19,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385/comments HTTP/1.1" 200 None
2024-09-07 01:00:20,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-09-07 01:00:20,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-07 01:00:21,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-07 01:00:21,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-09-07 01:00:22,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/9466472925265b0b02b7c054c55d62705a9b8215?per_page=1 HTTP/1.1" 200 None
2024-09-07 01:00:22,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-09-07 01:00:23,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/status HTTP/1.1" 200 None
2024-09-07 01:00:23,109 [    scc.repo] DEBUG   - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-07 01:00:23,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333 HTTP/1.1" 200 None
2024-09-07 01:00:23,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333/comments HTTP/1.1" 200 None
2024-09-07 01:00:24,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310 HTTP/1.1" 200 None
2024-09-07 01:00:24,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310/comments HTTP/1.1" 200 None
2024-09-07 01:00:24,914 [    scc.repo] DEBUG ## Branches found:
2024-09-07 01:00:24,914 [     scc.git] DEBUG Get sha1 of %s
2024-09-07 01:00:24,914 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-07 01:00:24,919 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-07 01:00:24,923 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-07 01:00:24,923 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-07 01:00:24,928 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-07 01:00:24,934 [     scc.git] DEBUG Already up to date.

2024-09-07 01:00:24,934 [     scc.git] DEBUG Calling 'git fetch origin pull/385/head'
2024-09-07 01:00:25,265 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-07 01:00:25,265 [     scc.git] DEBUG  * branch                refs/pull/385/head -> FETCH_HEAD
2024-09-07 01:00:25,272 [     scc.git] DEBUG Calling 'git fetch origin pull/442/head'
2024-09-07 01:00:25,588 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-07 01:00:25,588 [     scc.git] DEBUG  * branch                refs/pull/442/head -> FETCH_HEAD
2024-09-07 01:00:25,594 [     scc.git] DEBUG Calling 'git fetch origin pull/444/head'
2024-09-07 01:00:25,878 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-07 01:00:25,878 [     scc.git] DEBUG  * branch                refs/pull/444/head -> FETCH_HEAD
2024-09-07 01:00:25,885 [     scc.git] DEBUG Calling 'git fetch origin pull/446/head'
2024-09-07 01:00:26,168 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-07 01:00:26,168 [     scc.git] DEBUG  * branch                refs/pull/446/head -> FETCH_HEAD
2024-09-07 01:00:26,173 [     scc.git] DEBUG ## Unique users: []
2024-09-07 01:00:26,173 [     scc.git] DEBUG Get sha1 of %s
2024-09-07 01:00:26,173 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-07 01:00:26,178 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-07 01:00:26,185 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-07 01:00:26,189 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 385 (handle case where ROI is not longer in table) 9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-07 01:00:26,195 [     scc.git] DEBUG Already up to date.
2024-09-07 01:00:26,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-07 01:00:26,333 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-07 01:00:26,339 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-07 01:00:26,344 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 442 (Remove duplicate app_name parameter) 9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-07 01:00:26,351 [     scc.git] DEBUG Already up to date.
2024-09-07 01:00:26,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-07 01:00:26,738 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-07 01:00:26,745 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-07 01:00:26,751 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 444 (fix endpoint) 2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-07 01:00:26,757 [     scc.git] DEBUG Already up to date.
2024-09-07 01:00:27,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-07 01:00:27,144 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-07 01:00:27,150 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-07 01:00:27,154 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 446 (Add changelog for upcoming 5.8.5 release) dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-07 01:00:27,159 [     scc.git] DEBUG Already up to date.
2024-09-07 01:00:27,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-07 01:00:27,532 [     scc.git] DEBUG Calling 'git submodule update'
2024-09-07 01:00:27,576 [     scc.git] DEBUG Get sha1 of %s
2024-09-07 01:00:27,576 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-07 01:00:27,580 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-07 01:00:27,628 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-09-07 01:00:27,640 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7ff3c2d53e20> has no local changes
2024-09-07 01:00:27,640 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-insight
Excluded PRs:
  - PR 445 dominikl 'Bump gateway' (status: cancelled)
  - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
  - PR 437 dominikl 'Remove apache commons io' (stage: draft)
  - PR 436 dominikl 'Update apache common libs' (exclude comment)
  - PR 377 sukunis 'Fix ontology loads' (exclude comment)
  - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
  - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
Already up to date.

Merged PRs:
  - PR 385 jburel 'handle case where ROI is not longer in table'
  - PR 442 dominikl 'Remove duplicate app_name parameter'
  - PR 444 jburel 'fix endpoint'
  - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'

Generated by OMERO-insight-push#165 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/165/)'
2024-09-07 01:00:27,655 [     scc.git] DEBUG [detached HEAD d0c40ddee] merge master -Dorg -Ssuccess-only
2024-09-07 01:00:27,656 [   scc.merge] INFO  Repository: ome/omero-insight
2024-09-07 01:00:27,656 [   scc.merge] INFO  Excluded PRs:
2024-09-07 01:00:27,656 [   scc.merge] INFO    - PR 445 dominikl 'Bump gateway' (status: cancelled)
2024-09-07 01:00:27,656 [   scc.merge] INFO    - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
2024-09-07 01:00:27,656 [   scc.merge] INFO    - PR 437 dominikl 'Remove apache commons io' (stage: draft)
2024-09-07 01:00:27,656 [   scc.merge] INFO    - PR 436 dominikl 'Update apache common libs' (exclude comment)
2024-09-07 01:00:27,656 [   scc.merge] INFO    - PR 377 sukunis 'Fix ontology loads' (exclude comment)
2024-09-07 01:00:27,656 [   scc.merge] INFO    - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
2024-09-07 01:00:27,656 [   scc.merge] INFO    - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
2024-09-07 01:00:27,656 [   scc.merge] INFO  Already up to date.
2024-09-07 01:00:27,656 [   scc.merge] INFO  
2024-09-07 01:00:27,656 [   scc.merge] INFO  Merged PRs:
2024-09-07 01:00:27,656 [   scc.merge] INFO    - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-07 01:00:27,656 [   scc.merge] INFO    - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-07 01:00:27,656 [   scc.merge] INFO    - PR 444 jburel 'fix endpoint'
2024-09-07 01:00:27,656 [   scc.merge] INFO    - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-07 01:00:27,656 [   scc.merge] INFO  
2024-09-07 01:00:27,657 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-09-07 01:00:27,657 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.9.3 to 5.9.4-SNAPSHOT
Commit all component version changes
[detached HEAD 7dc318f9f] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2024-09-07 01:00:33,570 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-insight/tree/merge_ci